Query 004120
Match_columns 773
No_of_seqs 452 out of 2111
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 14:55:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f9i_A Acetyl-coenzyme A carbo 100.0 8.9E-71 3E-75 588.8 28.1 316 93-408 11-326 (327)
2 2f9y_A Acetyl-COA carboxylase, 100.0 3.9E-70 1.3E-74 586.3 21.5 315 92-406 21-338 (339)
3 1on3_A Methylmalonyl-COA carbo 100.0 1.6E-48 5.5E-53 439.0 24.0 289 46-379 154-504 (523)
4 2bzr_A Propionyl-COA carboxyla 100.0 2E-47 7E-52 431.8 25.1 290 46-380 167-530 (548)
5 1vrg_A Propionyl-COA carboxyla 100.0 8E-47 2.7E-51 425.6 25.1 289 46-379 157-508 (527)
6 3n6r_B Propionyl-COA carboxyla 100.0 1.8E-46 6.1E-51 422.2 25.3 291 46-381 164-514 (531)
7 1pix_A Glutaconyl-COA decarbox 100.0 2.9E-47 1E-51 433.2 18.4 311 45-381 166-559 (587)
8 3iav_A Propionyl-COA carboxyla 100.0 2.4E-45 8.2E-50 413.2 24.8 302 46-382 156-514 (530)
9 1x0u_A Hypothetical methylmalo 100.0 1E-45 3.6E-50 416.3 19.6 290 46-380 150-504 (522)
10 3gf3_A Glutaconyl-COA decarbox 100.0 4.8E-45 1.6E-49 414.4 22.9 328 44-398 166-579 (588)
11 3u9r_B MCC beta, methylcrotony 100.0 1.2E-42 4.2E-47 392.5 26.9 299 45-382 182-541 (555)
12 2x24_A Acetyl-COA carboxylase; 100.0 5.7E-40 2E-44 381.2 20.3 289 59-384 258-671 (793)
13 3k8x_A Acetyl-COA carboxylase; 100.0 6.6E-38 2.3E-42 361.4 20.4 250 59-330 245-564 (758)
14 2f9i_B Acetyl-coenzyme A carbo 100.0 5.1E-37 1.8E-41 322.9 17.1 226 131-380 29-279 (285)
15 2f9y_B Acetyl-coenzyme A carbo 100.0 7E-33 2.4E-37 293.8 17.9 211 131-356 23-261 (304)
16 1pix_A Glutaconyl-COA decarbox 100.0 3.6E-30 1.2E-34 293.2 13.0 193 143-357 58-270 (587)
17 3u9r_B MCC beta, methylcrotony 100.0 1.8E-27 6.1E-32 269.2 25.3 221 97-357 33-270 (555)
18 1vrg_A Propionyl-COA carboxyla 99.9 2E-26 6.7E-31 260.1 23.7 186 143-357 44-243 (527)
19 3gf3_A Glutaconyl-COA decarbox 99.9 1E-26 3.4E-31 264.6 17.1 192 98-322 23-224 (588)
20 3n6r_B Propionyl-COA carboxyla 99.9 1.6E-25 5.6E-30 252.3 24.0 181 143-357 51-250 (531)
21 3iav_A Propionyl-COA carboxyla 99.9 2.2E-25 7.7E-30 251.3 24.6 188 143-357 43-242 (530)
22 2bzr_A Propionyl-COA carboxyla 99.9 1.1E-24 3.9E-29 246.6 24.5 187 143-357 54-253 (548)
23 1on3_A Methylmalonyl-COA carbo 99.9 1.7E-24 5.9E-29 244.1 23.5 187 143-357 41-239 (523)
24 1x0u_A Hypothetical methylmalo 99.9 4E-24 1.4E-28 241.2 25.1 188 142-357 36-237 (522)
25 2x24_A Acetyl-COA carboxylase; 99.9 3.9E-22 1.3E-26 232.3 12.8 189 154-357 70-332 (793)
26 3k8x_A Acetyl-COA carboxylase; 99.8 9.9E-18 3.4E-22 194.3 19.0 163 182-357 82-319 (758)
27 2a7k_A CARB; crotonase, antibi 98.8 9.1E-08 3.1E-12 97.9 18.2 160 220-393 21-203 (250)
28 3viv_A 441AA long hypothetical 98.8 2E-08 6.8E-13 103.0 12.8 127 221-357 17-173 (230)
29 2fbm_A Y chromosome chromodoma 98.8 1.3E-07 4.5E-12 99.5 17.7 160 221-393 46-229 (291)
30 2f6q_A Peroxisomal 3,2-trans-e 98.8 1.3E-07 4.6E-12 98.6 17.6 160 220-393 47-231 (280)
31 3hrx_A Probable enoyl-COA hydr 98.8 1.3E-07 4.3E-12 97.1 16.9 162 220-394 21-202 (254)
32 2gtr_A CDY-like, chromodomain 98.8 1.3E-07 4.5E-12 97.4 16.9 160 221-393 28-211 (261)
33 3r6h_A Enoyl-COA hydratase, EC 98.8 1.3E-07 4.5E-12 96.1 16.6 160 221-394 26-206 (233)
34 3gow_A PAAG, probable enoyl-CO 98.8 1.5E-07 5.3E-12 96.6 16.8 162 220-394 21-202 (254)
35 1dci_A Dienoyl-COA isomerase; 98.8 1.4E-07 4.6E-12 97.9 16.5 162 220-393 25-219 (275)
36 3i47_A Enoyl COA hydratase/iso 98.8 1.4E-07 4.9E-12 97.9 16.6 163 220-396 25-211 (268)
37 3lke_A Enoyl-COA hydratase; ny 98.8 1.6E-07 5.5E-12 97.1 16.7 162 220-393 25-212 (263)
38 3pea_A Enoyl-COA hydratase/iso 98.7 1.6E-07 5.5E-12 96.9 16.3 160 221-393 27-208 (261)
39 1uiy_A Enoyl-COA hydratase; ly 98.7 4.9E-07 1.7E-11 92.7 19.4 138 220-358 20-181 (253)
40 3isa_A Putative enoyl-COA hydr 98.7 2.8E-07 9.5E-12 94.8 17.6 159 220-394 28-206 (254)
41 3kqf_A Enoyl-COA hydratase/iso 98.7 1.4E-07 4.7E-12 97.7 15.1 161 220-393 30-212 (265)
42 3fdu_A Putative enoyl-COA hydr 98.7 2E-07 6.9E-12 96.6 16.2 159 220-393 26-207 (266)
43 3qk8_A Enoyl-COA hydratase ECH 98.7 1E-07 3.5E-12 99.1 13.8 161 220-393 34-217 (272)
44 3p5m_A Enoyl-COA hydratase/iso 98.7 1E-07 3.4E-12 98.2 13.6 161 220-393 27-202 (255)
45 3rrv_A Enoyl-COA hydratase/iso 98.7 3.7E-07 1.3E-11 95.2 17.9 137 220-356 49-208 (276)
46 4di1_A Enoyl-COA hydratase ECH 98.7 2.3E-07 8E-12 97.0 16.2 138 221-358 45-203 (277)
47 1ef8_A Methylmalonyl COA decar 98.7 1.8E-07 6.2E-12 96.4 15.0 161 220-393 25-206 (261)
48 3g64_A Putative enoyl-COA hydr 98.7 2.2E-07 7.5E-12 96.8 15.7 161 220-393 38-224 (279)
49 3qmj_A Enoyl-COA hydratase, EC 98.7 1.1E-07 3.7E-12 97.7 13.1 162 220-395 27-211 (256)
50 2vx2_A Enoyl-COA hydratase dom 98.7 5.2E-07 1.8E-11 94.6 18.4 160 220-393 54-235 (287)
51 3oc7_A Enoyl-COA hydratase; se 98.7 2.2E-07 7.5E-12 96.1 15.4 158 220-393 32-215 (267)
52 3l3s_A Enoyl-COA hydratase/iso 98.7 4.8E-07 1.7E-11 93.5 17.8 161 221-395 28-215 (263)
53 3hin_A Putative 3-hydroxybutyr 98.7 1.4E-07 4.8E-12 98.5 13.9 160 220-393 37-216 (275)
54 1y7o_A ATP-dependent CLP prote 98.7 5.3E-08 1.8E-12 98.7 10.2 135 214-358 45-212 (218)
55 2ej5_A Enoyl-COA hydratase sub 98.7 1.6E-07 5.5E-12 96.6 13.9 161 220-393 24-204 (257)
56 1sg4_A 3,2-trans-enoyl-COA iso 98.7 3.3E-07 1.1E-11 94.5 16.2 159 221-393 26-209 (260)
57 4fzw_C 1,2-epoxyphenylacetyl-C 98.7 4.1E-07 1.4E-11 94.7 16.9 161 220-393 36-221 (274)
58 3myb_A Enoyl-COA hydratase; ss 98.7 6.5E-07 2.2E-11 93.9 18.5 137 220-357 47-205 (286)
59 3ot6_A Enoyl-COA hydratase/iso 98.7 4.3E-07 1.5E-11 92.3 16.5 159 221-394 27-206 (232)
60 1nzy_A Dehalogenase, 4-chlorob 98.7 2.6E-07 8.9E-12 95.6 15.0 161 220-393 24-210 (269)
61 3rsi_A Putative enoyl-COA hydr 98.7 2.7E-07 9.4E-12 95.3 14.9 161 220-393 30-212 (265)
62 4fzw_A 2,3-dehydroadipyl-COA h 98.7 1.6E-07 5.5E-12 96.9 13.0 162 220-394 26-206 (258)
63 3sll_A Probable enoyl-COA hydr 98.7 3.7E-07 1.3E-11 95.8 16.0 160 220-393 45-234 (290)
64 2pbp_A Enoyl-COA hydratase sub 98.6 2.5E-07 8.4E-12 95.2 13.5 160 220-393 26-205 (258)
65 3he2_A Enoyl-COA hydratase ECH 98.6 4.2E-07 1.4E-11 94.5 15.3 157 220-393 42-213 (264)
66 2ppy_A Enoyl-COA hydratase; be 98.6 4.2E-07 1.4E-11 93.9 14.9 160 221-393 30-212 (265)
67 1wz8_A Enoyl-COA hydratase; ly 98.6 4.5E-07 1.5E-11 93.7 14.9 161 220-393 31-214 (264)
68 3pe8_A Enoyl-COA hydratase; em 98.6 1.1E-07 3.8E-12 98.2 10.2 138 220-358 30-180 (256)
69 2q35_A CURF; crotonase, lyase; 98.6 5.1E-07 1.8E-11 92.3 14.8 161 220-393 24-200 (243)
70 2j5i_A P-hydroxycinnamoyl COA 98.6 5.6E-07 1.9E-11 93.7 15.1 161 220-393 30-216 (276)
71 4f47_A Enoyl-COA hydratase ECH 98.6 3.2E-07 1.1E-11 95.4 12.8 139 220-358 41-203 (278)
72 1szo_A 6-oxocamphor hydrolase; 98.6 1.1E-06 3.7E-11 90.7 16.6 158 222-393 39-218 (257)
73 3hp0_A Putative polyketide bio 98.6 5E-07 1.7E-11 93.9 14.1 158 220-393 28-207 (267)
74 2f6i_A ATP-dependent CLP prote 98.6 9.1E-08 3.1E-12 97.0 8.1 132 218-359 43-204 (215)
75 1pjh_A Enoyl-COA isomerase; EC 98.6 9.3E-07 3.2E-11 92.1 15.7 169 220-395 30-231 (280)
76 3moy_A Probable enoyl-COA hydr 98.6 2E-07 6.8E-12 96.5 10.5 139 220-358 31-188 (263)
77 3m6n_A RPFF protein; enoyl-COA 98.5 1.6E-06 5.5E-11 91.6 17.4 137 222-358 59-228 (305)
78 3tlf_A Enoyl-COA hydratase/iso 98.5 2.9E-07 1E-11 95.4 11.5 160 220-393 32-221 (274)
79 2cby_A ATP-dependent CLP prote 98.5 1.7E-07 5.7E-12 94.3 9.0 131 218-358 31-192 (208)
80 3h81_A Enoyl-COA hydratase ECH 98.5 3.4E-07 1.2E-11 95.7 11.2 160 220-393 46-225 (278)
81 3h0u_A Putative enoyl-COA hydr 98.5 4.5E-07 1.5E-11 95.3 12.2 162 221-395 29-216 (289)
82 2j5g_A ALR4455 protein; enzyme 98.5 1.6E-06 5.6E-11 89.9 16.0 158 222-393 47-227 (263)
83 3njd_A Enoyl-COA hydratase; ss 98.5 7.1E-07 2.4E-11 95.4 13.6 162 220-397 56-268 (333)
84 3qre_A Enoyl-COA hydratase, EC 98.5 5E-07 1.7E-11 95.4 12.2 139 220-358 51-218 (298)
85 3gkb_A Putative enoyl-COA hydr 98.5 4.9E-07 1.7E-11 94.9 11.0 160 221-393 30-217 (287)
86 3trr_A Probable enoyl-COA hydr 98.5 1.6E-06 5.6E-11 89.3 14.6 160 220-393 28-203 (256)
87 3swx_A Probable enoyl-COA hydr 98.5 3E-07 1E-11 95.0 9.2 139 220-358 30-190 (265)
88 1hzd_A AUH, AU-binding protein 98.5 5.8E-07 2E-11 93.3 11.4 139 220-358 33-193 (272)
89 3t89_A 1,4-dihydroxy-2-naphtho 98.5 1.1E-06 3.8E-11 92.3 13.5 160 220-393 49-233 (289)
90 3t8b_A 1,4-dihydroxy-2-naphtho 98.5 6.1E-07 2.1E-11 96.4 11.6 160 220-393 78-278 (334)
91 3r9q_A Enoyl-COA hydratase/iso 98.4 3.9E-07 1.3E-11 94.4 9.1 162 220-394 32-212 (262)
92 3qxi_A Enoyl-COA hydratase ECH 98.4 1.8E-06 6.2E-11 89.4 14.1 161 220-394 36-213 (265)
93 2uzf_A Naphthoate synthase; ly 98.4 6.6E-07 2.3E-11 93.0 10.8 138 220-357 34-194 (273)
94 3t3w_A Enoyl-COA hydratase; ss 98.4 7.6E-06 2.6E-10 85.3 18.5 159 220-393 41-225 (279)
95 1mj3_A Enoyl-COA hydratase, mi 98.4 3.7E-07 1.3E-11 94.1 8.5 139 220-358 28-185 (260)
96 4eml_A Naphthoate synthase; 1, 98.4 9.1E-07 3.1E-11 92.2 11.5 160 220-393 31-219 (275)
97 3lao_A Enoyl-COA hydratase/iso 98.4 3.1E-07 1.1E-11 94.6 7.8 161 220-393 33-215 (258)
98 1tg6_A Putative ATP-dependent 98.4 4.5E-07 1.5E-11 95.5 9.0 136 213-358 81-247 (277)
99 3r9t_A ECHA1_1; ssgcid, seattl 98.4 2.3E-06 7.8E-11 88.8 12.8 162 220-395 30-213 (267)
100 4hdt_A 3-hydroxyisobutyryl-COA 98.4 3.9E-06 1.3E-10 90.6 15.0 154 195-358 14-192 (353)
101 3p2l_A ATP-dependent CLP prote 98.4 1.6E-06 5.6E-11 87.1 11.2 135 214-358 30-195 (201)
102 3qwd_A ATP-dependent CLP prote 98.3 2.3E-06 7.8E-11 86.2 11.7 136 214-359 27-193 (203)
103 1yg6_A ATP-dependent CLP prote 98.3 7.8E-07 2.7E-11 88.2 7.2 130 218-357 30-190 (193)
104 3bpt_A 3-hydroxyisobutyryl-COA 98.3 1.4E-05 4.9E-10 86.4 17.5 138 220-358 27-189 (363)
105 3qxz_A Enoyl-COA hydratase/iso 98.3 5.3E-07 1.8E-11 93.3 5.4 137 220-357 28-185 (265)
106 3ju1_A Enoyl-COA hydratase/iso 98.3 1.3E-05 4.4E-10 88.3 16.5 138 220-358 63-229 (407)
107 3bf0_A Protease 4; bacterial, 98.1 3.2E-06 1.1E-10 97.0 7.6 88 223-317 319-408 (593)
108 2w3p_A Benzoyl-COA-dihydrodiol 98.1 1.5E-05 5.3E-10 90.6 12.6 161 220-393 52-244 (556)
109 3rst_A Signal peptide peptidas 98.0 9.2E-06 3.2E-10 83.0 7.8 82 228-316 31-115 (240)
110 1wdk_A Fatty oxidation complex 98.0 5.8E-05 2E-09 88.4 15.4 136 221-357 30-190 (715)
111 3zwc_A Peroxisomal bifunctiona 97.9 4E-05 1.4E-09 90.3 12.0 156 193-358 24-194 (742)
112 2np9_A DPGC; protein inhibitor 97.9 3.4E-05 1.2E-09 85.9 10.3 137 220-357 188-370 (440)
113 4gm2_A ATP-dependent CLP prote 97.8 2.9E-05 9.8E-10 78.6 7.8 145 213-357 27-203 (205)
114 2wtb_A MFP2, fatty acid multif 97.6 0.00013 4.4E-09 85.7 9.3 136 221-357 29-189 (725)
115 3bf0_A Protease 4; bacterial, 97.2 0.00052 1.8E-08 78.8 8.7 85 226-318 70-157 (593)
116 2f9i_B Acetyl-coenzyme A carbo 93.8 0.0037 1.3E-07 66.0 -3.6 73 46-141 180-261 (285)
117 3s84_A Apolipoprotein A-IV; fo 89.3 3.9 0.00013 42.8 13.1 13 436-448 19-31 (273)
118 3vkg_A Dynein heavy chain, cyt 71.9 25 0.00084 48.2 13.8 19 606-624 1989-2007(3245)
119 1i84_S Smooth muscle myosin he 71.5 3.5 0.00012 51.0 5.5 16 436-451 861-876 (1184)
120 1s94_A S-syntaxin; three helix 66.4 25 0.00084 33.9 9.3 36 648-689 77-112 (180)
121 2dfs_A Myosin-5A; myosin-V, in 63.0 46 0.0016 41.1 12.8 6 45-50 257-262 (1080)
122 3ghg_A Fibrinogen alpha chain; 62.2 88 0.003 35.8 13.7 35 649-686 114-148 (562)
123 1i84_S Smooth muscle myosin he 61.4 17 0.00058 45.0 8.8 20 434-453 852-871 (1184)
124 3vkg_A Dynein heavy chain, cyt 60.8 78 0.0027 43.5 15.2 20 699-718 2092-2111(3245)
125 3ghg_A Fibrinogen alpha chain; 59.7 28 0.00095 39.7 9.2 52 599-667 109-160 (562)
126 2f9y_B Acetyl-coenzyme A carbo 53.2 1.4 4.6E-05 46.9 -2.4 48 45-104 176-232 (304)
127 3r2p_A Apolipoprotein A-I; amp 51.0 26 0.00089 34.1 6.5 30 558-593 79-108 (185)
128 3na7_A HP0958; flagellar bioge 50.1 2.2E+02 0.0075 28.9 17.3 13 718-730 175-187 (256)
129 2dfs_A Myosin-5A; myosin-V, in 47.4 1.1E+02 0.0037 37.8 12.5 14 243-256 430-443 (1080)
130 3vqt_A RF-3, peptide chain rel 46.9 9.9 0.00034 43.1 3.2 90 199-288 32-160 (548)
131 1gs9_A Apolipoprotein E, APOE4 45.8 1.4E+02 0.0048 28.8 10.7 67 558-630 47-114 (165)
132 1deq_A Fibrinogen (alpha chain 45.5 87 0.003 34.4 9.9 18 649-666 117-134 (390)
133 1ez3_A Syntaxin-1A; three heli 44.2 1.7E+02 0.0059 26.0 10.7 37 646-688 44-80 (127)
134 1s94_A S-syntaxin; three helix 42.6 1.2E+02 0.0041 29.0 9.7 59 554-618 78-144 (180)
135 1t3j_A Mitofusin 1; coiled coi 42.1 19 0.00063 32.5 3.5 58 616-686 30-88 (96)
136 2yy0_A C-MYC-binding protein; 42.1 25 0.00084 28.3 3.9 25 676-708 19-43 (53)
137 1lq7_A Alpha3W; three helix bu 41.3 58 0.002 26.6 5.9 12 660-671 36-47 (67)
138 3s84_A Apolipoprotein A-IV; fo 41.0 3.3E+02 0.011 28.3 18.6 70 673-743 180-256 (273)
139 2a01_A Apolipoprotein A-I; fou 38.9 1.7E+02 0.0059 29.6 10.6 160 512-688 71-239 (243)
140 1use_A VAsp, vasodilator-stimu 38.0 32 0.0011 27.1 3.8 36 557-593 7-42 (45)
141 1nfn_A Apolipoprotein E3; lipi 36.2 2.7E+02 0.0091 27.4 11.2 53 650-708 93-145 (191)
142 1deq_A Fibrinogen (alpha chain 35.7 1.2E+02 0.004 33.5 9.0 35 651-685 87-129 (390)
143 1gs9_A Apolipoprotein E, APOE4 33.6 2.1E+02 0.007 27.7 9.7 54 651-710 94-147 (165)
144 3pev_B Nucleoporin GLE1; RECA, 33.1 28 0.00097 36.9 3.8 58 674-731 15-73 (297)
145 2lem_A Apolipoprotein A-I; lip 32.3 28 0.00097 34.8 3.5 161 518-711 36-204 (216)
146 4dvy_P Cytotoxicity-associated 32.2 1.1E+02 0.0038 35.2 8.4 33 653-685 719-751 (876)
147 1nfn_A Apolipoprotein E3; lipi 31.9 1.8E+02 0.0061 28.6 9.1 14 562-575 56-69 (191)
148 2oto_A M protein; helical coil 30.7 2.8E+02 0.0097 26.1 10.0 21 708-731 134-154 (155)
149 1ez3_A Syntaxin-1A; three heli 28.9 3.1E+02 0.01 24.3 10.7 72 648-733 8-79 (127)
150 3oja_B Anopheles plasmodium-re 28.8 2.6E+02 0.0088 31.0 10.9 12 675-686 557-568 (597)
151 1fio_A SSO1 protein; four heli 26.9 1.7E+02 0.0058 27.9 7.9 55 648-712 5-63 (196)
152 2lf0_A Uncharacterized protein 26.1 77 0.0026 29.6 4.8 48 560-617 6-53 (123)
153 3na7_A HP0958; flagellar bioge 25.5 5.3E+02 0.018 26.0 15.6 9 652-660 97-105 (256)
154 1use_A VAsp, vasodilator-stimu 24.8 66 0.0022 25.3 3.5 12 491-502 32-43 (45)
155 3hnw_A Uncharacterized protein 24.0 1.6E+02 0.0055 27.7 6.8 21 556-576 27-47 (138)
156 3mq9_A Bone marrow stromal ant 24.0 7E+02 0.024 26.8 13.2 26 555-580 371-396 (471)
157 1m1j_A Fibrinogen alpha subuni 23.3 3.2E+02 0.011 30.8 9.9 18 696-713 144-161 (491)
158 2l7b_A Apolipoprotein E, APO-E 22.9 2.2E+02 0.0077 30.1 8.5 145 512-712 119-274 (307)
159 3sja_C Golgi to ER traffic pro 22.9 63 0.0022 27.2 3.3 36 488-523 12-48 (65)
160 4dvz_A Cytotoxicity-associated 22.9 7.3E+02 0.025 27.7 12.3 46 197-242 100-152 (569)
161 1lq7_A Alpha3W; three helix bu 22.1 2.9E+02 0.01 22.5 6.9 36 579-617 7-42 (67)
162 3f1i_H Hepatocyte growth facto 20.8 1E+02 0.0034 27.9 4.4 51 507-565 45-95 (98)
No 1
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=8.9e-71 Score=588.84 Aligned_cols=316 Identities=49% Similarity=0.772 Sum_probs=298.4
Q ss_pred CCcccccccchHhHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHhhhhhcCCCChhHHhhhcCCCCCCchhhhhhhhhh
Q 004120 93 KPVTLDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITE 172 (773)
Q Consensus 93 ~~~~LdFEkPIvel~~ki~~l~~la~~~giDlseEIq~LE~KleeL~kdI~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~D 172 (773)
++.|||||+||.+|++||++|+.+....++|++++|..+|.+..++.+++|++|+||+|+++++||+|||.+++|..+||
T Consensus 11 ~~~~~~fe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~re~I~~l~D 90 (327)
T 2f9i_A 11 RGSMLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFD 90 (327)
T ss_dssp SSCCCGGGHHHHHHHHHHHCC-----------CTTHHHHHHHHHHHHHHHHHSCCHHHHHHHHTBTTSCCHHHHHHHHCE
T ss_pred CCCCCchhhHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCChhhcccccCCCCCCCHHHHHHHhcc
Confidence 46899999999999999999999987778999999999999999999999999999999999999999999999999999
Q ss_pred hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCC
Q 004120 173 KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTP 252 (773)
Q Consensus 173 dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTp 252 (773)
+|+|++|++.|+||++||||+|+|+|+||+|||||++.++++++.++||+++|++|+|++|+|++|+++++|||+|+|||
T Consensus 91 ~f~El~~d~~~~~d~~vV~G~gri~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~ 170 (327)
T 2f9i_A 91 SFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTK 170 (327)
T ss_dssp EEEECCCCSSSCCCTTEEEEEEEETTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred ceEEecCCCCcCcccceEEEEEEECCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCC
Confidence 99999999888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeeeeCHHHHHHHhhhhccCc
Q 004120 253 GAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKAS 332 (773)
Q Consensus 253 GA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVisPEgaAsIl~rd~~~a 332 (773)
||++|.++|..||++++++++.+++.++||+|++|+|+|+|||++++++||+++|||+|+|++++|++|++++|++...+
T Consensus 171 Ga~~g~~ae~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v~~peg~a~il~~~~~~a 250 (327)
T 2f9i_A 171 GAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSVISPEGAAALLWKDSNLA 250 (327)
T ss_dssp CSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBSSCHHHHHHHHSSCGGGH
T ss_pred CCCcchhhhhhhhHHHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEeecCchHHHHHHHHHhcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hHHHHHhcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCCC
Q 004120 333 PKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQ 408 (773)
Q Consensus 333 ~eaAe~lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~~R~~k~r~~G~~~ 408 (773)
+++++...++|.++++.|+||+||+||+||||+||..+...++.+|...|..|..+++++|+++||+|||+||.|.
T Consensus 251 ~~A~e~~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~~R~~~~~~~g~~~ 326 (327)
T 2f9i_A 251 KIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYI 326 (327)
T ss_dssp HHHHHHHTCBHHHHHHTTSSSEEECCCTTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHTCCCEE
T ss_pred HHHHHHcCCCHHHHHHcCCceEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCcC
Confidence 8899989999999999999999999999999999999999999999999999999999999999999999999875
No 2
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=3.9e-70 Score=586.29 Aligned_cols=315 Identities=46% Similarity=0.744 Sum_probs=294.3
Q ss_pred CCCcccccccchHhHHHHHHHHHhhhh--hc-CCChHHHHHHHHHHHHHhhhhhcCCCChhHHhhhcCCCCCCchhhhhh
Q 004120 92 PKPVTLDFEKPLVGLSKKIMDVRKMAN--DT-GLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVF 168 (773)
Q Consensus 92 ~~~~~LdFEkPIvel~~ki~~l~~la~--~~-giDlseEIq~LE~KleeL~kdI~~~Lt~weRV~l~Rdp~RP~~~d~I~ 168 (773)
|+..|||||+||.+|++||++|+.+.. .. ++|++++|..+|.+..++.+++|++|+||+|++++|||+|||.+++|.
T Consensus 21 ~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~r~~~~r~~~rp~~re~I~ 100 (339)
T 2f9y_A 21 MSLNFLDFEQPIAELEAKIDSLTAGSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVR 100 (339)
T ss_dssp ---CCCSTTHHHHHTTTTTTC---------------CCGGGGTHHHHHTTTTHHHHTCCHHHHHHHHTCTTCCCHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHhcCCCHHHhhcccCCCCCCCHHHHHH
Confidence 334589999999999999999999875 34 799999999999999999999999999999999999999999999999
Q ss_pred hhhhhheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEE
Q 004120 169 NITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTF 248 (773)
Q Consensus 169 ~l~DdF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtL 248 (773)
.+||+|+|++|++.|++|++||||+|+|+|+||+|||||++.++++++.++||+++|++|+|++|+|++|+++++|||+|
T Consensus 101 ~l~D~f~El~g~~~~~~d~avV~G~ari~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~lPlI~l 180 (339)
T 2f9y_A 101 LAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF 180 (339)
T ss_dssp HHCEEEEECCCCSSSCCCTTEEEEEEEETTEEEEEEEECCCSSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHccccEEccCCcCCCCCCcEEEEEEEECCEEEEEEEEeCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEE
Confidence 99999999999888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeeeeCHHHHHHHhhhh
Q 004120 249 IDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKS 328 (773)
Q Consensus 249 IDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVisPEgaAsIl~rd 328 (773)
+|||||++|.++|..||+.++++++.+++.++||+|++|+|+|+|||++++++||+++|||+|+|++++|++|++|+|++
T Consensus 181 vDt~Ga~~g~~aE~~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~p~A~~~v~~Peg~asil~~~ 260 (339)
T 2f9y_A 181 IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS 260 (339)
T ss_dssp EEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEESSCHHHHHHHHSSC
T ss_pred EeCCCCccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcCcHHHHHHhccCeeeecCCCEEEeeccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHhcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccC
Q 004120 329 AKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGG 406 (773)
Q Consensus 329 ~~~a~eaAe~lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~~R~~k~r~~G~ 406 (773)
...++++++...+||.+++++|+||+||+||+||||+||..+...++..|...|..|..+++++|+++||+|||+||.
T Consensus 261 ~~~~~~Aae~~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~~R~~~~~~~g~ 338 (339)
T 2f9y_A 261 ADKAPLAAEAMGIIRPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGY 338 (339)
T ss_dssp STTHHHHHHHHTCSHHHHHTTTSCSCCCCCSTTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHSSC
T ss_pred hccHHHHHHHcCCCHHHHHHcCCeeEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhcc
Confidence 988889999999999999999999999999999999999999999999999999999999999999999999999995
No 3
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=100.00 E-value=1.6e-48 Score=439.02 Aligned_cols=289 Identities=20% Similarity=0.229 Sum_probs=244.2
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCCcccccccchHhHHHHHHHHHhhh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKMA 117 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~~~LdFEkPIvel~~ki~~l~~la 117 (773)
+.+|.+++.++ .+++||+ ++| ++||+. +|+++++| .+++.|.+|.+ +.
T Consensus 154 ~~~i~~~~~~~-s~~iP~Isvv~gp------~~GG~a~s~~l~D~ii~~~------~a~i~~aGP~v-----------I~ 209 (523)
T 1on3_A 154 YGKMFFANVKL-SGVVPQIAIIAGP------CAGGASYSPALTDFIIMTK------KAHMFITGPQV-----------IK 209 (523)
T ss_dssp HHHHHHHHHHH-TTTSCEEEEEEEE------EESGGGHHHHHSSEEEEET------TCEEESSCHHH-----------HH
T ss_pred HHHHHHHHHHh-cCCCCEEEEEcCC------CchHHHHHHhhCCeEEEeC------CCEEEecCHHH-----------HH
Confidence 57788888766 5679999 889 999994 99999999 79999999999 55
Q ss_pred hhcCCChHH-HHHHHHHHHH-H---------------hhhhhcCCCC-------------------hhHHhhhcCCCCCC
Q 004120 118 NDTGLDFSD-QIVSLENKYQ-Q---------------ALKDLYTHLT-------------------PIQRVNIARHPNRP 161 (773)
Q Consensus 118 ~~~giDlse-EIq~LE~Kle-e---------------L~kdI~~~Lt-------------------~weRV~l~Rdp~RP 161 (773)
+.++.+++. +++..+.... + ..+++++-|+ .+..-.+++||++|
T Consensus 210 ~~~ge~~~~e~lggae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~lp~~~~~~~p~~~~~d~p~~~~~l~~~vp~~~~~~ 289 (523)
T 1on3_A 210 SVTGEDVTADELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFLPQNNTEEASFVNPNNDVSPNTELRDIVPIDGKKG 289 (523)
T ss_dssp HHHCCCCCHHHHHSHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTSCSSTTSCCCCCSCCCCCCCCGGGGGTSCSSTTCC
T ss_pred HHhCCcCChHhcccHHHHhhccCceEEEeCCHHHHHHHHHHHHHhcCccCcccCCCCCCCCCccchhhhhhhcCCCCCCC
Confidence 555666654 4555544331 1 1222333231 11234678999999
Q ss_pred c-hhhhhhhhhh--hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHh
Q 004120 162 T-FLDHVFNITE--KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYA 238 (773)
Q Consensus 162 ~-~~d~I~~l~D--dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lA 238 (773)
| ++++|..+|| +|+|++++|+ +++|||+|||+|+||+|||||++ +++|+++|++++|++|||++|
T Consensus 290 ~d~r~~I~~l~D~g~f~E~~~~~~----~~iv~G~ari~G~~Vgvian~~~--------~~~G~~~~~~a~Kaar~i~~~ 357 (523)
T 1on3_A 290 YDVRDVIAKIVDWGDYLEVKAGYA----TNLVTAFARVNGRSVGIVANQPS--------VMSGCLDINASDKAAEFVNFC 357 (523)
T ss_dssp CCTHHHHHHHSGGGCEEEESTTSS----TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCeEEEecCCCc----CcEEEEEEEECCEEEEEEEecCC--------ccCCCCCHHHHHHHHHHHHHH
Confidence 9 8999999999 4999999987 89999999999999999999997 799999999999999999999
Q ss_pred hhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCCeee
Q 004120 239 DHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENAVFY 314 (773)
Q Consensus 239 ekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A~~s 314 (773)
++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+||||+|+|+|||+++|++ +|+++|||+|+|+
T Consensus 358 ~~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~~A~~l~a~a~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~ 437 (523)
T 1on3_A 358 DSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA 437 (523)
T ss_dssp HHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE
T ss_pred HhcCCCeEEEEeCCCcCcchHHHHhhHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred eeCHHHHHHHhhhhccC-chHHHHHh----------cccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHH
Q 004120 315 VASPEACAAILWKSAKA-SPKAAEKL----------KITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAIN 379 (773)
Q Consensus 315 VisPEgaAsIl~rd~~~-a~eaAe~l----------kitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~ 379 (773)
||+||+|++|+|++... ++++++.+ ..++.++.+.|+||+|| +|.+||+.|..+|.
T Consensus 438 Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II---------~p~~tR~~l~~~L~ 504 (523)
T 1on3_A 438 VMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVI---------DPADTRRKIASALE 504 (523)
T ss_dssp SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEEC---------CGGGHHHHHHHHHH
T ss_pred ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEee---------CHHHHHHHHHHHHH
Confidence 99999999999998622 22333222 15668899999999999 78888888888774
No 4
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=100.00 E-value=2e-47 Score=431.78 Aligned_cols=290 Identities=19% Similarity=0.224 Sum_probs=242.1
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCC-cccccccchHhHHHHHHHHHhh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKP-VTLDFEKPLVGLSKKIMDVRKM 116 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~-~~LdFEkPIvel~~ki~~l~~l 116 (773)
+.+|..++.++ .++.||+ ++| ++||+. +|+++++| . +++.|.+|.+ +
T Consensus 167 ~~~i~~~~~~~-s~~iP~Isvv~gp------~~GG~a~s~al~D~ii~~~------~~a~i~~aGP~v-----------I 222 (548)
T 2bzr_A 167 YSRIFRNNILA-SGVIPQISLIMGA------AAGGHVYSPALTDFVIMVD------QTSQMFITGPDV-----------I 222 (548)
T ss_dssp HHHHHHHHHHT-TTTSCEEEEECSE------EESGGGHHHHHSSEEEEET------TTCEEESSCHHH-----------H
T ss_pred HHHHHHHHHHh-cCCCcEEEEecCC------CchHHHHHHHhCCeEEecc------CceeEEeccHHH-----------H
Confidence 46788888776 5679999 899 999994 99999999 6 8999999999 5
Q ss_pred hhhcCCChHH-HHHHHHHHH----------------HHhhhhhcCCCC---------------------hh------HHh
Q 004120 117 ANDTGLDFSD-QIVSLENKY----------------QQALKDLYTHLT---------------------PI------QRV 152 (773)
Q Consensus 117 a~~~giDlse-EIq~LE~Kl----------------eeL~kdI~~~Lt---------------------~w------eRV 152 (773)
...++.+++. +++..+... ....+++++-|+ ++ -.-
T Consensus 223 ~~~~ge~v~~e~lggae~h~~~sG~~d~vv~d~~~~~~~~r~lls~lp~~~~~~~p~~~~~~~~~~~~d~p~~~~~~l~~ 302 (548)
T 2bzr_A 223 KTVTGEEVTMEELGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSYLPPNNSTDAPRYQAAAPTGPIEENLTDEDLELDT 302 (548)
T ss_dssp HHHHCCCCCHHHHHBHHHHHHTSSCCSEEESSHHHHHHHHHHHHTTSCSSTTSCCCCCCCCCCCSSGGGSCCHHHHHGGG
T ss_pred HHHhCCcCChHhcccHHHHhhccCceeEEeCCHHHHHHHHHHHHHhcCccCcccCCCCCccccccccCCCCCCChHHHhh
Confidence 5555556654 455444332 112223333331 11 134
Q ss_pred hhcCCCCCCc-hhhhhhhhhhh-heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHH
Q 004120 153 NIARHPNRPT-FLDHVFNITEK-FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRK 230 (773)
Q Consensus 153 ~l~Rdp~RP~-~~d~I~~l~Dd-F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rK 230 (773)
.+++||++|| ++++|..+||+ |+|++++|+ +++|||+|||+|+||+|||||++ +++|++++++++|
T Consensus 303 ~vp~~~~~pyd~r~~I~~l~D~~f~E~~~~~~----~~vV~G~ari~G~~Vgvian~~~--------~~~G~l~~~~a~K 370 (548)
T 2bzr_A 303 LIPDSPNQPYDMHEVITRLLDDEFLEIQAGYA----QNIVVGFGRIDGRPVGIVANQPT--------HFAGCLDINASEK 370 (548)
T ss_dssp TSCSSTTCCCCTHHHHHHHSSSCCEEESTTSS----TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHH
T ss_pred hCCCCCCCCCCHHHHHHHHcCCCeEEeccccC----ccEEEEEEEECCEEEEEEEECCc--------ccCCCCCHHHHHH
Confidence 6789999999 89999999997 999999987 89999999999999999999997 7999999999999
Q ss_pred HHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceee
Q 004120 231 ALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLL 306 (773)
Q Consensus 231 A~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vl 306 (773)
++|||++|++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+||||+|+|+|||+++|++ +|++|
T Consensus 371 aar~i~~a~~~~iPlv~lvDt~Gf~~G~~~E~~Gi~~~ga~~l~a~~~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~ 450 (548)
T 2bzr_A 371 AARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNL 450 (548)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEE
T ss_pred HHHHHHHHHhcCCCEEEEeeccCCCCChHHHHhhHHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhccccCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987 99999
Q ss_pred eecCCeeeeeCHHHHHHHhhhhccCch-----HHHHHhc----------ccHHHHHHcCCceeeecCCCCCCCCChHHHH
Q 004120 307 MLENAVFYVASPEACAAILWKSAKASP-----KAAEKLK----------ITGSELCKLQIADGVIPEPLGGAHADPSWTS 371 (773)
Q Consensus 307 m~e~A~~sVisPEgaAsIl~rd~~~a~-----eaAe~lk----------itA~dL~~lGiVD~IIpE~lGgAh~dP~~tr 371 (773)
|||+|+|+||+||+|++|+|++...+. ++++.++ .++.++.+.|+||+|| +|.+||
T Consensus 451 awp~a~i~Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II---------~p~~tR 521 (548)
T 2bzr_A 451 AWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVNPYVAAERGYVGAVI---------PPSHTR 521 (548)
T ss_dssp ECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSBSHHHHHTTSSSEEC---------CGGGHH
T ss_pred EcCCCEEEecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHHHhhCCHHHHHhcCCCceee---------CHHHHH
Confidence 999999999999999999999865332 2222221 3557889999999999 788898
Q ss_pred HHHHHHHHH
Q 004120 372 QQIKIAINE 380 (773)
Q Consensus 372 ~~L~~aL~~ 380 (773)
.+|..+|..
T Consensus 522 ~~l~~~L~~ 530 (548)
T 2bzr_A 522 GYIGTALRL 530 (548)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887753
No 5
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=8e-47 Score=425.62 Aligned_cols=289 Identities=23% Similarity=0.259 Sum_probs=243.0
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCC-cccccccchHhHHHHHHHHHhh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKP-VTLDFEKPLVGLSKKIMDVRKM 116 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~-~~LdFEkPIvel~~ki~~l~~l 116 (773)
+.++.+++.++ ..+.||+ ++| ++||+. +|++++.| . +++.|.+|.+ +
T Consensus 157 ~~~~~~~~~~~-s~~iP~Isvv~Gp------~~GG~a~s~al~D~vi~~~------~~a~i~~aGP~v-----------i 212 (527)
T 1vrg_A 157 YGEIFLRNTLA-SGVVPQITVIAGP------CAGGAVYSPALTDFIVMVD------QTARMFITGPNV-----------I 212 (527)
T ss_dssp HHHHHHHHHHH-TTTSCEEEEEEEE------EBGGGGHHHHHSSEEEEET------TTCBCBSSCHHH-----------H
T ss_pred HHHHHHHHHHh-CCCCCEEEEEeCC------CchHHHHHHHcCCeEEEec------CceEEEecCHHH-----------H
Confidence 46777877665 5789999 888 999994 99999999 6 8899999998 5
Q ss_pred hhhcCCChHH-HHHHHHHHH----------------HHhhhhhcCCCC-------------------hhHHhhhcCCCCC
Q 004120 117 ANDTGLDFSD-QIVSLENKY----------------QQALKDLYTHLT-------------------PIQRVNIARHPNR 160 (773)
Q Consensus 117 a~~~giDlse-EIq~LE~Kl----------------eeL~kdI~~~Lt-------------------~weRV~l~Rdp~R 160 (773)
...++.+++. +++..+... ....+++++-|+ .+-...+++||++
T Consensus 213 ~~~~ge~v~~e~lggae~~~~~~G~vd~vv~d~~~~~~~~~~~Ls~lp~~~~~~~~~~~~~dp~~~~~~l~~~vp~~~~~ 292 (527)
T 1vrg_A 213 KAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLPSNNAEEPPVEDPDTSLETPEDILDILPDNPNK 292 (527)
T ss_dssp HHHHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTSCSSTTSCCCBCSCCCCCCCCGGGGGSSCSSTTS
T ss_pred HHHhCCCCCccccccHHHHhhcccceEEEecCHHHHHHHHHHHHHhcCccCcccCCCCCCCCCCcChHHHhhhccCCCCC
Confidence 5555555553 344444332 112223344332 1124678999999
Q ss_pred Cc-hhhhhhhhhhh--heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHH
Q 004120 161 PT-FLDHVFNITEK--FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYY 237 (773)
Q Consensus 161 P~-~~d~I~~l~Dd--F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~l 237 (773)
|| ++++|..+||+ |+|++++|+ +++|||+|||+|+||+|||||++ +++|+++|++++|++|+|++
T Consensus 293 pyd~r~~I~~l~D~g~f~E~~~~~~----~~vV~G~ari~G~~V~via~~~~--------~~~G~~~~~~~~Kaar~i~~ 360 (527)
T 1vrg_A 293 GYDVRDVIKRVVDHGEFFEVQPYFA----KNIVIGFARIQGKTVGIVANQPS--------VLAGVLDIDSSDKAARFIRF 360 (527)
T ss_dssp CCCTHHHHHHHSGGGCCEEESTTSS----TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHhcCCCeEEEecCCCc----CcEEEEEEEECCEEEEEEEEcCc--------ccCCCCCHHHHHHHHHHHHH
Confidence 99 89999999994 999999987 89999999999999999999997 79999999999999999999
Q ss_pred hhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCCee
Q 004120 238 ADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENAVF 313 (773)
Q Consensus 238 Aekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A~~ 313 (773)
|++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+||||+|+|+|||+++|++ +|+++|||+|+|
T Consensus 361 a~~~~~Plv~lvDtpG~~~G~~~E~~g~~~~~A~~~~a~~~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~ 440 (527)
T 1vrg_A 361 LDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEI 440 (527)
T ss_dssp HHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE
T ss_pred HhhcCCCeEEEecCCCCcCchhhHHhHHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999999987 999999999999
Q ss_pred eeeCHHHHHHHhhhhccC-chHHHHHh----------cccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHH
Q 004120 314 YVASPEACAAILWKSAKA-SPKAAEKL----------KITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAIN 379 (773)
Q Consensus 314 sVisPEgaAsIl~rd~~~-a~eaAe~l----------kitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~ 379 (773)
+||+||+|++|+|++... ++++++.+ ..++.++.+.|+||+|| +|.+||+.|..+|.
T Consensus 441 ~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~~~~g~iD~II---------~p~~tR~~l~~~L~ 508 (527)
T 1vrg_A 441 AVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVI---------DPRETRKYIMRALE 508 (527)
T ss_dssp ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEEC---------CGGGHHHHHHHHHH
T ss_pred EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHHcCCCCeee---------CHHHHHHHHHHHHH
Confidence 999999999999998632 22222221 25668899999999999 78888888888774
No 6
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=100.00 E-value=1.8e-46 Score=422.21 Aligned_cols=291 Identities=19% Similarity=0.218 Sum_probs=238.3
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCC-cccccccchHhHHHHHHHHHhh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKP-VTLDFEKPLVGLSKKIMDVRKM 116 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~-~~LdFEkPIvel~~ki~~l~~l 116 (773)
+.++.++..++. ++.||+ ++| ++||+. +|++++.| + +++.|.+|.+ +
T Consensus 164 ~~~i~~~~~~~s-~~iP~Isvv~Gp------~~GG~a~s~a~~D~vi~~~------~~a~i~~aGP~v-----------I 219 (531)
T 3n6r_B 164 YGEVFQRNIMAS-GVVPQISMIMGP------CAGGAVYSPAMTDFIFMVK------DSSYMFVTGPDV-----------V 219 (531)
T ss_dssp HHHHHHHHHHTT-TTSCEEEEECSC------CBGGGGHHHHHSSEEEEET------TTCBCBSSCHHH-----------H
T ss_pred HHHHHHHHHHHh-CCCCEEEEEeCC------cchHHHHHhhhCCEEEEec------CCceEeecCHHH-----------H
Confidence 466777777776 679999 888 999984 89999887 5 7899999998 3
Q ss_pred hhhcCCChHHH-H-----HHH-----------HHHHHHhhhhhcCCCC--------------h------hHHhhhcCCCC
Q 004120 117 ANDTGLDFSDQ-I-----VSL-----------ENKYQQALKDLYTHLT--------------P------IQRVNIARHPN 159 (773)
Q Consensus 117 a~~~giDlseE-I-----q~L-----------E~KleeL~kdI~~~Lt--------------~------weRV~l~Rdp~ 159 (773)
...++.+++.| + +.. +...-...+++++.|+ + +-.-.+++||+
T Consensus 220 ~~~~ge~v~~E~LGGa~~h~~~sG~~d~v~~~e~~a~~~~r~lls~Lp~~~~~~~p~~~~~d~~~~~~~~l~~ivp~~~~ 299 (531)
T 3n6r_B 220 KTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPLNNREKPPVRPFFDDPDRIEPSLDTLVPDNPN 299 (531)
T ss_dssp HHHHCCCCCHHHHHBHHHHHHTTSCCSEEESSHHHHHHHHHHHHTTSCSSSSSCCCBCCCCSCTTCCCGGGGGTSCSSTT
T ss_pred HHHhCCccChhhcchHHHHhhccCcceEEeCCHHHHHHHHHHHHHhccccCCCCCCCCCCCCCcccChHHHHhhCCCCcC
Confidence 33333333221 1 000 1111122223333331 1 11235799999
Q ss_pred CCc-hhhhhhhhhh--hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHH
Q 004120 160 RPT-FLDHVFNITE--KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMY 236 (773)
Q Consensus 160 RP~-~~d~I~~l~D--dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~ 236 (773)
+|| ++++|..+|| +|+|++++|+ +++|||+|||+|+||+|||||++ +++|+++|++++|++|||+
T Consensus 300 ~pyd~r~vI~~l~D~~~f~E~~~~~~----~~iV~G~arl~G~~Vgvian~~~--------~~~G~l~~~~a~Kaarfi~ 367 (531)
T 3n6r_B 300 TPYDMKELIHKLADEGDFYEIQEEFA----KNIITGFIRLEGRTVGVVANQPL--------VLAGCLDIDSSRKAARFVR 367 (531)
T ss_dssp CCCCHHHHHHHHSTTSCCEEESTTSS----TTEEEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhccCCcceEEecccCC----CcEEEEEEEECCEEEEEEEeccc--------ccCCCCCHHHHHHHHHHHH
Confidence 999 9999999999 8999999988 99999999999999999999997 7999999999999999999
Q ss_pred HhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCCe
Q 004120 237 YADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENAV 312 (773)
Q Consensus 237 lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A~ 312 (773)
+|++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+|+||+|+|+|||+++|++ +|++||||+|+
T Consensus 368 lcd~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~ 447 (531)
T 3n6r_B 368 FCDAFEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAE 447 (531)
T ss_dssp HHHHTTCCEEEEEEECSBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCE
T ss_pred HhhccCCCEEEEeCCCCCCCCHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999996 99999999999
Q ss_pred eeeeCHHHHHHHhhhhccCchH-HH----HH--hcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHH
Q 004120 313 FYVASPEACAAILWKSAKASPK-AA----EK--LKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINES 381 (773)
Q Consensus 313 ~sVisPEgaAsIl~rd~~~a~e-aA----e~--lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~ 381 (773)
|+||+||+|++|+|++....++ .+ +. ...++....+.|+||+|| ||.+||.+|..+|...
T Consensus 448 i~Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~vI---------dP~~TR~~l~~~l~~~ 514 (531)
T 3n6r_B 448 VAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVI---------QPRSTRKRVARAFASL 514 (531)
T ss_dssp EESSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSSSHHHHHHTSSSEEC---------CGGGHHHHHHHHHHTT
T ss_pred EecCCHHHHHHHHhcccccchhHHHHHHHHHHHHhcCHHHHHhcCccCccc---------CHHHHHHHHHHHHHHH
Confidence 9999999999999998654422 11 11 124566777889999999 9999999999988653
No 7
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=2.9e-47 Score=433.16 Aligned_cols=311 Identities=12% Similarity=0.116 Sum_probs=245.6
Q ss_pred CcchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCCcccccccchHhHHH--------
Q 004120 45 RGFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKPVTLDFEKPLVGLSK-------- 108 (773)
Q Consensus 45 ~~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~~~LdFEkPIvel~~-------- 108 (773)
-+.+|..++.+++..+.|++ ..| ++||+. .++..++| .+++.|.+|.+ ++.
T Consensus 166 ~~g~i~~~~~~ls~~giP~Isvv~G~------~~GGga~~a~~d~vim~e~------~a~i~~~GP~v-i~~~~~~~~~d 232 (587)
T 1pix_A 166 GGGTPFFRNAELNQLGIPVIVGIYGT------NPAGGGYHSISPTVIIAHE------KANMAVGGAGI-MGGMNPKGHVD 232 (587)
T ss_dssp STTHHHHHHHHHHHTTCCEEEEECSE------EETHHHHHHHSSSEEEEET------TCEEESCCCTT-CCSCCSSSSCC
T ss_pred cHHHHHHHHHHHhCCCCCEEEEEecC------CcHHHHHHHhcCceEEecC------CcEEEecCHHH-Hhhhccccccc
Confidence 46789999999999999999 788 888873 45567787 67888888854 111
Q ss_pred --HHHHHH-hhh---------------hhcC-CCh--HH---HHHHHHHHHHHhhhh---hc-------CCCChhHHhhh
Q 004120 109 --KIMDVR-KMA---------------NDTG-LDF--SD---QIVSLENKYQQALKD---LY-------THLTPIQRVNI 154 (773)
Q Consensus 109 --ki~~l~-~la---------------~~~g-iDl--se---EIq~LE~KleeL~kd---I~-------~~Lt~weRV~l 154 (773)
+-.++- ... ..+| +|. .+ -+..+...+..+-.. -. -..++|+.+.+
T Consensus 233 ~~~A~el~~~tge~v~~e~lgga~~h~~~~GvvD~vv~~e~~a~~~~r~~ls~lp~~~~~~~~~~~~~~p~~~~~~l~~i 312 (587)
T 1pix_A 233 LEYANEIADMVDRTGKTEPPGAVDIHYTETGFMREVYASEEGVLEGIKKYVGMLPKYDPEFFRVDDPKAPAFPADDLYSM 312 (587)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSBHHHHTTTSCCSCEEESSHHHHHHHHHHHHHTSCCCCGGGGBSSCCCCCSSCGGGHHHH
T ss_pred hhHHHHHHHHhCCccChhhcccHHHHHhhcCceeEecCCHHHHHHHHHHHHHhCCccCCCCCCCCCCCCCCCChHHHhhh
Confidence 111111 010 0122 221 11 233333323222100 00 00134555544
Q ss_pred -cCCCCCCc-hhhhhhhhhhh--heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccc------cccccCCCCC
Q 004120 155 -ARHPNRPT-FLDHVFNITEK--FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKE------NIQRNFGMPT 224 (773)
Q Consensus 155 -~Rdp~RP~-~~d~I~~l~Dd--F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e------~~~~ngG~~~ 224 (773)
++||+||| ++++|..+||+ |+|++++|+ +++|||+|||+|+||+||||++++++++ ++.+++|+++
T Consensus 313 vp~~~~~pyd~r~vI~~l~D~~~f~E~~~~~~----~~iV~G~arl~G~~VgvIan~~g~~~~~P~~~~~~~~~~~G~l~ 388 (587)
T 1pix_A 313 VPLNDKRAYDIYNVIARLFDNSELHEYKKGYG----PEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKLY 388 (587)
T ss_dssp SCSSTTSCCCHHHHHHTTSGGGBCEESSTTSS----TTEEEEEEEETTEEEEEEEECCSEETTCCTTSCTTCCEETTEEC
T ss_pred CCCCCCCCccHHHHHHHhCCCceEEEeccccC----CcEEEEEEEECCEEEEEEEeccCccccccccccccccccCCCcC
Confidence 99999999 99999999995 999999876 9999999999999999999999887776 6778999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc---
Q 004120 225 PHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC--- 301 (773)
Q Consensus 225 peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~--- 301 (773)
|++++|++|||++|++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+|+||+|+|+|||+++|++
T Consensus 389 ~~~a~Kaarfi~~c~~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~gA~~~~a~a~a~vP~itvI~g~~~Ggg~~am~~~~~ 468 (587)
T 1pix_A 389 RQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQG 468 (587)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTHHHHTTCTTC
T ss_pred HHHHHHHHHHHHHhhcCCCCeEEEecCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCCccHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -c--ceeeeecCCeeeeeCHHHHHHHhhhhccCch--------HHHHHh---------cccHHHHHHcCCceeeecCCCC
Q 004120 302 -A--NKLLMLENAVFYVASPEACAAILWKSAKASP--------KAAEKL---------KITGSELCKLQIADGVIPEPLG 361 (773)
Q Consensus 302 -a--D~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~--------eaAe~l---------kitA~dL~~lGiVD~IIpE~lG 361 (773)
+ |+++|||+|+|+||+||+|++|+|++...+. +.++.+ ..++..+.+.|+||+||
T Consensus 469 ~~~~d~~~a~p~A~~~Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~~~p~~aa~~g~iD~VI----- 543 (587)
T 1pix_A 469 NDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIV----- 543 (587)
T ss_dssp TTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEEC-----
T ss_pred CcccceeeeccCCeEecCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHHHhCCHHHHHhcCCCcccc-----
Confidence 7 9999999999999999999999998875432 122222 37889999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHH
Q 004120 362 GAHADPSWTSQQIKIAINES 381 (773)
Q Consensus 362 gAh~dP~~tr~~L~~aL~~~ 381 (773)
+|.+||.+|..+|...
T Consensus 544 ----~p~~tR~~l~~~L~~~ 559 (587)
T 1pix_A 544 ----DMNKIRGYVEAFTEAA 559 (587)
T ss_dssp ----CTTTHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHH
Confidence 7888888888877543
No 8
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=100.00 E-value=2.4e-45 Score=413.19 Aligned_cols=302 Identities=19% Similarity=0.240 Sum_probs=237.8
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----cccccc-CCCCCCCCCcccccccchHhHHHHH------
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHF-KPLKEKPKPVTLDFEKPLVGLSKKI------ 110 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~-~P~~~~~~~~~LdFEkPIvel~~ki------ 110 (773)
+.++..++.++... .||+ ..| ++||+. +|++++ +| .+++.|.+|.+ ++.-+
T Consensus 156 ~~~i~~~~~~~s~~-iP~Isvv~G~------~~GG~a~~~al~D~~im~~~------~a~i~~aGP~v-i~~~~ge~v~~ 221 (530)
T 3iav_A 156 YGEIFRRNTHASGV-IPQISLVVGP------CAGGAVYSPAITDFTVMVDQ------TSHMFITGPDV-IKTVTGEDVGF 221 (530)
T ss_dssp HHHHHHHHHHTTTT-SCEEEEECSE------EEGGGGHHHHHSSEEEEETT------TCEEESSCHHH-HHHHHCCCCCH
T ss_pred HHHHHHHHHHHcCC-CCEEEEEecC------cchHHHHHHHhCCEEEEecC------CcEEEecCHHH-HHHHhCCcCCh
Confidence 57788888887775 9999 888 999984 899885 54 58899999988 22211
Q ss_pred HHHHhh---hhhcC-CCh-----HHHHHHHHHHHHHhhhhhcCC-----------CChhH---HhhhcCCCCCCc-hhhh
Q 004120 111 MDVRKM---ANDTG-LDF-----SDQIVSLENKYQQALKDLYTH-----------LTPIQ---RVNIARHPNRPT-FLDH 166 (773)
Q Consensus 111 ~~l~~l---a~~~g-iDl-----seEIq~LE~KleeL~kdI~~~-----------Lt~we---RV~l~Rdp~RP~-~~d~ 166 (773)
++|-.. ...+| .|+ .+-+..++.-+..+-..-... ...++ .-.++.|+++|| ++++
T Consensus 222 e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~lp~~~~~~~p~~~~~dp~~~~~~~~~l~~ivp~~~~~~yd~r~~ 301 (530)
T 3iav_A 222 EELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPSNNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPYDMHSV 301 (530)
T ss_dssp HHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHSCSSTTSCCCCCCCCCCCSCCHHHHHGGGSSCSSTTCCCCHHHH
T ss_pred hhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhccccCCCCCCCCCCCCcccccCChHhHHHhccCCCCCCCCHHHH
Confidence 122100 01122 111 112333333333321110000 11111 134688999999 9999
Q ss_pred hhhhhhh--heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCc
Q 004120 167 VFNITEK--FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFP 244 (773)
Q Consensus 167 I~~l~Dd--F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LP 244 (773)
|..+||+ |+|++++|+ +++|||+|||+|+||+||||++. +++|+++|++++|++|||++|++|++|
T Consensus 302 I~~l~D~~~f~E~~~~~~----~~iV~G~arl~G~~Vgvian~~~--------~~~G~l~~~~a~Kaarfi~~c~~~~iP 369 (530)
T 3iav_A 302 IEHVLDDAEFFETQPLFA----PNILTGFGRVEGRPVGIVANQPM--------QFAGCLDITASEKAARFVRTCDAFNVP 369 (530)
T ss_dssp HHTTSGGGCCEEESTTSC----TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHcCCcceeeeccccC----ceEEEEEEEECCEEEEEEEecCc--------ccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 9999994 999999987 99999999999999999999986 899999999999999999999999999
Q ss_pred EEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCCeeeeeCHHH
Q 004120 245 IVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENAVFYVASPEA 320 (773)
Q Consensus 245 IVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A~~sVisPEg 320 (773)
||+|+|||||++|.++|..|+++++|+++.++++++||+|+||+|+|+|||+++|++ +|++||||+|+|+||+||+
T Consensus 370 lv~lvDtpGf~~G~~~E~~gi~~~~Ak~l~a~a~a~vP~itvI~g~~~GGa~~am~~~~~~~d~~~awp~a~~~Vm~~eg 449 (530)
T 3iav_A 370 VLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYVVMGSKHLGADLNLAWPTAQIAVMGAQG 449 (530)
T ss_dssp EEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHH
T ss_pred EEEEeeCCCCCccHHHHHhhHHHHHHHHHHHHHhCCCCEEEEEeCCcchHHHHHhcCCCCCCCEEEEcCCceEecCCHHH
Confidence 999999999999999999999999999999999999999999999999999999987 9999999999999999999
Q ss_pred HHHHhhhhccCch--H-HH------HHh---cccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHH
Q 004120 321 CAAILWKSAKASP--K-AA------EKL---KITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESM 382 (773)
Q Consensus 321 aAsIl~rd~~~a~--e-aA------e~l---kitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L 382 (773)
|++|+|++...+. + .+ +.+ ..++....+.|+||+|| ||.+||.+|..+|....
T Consensus 450 aa~il~r~~~~~~~~d~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~VI---------dP~~TR~~l~~~l~~~~ 514 (530)
T 3iav_A 450 AVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAERGYVDAVI---------MPSDTRRHIVRGLRQLR 514 (530)
T ss_dssp HHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSSSHHHHHTTSSSEEC---------CGGGHHHHHHHHHHHHT
T ss_pred HHHHHhhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCCccc---------CHHHHHHHHHHHHHHHh
Confidence 9999999875432 1 11 111 13566777889999999 99999999999986543
No 9
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-45 Score=416.27 Aligned_cols=290 Identities=19% Similarity=0.234 Sum_probs=242.7
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc-----ccccccCCCCCCCCC-c-ccccccchHhHHHHHHHHHh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL-----THLSHFKPLKEKPKP-V-TLDFEKPLVGLSKKIMDVRK 115 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~-----~~l~~~~P~~~~~~~-~-~LdFEkPIvel~~ki~~l~~ 115 (773)
+.+|.+++.++ .+++||+ ++| ++||+. +|+++++| . + ++.|.+|.+
T Consensus 150 ~~~i~~~~~~~-s~~iP~Isvv~gp------~~GG~a~s~~l~D~~i~~~------~~a~~i~~aGP~v----------- 205 (522)
T 1x0u_A 150 YGAVFKMNVMA-SGVIPQITIMAGP------AAGGAVYSPALTDFIIMIK------GDAYYMFVTGPEI----------- 205 (522)
T ss_dssp HHHHHHHHHHH-TTTSCEEEEECSE------EEGGGGHHHHHSSEEEEEC------STTCEEESSCHHH-----------
T ss_pred HHHHHHHHHHh-CCCCcEEEEEcCC------CchHHHHHHhcCCeEEEec------CCccEEEecCHHH-----------
Confidence 46788888766 5779999 899 999994 99999999 6 7 899999999
Q ss_pred hhhhcCCChHH-HHHHHHHHHH-Hh---------------hhhhcCCCC--------------h------hHHhhhcCCC
Q 004120 116 MANDTGLDFSD-QIVSLENKYQ-QA---------------LKDLYTHLT--------------P------IQRVNIARHP 158 (773)
Q Consensus 116 la~~~giDlse-EIq~LE~Kle-eL---------------~kdI~~~Lt--------------~------weRV~l~Rdp 158 (773)
+.+.++.+++. +++..+.... ++ .+++++-|+ + +..-.+++|+
T Consensus 206 I~~~~ge~~~~e~lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp~~~~~~~~~~~~~d~p~~~~~~l~~v~p~~~ 285 (522)
T 1x0u_A 206 TKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPSNNMEEPPYIDTGDPADRDATGVEQIVPNDA 285 (522)
T ss_dssp HHHTTCCCCCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSCSSTTSCCCCCCCCCCSCCCSSSHHHHSCSSS
T ss_pred HHHHhCCcCChhhcchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhccccCccCCCCCCCCCCcccCchhHhhhccCCC
Confidence 66666666664 4555554331 11 122222221 0 1234567788
Q ss_pred CCCc-hhhhhhhhhh--hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHH
Q 004120 159 NRPT-FLDHVFNITE--KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 235 (773)
Q Consensus 159 ~RP~-~~d~I~~l~D--dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m 235 (773)
.+|| ++++|..+|| +|+|++++|+ ++||||+|||+|+||+|++||++ +++|++++++++|++|+|
T Consensus 286 ~~~~~~r~~I~~l~D~gsF~E~~~~~~----~~vVtG~ari~G~~V~via~d~~--------~~gG~l~~~~~~K~ar~i 353 (522)
T 1x0u_A 286 AKPYNMREIIYKIVDNGEFLEVHKHWA----QNIIVGFARIAGNVVGIVANNPE--------EFGGSIDIDAADKAARFI 353 (522)
T ss_dssp SCCCCHHHHHHHHSGGGCCEEETTTSC----TTEEEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCCCceEEecCCCc----ccEEEEEEEECCEEEEEEEECCC--------ccCCCcCHHHHHHHHHHH
Confidence 8898 8999999999 4999999876 99999999999999999999997 899999999999999999
Q ss_pred HHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCC
Q 004120 236 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENA 311 (773)
Q Consensus 236 ~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A 311 (773)
++|+++++|||+|+|||||++|..+|..|+..++|+++.++++++||+||||+|+|+|||+|++++ +|+++|||+|
T Consensus 354 ~~a~~~~~Plv~l~ds~G~~~G~~~E~~G~~~~~Ak~l~~~~~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A 433 (522)
T 1x0u_A 354 RFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTA 433 (522)
T ss_dssp HHHHHTTCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTC
T ss_pred HHHhhCCCCEEEEecCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999988 9999999999
Q ss_pred eeeeeCHHHHHHHhhhhccCc-hH-------HHH-H--hcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHH
Q 004120 312 VFYVASPEACAAILWKSAKAS-PK-------AAE-K--LKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINE 380 (773)
Q Consensus 312 ~~sVisPEgaAsIl~rd~~~a-~e-------aAe-~--lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~ 380 (773)
+|+||+||+|++|+|++.... ++ ..+ . ...++.++.++|+||+|| +|.+||..|..+|..
T Consensus 434 ~i~v~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~~~~~~~~G~iD~II---------~p~~tR~~L~~~L~~ 504 (522)
T 1x0u_A 434 EIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVI---------EPKDTRRVIVAGLEM 504 (522)
T ss_dssp EEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHHHTTSSSEEC---------CGGGHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCcEeE---------CHHHHHHHHHHHHHH
Confidence 999999999999999986322 11 111 1 136778999999999999 788888888887743
No 10
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=4.8e-45 Score=414.41 Aligned_cols=328 Identities=14% Similarity=0.136 Sum_probs=250.9
Q ss_pred CCcchHHHHHHhhhccCCCCC---CCCCCCCCCccccc-----cccccccCCCCCCCCCcccccccchHhHH--------
Q 004120 44 SRGFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGV-----LTHLSHFKPLKEKPKPVTLDFEKPLVGLS-------- 107 (773)
Q Consensus 44 ~~~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv-----~~~l~~~~P~~~~~~~~~LdFEkPIvel~-------- 107 (773)
.-+.++..++.++...+.|++ ..| ++||+ ++|+++++| .+++.|.+|.+ ++
T Consensus 166 ~~~g~if~~~~~ls~~~iP~Isvv~Gp------~~gGgAy~a~~~~vim~~~------~a~i~~aGP~v-I~~~~p~g~~ 232 (588)
T 3gf3_A 166 RGGGTPFFRNSELNQLGIPVIVGIYGT------NPAGGGYHSISPTILIAHQ------DANMAVGGAGI-LSGMNPKGYI 232 (588)
T ss_dssp TSTTHHHHHHHHHHHTTCCEEEEECSE------EETHHHHHHHSSSEEEEET------TCEEESSCCC------------
T ss_pred hhHHHHHHHHHHHhcCCCCEEEEEeCC------CCchhhhHhhCCeEEEEEC------CcEEEecChhh-hcccCccccc
Confidence 346889999999999999999 778 88875 488999999 88999999976 21
Q ss_pred ----------HHHHHH--H--hh------hhhcC-CCh-----HHHHHHHHHHHHHhhhh---hcC------CC---Chh
Q 004120 108 ----------KKIMDV--R--KM------ANDTG-LDF-----SDQIVSLENKYQQALKD---LYT------HL---TPI 149 (773)
Q Consensus 108 ----------~ki~~l--~--~l------a~~~g-iDl-----seEIq~LE~KleeL~kd---I~~------~L---t~w 149 (773)
.-..+- . .+ ...+| .|+ .+-+..++.-+.-+-.. ... .. ..|
T Consensus 233 ~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~sGv~d~~a~de~~al~~~r~~ls~Lp~~~~~~~~~~~~~~p~~~~~~L 312 (588)
T 3gf3_A 233 DDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFFREVYQNDLGVIDGIKKYISYLPAYNLEFFRVDTPKAPQLPAEDL 312 (588)
T ss_dssp ----CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCSCEEESSHHHHHHHHHHHHHTSCCCCGGGGCSSCCCCCSSCGGGH
T ss_pred cccchhhhhhhhccccccChhhccchhhhccccccceEEeCCHHHHHHHHHHHHHhCCccCCCcCCCCCCCCCcCChHHH
Confidence 111111 0 00 01122 111 11233333333322110 000 00 012
Q ss_pred HHhhhcCCCCCCc-hhhhhhhhhhh--heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCc-----cccccccCC
Q 004120 150 QRVNIARHPNRPT-FLDHVFNITEK--FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNT-----KENIQRNFG 221 (773)
Q Consensus 150 eRV~l~Rdp~RP~-~~d~I~~l~Dd--F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~-----~e~~~~ngG 221 (773)
.. .++.++++|| ++++|..+||+ |+|++++|+ +++|||||||+|+||+|||||+++.+ +++..+++|
T Consensus 313 ~~-ivP~~~~~pyD~r~vI~~i~D~~~f~E~~~~~g----~~iV~G~arl~G~pVgvvan~~~~~~~~p~~~~~~~~~~G 387 (588)
T 3gf3_A 313 YS-IIPMNQKRPYDIYEVIARLFDNSEFSEYKKGYG----PEMVTGLAKVNGLLVGVIANVQGLLMNYPEYKQNSVGIGG 387 (588)
T ss_dssp HH-HSCSSTTCCCCHHHHHHHHSGGGBCEESSTTSS----TTEEEEEEEETTEEEEEEEECCSEEETCCTTSSSCEEETT
T ss_pred Hh-hCCCCCCCCCCHHHHHHHHcCCCcceeeccccc----ccEEEEEEEECCEEEEEEEecCCcccccccchhhhhccCC
Confidence 23 3788999999 99999999994 999999987 99999999999999999999987643 456778899
Q ss_pred CCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc
Q 004120 222 MPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC 301 (773)
Q Consensus 222 ~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~ 301 (773)
+++|++++|++|||++|++|++|||||+|||||++|.++|+.|+++++|+++.++++++||+|+||+|+|+|||+++|++
T Consensus 388 ~l~~~~a~Kaarfi~lcd~f~iPlv~lvDtpGf~~G~~aE~~Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~ 467 (588)
T 3gf3_A 388 KLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKASAAAHYVLGG 467 (588)
T ss_dssp EECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHHHCSCEEEEESSEEETTHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHhhhcCCCeEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCCccHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ----c--ceeeeecCCeeeeeCHHHHHHHhhhhccCch---------HHHH------H--hcccHHHHHHcCCceeeecC
Q 004120 302 ----A--NKLLMLENAVFYVASPEACAAILWKSAKASP---------KAAE------K--LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 302 ----a--D~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~---------eaAe------~--lkitA~dL~~lGiVD~IIpE 358 (773)
+ |++||||+|+|+||+||+|++|+|++..... +.+. . ...++....+.|+||+||
T Consensus 468 ~~~~~~~~~~~awp~A~~sVm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~aA~r~~vD~VI-- 545 (588)
T 3gf3_A 468 PQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMIQMYTDKSRPKYCTEKGMVDEIV-- 545 (588)
T ss_dssp TTCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHTTSHHHHHHTTSSSEEC--
T ss_pred cccCCccceEEECCCceEEeCCHHHHHHHHhhhHHhhhhccccccchHHHHHHHHHHHHHHhCCHHHHHhcCCCCeee--
Confidence 3 4999999999999999999999998743211 0011 0 124666677889999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH
Q 004120 359 PLGGAHADPSWTSQQIKIAINESMDEL-GKMDTQELLKHRN 398 (773)
Q Consensus 359 ~lGgAh~dP~~tr~~L~~aL~~~L~eL-~~l~~~~l~~~R~ 398 (773)
||.+||.+|..++..++..- +-.|..+++--|.
T Consensus 546 -------dP~~TR~~l~~~~~~~~~~p~~~~~~~~~~~~~~ 579 (588)
T 3gf3_A 546 -------DMTEVRPYIQAFTEAAYQNPQSICPMHQMLTPRS 579 (588)
T ss_dssp -------CGGGHHHHHHHHHHHHTTSCSCCCCGGGCSHHHH
T ss_pred -------CHHHHHHHHHHHHHHHHcCCCccCchhhhhhhHH
Confidence 99999999999999887653 3334444444444
No 11
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=100.00 E-value=1.2e-42 Score=392.50 Aligned_cols=299 Identities=16% Similarity=0.187 Sum_probs=230.7
Q ss_pred CcchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc------ccccccCCCCCCCCCcccccccchHhHHHHH-----
Q 004120 45 RGFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL------THLSHFKPLKEKPKPVTLDFEKPLVGLSKKI----- 110 (773)
Q Consensus 45 ~~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~------~~l~~~~P~~~~~~~~~LdFEkPIvel~~ki----- 110 (773)
-+.+|..++.+++..+.|++ ..| ++||+. .++..++| .+++.|.+|.+ ++.-+
T Consensus 182 ~~~~i~~~~~~ls~~giP~Isvv~G~------~~GGga~~~a~~d~vim~e~------~a~i~~aGP~v-ik~~~ge~~~ 248 (555)
T 3u9r_B 182 HFGRIFFNQANMSARGIPQIAVVMGS------CTAGGAYVPAMSDETVMVRE------QATIFLAGPPL-VKAATGEVVS 248 (555)
T ss_dssp STTHHHHHHHHHHHTTCCEEEEECSC------CBGGGGHHHHTSSEEEEETT------TCBCBSSCHHH-HHHHHCCCCC
T ss_pred cHHHHHHHHHHHhcCCCCEEEEEecC------CCccHHHHHHhCCceEEecC------CceEEEccHHH-HHHHhcCccC
Confidence 46889999999999999999 788 888873 56677998 88999999987 11111
Q ss_pred -HHHHh---hhhhcC-CCh--HHH---HHHHHHHHHHhhhhhc---------CCCChhH--HhhhcCCCCCCc-hhhhhh
Q 004120 111 -MDVRK---MANDTG-LDF--SDQ---IVSLENKYQQALKDLY---------THLTPIQ--RVNIARHPNRPT-FLDHVF 168 (773)
Q Consensus 111 -~~l~~---la~~~g-iDl--seE---Iq~LE~KleeL~kdI~---------~~Lt~we--RV~l~Rdp~RP~-~~d~I~ 168 (773)
++|=. ....+| .|+ .++ +..++..+..+-..-. ..+.+++ .-.+++||++|| ++++|.
T Consensus 249 ~e~LGGa~~h~~~sGv~d~v~~de~~a~~~~r~~ls~Lp~~~~~~~~~~~~~~p~~~~~~l~~ivP~~~~~pyd~r~~i~ 328 (555)
T 3u9r_B 249 AEELGGADVHCKVSGVADHYAEDDDHALAIARRCVANLNWRKQGQLQCRAPRAPLYPAEELYGVIPADSKQPYDVREVIA 328 (555)
T ss_dssp HHHHHBHHHHHHTTCSCSEEESSHHHHHHHHHHHHHTSCCCCCCCCCCCCCCCCSSCGGGHHHHSCSSTTSCCCTHHHHT
T ss_pred hhhccchhhhhhccCceeEEeCCHHHHHHHHHHHHHhCCccCCCCCCCCCCCCCCCChHHHHhhCCCCccCCccHHHHHh
Confidence 12200 001122 111 111 2222222221111000 0011112 235689999999 899999
Q ss_pred hhhhh--heeccCCCCCCCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEE
Q 004120 169 NITEK--FVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIV 246 (773)
Q Consensus 169 ~l~Dd--F~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIV 246 (773)
.++|+ |+|++..|+ +++|||+|||+|+||+||||+ |++++++++|++|||++|++|++|||
T Consensus 329 ~i~D~~~f~E~~~~~g----~~iV~G~ari~G~~Vgvian~-------------G~l~~~~a~Kaarfi~~c~~~~iPlv 391 (555)
T 3u9r_B 329 RLVDGSEFDEFKALFG----TTLVCGFAHLHGYPIAILANN-------------GILFAEAAQKGAHFIELACQRGIPLL 391 (555)
T ss_dssp TTSGGGBCEEESTTSS----TTEEEEEEEETTEEEEEEEEC-------------SSBCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred hhcCCceeEEeeccCC----CcEEEEEEEECCEEEEEEEeC-------------CccCHHHHHHHHHHHHHHhcCCCCEE
Confidence 99994 999998887 899999999999999999997 78999999999999999999999999
Q ss_pred EEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccc----cceeeeecCCeeeeeCHHHHH
Q 004120 247 TFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGC----ANKLLMLENAVFYVASPEACA 322 (773)
Q Consensus 247 tLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~----aD~Vlm~e~A~~sVisPEgaA 322 (773)
+|+|||||++|.++|..|+++++|+++.++++++||+|+||+|++||||+++|+. +|+++|||+|+|+||+||+|+
T Consensus 392 ~lvDtpGf~~G~~~E~~Gi~~~gAk~~~a~~~a~vP~itvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~Vmgpegaa 471 (555)
T 3u9r_B 392 FLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAA 471 (555)
T ss_dssp EEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEESSCHHHHH
T ss_pred EEecCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999984 899999999999999999999
Q ss_pred HHhhhh---ccC-------chHHH-------HH--hcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHH
Q 004120 323 AILWKS---AKA-------SPKAA-------EK--LKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESM 382 (773)
Q Consensus 323 sIl~rd---~~~-------a~eaA-------e~--lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L 382 (773)
+|+|.. ... .++.+ +. ...++......|+||+|| ||.+||.+|..+|....
T Consensus 472 ~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~p~~aa~r~~vD~vI---------dP~~TR~~l~~~l~~~~ 541 (555)
T 3u9r_B 472 GVLAQVKREQAERAGQQLGVEEEAKIKAPILEQYEHQGHPYYSSARLWDDGVI---------DPAQTREVLALALSAAL 541 (555)
T ss_dssp HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCBC---------CGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHhCCHHHHhhccccCccc---------ChHHHHHHHHHHHHHHh
Confidence 999942 111 11111 11 124556667789999999 99999999999886543
No 12
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=100.00 E-value=5.7e-40 Score=381.19 Aligned_cols=289 Identities=12% Similarity=0.070 Sum_probs=223.3
Q ss_pred cCCCCC---CCCCCCCCCccccc-----cccccccCCCCCCCCCcccccccchHhHHHHHHHHHhhhhhcCCCh---HHH
Q 004120 59 HDYPWP---KDPKDVDPNVKGGV-----LTHLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKMANDTGLDF---SDQ 127 (773)
Q Consensus 59 ~~~p~~---~~p~~~~~~~~gGv-----~~~l~~~~P~~~~~~~~~LdFEkPIvel~~ki~~l~~la~~~giDl---seE 127 (773)
.+.|++ +.| ++||. ++|.++..| ...+-|.+|.+ +....|.++ .++
T Consensus 258 ~~iP~IsvV~G~------~~GGgAy~~~lgD~vI~~~------~a~i~ltGp~v-----------i~~~~Ge~vy~s~e~ 314 (793)
T 2x24_A 258 DEIVTISMVSCR------ALGIGAYLVRLGQRVIQVE------NSHIILTGATA-----------LNKVLGRDVYTSNNQ 314 (793)
T ss_dssp HHSCEEEEECSE------EETHHHHHHHHTCCEEEET------TCEEESSCHHH-----------HHHHHSSCCCSCHHH
T ss_pred CCCCEEEEEecC------CchHHHHHHhhCCeEEEec------cccEEecCHHH-----------HHHhcCCcccCChhh
Confidence 458988 778 88886 499999988 67899999988 333333333 233
Q ss_pred HHHHHHHH---------------HHhhhhhcCCC--------------ChhHHh-hhcCCCCCCc-hhhhhh--------
Q 004120 128 IVSLENKY---------------QQALKDLYTHL--------------TPIQRV-NIARHPNRPT-FLDHVF-------- 168 (773)
Q Consensus 128 Iq~LE~Kl---------------eeL~kdI~~~L--------------t~weRV-~l~Rdp~RP~-~~d~I~-------- 168 (773)
+.-.+... -...+++++-| ++++|. .+.. +++|| ++++|.
T Consensus 315 LGGa~v~~~~Gv~d~vv~dd~ea~~~ir~~LsylP~~~~~~~p~~~~~d~~~rl~~ivP-~~~pyD~r~vI~g~~~~~~~ 393 (793)
T 2x24_A 315 LGGVQIMHHNGVSHVTVPDDFEGVCTILEWLSYMPKDNRSPVPVVTPKDPIDREIEFQP-SRGPYDPRWLLAGRPHPTLK 393 (793)
T ss_dssp HHSHHHHTTTTSCSEEESSHHHHHHHHHHHHTTSCSSTTSCCCCCCCSSCSSCCCCCCC-CSSCCCHHHHHHCEECSSSS
T ss_pred hccHHHHHhcCceEEEeCCHHHHHHHHHHHHHhcccccCCCCCCCCCCCChhHHHhhCC-CCCCCCHHHHHhcccccccc
Confidence 33222111 11111223322 123331 1111 57789 999999
Q ss_pred -----hhhh--hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecC------------CCcccccccc-CCCCCHHHH
Q 004120 169 -----NITE--KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKG------------RNTKENIQRN-FGMPTPHGY 228 (773)
Q Consensus 169 -----~l~D--dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg------------~~~~e~~~~n-gG~~~peg~ 228 (773)
.+|| +|+|++++|+ +++|||+|||+|+||+||||+++ +++++++.++ +|+++|+++
T Consensus 394 ~~~~~~l~D~g~F~E~~~~~g----~~iVtG~ARl~G~pVGVIAn~~~~v~~~~padP~~~~~~e~~~~~~gG~l~~~~a 469 (793)
T 2x24_A 394 GSWQSGFFDQGSFKEIMVPWA----QTVVTGRARLGGIPVGVIAAETRTVELVVPADPANLDSEAKIIQQAGQVWFPDSA 469 (793)
T ss_dssp SCEECCSSCTTCCEEESCSSC----TTEEEEEEEETTEEEEEEEECCSCEEEEECCCTTSTTCCCEEEEECTTEECHHHH
T ss_pred cchhhccccCcceEEecCccc----CcEEEEEEEECCEEEEEEEEccccccccccCCccccchhhhhhhhcCCcccHHHH
Confidence 9999 7999999988 99999999999999999999965 5677777666 599999999
Q ss_pred HHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEE--cCCCccchhhhcc---ccc
Q 004120 229 RKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIV--IGEGGSGGALAIG---CAN 303 (773)
Q Consensus 229 rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVV--iGeg~GGGAlA~g---~aD 303 (773)
+|++|||++|++|++|||+|+|||||++|.++|..|+++++|+++.++++++||+|+|| +|+++||+..+++ .+|
T Consensus 470 ~KaarfI~~cd~f~iPlv~LvDtpGf~~G~~aE~~Gi~~~gAkll~A~a~a~VP~itvI~r~Ge~~GGa~~~~~~~~~~d 549 (793)
T 2x24_A 470 YKTAQAIKDFNREKLPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRKYRQPVLIYIPPYAEVRGGSWAVMDTSINPL 549 (793)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCBCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEEHHHHHTTCGGGSTT
T ss_pred HHHHHHHHHhccCCCCEEEEecCCCCCCCHHHHHhhHHHHHHHHHHHHHhcCCCEEEEEecCCcccchhHHhhhcccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999 8887654444443 278
Q ss_pred e--eeeecCCeeeeeCHHHHHHHhhhhcc-C-------------------ch----HHHHH-------h-----------
Q 004120 304 K--LLMLENAVFYVASPEACAAILWKSAK-A-------------------SP----KAAEK-------L----------- 339 (773)
Q Consensus 304 ~--Vlm~e~A~~sVisPEgaAsIl~rd~~-~-------------------a~----eaAe~-------l----------- 339 (773)
+ ++|||+|+++||+||||++|+|++.. . ++ +.++. .
T Consensus 550 ~~ev~Awp~A~~~VM~pEgaa~Il~r~~~l~~~m~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~re~~~~p~y~~~a 629 (793)
T 2x24_A 550 CIEMYADRESRASVLEPEGTVEIKYQKKDLVKTIRRLDPISKKLVEQLGVSELSDTDRKELEGQLKAREDLLLPMYHQVA 629 (793)
T ss_dssp TEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHHCSSCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhccCEEEecCHHHHHHHHhhhhHHHHHHHhhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 7 79999999999999999999998861 0 00 00000 0
Q ss_pred ------cccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHH
Q 004120 340 ------KITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDE 384 (773)
Q Consensus 340 ------kitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~e 384 (773)
.-++..+.+.|+||+|| +|.+||..|..+|...|.+
T Consensus 630 ~~y~~~~~~p~r~a~~G~Id~VI---------dp~~TR~~l~~~L~~~l~e 671 (793)
T 2x24_A 630 LHFADLHDTAGRMLEKGVIYDIL---------EWKTARSFLYWRLRRLLLE 671 (793)
T ss_dssp HHHHHTTSBHHHHHHTTSSSEEE---------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHcCcCcccc---------CHHHHHHHHHHHHHHHHHH
Confidence 02566688889999999 9999999999999987765
No 13
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=100.00 E-value=6.6e-38 Score=361.43 Aligned_cols=250 Identities=15% Similarity=0.156 Sum_probs=195.9
Q ss_pred cCCCCC---CCCCCCCCCccccc-----cccccccCCCCCCCCCcccccccchHhHHHHH--------HHHHh--hhhhc
Q 004120 59 HDYPWP---KDPKDVDPNVKGGV-----LTHLSHFKPLKEKPKPVTLDFEKPLVGLSKKI--------MDVRK--MANDT 120 (773)
Q Consensus 59 ~~~p~~---~~p~~~~~~~~gGv-----~~~l~~~~P~~~~~~~~~LdFEkPIvel~~ki--------~~l~~--la~~~ 120 (773)
.+.|.+ +.| ++||. ++|.++..| ...+-|.+|-+ +++-+ ++|-. +-..+
T Consensus 245 ~~IPqIsvV~G~------c~GGgAY~paL~D~vImv~------~s~ifltGP~v-Ik~~tGeeV~~s~eeLGGA~vh~~s 311 (758)
T 3k8x_A 245 HDIFTITLVTCR------SVGIGAYLVRLGQRAIQVE------GQPIILTGAPA-INKMLGREVYTSNLQLGGTQIMYNN 311 (758)
T ss_dssp TTSCEEEEECSC------EETHHHHHHHHTCEEEEET------TCCEESSCHHH-HHHHHTSCCCSCTHHHHSHHHHTTT
T ss_pred cCCCEEEEEccC------CchHHHHHHhhCCEEEEEC------CceEEEeCHHH-HHHHhCCccccCchhcchhhHHHhc
Confidence 467877 778 88886 599999998 67899999977 11111 11110 00012
Q ss_pred C-CCh--HHHHHHHHHHHHHhhhhhcCCC--------------ChhHH-hhhcCCCCCCc-hhhhhhh----------hh
Q 004120 121 G-LDF--SDQIVSLENKYQQALKDLYTHL--------------TPIQR-VNIARHPNRPT-FLDHVFN----------IT 171 (773)
Q Consensus 121 g-iDl--seEIq~LE~KleeL~kdI~~~L--------------t~weR-V~l~Rdp~RP~-~~d~I~~----------l~ 171 (773)
| .|+ .++...++. .+++++-| +||+| +.+..++++|| ++++|.. +|
T Consensus 312 Gvad~va~dd~eal~~-----ir~lLsyLP~~~~~~~p~~~~~dp~dr~~~~vP~~~~pYD~R~vIa~~~d~~~~~~giv 386 (758)
T 3k8x_A 312 GVSHLTAVDDLAGVEK-----IVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVRWMIEGRETESGFEYGLF 386 (758)
T ss_dssp TSSSEEESSHHHHHHH-----HHHHHTTSCSSTTSCCCCCCCSSCSCSCCCCCCCSSSCCCHHHHHHCEEETTEEECCSS
T ss_pred CCeeEEecCHHHHHHH-----HHHHHhhCCCCCCCCCCCCCCCCchhhhhccCCCCCCCCCHHHHHhcccccccccceee
Confidence 2 111 112222221 11223322 23444 22222356899 9999999 89
Q ss_pred h--hheeccCCCCCCCCCceEEEEEEECCeEEEEEEeecC------------CCccccccccC-CCCCHHHHHHHHHHHH
Q 004120 172 E--KFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKG------------RNTKENIQRNF-GMPTPHGYRKALRMMY 236 (773)
Q Consensus 172 D--dF~EL~gd~~~~dD~aVVtGlArI~GrpV~VIa~dkg------------~~~~e~~~~ng-G~~~peg~rKA~R~m~ 236 (773)
| +|+|++++|+ +++|||+|||+|+||+||||+++ ++++|++.+++ |+++|++++|++|||+
T Consensus 387 D~~sF~E~~~~~a----~~iVtG~ARl~G~pVGVIAn~~~~~~~~~padP~~p~~~e~~~~~~gG~l~pe~a~KaArfI~ 462 (758)
T 3k8x_A 387 DKGSFFETLSGWA----KGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAETLIQEPGQVWHPNSAFKTAQAIN 462 (758)
T ss_dssp CTTCCEEESTTSC----TTEEEEEEEETTEEEEEEEECCSCEEEEECCCTTSTTCCCEEEEECTTEECHHHHHHHHHHHH
T ss_pred cCCceEEEcCCcc----ccEEEEEEEECCEEEEEEEEccccccccCcccccCcchhhhHHhhcCCCCCHHHHHHHHHHHH
Confidence 9 8999999998 99999999999999999999876 35667766665 9999999999999999
Q ss_pred Hhhh-cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEc--CCCccchhhhccc---cce--eeee
Q 004120 237 YADH-HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVI--GEGGSGGALAIGC---ANK--LLML 308 (773)
Q Consensus 237 lAek-f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVVi--Geg~GGGAlA~g~---aD~--Vlm~ 308 (773)
+|++ |++|||+|+|||||++|.++|..|+++++|+++.++++++||+|+||+ |+|+|||+++|++ +|+ ++||
T Consensus 463 lcd~~f~iPLv~LvDtpGf~~G~~aE~~Gi~k~gAkll~A~a~a~VP~itVI~RkGe~~GGA~~am~~~~~ad~~~v~Aw 542 (758)
T 3k8x_A 463 DFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTGELRGGSWVVVDPTINADQMEMYAD 542 (758)
T ss_dssp HHHHTSCCCEEECCCCCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEETHHHHTTCGGGSTTTEEEEEE
T ss_pred HhhhccCCCEEEEecCCCCCCCHHHHHccHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHHHHhCcccCCCHHHHhcC
Confidence 9999 999999999999999999999999999999999999999999999999 8998888878873 887 9999
Q ss_pred cCCeeeeeCHHHHHHHhhhhcc
Q 004120 309 ENAVFYVASPEACAAILWKSAK 330 (773)
Q Consensus 309 e~A~~sVisPEgaAsIl~rd~~ 330 (773)
|+|+++||+||||++|+|++..
T Consensus 543 p~A~isVM~pEgaa~Il~r~~~ 564 (758)
T 3k8x_A 543 VNARAGVLEPQGMVGIKFRREK 564 (758)
T ss_dssp TTCEEESSCHHHHHHHHSCHHH
T ss_pred CCCEEEccCHHHHHHHHhcchH
Confidence 9999999999999999999764
No 14
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-37 Score=322.93 Aligned_cols=226 Identities=18% Similarity=0.142 Sum_probs=195.2
Q ss_pred HHHHHHHhhhhhcCC-CChhHHh-hhcCCCCCCchhhhhhhhhhh--heeccCCC------CCC--------------CC
Q 004120 131 LENKYQQALKDLYTH-LTPIQRV-NIARHPNRPTFLDHVFNITEK--FVELHGDR------AGY--------------DD 186 (773)
Q Consensus 131 LE~KleeL~kdI~~~-Lt~weRV-~l~Rdp~RP~~~d~I~~l~Dd--F~EL~gd~------~~~--------------dD 186 (773)
|..|..+....+|.+ |++|..| ...+|+.|+.++++|..++|+ |+|+++++ .|. .+
T Consensus 29 l~~kc~~~~~~~y~~~l~~~~~v~p~~~~~~r~~arerI~~L~D~gsF~El~~~~~~~~~l~f~~y~~~l~~~~~~t~~~ 108 (285)
T 2f9i_B 29 IMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLK 108 (285)
T ss_dssp SEEECTTTCCEEEHHHHHHTTTBCTTTCCBCCCCHHHHHHHTSCTTCCEEESTTCEECCTTCCTTHHHHHHHHHHHHCCS
T ss_pred HHHhhHhhCCccchhhhHHhcCcCCCCCCCCCCCHHHHHHHHccCCCcEEECCCcCcCCcccccchhHHHHHHhhccCCC
Confidence 344445555567766 5777665 477888898999999999994 99999875 222 46
Q ss_pred CceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchH
Q 004120 187 PAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQG 266 (773)
Q Consensus 187 ~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa 266 (773)
++||||+|+|+|+||+|++||++ +++|++++.+++|++|++++|.++++|||+|+|||||+++++....+|+
T Consensus 109 ~avVtG~g~I~G~~V~v~a~d~~--------~~gGs~g~~~~~K~~r~ie~A~~~~lPlI~l~dsgGar~qEGi~sl~q~ 180 (285)
T 2f9i_B 109 EAVVTGTAQLDGMKFGVAVMDSR--------FRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQM 180 (285)
T ss_dssp SSEEEEEEEETTEEEEEEEECTT--------TGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEECSCCGGGHHHHHHHH
T ss_pred CeEEEEEEEECCEEEEEEEEccc--------cccCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcchhhhhhhHhHH
Confidence 99999999999999999999997 8999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCccchhhhc-cccceeeeecCCeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHH
Q 004120 267 EAIAHNLRTMFGLKVPIISIVIGEGGSGGALAI-GCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSE 345 (773)
Q Consensus 267 ~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~-g~aD~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~d 345 (773)
..+++++.+++..+||+||||+|+|+||+++.+ +++|+++|||+|.++|+||+++++++|++. + +.++ +|+.
T Consensus 181 aki~~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~vi~~~~~~~~---~---e~~~-~Ae~ 253 (285)
T 2f9i_B 181 GKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKL---P---DDFQ-TAEF 253 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHHHTSCC---C---TTTT-BHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHHHHHHHhcccc---h---HhHh-hHHH
Confidence 999999999999999999999999998887775 469999999999999999999999999764 2 2343 7888
Q ss_pred HHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHH
Q 004120 346 LCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINE 380 (773)
Q Consensus 346 L~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~ 380 (773)
+.++|+||.|| +|++++..|.+.|..
T Consensus 254 ~~~~G~iD~Iv---------~~~e~r~~l~~~L~~ 279 (285)
T 2f9i_B 254 LLEHGQLDKVV---------HRNDMRQTLSEILKI 279 (285)
T ss_dssp HHHTTCCSEEC---------CGGGHHHHHHHHHHH
T ss_pred HHhcCCccEEe---------ChHHHHHHHHHHHHH
Confidence 99999999999 667888888777643
No 15
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=7e-33 Score=293.83 Aligned_cols=211 Identities=17% Similarity=0.110 Sum_probs=187.6
Q ss_pred HHHHHHHhhhhhcCC-CChhHHhh-hcCCCCCCchhhhhhhhhhh--heeccCCCC------------C-----------
Q 004120 131 LENKYQQALKDLYTH-LTPIQRVN-IARHPNRPTFLDHVFNITEK--FVELHGDRA------------G----------- 183 (773)
Q Consensus 131 LE~KleeL~kdI~~~-Lt~weRV~-l~Rdp~RP~~~d~I~~l~Dd--F~EL~gd~~------------~----------- 183 (773)
|..|..+....+|.+ |++|+.|. ..+|+.|++++++|..++|+ |.|++++.. |
T Consensus 23 l~~kc~~~~~~~~~~~l~~~~~v~~~~~~~~r~~arerI~~L~D~gsF~E~~~~~~~~~~~~f~d~~~y~~~l~~~~~~t 102 (304)
T 2f9y_B 23 VWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKET 102 (304)
T ss_dssp CEECCTTTCCCEETTHHHHTTTBCTTTCCBCCCCHHHHHHHHSCSSCCEECSCSCCCCCSSCCSSGGGTC------CCSS
T ss_pred HHHhhhhccchhhHHHHHHHhCCCCCCCCCCCCCHHHHHHHHCCCCcEEEECCccccCCccccccccChHHHHHHHHhcc
Confidence 555666677779998 99998877 69999999999999999994 999998621 1
Q ss_pred CCCCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHh
Q 004120 184 YDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEEL 263 (773)
Q Consensus 184 ~dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~ 263 (773)
+.+++||||+|+|+|++|+|+++|++ +++|++++..++|++|++++|.++++|+|+|+||+|++++.+.+..
T Consensus 103 ~~~~avvtG~g~i~G~~V~v~a~d~~--------~~ggslg~~~~~Ki~r~~e~A~~~~~PvI~l~~sGGarlqeg~~~l 174 (304)
T 2f9y_B 103 GEKDALVVMKGTLYGMPVVAAAFEFA--------FMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSL 174 (304)
T ss_dssp CCSSSEEEEECEETTEECBEEEECTT--------STTTCBCTHHHHHHHHHHHHHHHHTCCEEEEEEESSBCGGGTHHHH
T ss_pred CCCCcEEEEEEEECCEEEEEEEEcCc--------cccCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCCCcCHHHHHHHH
Confidence 24699999999999999999999998 8999999999999999999999999999999999999998877777
Q ss_pred chHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhc-cccceeeeecCCeeeeeCHHHHHHHhhhhccCchHHHHHhccc
Q 004120 264 GQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAI-GCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKIT 342 (773)
Q Consensus 264 Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~-g~aD~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~eaAe~lkit 342 (773)
++...+++++..++..++|+|++|+|+|+|||++.+ ++||+++|+++|+|+++||+++.+++|... + +. ..+
T Consensus 175 ~~~~~i~~al~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~Gp~~i~~~ig~~l---~---~~-~~~ 247 (304)
T 2f9y_B 175 MQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKL---P---PG-FQR 247 (304)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHHHTSCC---C---TT-TTB
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEeecHHHHHHHhCccC---C---cc-cCC
Confidence 788899999999988999999999999999996664 469999999999999999999999999753 2 12 359
Q ss_pred HHHHHHcCCceeee
Q 004120 343 GSELCKLQIADGVI 356 (773)
Q Consensus 343 A~dL~~lGiVD~II 356 (773)
|+.+.+.|+||.|+
T Consensus 248 Ae~~~~~Glvd~Vv 261 (304)
T 2f9y_B 248 SEFLIEKGAIDMIV 261 (304)
T ss_dssp HHHHGGGTCCSEEC
T ss_pred HHHHHhcCCccEEe
Confidence 99999999999999
No 16
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=99.96 E-value=3.6e-30 Score=293.19 Aligned_cols=193 Identities=17% Similarity=0.182 Sum_probs=167.9
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCCCC----CCCceEEEEEEECCeEEEEEEeecCCCccccccc
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGY----DDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQR 218 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~~~----dD~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ 218 (773)
.++||+|+||..+.|++. |.|+++.|... .+++||||+|+|+|++|+|++||++ +
T Consensus 58 ~gkltareRI~~LlD~gs-------------F~E~~~~y~~~~~~~~~dgvVtG~G~I~Gr~v~v~a~D~t--------~ 116 (587)
T 1pix_A 58 RGELTALQRIEKLVEPGS-------------WRPLNTLFNPQGNKNGSVAIVKGLGRVNGKWCVVVASDNK--------K 116 (587)
T ss_dssp TTCCCHHHHHHHHSCTTC-------------CEEESTTCCTTCCTTSCCSEEEEEEEETTEEEEEEEECTT--------T
T ss_pred cCCCCHHHHHHHHcCCCC-------------ceEhhhhcchhhhcCCCCcEEEEEEEECCEEEEEEEECCc--------c
Confidence 567888888888888876 89998763211 1499999999999999999999997 8
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHh---chHHHHHHHHHHHhCCCCcEEEEEcCCCccch
Q 004120 219 NFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEEL---GQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 295 (773)
Q Consensus 219 ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~---Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGG 295 (773)
++|++++.+++|++|++++|.++++|||+|+||+|++++.+.+.. .+...|++++..++.++||+||||+|+|+|||
T Consensus 117 ~gGs~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGArlqe~~~~l~~~~~~g~i~~~~~~ls~~giP~Isvv~G~~~GGg 196 (587)
T 1pix_A 117 LAGAWVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLGIPVIVGIYGTNPAGG 196 (587)
T ss_dssp TTTEECTTHHHHHHHHHHHHHHHTCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCccccchhccccccHHHHHHHHHHHhCCCCCEEEEEecCCcHHH
Confidence 999999999999999999999999999999999999999998875 13456999999999999999999999999999
Q ss_pred hhhccccceeeeecC-CeeeeeCHHHHHH---HhhhhccCchHHHHHh--cccHHH------HH-HcCCceeeec
Q 004120 296 ALAIGCANKLLMLEN-AVFYVASPEACAA---ILWKSAKASPKAAEKL--KITGSE------LC-KLQIADGVIP 357 (773)
Q Consensus 296 AlA~g~aD~Vlm~e~-A~~sVisPEgaAs---Il~rd~~~a~eaAe~l--kitA~d------L~-~lGiVD~IIp 357 (773)
||. +++|+++|.++ |++++.||+++.+ |+|.|..++.++++.. .+++++ .. ..|++|.|++
T Consensus 197 a~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~~~GvvD~vv~ 270 (587)
T 1pix_A 197 GYH-SISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYTETGFMREVYA 270 (587)
T ss_dssp HHH-HHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTTTSCCSCEEES
T ss_pred HHH-HhcCceEEecCCcEEEecCHHHHhhhccccccchhHHHHHHHHhCCccChhhcccHHHHHhhcCceeEecC
Confidence 999 99999999985 9999999977766 7999999999988665 344333 23 5899999995
No 17
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=99.95 E-value=1.8e-27 Score=269.24 Aligned_cols=221 Identities=22% Similarity=0.298 Sum_probs=178.1
Q ss_pred cccccchHhHHHHHHHHHhhhhhcCCChHHHHHHHHHHHHHhhhhhcCCCChhHHhhhcCCCCCCchhhhhhhhhhhhee
Q 004120 97 LDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVE 176 (773)
Q Consensus 97 LdFEkPIvel~~ki~~l~~la~~~giDlseEIq~LE~KleeL~kdI~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~E 176 (773)
=.|......+..++++|+...+.....=. ++..++ ....++||+|+||..+.|+++| |+|
T Consensus 33 ~~~~~n~~~~~~~~~~l~~~~~~~~~~gg------~~~~~~--~~~~gkltaReRI~~LlD~gS~------------F~E 92 (555)
T 3u9r_B 33 AEFAANAATMLEQVNALRTLLGRIHEGGG------SAAQAR--HSARGKLLVRERINRLLDPGSP------------FLE 92 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC------HHHHHH--HHHTTCCCHHHHHHHHSCTTCC------------EEE
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhcCC------HHHHHH--HHccCCCCHHHHHHHHcCCCCC------------EEE
Confidence 45777777788888888764322110000 111111 1135899999999999999998 777
Q ss_pred cc---CCCCCCC---CCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEec
Q 004120 177 LH---GDRAGYD---DPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFID 250 (773)
Q Consensus 177 L~---gd~~~~d---D~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLID 250 (773)
+. +.+.+.+ +++||||+|+|+|++|+|++||++ +++|++++.+++|++|++++|.++++|||+|+|
T Consensus 93 ~~~l~~~~~y~~~~~~dgVVtG~G~I~Gr~v~V~a~D~t--------v~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~d 164 (555)
T 3u9r_B 93 LSALAAHEVYGEEVAAAGIVAGIGRVEGVECMIVGNDAT--------VKGGTYYPLTVKKHLRAQAIALENRLPCIYLVD 164 (555)
T ss_dssp ECTTTTTTTSSSCCGGGGEEEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EccccccccccccCCCCcEEEEEEEECCEEEEEEEECCc--------cccCCCCHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 43 3322222 479999999999999999999997 999999999999999999999999999999999
Q ss_pred CCCCCCCHhHHHh---chHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeec-CCeeeeeCHHHHHHHhh
Q 004120 251 TPGAYADLKSEEL---GQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLE-NAVFYVASPEACAAILW 326 (773)
Q Consensus 251 TpGA~~g~~AEe~---Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e-~A~~sVisPEgaAsIl~ 326 (773)
|+|++++.+.+.. ++...|++++..++..+||+||||+|+|+|||||.++++|+++|.+ ++.+++.||......+.
T Consensus 165 SgGARl~~q~~~~~~~~~~~~i~~~~~~ls~~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i~~aGP~vik~~~g 244 (555)
T 3u9r_B 165 SGGANLPRQDEVFPDREHFGRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFLAGPPLVKAATG 244 (555)
T ss_dssp CCCBCGGGGGGTSSSTTSTTHHHHHHHHHHHTTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBCBSSCHHHHHHHHC
T ss_pred CCCCCCCCcceeecccccHHHHHHHHHHHhcCCCCEEEEEecCCCccHHHHHHhCCceEEecCCceEEEccHHHHHHHhc
Confidence 9999998776653 4667899999999999999999999999999999999999999887 69999999998887765
Q ss_pred hhccCchHHHHHhcccHHHH-------HHcCCceeeec
Q 004120 327 KSAKASPKAAEKLKITGSEL-------CKLQIADGVIP 357 (773)
Q Consensus 327 rd~~~a~eaAe~lkitA~dL-------~~lGiVD~IIp 357 (773)
. .+++++| ...|++|.|++
T Consensus 245 e------------~~~~e~LGGa~~h~~~sGv~d~v~~ 270 (555)
T 3u9r_B 245 E------------VVSAEELGGADVHCKVSGVADHYAE 270 (555)
T ss_dssp C------------CCCHHHHHBHHHHHHTTCSCSEEES
T ss_pred C------------ccChhhccchhhhhhccCceeEEeC
Confidence 2 3455556 68999999994
No 18
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=99.95 E-value=2e-26 Score=260.10 Aligned_cols=186 Identities=20% Similarity=0.293 Sum_probs=154.8
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheecc-----CCCCCC------CCCceEEEEEEECCeEEEEEEeecCCC
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELH-----GDRAGY------DDPAIVTGIGSMDGRTYMFMGHQKGRN 211 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~-----gd~~~~------dD~aVVtGlArI~GrpV~VIa~dkg~~ 211 (773)
.++||+|+||..+.|++. |+|+. ++..|+ .+++||||+|+|+|++|+|+++|++
T Consensus 44 ~g~l~areRi~~LlD~gs-------------F~E~~~~~~~~~~~f~~~~~~~~~dgvVtG~G~i~Gr~v~v~a~D~t-- 108 (527)
T 1vrg_A 44 AGKLTAWERLELLLDPGT-------------FVEIDKFVEHRNTYFGLDKVKLPRDGVITGVGEINGRKVAVFSQDFT-- 108 (527)
T ss_dssp TTCCCHHHHHHHHSCTTC-------------CEEECTTCCCCCCGGGGGGCCCGGGGEEEEEEEETTEEEEEEEECTT--
T ss_pred cCCCCHHHHHHHHccCCc-------------eEEcccccccCCcccCcccccCCCCcEEEEEEEECCEEEEEEEEecc--
Confidence 578899999999988876 77773 222221 1489999999999999999999997
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHh-chHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEEL-GQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 212 ~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~-Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
+++|++++.+++|++|++++|.++++|||+|+||+|++++.+.+.. |+++.++++ ..+ ...+|+||||+|+
T Consensus 109 ------~~gGS~g~~~~~Ki~r~~e~A~~~~lPvI~l~dSgGAR~qeg~~~l~g~~~~~~~~-~~~-s~~iP~Isvv~Gp 180 (527)
T 1vrg_A 109 ------VMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRN-TLA-SGVVPQITVIAGP 180 (527)
T ss_dssp ------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHH-HHH-TTTSCEEEEEEEE
T ss_pred ------ccCccccHHHHHHHHHHHHHHHHcCCCEEEEECCCCCCccchhHHHHHHHHHHHHH-HHh-CCCCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999888764 555544444 444 4679999999999
Q ss_pred CccchhhhccccceeeeecC-CeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHHH-HcCCceeeec
Q 004120 291 GGSGGALAIGCANKLLMLEN-AVFYVASPEACAAILWKSAKASPKAAEKLKITGSELC-KLQIADGVIP 357 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~-A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL~-~lGiVD~IIp 357 (773)
|+|||+|..+++|+++|.++ |+++++||+++...+..+. +. +.++ .++-+. ..|++|.|++
T Consensus 181 ~~GG~a~s~al~D~vi~~~~~a~i~~aGP~vi~~~~ge~v---~~--e~lg-gae~~~~~~G~vd~vv~ 243 (527)
T 1vrg_A 181 CAGGAVYSPALTDFIVMVDQTARMFITGPNVIKAVTGEEI---SQ--EDLG-GAMVHNQKSGNAHFLAD 243 (527)
T ss_dssp EBGGGGHHHHHSSEEEEETTTCBCBSSCHHHHHHHHCCCC---CH--HHHH-BHHHHHHTSCCCSEEES
T ss_pred CchHHHHHHHcCCeEEEecCceEEEecCHHHHHHHhCCCC---Cc--cccc-cHHHHhhcccceEEEec
Confidence 99999999999999999998 9999999999999886543 11 2233 555555 6999999993
No 19
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=99.94 E-value=1e-26 Score=264.61 Aligned_cols=192 Identities=17% Similarity=0.200 Sum_probs=153.8
Q ss_pred ccccchHhHHHHHHHHHhhh---hhcCCChHHHHHHHHHHHHHhhhhhcCCCChhHHhhhcCCCCCCchhhhhhhhhhhh
Q 004120 98 DFEKPLVGLSKKIMDVRKMA---NDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKF 174 (773)
Q Consensus 98 dFEkPIvel~~ki~~l~~la---~~~giDlseEIq~LE~KleeL~kdI~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF 174 (773)
.|+.-...+.+.+++|+... ...+ .-. .++. .-.++||+|+||..+.|+++ |
T Consensus 23 ~~~~n~~~~~~~~~~l~~~~~~~~~gg-~~~-----~~~~------~~~GkltaRERI~~LlD~GS-------------F 77 (588)
T 3gf3_A 23 PNPENEQEIKAVESDIHESIKKALDAG-ITS-----EEKL------NERGQLSAMQRINALIDPGT-------------W 77 (588)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCS-SSC-----HHHH------HHTTCCCHHHHHHHHSCTTC-------------C
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC-hHH-----HHHH------HhcCCCCHHHHHHHHcCCCc-------------e
Confidence 47777777777777766532 2223 111 1111 13588999999999999987 8
Q ss_pred eeccCCCCCCC----CCceEEEEEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEec
Q 004120 175 VELHGDRAGYD----DPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFID 250 (773)
Q Consensus 175 ~EL~gd~~~~d----D~aVVtGlArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLID 250 (773)
.|+++.+..++ +++||||+|+|+|++|+|++||++ +++|++++.+++|++|++++|.++++|||+|+|
T Consensus 78 ~El~~~~~~~~~~~~~dgVVtG~G~I~Gr~V~V~a~D~t--------v~gGS~g~~~~~Ki~Ra~e~A~~~~lPvI~l~d 149 (588)
T 3gf3_A 78 CPLNSLFNPENNKFGTTNIVNGLGRVDGKWVYIVASDNK--------KMAGAWVPGQAENLIRCSDAAKMMHLPLIYLLN 149 (588)
T ss_dssp EEESTTCCTTCCTTSSCSEEEEEEEETTEEEEEEEECTT--------SGGGCBCTTHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EEccccccccccCCCCCcEEEEEEEECCEEEEEEEECCc--------ccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 89887654322 479999999999999999999998 899999999999999999999999999999999
Q ss_pred CCCCCCCHhHHH---hchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeeeeCHHHHH
Q 004120 251 TPGAYADLKSEE---LGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACA 322 (773)
Q Consensus 251 TpGA~~g~~AEe---~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVisPEgaA 322 (773)
|+||+++.+.+- ..+...|++++..++..+||+||||+|+|+|||||+..++|++++.++|.+++.||+...
T Consensus 150 SgGArl~~qe~~~~~l~~~g~if~~~~~ls~~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~ 224 (588)
T 3gf3_A 150 CSGVEFPNQDKVYPNRRGGGTPFFRNSELNQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILS 224 (588)
T ss_dssp CCCBCGGGHHHHSSSTTSTTHHHHHHHHHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC---
T ss_pred CCCcCcccccccccchhhHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhc
Confidence 999999865542 333356999999999999999999999999999998445677778889999999999764
No 20
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=99.94 E-value=1.6e-25 Score=252.30 Aligned_cols=181 Identities=20% Similarity=0.302 Sum_probs=157.1
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCC-----------CCCCCceEEEEEEECCeEEEEEEeecCCC
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRA-----------GYDDPAIVTGIGSMDGRTYMFMGHQKGRN 211 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~-----------~~dD~aVVtGlArI~GrpV~VIa~dkg~~ 211 (773)
.++||+|+||..+.|+++ |.|+..... ...+++||||+|+|+|++|+|+++|++
T Consensus 51 ~gkltaReRI~~LlD~gS-------------F~E~~~~~~~~~~~~~~~~~~~~~dgVVtG~G~I~Gr~v~v~a~D~t-- 115 (531)
T 3n6r_B 51 RGKLTARERVDLLLDEGS-------------FEEFDMFVTHRCTDFNMQDQKPAGDGVVTGWGTINGRVVYVFSQDFT-- 115 (531)
T ss_dssp TTCCCHHHHHHHHSSSSC-------------CEEECTTCCCCCCGGGGGGCCCTTTTEEEEEEEETTEEEEEEEECTT--
T ss_pred cCCCCHHHHHHHhcCCCc-------------eEEcCCccccCCcccccccccCCCCCEEEEEEEECCEEEEEEEECCC--
Confidence 589999999999999988 555543211 112589999999999999999999998
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 212 ~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++|++++..++|++|++++|.++++|||+|+||+|++++.+.....+...++..+..++. .+|+||||+|+|
T Consensus 116 ------~~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dSGGARmqeg~~sl~~~~~i~~~~~~~s~-~iP~Isvv~Gp~ 188 (531)
T 3n6r_B 116 ------VLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNIMASG-VVPQISMIMGPC 188 (531)
T ss_dssp ------SGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGTHHHHHHHHHHHHHHHHTTT-TSCEEEEECSCC
T ss_pred ------cccccccHHHHHHHHHHHHHHHHcCCCEEEEeCCCccccCcccchhhhHHHHHHHHHHHhC-CCCEEEEEeCCc
Confidence 9999999999999999999999999999999999999999888777666677777777774 699999999999
Q ss_pred ccchhhhccccceeeeecC-CeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHH-------HHcCCceeeec
Q 004120 292 GSGGALAIGCANKLLMLEN-AVFYVASPEACAAILWKSAKASPKAAEKLKITGSEL-------CKLQIADGVIP 357 (773)
Q Consensus 292 ~GGGAlA~g~aD~Vlm~e~-A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL-------~~lGiVD~IIp 357 (773)
+|||+|..+++|+++|.++ |.+++.||+.+...+..+ +++++| ...|++|.|++
T Consensus 189 ~GG~a~s~a~~D~vi~~~~~a~i~~aGP~vI~~~~ge~------------v~~E~LGGa~~h~~~sG~~d~v~~ 250 (531)
T 3n6r_B 189 AGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQ------------VSAEELGGATTHTRKSSVADAAFE 250 (531)
T ss_dssp BGGGGHHHHHSSEEEEETTTCBCBSSCHHHHHHHHCCC------------CCHHHHHBHHHHHHTTSCCSEEES
T ss_pred chHHHHHhhhCCEEEEecCCceEeecCHHHHHHHhCCc------------cChhhcchHHHHhhccCcceEEeC
Confidence 9999999999999999996 999999999998877643 355566 78999999993
No 21
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=99.94 E-value=2.2e-25 Score=251.29 Aligned_cols=188 Identities=21% Similarity=0.267 Sum_probs=158.8
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCC-----------CCCCCceEEEEEEECCeEEEEEEeecCCC
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRA-----------GYDDPAIVTGIGSMDGRTYMFMGHQKGRN 211 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~-----------~~dD~aVVtGlArI~GrpV~VIa~dkg~~ 211 (773)
.++|++|+||..+.|+++ |+|++.... ...+++||||+|+|+|++|+|+++|++
T Consensus 43 ~gkl~aReRI~~LlD~gS-------------F~E~~~~~~~~~~~f~~~~~~~~~dgvVtG~G~I~Gr~v~v~a~D~t-- 107 (530)
T 3iav_A 43 KGKLTARERIDLLLDEGS-------------FVELDEFARHRSTNFGLDANRPYGDGVVTGYGTVDGRPVAVFSQDFT-- 107 (530)
T ss_dssp TTCCCHHHHHHHHSCTTC-------------CEEESTTCCCCCCGGGGGGCCCTTTTEEEEEEEETTEEEEEEEECTT--
T ss_pred cCCCCHHHHHHHhcCCCC-------------eEEcCCccccCCCCcccccccCCCCcEEEEEEEECCEEEEEEEECCC--
Confidence 589999999999999988 666653211 112589999999999999999999998
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 212 ~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++|++++..++|++|++++|.++++|||+|+|++|++++.+.....+...++.++..++.. +|+|+||+|+|
T Consensus 108 ------v~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSgGaRmqEg~~~l~~~~~i~~~~~~~s~~-iP~Isvv~G~~ 180 (530)
T 3iav_A 108 ------VFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGARIQEGVASLGAYGEIFRRNTHASGV-IPQISLVVGPC 180 (530)
T ss_dssp ------SGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHTTTT-SCEEEEECSEE
T ss_pred ------cceEeccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCcchhhhhhhHHHHHHHHHHHHHHcCC-CCEEEEEecCc
Confidence 99999999999999999999999999999999999999999888887888899999988875 99999999999
Q ss_pred ccchhhhccccceeeeecC-CeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHHHHcCCceeeec
Q 004120 292 GSGGALAIGCANKLLMLEN-AVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIP 357 (773)
Q Consensus 292 ~GGGAlA~g~aD~Vlm~e~-A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL~~lGiVD~IIp 357 (773)
+|||+|..+++|+++|+++ |.+++.||..+.+.+..+.. ++.++-..-.....|++|.+.+
T Consensus 181 ~GG~a~~~al~D~~im~~~~a~i~~aGP~vi~~~~ge~v~-----~e~LGGa~~h~~~sGv~d~va~ 242 (530)
T 3iav_A 181 AGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVG-----FEELGGARTHNSTSGVAHHMAG 242 (530)
T ss_dssp EGGGGHHHHHSSEEEEETTTCEEESSCHHHHHHHHCCCCC-----HHHHHBHHHHHHTSCCCSEEES
T ss_pred chHHHHHHHhCCEEEEecCCcEEEecCHHHHHHHhCCcCC-----hhhcchHHHHHhccCceeEEec
Confidence 9999999999999999986 99999999999887764321 1111111111257899999993
No 22
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=99.93 E-value=1.1e-24 Score=246.60 Aligned_cols=187 Identities=20% Similarity=0.226 Sum_probs=159.4
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCC-----C------CCCCceEEEEEEECCeEEEEEEeecCCC
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRA-----G------YDDPAIVTGIGSMDGRTYMFMGHQKGRN 211 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~-----~------~dD~aVVtGlArI~GrpV~VIa~dkg~~ 211 (773)
.++||+|+||..+.|+++ |.|+..... | ..+++||||+|+|+|++|+|+++|++
T Consensus 54 ~gkltareRi~~LlD~gs-------------F~E~~~~~~~~~~~f~~~~~~~~~dgvVtG~G~I~Gr~v~v~a~D~t-- 118 (548)
T 2bzr_A 54 KGKLTARERIYALLDEDS-------------FVELDALAKHRSTNFNLGEKRPLGDGVVTGYGTIDGRDVCIFSQDAT-- 118 (548)
T ss_dssp TTCCCHHHHHHHHSCTTC-------------CEEESTTCCCCCCSTTGGGCCCTTTTEEEEEEEETTEEEEEEEECTT--
T ss_pred cCCCCHHHHHHHhcCCCc-------------eEEeCCccccCCCccccccccCCCCcEEEEEEEECCEEEEEEEEcCc--
Confidence 588999999999999987 555543211 1 13589999999999999999999998
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 212 ~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++|++++..++|+.|++++|.+.++|||+|+|++|++++.+.+...+...|+.++..++. .+|+|+||+|+|
T Consensus 119 ------~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~dSGGARmqeg~~sl~~~~~i~~~~~~~s~-~iP~Isvv~gp~ 191 (548)
T 2bzr_A 119 ------VFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARIQEGVVSLGLYSRIFRNNILASG-VIPQISLIMGAA 191 (548)
T ss_dssp ------SGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCGGGTTHHHHHHHHHHHHHHHTTT-TSCEEEEECSEE
T ss_pred ------cccCCCChhHHHHHHHHHHHHHHcCCCEEEEEcCCCCCchhHHHHHHHHHHHHHHHHHhcC-CCcEEEEecCCC
Confidence 9999999999999999999999999999999999999999998888787888888888754 599999999999
Q ss_pred ccchhhhccccceeeeecC-CeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHHH-HcCCceeeec
Q 004120 292 GSGGALAIGCANKLLMLEN-AVFYVASPEACAAILWKSAKASPKAAEKLKITGSELC-KLQIADGVIP 357 (773)
Q Consensus 292 ~GGGAlA~g~aD~Vlm~e~-A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL~-~lGiVD~IIp 357 (773)
+||++|..+++|++||.++ |.+++.||+.+...+..+. +. +.+ ..++-+. ..|++|.|++
T Consensus 192 ~GG~a~s~al~D~ii~~~~~a~i~~aGP~vI~~~~ge~v---~~--e~l-ggae~h~~~sG~~d~vv~ 253 (548)
T 2bzr_A 192 AGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGEEV---TM--EEL-GGAHTHMAKSGTAHYAAS 253 (548)
T ss_dssp ESGGGHHHHHSSEEEEETTTCEEESSCHHHHHHHHCCCC---CH--HHH-HBHHHHHHTSSCCSEEES
T ss_pred chHHHHHHHhCCeEEeccCceeEEeccHHHHHHHhCCcC---Ch--Hhc-ccHHHHhhccCceeEEeC
Confidence 9999999999999999997 9999999999999886532 11 111 2333344 6999999993
No 23
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.92 E-value=1.7e-24 Score=244.12 Aligned_cols=187 Identities=19% Similarity=0.187 Sum_probs=159.3
Q ss_pred cCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCC-----C------CCCCceEEEEEEECCeEEEEEEeecCCC
Q 004120 143 YTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRA-----G------YDDPAIVTGIGSMDGRTYMFMGHQKGRN 211 (773)
Q Consensus 143 ~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~-----~------~dD~aVVtGlArI~GrpV~VIa~dkg~~ 211 (773)
.++||+|+||..+.|+++ |.|+..... | ..+++||||+|+|+|++|+|+++|++
T Consensus 41 ~g~l~areRi~~LlD~gs-------------F~E~~~~~~~~~~~f~l~~~~~~~dgvvtG~G~I~Gr~v~v~a~D~t-- 105 (523)
T 1on3_A 41 QGKQTARERLNNLLDPHS-------------FDEVGAFRKHRTTLFGMDKAVVPADGVVTGRGTILGRPVHAASQDFT-- 105 (523)
T ss_dssp TTCCCHHHHHHHHSCTTC-------------CEEECTTCCCCCCTTTTTTCCCGGGGEEEEEEEETTEEEEEEEECTT--
T ss_pred cCCCCHHHHHHHhcCCCc-------------cEEeCCccccCCCccccccccCCCCcEEEEEEEECCEEEEEEEEcCC--
Confidence 688999999999999987 555543211 1 12589999999999999999999998
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 212 ~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++|++++..++|+.|++++|.+.++|+|+|+|++|++++.+.....+...++..+..++. .+|+||||+|+|
T Consensus 106 ------~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGGARmqeg~~sl~~~~~i~~~~~~~s~-~iP~Isvv~gp~ 178 (523)
T 1on3_A 106 ------VMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARIQEGIDSLSGYGKMFFANVKLSG-VVPQIAIIAGPC 178 (523)
T ss_dssp ------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEEE
T ss_pred ------ccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCChhhHHHHHHHHHHHHHHHHHhcC-CCCEEEEEcCCC
Confidence 9999999999999999999999999999999999999999998888787888888887754 599999999999
Q ss_pred ccchhhhccccceeeeecCCeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHHH-HcCCceeeec
Q 004120 292 GSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELC-KLQIADGVIP 357 (773)
Q Consensus 292 ~GGGAlA~g~aD~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL~-~lGiVD~IIp 357 (773)
+||++|..+++|+++|.++|.+++.||+.+...+..+. +. +.+ .+++-+. ..|++|.|++
T Consensus 179 ~GG~a~s~~l~D~ii~~~~a~i~~aGP~vI~~~~ge~~---~~--e~l-ggae~h~~~~G~vd~vv~ 239 (523)
T 1on3_A 179 AGGASYSPALTDFIIMTKKAHMFITGPQVIKSVTGEDV---TA--DEL-GGAEAHMAISGNIHFVAE 239 (523)
T ss_dssp ESGGGHHHHHSSEEEEETTCEEESSCHHHHHHHHCCCC---CH--HHH-HSHHHHHHTTCCCSEEES
T ss_pred chHHHHHHhhCCeEEEeCCCEEEecCHHHHHHHhCCcC---Ch--Hhc-ccHHHHhhccCceEEEeC
Confidence 99999999999999999999999999999999886532 11 111 2344344 6999999993
No 24
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=99.92 E-value=4e-24 Score=241.19 Aligned_cols=188 Identities=20% Similarity=0.205 Sum_probs=158.9
Q ss_pred hcCCCChhHHhhhcCCCCCCchhhhhhhhhhhheeccCCCC-----------CCCCCceEEEEEEECCeEEEEEEeecCC
Q 004120 142 LYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRA-----------GYDDPAIVTGIGSMDGRTYMFMGHQKGR 210 (773)
Q Consensus 142 I~~~Lt~weRV~l~Rdp~RP~~~d~I~~l~DdF~EL~gd~~-----------~~dD~aVVtGlArI~GrpV~VIa~dkg~ 210 (773)
-.++||+|+||..+.|+++ |.|+..... ...+++||||+|+|+|++|+|+++|++
T Consensus 36 ~~g~l~areRi~~LlD~gs-------------f~E~~~~~~~~~~~f~~~~~~~~~dgvvtG~G~i~Gr~v~v~a~D~t- 101 (522)
T 1x0u_A 36 SKGKLTARERLALLFDDGK-------------FNEIMTFATTRATEFGLDKQRFYGDGVVTGWGKVDGRTVFAYAQDFT- 101 (522)
T ss_dssp TTTCCCHHHHHHHHSSSSC-------------CEESSSSCCCCCCGGGTTTCCCTTTTEEEEEEEETTEEEEEEEECTT-
T ss_pred hcCCCCHHHHHHHhccCCc-------------cEEeCCcccCCCCccccccccCCCCcEEEEEEEECCEEEEEEEecCc-
Confidence 3688999999999999987 555543211 113589999999999999999999998
Q ss_pred CccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 211 NTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 211 ~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
+++|++++...+|+.|++++|.+.++|+|.|+|++|++++.+.....+...++..+..++ ..+|+|+||+|+
T Consensus 102 -------~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGGaRmqeg~~sl~~~~~i~~~~~~~s-~~iP~Isvv~gp 173 (522)
T 1x0u_A 102 -------VLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKMNVMAS-GVIPQITIMAGP 173 (522)
T ss_dssp -------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHHT-TTSCEEEEECSE
T ss_pred -------eeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEcCC
Confidence 999999999999999999999999999999999999999999888877778888888775 459999999999
Q ss_pred CccchhhhccccceeeeecC-C-eeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHHH-HcCCceeeec
Q 004120 291 GGSGGALAIGCANKLLMLEN-A-VFYVASPEACAAILWKSAKASPKAAEKLKITGSELC-KLQIADGVIP 357 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~-A-~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL~-~lGiVD~IIp 357 (773)
|+||++|..+++|+++|.++ | .+++.||..+...+..+. +. +.+ ..++-+. ..|++|.|++
T Consensus 174 ~~GG~a~s~~l~D~~i~~~~~a~~i~~aGP~vI~~~~ge~~---~~--e~l-ggae~~~~~~G~~d~vv~ 237 (522)
T 1x0u_A 174 AAGGAVYSPALTDFIIMIKGDAYYMFVTGPEITKVVLGEEV---SF--QDL-GGAVVHATKSGVVHFMVD 237 (522)
T ss_dssp EEGGGGHHHHHSSEEEEECSTTCEEESSCHHHHHHTTCCCC---CH--HHH-HBHHHHHHTTCCCSEEES
T ss_pred CchHHHHHHhcCCeEEEecCCccEEEecCHHHHHHHhCCcC---Ch--hhc-chHHHHhhcCceeEEEeC
Confidence 99999999999999999998 9 999999999998876432 11 111 2344344 6999999993
No 25
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=99.86 E-value=3.9e-22 Score=232.33 Aligned_cols=189 Identities=17% Similarity=0.155 Sum_probs=149.9
Q ss_pred hcCCCCCCchhhhhhhhhhh---heeccCCCCCCCCCceEEEEE------EECCeEEEEEEeecCCCccccccccCCCCC
Q 004120 154 IARHPNRPTFLDHVFNITEK---FVELHGDRAGYDDPAIVTGIG------SMDGRTYMFMGHQKGRNTKENIQRNFGMPT 224 (773)
Q Consensus 154 l~Rdp~RP~~~d~I~~l~Dd---F~EL~gd~~~~dD~aVVtGlA------rI~GrpV~VIa~dkg~~~~e~~~~ngG~~~ 224 (773)
..+||.++ .++++.++|+ |+|+++..+ .+|.++|+|++ +++|++|+|++||++ +++|+++
T Consensus 70 ~~~~~~~~--l~~~elllD~~gsf~E~~~~~~-~~~~GmV~g~~~~~t~~~~~Gr~vvVianD~t--------~~gGS~g 138 (793)
T 2x24_A 70 PDKYPKDI--LTYTELVLDPQGQLVEMNRLPG-GNEVGMVAFKMTLKTLEYPEGRDIILISNDIT--------FRIGSFG 138 (793)
T ss_dssp SSCCCTTS--EEEEEEEECTTSCEECCCCCTT-CCSSSEEEEEEEECCSSCTTCEEEEEEEECSS--------GGGGCBC
T ss_pred cccCCCCc--hhHHHHhcCCCCCEEEeCCccC-CCCCCeeeeeecccCccccCCeEEEEEEECCc--------ccCCCCC
Confidence 34667664 5556678886 999997655 46789999998 679999999999997 9999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCCHhHHH---------------hch----------HHH-----------
Q 004120 225 PHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEE---------------LGQ----------GEA----------- 268 (773)
Q Consensus 225 peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g~~AEe---------------~Gq----------a~a----------- 268 (773)
|.+++|+.|++++|.++++|+|+|+||+||++|...+. .|+ ++.
T Consensus 139 ~~~~~K~~ra~elA~~~glP~I~l~dsgGARig~~ee~~sl~qma~~d~~~p~~G~~~~yl~~~~~~~~sa~~~v~~~~~ 218 (793)
T 2x24_A 139 PGEDLLYLRASELARAEGIPRVYLAANSGARIGLAEEIKHMFQVAWVDPEDPHKGIKYLYLTPQDYTRISSLNSVHCKHV 218 (793)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCCCBCCCCCHHHHTTCEEEESSSSCSTTCEEEEEECHHHHHHTTTSCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCccchhhhhhhhcccccCccCcccchheeccchhHHHhhhcccccccccc
Confidence 99999999999999999999999999999999865554 232 111
Q ss_pred -------------------HHHHHHHHhC----------CCCcEEEEEcCCCccchhhhccccceeeeecCCeeeeeCHH
Q 004120 269 -------------------IAHNLRTMFG----------LKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPE 319 (773)
Q Consensus 269 -------------------IAr~L~ams~----------l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVisPE 319 (773)
|+.....+++ ..||+||||+|+|+|||||..+++|+++|.+++.+++.||+
T Consensus 219 ~~~ge~~~~i~~i~g~~~~i~v~~l~~SG~iag~~s~a~~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~ltGp~ 298 (793)
T 2x24_A 219 EEDGESRYVITDIIGKEEGLGVENLRGSGMIAGETSQDYDEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIILTGAT 298 (793)
T ss_dssp EETTEEEEEEEEECCSSSSSSTHHHHHHHHHHHHHHHHHHHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEESSCHH
T ss_pred ccccccceeeeccccccchHHHHHHHhccchhhccccccCCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEecCHH
Confidence 2222222332 36999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhccCchHHHHHhcccHHHHHHcCCceeeec
Q 004120 320 ACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIP 357 (773)
Q Consensus 320 gaAsIl~rd~~~a~eaAe~lkitA~dL~~lGiVD~IIp 357 (773)
++..++.++.-..++ .++ .++-++..|++|.|++
T Consensus 299 vi~~~~Ge~vy~s~e---~LG-Ga~v~~~~Gv~d~vv~ 332 (793)
T 2x24_A 299 ALNKVLGRDVYTSNN---QLG-GVQIMHHNGVSHVTVP 332 (793)
T ss_dssp HHHHHHSSCCCSCHH---HHH-SHHHHTTTTSCSEEES
T ss_pred HHHHhcCCcccCChh---hhc-cHHHHHhcCceEEEeC
Confidence 999999876521221 111 2223677999999994
No 26
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.76 E-value=9.9e-18 Score=194.29 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=129.0
Q ss_pred CCCCCCceEEEEEEE------CCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCC
Q 004120 182 AGYDDPAIVTGIGSM------DGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAY 255 (773)
Q Consensus 182 ~~~dD~aVVtGlArI------~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~ 255 (773)
.+.+|.++|+|.+++ +|++|+|+++|++ +++|++|+.+++|+.|++++|.++++|+|+|+|++||+
T Consensus 82 ~G~nd~gmV~g~~~l~t~e~i~G~~vvV~a~D~t--------~~gGS~G~~~~eKi~Ra~e~A~~~~lPvI~l~dSGGAR 153 (758)
T 3k8x_A 82 PGANAIGMVAFKITVKTPEYPRGRQFVVVANDIT--------FKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGAR 153 (758)
T ss_dssp TTCCSSSEEEEEEEECCSSCTTCEEEEEEEECTT--------SGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBC
T ss_pred CCCCCceEEEEEEEECCccccCCeEEEEEEECCc--------cccccCcHHHHHHHHHHHHHHHHcCCCEEEEecCCCcC
Confidence 356789999999998 9999999999997 99999999999999999999999999999999999999
Q ss_pred CCHhHHHh---------------ch---------H---------------------------------------------
Q 004120 256 ADLKSEEL---------------GQ---------G--------------------------------------------- 266 (773)
Q Consensus 256 ~g~~AEe~---------------Gq---------a--------------------------------------------- 266 (773)
++.+.|-. |. .
T Consensus 154 mqe~~ev~~~~~v~w~d~~~~~~G~~~ly~~q~~~~~ls~~g~~~~vi~~~~~~~ge~r~~I~~I~G~~~~~gv~~l~~s 233 (758)
T 3k8x_A 154 IGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVECLRGS 233 (758)
T ss_dssp CCCCGGGTTTCEEEESSTTCGGGCEEEEEECHHHHHHHHHTTCGGGEEEEEEEETTEEEEEEEEECCSSSCSSHHHHHHH
T ss_pred ccccchhccccccccccccchhcccceeccCHHHHHHhhhccccccceeeeeccCCceeeeEeeeeccccchhhhhcccc
Confidence 98665411 10 1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeeeeCHHHHHHHhhhhccCchHHHHHhcccHHHH
Q 004120 267 EAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSEL 346 (773)
Q Consensus 267 ~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVisPEgaAsIl~rd~~~a~eaAe~lkitA~dL 346 (773)
+.||....... ..+|+||||+|+|+|||||..+++|+++|.+++.+++.||....+.+..+....++ .++ .++-.
T Consensus 234 G~iag~~s~a~-~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~ifltGP~vIk~~tGeeV~~s~e---eLG-GA~vh 308 (758)
T 3k8x_A 234 GLIAGATSRAY-HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSNL---QLG-GTQIM 308 (758)
T ss_dssp HHHHHHHHHHH-TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESSCHHHHHHHHTSCCCSCTH---HHH-SHHHH
T ss_pred chhhhhhhhhh-cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEeCHHHHHHHhCCccccCch---hcc-hhhHH
Confidence 11111122222 36899999999999999999999999999999999999999999988764421111 111 12223
Q ss_pred HHcCCceeeec
Q 004120 347 CKLQIADGVIP 357 (773)
Q Consensus 347 ~~lGiVD~IIp 357 (773)
...|++|-+.+
T Consensus 309 ~~sGvad~va~ 319 (758)
T 3k8x_A 309 YNNGVSHLTAV 319 (758)
T ss_dssp TTTTSSSEEES
T ss_pred HhcCCeeEEec
Confidence 47899999984
No 27
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=98.84 E-value=9.1e-08 Score=97.89 Aligned_cols=160 Identities=11% Similarity=0.046 Sum_probs=108.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEec-CCCCCC-CHhHHHh----------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFID-TPGAYA-DLKSEEL----------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLID-TpGA~~-g~~AEe~----------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.++...+.++.++. ..+-+|.|.- .++++. |.+..+. .....+.+.+..+..+++|+|+.
T Consensus 21 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAa 100 (250)
T 2a7k_A 21 HNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAA 100 (250)
T ss_dssp TCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357899999999999987765 4677887776 555544 3222111 11122445567788899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||......||+++|.++++|+. +.|.+... .+........+.+ ...++|+++++.|+||+|+
T Consensus 101 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv 179 (250)
T 2a7k_A 101 VDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVV 179 (250)
T ss_dssp ECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEEE
T ss_pred ECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHHHcCCcccHHHHHHcCCcceec
Confidence 99999999999888999999999999876 34544444 3333222223333 2478999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
| +++ +..........|...|+..+
T Consensus 180 ~---------~~~----l~~~a~~~a~~la~~~~~a~ 203 (250)
T 2a7k_A 180 E---------SSA----LLDAAITQAHVMASYPASAF 203 (250)
T ss_dssp C---------HHH----HHHHHHHHHHHHHTSCHHHH
T ss_pred C---------HHH----HHHHHHHHHHHHHcCCHHHH
Confidence 4 322 33334444566677776554
No 28
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=98.83 E-value=2e-08 Score=102.97 Aligned_cols=127 Identities=22% Similarity=0.249 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhcC-CcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEE---cCCCccchh
Q 004120 221 GMPTPHGYRKALRMMYYADHHG-FPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIV---IGEGGSGGA 296 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf~-LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVV---iGeg~GGGA 296 (773)
|.+++..+....+.++.|+..+ .+||..+||||..+. +.......+...++|+|+.| .|.+.|||+
T Consensus 17 g~I~~~~~~~l~~~l~~a~~~~~~~Ivl~inspGG~v~----------~~~~i~~~i~~~~~PVia~v~p~~G~AasaG~ 86 (230)
T 3viv_A 17 GQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRAD----------AMMNIVQRIQQSKIPVIIYVYPPGASAASAGT 86 (230)
T ss_dssp SCBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCEEHH----------HHHHHHHHHHTCSSCEEEEECSTTCEEETHHH
T ss_pred CEECHHHHHHHHHHHHHHhcCCCCEEEEEEeCCCcCHH----------HHHHHHHHHHhCCCCEEEEEecCCCEEhHHHH
Confidence 6788999999889888776544 567888999995432 22334445567899999999 999999999
Q ss_pred hhccccceeeeecCCeeeeeCHH------HHH---------------HHhh----hhccCchHHH-HHhcccHHHHHHcC
Q 004120 297 LAIGCANKLLMLENAVFYVASPE------ACA---------------AILW----KSAKASPKAA-EKLKITGSELCKLQ 350 (773)
Q Consensus 297 lA~g~aD~Vlm~e~A~~sVisPE------gaA---------------sIl~----rd~~~a~eaA-e~lkitA~dL~~lG 350 (773)
+....||+++|.|++.++...|- |.+ ..+- ++...+.++. ...-+||++.++.|
T Consensus 87 ~ia~a~d~~~a~p~a~ig~~~p~~~~~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~~a~~~~~~~~~ltA~EAle~G 166 (230)
T 3viv_A 87 YIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYG 166 (230)
T ss_dssp HHHHTSSEEEECTTCEEECCCEEEEECTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCEECHHHHHHTT
T ss_pred HHHHhcCceeECCCCEEEeccceecCCCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhcCCeecHHHHHHcC
Confidence 99999999999999999865443 110 0111 1111122222 22468999999999
Q ss_pred Cceeeec
Q 004120 351 IADGVIP 357 (773)
Q Consensus 351 iVD~IIp 357 (773)
+||.|++
T Consensus 167 liD~V~~ 173 (230)
T 3viv_A 167 VIEVVAR 173 (230)
T ss_dssp SCSEECS
T ss_pred CceEecC
Confidence 9999994
No 29
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.79 E-value=1.3e-07 Score=99.46 Aligned_cols=160 Identities=19% Similarity=0.235 Sum_probs=108.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCC-CHhHHHh-------------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 221 GMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEEL-------------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~-g~~AEe~-------------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
.+++++.+....++++.++....-+|.|.-.+++++ |.+..+. .....+...+..+..+++|+|+.
T Consensus 46 Nal~~~m~~~L~~al~~~~~d~~r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 125 (291)
T 2fbm_A 46 NALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVS 125 (291)
T ss_dssp TCBCHHHHHHHHHHHHHHHHSSCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCeEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578999999999999877654445777776665554 3222111 01122345566778899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||......||++||.++|+|+. +.|.++.+..+........+.+. ..++|+++++.|+||+|+
T Consensus 126 V~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el~ltg~~i~A~eA~~~GLV~~vv 205 (291)
T 2fbm_A 126 VNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVF 205 (291)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEEHHHHHHTTSCSEEE
T ss_pred ECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHHHHHcCCccCHHHHHHCCCcceec
Confidence 99999999999888999999999999886 44544444333322222333333 268999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|.. + +..........|...|+..+
T Consensus 206 ~~~------~-------l~~~a~~~a~~la~~~p~a~ 229 (291)
T 2fbm_A 206 LTG------T-------FTQEVMIQIKELASYNPIVL 229 (291)
T ss_dssp CST------T-------SHHHHHHHHHHHTTSCHHHH
T ss_pred Chh------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 542 2 23334444567778887765
No 30
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=98.79 E-value=1.3e-07 Score=98.58 Aligned_cols=160 Identities=18% Similarity=0.309 Sum_probs=106.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh-----c--------hHHHHHHHHHHHhCCCCcEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL-----G--------QGEAIAHNLRTMFGLKVPII 284 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~-----G--------qa~aIAr~L~ams~l~VP~I 284 (773)
..+++++.++...+.++.++. ..+ +|.|.-.+++++ |.+..+. . ....+.+.+..+..+++|+|
T Consensus 47 ~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 125 (280)
T 2f6q_A 47 KNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLI 125 (280)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 357899999999999977654 567 777776554443 2111110 0 11233455677889999999
Q ss_pred EEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCcee
Q 004120 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADG 354 (773)
Q Consensus 285 SVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~ 354 (773)
+.|.|.|.|||......||+++|.++++|+. +.|.++....+........+.+. ..++|+++++.|+||+
T Consensus 126 Aav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~ 205 (280)
T 2f6q_A 126 AVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTE 205 (280)
T ss_dssp EEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSE
T ss_pred EEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcce
Confidence 9999999999998888899999999999886 34444333332222222223332 3689999999999999
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 355 VIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 355 IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+|.. + +..........|...|+..+
T Consensus 206 vv~~~------~-------l~~~a~~~a~~la~~~~~a~ 231 (280)
T 2f6q_A 206 VFPDS------T-------FQKEVWTRLKAFAKLPPNAL 231 (280)
T ss_dssp EECTT------T-------HHHHHHHHHHHHTTSCHHHH
T ss_pred EECHH------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 99532 2 33334444566777777654
No 31
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=98.78 E-value=1.3e-07 Score=97.08 Aligned_cols=162 Identities=15% Similarity=0.151 Sum_probs=112.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh--------chHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL--------GQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~--------Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.++.....++.++. ..+-+|.|.-.++++. |.+..+. .......+.+..+..+++|+|+.|.|
T Consensus 21 ~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 100 (254)
T 3hrx_A 21 LNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNG 100 (254)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 357999999999999976654 5677888877766555 2221111 11234556777889999999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
.|+|||.-....||++||.++++|+. +.|.++.+..+........+.+. ..++|+++++.|+||+|+|..
T Consensus 101 ~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~ 180 (254)
T 3hrx_A 101 VAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp EEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred EeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcccCHHHHHHCCCeEEecCcH
Confidence 99999999888999999999999876 33444333333222222233332 378999999999999999543
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
.+..........|...|+..+.
T Consensus 181 -------------~l~~~a~~~a~~la~~~~~a~~ 202 (254)
T 3hrx_A 181 -------------KLMEEALSLAKELAQGPTRAYA 202 (254)
T ss_dssp -------------GHHHHHHHHHHHHHTSCHHHHH
T ss_pred -------------HHHHHHHHHHHHhhccchHHHH
Confidence 2344444555667777776643
No 32
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.78 E-value=1.3e-07 Score=97.41 Aligned_cols=160 Identities=21% Similarity=0.241 Sum_probs=107.6
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCC-HhHHHh-------------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 221 GMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYAD-LKSEEL-------------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g-~~AEe~-------------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
.+++++.+....+.++.++....-+|.|.-+++++.. .+..+. .....+...+..+..+++|+|+.
T Consensus 28 Nal~~~~~~~L~~al~~~~~d~~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 107 (261)
T 2gtr_A 28 NSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVA 107 (261)
T ss_dssp TEECHHHHHHHHHHHHHHHHSSCSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCEEEEEecCCCccccccCchhhhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 5688999999999988776544456666666655552 222111 01122345566778899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||......||+++|.++++|+. +.|.++.+..+........+.+. ..++|+++++.|+||+|+
T Consensus 108 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv 187 (261)
T 2gtr_A 108 VNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVF 187 (261)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEE
T ss_pred ECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccccc
Confidence 99999999998888899999999999885 44554444433322222223232 368999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|.. .+..........|...|+..+
T Consensus 188 ~~~-------------~l~~~a~~~a~~la~~~p~a~ 211 (261)
T 2gtr_A 188 WPG-------------TFTQEVMVRIKELASCNPVVL 211 (261)
T ss_dssp CGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred Chh-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 532 233334444566777787665
No 33
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=98.77 E-value=1.3e-07 Score=96.06 Aligned_cols=160 Identities=9% Similarity=0.059 Sum_probs=110.1
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 221 GMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
.+++++.++...+.++.++...+-+|.|.-.++++. |.+..+ ........+.+..+..+++|+|+.|.|.
T Consensus 26 Nal~~~~~~~L~~al~~~~~d~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 105 (233)
T 3r6h_A 26 NVLGPTMQQALNEAIDAADRDNVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACTGH 105 (233)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCc
Confidence 568999999999999877665666777766554443 222111 1122344566778889999999999999
Q ss_pred CccchhhhccccceeeeecCCeeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
+.|||......||+++|.++++|+. .+|.+....+.+.. ....+.+. ..++|+++++.|+||+|+|..
T Consensus 106 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~-g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 184 (233)
T 3r6h_A 106 AIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRL-TPSAYQQAAGLAKTFFGETALAAGFIDEISLPE 184 (233)
T ss_dssp EETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHS-CHHHHHHHHHSCCEECHHHHHHHTSCSEECCGG
T ss_pred chHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHh-CHHHHHHHHHcCCcCCHHHHHHcCCCcEeeCHH
Confidence 9999998888899999999999885 35555554443322 22223232 368999999999999999532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
.+..........|...|+..+.
T Consensus 185 -------------~l~~~a~~~a~~la~~~~~a~~ 206 (233)
T 3r6h_A 185 -------------VVLSRAEEAAREFAGLNQQAHN 206 (233)
T ss_dssp -------------GHHHHHHHHHHHHHTSCHHHHH
T ss_pred -------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 2333344455667777776643
No 34
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=98.76 E-value=1.5e-07 Score=96.64 Aligned_cols=162 Identities=15% Similarity=0.151 Sum_probs=110.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh--------chHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL--------GQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~--------Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.+....+.++.++. -.+-+|.|.-.++++. |.+..+. .....+.+.+..+..+++|+|+.|.|
T Consensus 21 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 100 (254)
T 3gow_A 21 LNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNG 100 (254)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 356899999999999976654 4577787777665554 3222111 11123556777889999999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
.+.|||+.....||+++|.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 101 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 180 (254)
T 3gow_A 101 VAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAE 180 (254)
T ss_dssp EEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred eeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCEecCHH
Confidence 99999999888999999999999885 33433333332222222223222 368999999999999999532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
.+..........|...|+..+.
T Consensus 181 -------------~l~~~a~~~a~~la~~~~~a~~ 202 (254)
T 3gow_A 181 -------------KLMEEALSLAKELAQGPTRAYA 202 (254)
T ss_dssp -------------GHHHHHHHHHHHHHTSCHHHHH
T ss_pred -------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 2334444455677777877653
No 35
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=98.76 E-value=1.4e-07 Score=97.90 Aligned_cols=162 Identities=10% Similarity=0.092 Sum_probs=107.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhch--------------------HHHHHHHHHHHh
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQ--------------------GEAIAHNLRTMF 277 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gq--------------------a~aIAr~L~ams 277 (773)
..+++++.+....++++.++. ..+-+|.|.-.+++++ |.+..+... ...+.+.+..+.
T Consensus 25 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 104 (275)
T 1dci_A 25 RNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIE 104 (275)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 457999999999999987765 4677777776665554 322211100 112334456677
Q ss_pred CCCCcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCc-hHHHHH----hcccHHHH
Q 004120 278 GLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKAS-PKAAEK----LKITGSEL 346 (773)
Q Consensus 278 ~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a-~eaAe~----lkitA~dL 346 (773)
.+++|+|+.|.|.++|||+.....||+++|.++++|++ +.|.+..+..+...... ..+.+. ..++|+++
T Consensus 105 ~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~l~ltg~~~~a~eA 184 (275)
T 1dci_A 105 KCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEA 184 (275)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHH
T ss_pred hCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHHHHHcCCCCCHHHH
Confidence 89999999999999999999888999999999999886 33444333333333333 333332 36899999
Q ss_pred HHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 347 CKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 347 ~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
++.|+||+|+|. +++ +..........|...|+..+
T Consensus 185 ~~~GLv~~vv~~--------~~~----l~~~a~~~a~~la~~~p~a~ 219 (275)
T 1dci_A 185 LDSGLVSRVFPD--------KDV----MLNAAFALAADISSKSPVAV 219 (275)
T ss_dssp HHHTSSSEEESS--------HHH----HHHHHHHHHHHHHHSCHHHH
T ss_pred HHcCCcceecCC--------hHH----HHHHHHHHHHHHHhCCHHHH
Confidence 999999999953 122 22333334455666666554
No 36
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=98.76 E-value=1.4e-07 Score=97.87 Aligned_cols=163 Identities=9% Similarity=0.074 Sum_probs=112.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh------------chHHHHHHHHHHHhCCCCcEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL------------GQGEAIAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~------------Gqa~aIAr~L~ams~l~VP~IS 285 (773)
..+++++.++...+.++.++. ..+-+|.|.-.++++.. .+.... .....+...+..+..+++|+|+
T Consensus 25 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 104 (268)
T 3i47_A 25 HNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIA 104 (268)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 356999999999999987654 45778888776665553 222111 1123445667778889999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGV 355 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~I 355 (773)
.|.|.|.|||......||++||.++++|+. +.|.++...+.+. .....+.+. ..++|+++++.|+||+|
T Consensus 105 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~-vG~~~A~~llltg~~i~A~eA~~~GLV~~v 183 (268)
T 3i47_A 105 MVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRA-IGERAAKMLFMSAEVFDATRAYSLNLVQHC 183 (268)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHH-HCHHHHHHHHHHCCEEEHHHHHHTTSCSEE
T ss_pred EECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHHHHHHH-hCHHHHHHHHHcCCccCHHHHHHcCCCcEe
Confidence 999999999998888899999999999875 3454444443322 222223332 37899999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 004120 356 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKH 396 (773)
Q Consensus 356 IpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~~ 396 (773)
+|.. .+..........|...|+..+...
T Consensus 184 v~~~-------------~l~~~a~~~a~~la~~~~~a~~~~ 211 (268)
T 3i47_A 184 VPDD-------------TLLEFTLKYASQISNNAPEAVKNS 211 (268)
T ss_dssp ECGG-------------GHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred eChh-------------HHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9532 344445555567778888775433
No 37
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=98.75 E-value=1.6e-07 Score=97.08 Aligned_cols=162 Identities=11% Similarity=0.114 Sum_probs=108.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCC-C-CHhHHH-------------hchHHHHHHHHHHHhCCCCcE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAY-A-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~-~-g~~AEe-------------~Gqa~aIAr~L~ams~l~VP~ 283 (773)
..+++++.++...+.++.++. -.+-+|.|.-.++++ . |.+..+ ......+...+..+..+++|+
T Consensus 25 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 104 (263)
T 3lke_A 25 KNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVT 104 (263)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 356999999999999987664 456677777665554 2 221111 111233455677888999999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD 353 (773)
|+.|.|.|.|||......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||
T Consensus 105 IAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~ 184 (263)
T 3lke_A 105 VALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLIQ 184 (263)
T ss_dssp EEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSS
T ss_pred EEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCCc
Confidence 99999999999999888999999999999885 23333222222222122222222 368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|+| ++++ +..........|...|+..+
T Consensus 185 ~vv~--------~~~~----l~~~a~~~a~~la~~~~~a~ 212 (263)
T 3lke_A 185 EICE--------NKQE----LQERVKNYLKAVSEGYVPAI 212 (263)
T ss_dssp EEES--------SHHH----HHHHHHHHHHHHHTSCHHHH
T ss_pred EecC--------ChhH----HHHHHHHHHHHHHhCCHHHH
Confidence 9994 1333 33334445567777777664
No 38
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=98.74 E-value=1.6e-07 Score=96.94 Aligned_cols=160 Identities=13% Similarity=0.111 Sum_probs=107.0
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHH----------hchHHHHHHHHHHHhCCCCcEEEEEc
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEE----------LGQGEAIAHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe----------~Gqa~aIAr~L~ams~l~VP~ISVVi 288 (773)
.+++++.+....++++.++. -.+-+|.|.-.++++.. .+..+ ..........+..+..+++|+|+.|.
T Consensus 27 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 106 (261)
T 3pea_A 27 NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIH 106 (261)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 67999999999999987654 45778888776655542 22111 11112223456678899999999999
Q ss_pred CCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecC
Q 004120 289 GEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 289 Geg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
|.+.|||......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|.
T Consensus 107 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 186 (261)
T 3pea_A 107 GAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAE 186 (261)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred CeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence 999999998888899999999999885 33433333222222222223232 36899999999999999953
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 359 PLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 359 ~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
. .+..........|...|+..+
T Consensus 187 ~-------------~l~~~a~~~a~~la~~~~~a~ 208 (261)
T 3pea_A 187 E-------------TFLDDTLKVAKQIAGKSPATA 208 (261)
T ss_dssp G-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred H-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 2 233333344466777777764
No 39
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.73 E-value=4.9e-07 Score=92.65 Aligned_cols=138 Identities=15% Similarity=0.150 Sum_probs=95.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh------c---hHH--H-HHHHHHHHhCCCCcEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL------G---QGE--A-IAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~------G---qa~--a-IAr~L~ams~l~VP~IS 285 (773)
..+++++.+....+.++.++. ..+-+|.|.-.++++. |.+.... + ... . +...+..+..+++|+|+
T Consensus 20 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA 99 (253)
T 1uiy_A 20 RNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVA 99 (253)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 357999999999999987765 4566777766554444 2221110 0 001 1 34556677889999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGV 355 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~I 355 (773)
.|.|.+.|||......||+++|.++++|+. +.|.+. +..+........+.+ ...++|+++++.|+||+|
T Consensus 100 av~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v 178 (253)
T 1uiy_A 100 AVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI 178 (253)
T ss_dssp EECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSEE
T ss_pred EECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCccee
Confidence 999999999999888999999999999886 445554 433333222223333 247899999999999999
Q ss_pred ecC
Q 004120 356 IPE 358 (773)
Q Consensus 356 IpE 358 (773)
+|.
T Consensus 179 v~~ 181 (253)
T 1uiy_A 179 APP 181 (253)
T ss_dssp ECT
T ss_pred cCh
Confidence 953
No 40
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=98.73 E-value=2.8e-07 Score=94.85 Aligned_cols=159 Identities=10% Similarity=0.079 Sum_probs=110.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCC-HhHHH---------hchHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYAD-LKSEE---------LGQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g-~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.++...+.++.++.-.+-+|.|.-.++++.. .+..+ ......+...+..+..+++|+|+.|.|
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 107 (254)
T 3isa_A 28 RNALSAELVEALIDGVDAAHREQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHG 107 (254)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 45789999999999998776667778888777655542 21111 011123445677888999999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
.+.|||......||+++|.++++|+. +.| |.. . +........+.+. ..++|+++++.|+||+|+|..
T Consensus 108 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p-g~~-~-l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 184 (254)
T 3isa_A 108 RNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL-GTR-R-FRDIVGADQALSILGSARAFDADEARRIGFVRDCAAQA 184 (254)
T ss_dssp EEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC-SHH-H-HHHHHCHHHHHHHHTTTCEEEHHHHHHTTSSSEECCGG
T ss_pred eEeecchhHHHhCCEEEEcCCCEEECchhccCccH-HHH-H-HHHHcCHHHHHHHHHhCCCCcHHHHHHCCCccEEeChh
Confidence 99999999888899999999999885 233 221 1 2221222223332 368999999999999999532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
.+..........+...|+..+.
T Consensus 185 -------------~l~~~a~~~a~~la~~~~~a~~ 206 (254)
T 3isa_A 185 -------------QWPALIDAAAEAATALDPATRA 206 (254)
T ss_dssp -------------GHHHHHHHHHHHHTTSCHHHHH
T ss_pred -------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 3455566666788888887754
No 41
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=98.72 E-value=1.4e-07 Score=97.66 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=106.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-CCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-GAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-GA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.++...+.++.++. ..+=+|.|.-.+ ++++ |.+..+ ......+...+..+..+++|+|+.|
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 109 (265)
T 3kqf_A 30 ANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAI 109 (265)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 357999999999999987654 456677776655 4333 322211 1122344566777889999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIp 357 (773)
.|.|.|||......||+++|.++++|+. +.|.+.....+........+.+ ...++|+++++.|+||+|+|
T Consensus 110 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~ 189 (265)
T 3kqf_A 110 NGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVP 189 (265)
T ss_dssp CSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEEC
T ss_pred CCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeC
Confidence 9999999998888899999999999885 2343322222222222222222 23689999999999999995
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.. .+..........|...|+..+
T Consensus 190 ~~-------------~l~~~a~~~a~~la~~~p~a~ 212 (265)
T 3kqf_A 190 VH-------------LLEEKAIEIAEKIASNGPIAV 212 (265)
T ss_dssp GG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred HH-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 32 123333344456667777664
No 42
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=98.72 E-value=2e-07 Score=96.58 Aligned_cols=159 Identities=17% Similarity=0.143 Sum_probs=108.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh-----------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL-----------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~-----------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.+....+.++.++. -.+-+|.|.-.++++. |.+..+. .....+.+.+..+..+++|+|+.
T Consensus 26 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 105 (266)
T 3fdu_A 26 KNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIA 105 (266)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHHHHHCCSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 357899999999999987654 4567777777666555 3222111 11224556677888899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.+.|||......||++||.++++|++ +.|.++....+........+.+. ..++|+++++.|+||+|+
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv 185 (266)
T 3fdu_A 106 VKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIV 185 (266)
T ss_dssp ECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHHHHHHTTSCSEEC
T ss_pred ECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCHHHHH
Confidence 99999999999888999999999999885 33444333333222222223332 368999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
| + +..........|...|+..+
T Consensus 186 ~--------~-------l~~~a~~~a~~la~~~~~a~ 207 (266)
T 3fdu_A 186 E--------D-------AYATAQATAQHLTALPLASL 207 (266)
T ss_dssp S--------C-------HHHHHHHHHHHHHTSCHHHH
T ss_pred H--------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 5 1 23334444566777777664
No 43
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=98.71 E-value=1e-07 Score=99.14 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=110.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh-----------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL-----------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~-----------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.+....++++.++. ..+-+|.|.-.++++.. .+.... .....+.+.+..+..+++|+|+.
T Consensus 34 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 113 (272)
T 3qk8_A 34 LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSA 113 (272)
T ss_dssp HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 356889999999999987654 46778888777666653 221111 11223445677888999999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||.-....||++||.++++|+. +.|.++....+........+.+. ..++|+++++.|+||+|+
T Consensus 114 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv 193 (272)
T 3qk8_A 114 IRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCV 193 (272)
T ss_dssp ECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEE
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEee
Confidence 99999999998888899999999999886 33333333322222222223332 368999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|.. .+..........|...|+..+
T Consensus 194 ~~~-------------~l~~~a~~~a~~la~~~~~a~ 217 (272)
T 3qk8_A 194 DDD-------------EVLPTATRLAENLAQGAQNAI 217 (272)
T ss_dssp CGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred CHh-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 532 233444455567777777664
No 44
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=98.71 E-value=1e-07 Score=98.17 Aligned_cols=161 Identities=12% Similarity=0.117 Sum_probs=108.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh---chHHHHHHHHHHHhCCCCcEEEEEcCCCccc
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL---GQGEAIAHNLRTMFGLKVPIISIVIGEGGSG 294 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~---Gqa~aIAr~L~ams~l~VP~ISVViGeg~GG 294 (773)
..+++++.++.....++.++. -.+-+|.|.-.++++.. .+..+. .....+...+..+..+++|+|+.|.|.+.||
T Consensus 27 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 106 (255)
T 3p5m_A 27 LNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAVGF 106 (255)
T ss_dssp TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcchHHHHHHHHHHHHHHhCCCCEEEEeCCeehhh
Confidence 356899999999999987654 45778888776665553 221111 2233455667778889999999999999999
Q ss_pred hhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCCCCCC
Q 004120 295 GALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPLGGAH 364 (773)
Q Consensus 295 GAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~lGgAh 364 (773)
|......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 107 G~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~----- 181 (255)
T 3p5m_A 107 GCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSAD----- 181 (255)
T ss_dssp HHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEECCTT-----
T ss_pred HHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHH-----
Confidence 999888999999999999886 33443333332222222223222 368999999999999999643
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 365 ADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 365 ~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+ +..........|...|+..+
T Consensus 182 -~-------l~~~a~~~a~~la~~~~~a~ 202 (255)
T 3p5m_A 182 -E-------YESVLTDVLRSVSGGPTLAF 202 (255)
T ss_dssp -C-------HHHHHHHHHHHHHTSCHHHH
T ss_pred -H-------HHHHHHHHHHHHHhCCHHHH
Confidence 2 22333334455666666654
No 45
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=98.71 E-value=3.7e-07 Score=95.24 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=97.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh-----------chHHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL-----------GQGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~-----------Gqa~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.+....++++.++. -.+-+|.|.-.++++. |.+..+. .....+...+..+..+++|+|+.
T Consensus 49 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 128 (276)
T 3rrv_A 49 LNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAA 128 (276)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 457999999999999987665 4677888877766555 3222111 11223445667788899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+
T Consensus 129 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLv~~vv 208 (276)
T 3rrv_A 129 VNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVA 208 (276)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEE
T ss_pred ECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCHHHHH
Confidence 99999999999888999999999999885 33433333333322222333332 368999999999999999
No 46
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=98.70 E-value=2.3e-07 Score=96.97 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=97.0
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh---------chHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL---------GQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~---------Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
.+++++.+....+.++.++. ..+-+|.|.-.+++++ |.+..+. .....+...+..+..+++|+|+.|.|
T Consensus 45 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 124 (277)
T 4di1_A 45 NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTG 124 (277)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 67999999999999976654 4577888877766655 3222211 12234455677788899999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
.|+|||+.....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|.
T Consensus 125 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~ 203 (277)
T 4di1_A 125 YALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAP 203 (277)
T ss_dssp EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred eEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCh
Confidence 99999998888899999999999885 33433322222222222223232 36899999999999999953
No 47
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.70 E-value=1.8e-07 Score=96.37 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=108.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhhcCCcEEEEec-CC------CCCCCHhHH----HhchHHHHHHHHHHHhCCCCcEEEEEc
Q 004120 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFID-TP------GAYADLKSE----ELGQGEAIAHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf~LPIVtLID-Tp------GA~~g~~AE----e~Gqa~aIAr~L~ams~l~VP~ISVVi 288 (773)
..+++++.+....+.++.++...+-+|.|.- .+ |+.+..-.. .......+.+.+..+..+++|+|+.|.
T Consensus 25 ~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 104 (261)
T 1ef8_A 25 LNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVE 104 (261)
T ss_dssp TTCCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCceEEEEECCCCCCeeecCcChHhhhccCchhHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3578999999999999877654466676665 44 333321100 001111244566777889999999999
Q ss_pred CCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecC
Q 004120 289 GEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 289 Geg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
|.+.|||......||+++|.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 105 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~- 183 (261)
T 1ef8_A 105 GSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVE- 183 (261)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEEC-
T ss_pred CEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCcccccC-
Confidence 999999998888899999999999886 44544444433332222233332 3789999999999999993
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 359 PLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 359 ~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+++ +..........|...|+..+
T Consensus 184 --------~~~----l~~~a~~~a~~la~~~~~a~ 206 (261)
T 1ef8_A 184 --------VEE----LEDFTLQMAHHISEKAPLAI 206 (261)
T ss_dssp --------HHH----HHHHHHHHHHHHTTSCHHHH
T ss_pred --------HHH----HHHHHHHHHHHHHhCCHHHH
Confidence 332 33444445577888888765
No 48
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=98.69 E-value=2.2e-07 Score=96.76 Aligned_cols=161 Identities=12% Similarity=0.094 Sum_probs=107.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh-------------chHHHHHHHHHHHhCCCCcEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL-------------GQGEAIAHNLRTMFGLKVPII 284 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~-------------Gqa~aIAr~L~ams~l~VP~I 284 (773)
..+++++.++...+.++.++. ..+-+|.|.-.++++. |.+..+. .....+...+..+..+++|+|
T Consensus 38 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 117 (279)
T 3g64_A 38 LNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVI 117 (279)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 356899999999999986654 5677888876665554 2211110 112234556677888999999
Q ss_pred EEEcCCCccchhhhccccceeeeecCCeeee------eC-HHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCce
Q 004120 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------AS-PEACAAILWKSAKASPKAAEK----LKITGSELCKLQIAD 353 (773)
Q Consensus 285 SVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------is-PEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD 353 (773)
+.|.|.|.|||......||++||.++++|+. +. |.+.....+........+.+. ..++|+++++.|+||
T Consensus 118 Aav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~ 197 (279)
T 3g64_A 118 AALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAPEAERIGLIS 197 (279)
T ss_dssp EEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCS
T ss_pred EEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCC
Confidence 9999999999999888899999999999874 22 554333333222222223332 368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|+|.. + +..........|...|+..+
T Consensus 198 ~vv~~~------~-------l~~~a~~~a~~la~~~~~a~ 224 (279)
T 3g64_A 198 ELTEEG------R-------ADEAARTLARRLADGPALAH 224 (279)
T ss_dssp EECCTT------C-------HHHHHHHHHHHHHTSCHHHH
T ss_pred EecCch------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 999642 2 22333344455666676654
No 49
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=98.69 E-value=1.1e-07 Score=97.75 Aligned_cols=162 Identities=16% Similarity=0.169 Sum_probs=108.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh----------chHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL----------GQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~----------Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.+....+.++.++. ..+-+|.|.-.++++. |.+..+. .....+.+.+..+..+++|+|+.|
T Consensus 27 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 106 (256)
T 3qmj_A 27 LNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAV 106 (256)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 357999999999999987654 4577787776665443 3222111 112245566778888999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHH-HHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPE-ACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPE-gaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
.|.+.|||+.....||+++|.++++|+. +.|. |....+.+ ......+.+. ..++|+++++.|+||+|+
T Consensus 107 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r-~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv 185 (256)
T 3qmj_A 107 NGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQ-LVGRQNAAWLLMSSEWIDAEEALRMGLVWRIC 185 (256)
T ss_dssp CSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHH-HHHHHHHHHHHHSCCCEEHHHHHHHTSSSEEE
T ss_pred CCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHH-HhCHHHHHHHHHcCCCCCHHHHHHCCCccEEe
Confidence 9999999999888999999999999875 2333 33332322 1111222232 368999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~ 395 (773)
|.. .+..........|...|+..+..
T Consensus 186 ~~~-------------~l~~~a~~~a~~la~~~~~a~~~ 211 (256)
T 3qmj_A 186 SPE-------------ELLPEARRHAEILAAKPISSLMA 211 (256)
T ss_dssp CGG-------------GHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CHh-------------HHHHHHHHHHHHHHhCCHHHHHH
Confidence 532 23334444556777788776533
No 50
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=98.69 E-value=5.2e-07 Score=94.64 Aligned_cols=160 Identities=10% Similarity=0.085 Sum_probs=107.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-----CCCCCHhH-----H-HhchHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-----GAYADLKS-----E-ELGQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-----GA~~g~~A-----E-e~Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.++...+.++.++. ..+-+|.|.-.+ |+.+..-. + .......+...+..+..+++|+|+.|
T Consensus 54 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 133 (287)
T 2vx2_A 54 RNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMV 133 (287)
T ss_dssp TTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 357999999999999987654 456677776543 44443210 0 01112234456677889999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.|.|||......||++||.++++|+. +.|.+.... +........+.+. ..++|+++++.|+||+|+|
T Consensus 134 ~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~ 212 (287)
T 2vx2_A 134 NGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVP 212 (287)
T ss_dssp CSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEEC
T ss_pred CCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHHHHhCCCCCHHHHHHCCCcceecC
Confidence 9999999998888899999999999886 445554444 3332222333332 3689999999999999995
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.. .+..........|...++..+
T Consensus 213 ~~-------------~l~~~a~~~a~~la~~~p~a~ 235 (287)
T 2vx2_A 213 EA-------------ELQEETMRIARKIASLSRPVV 235 (287)
T ss_dssp GG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred HH-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 32 233334444566777787664
No 51
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=98.69 E-value=2.2e-07 Score=96.08 Aligned_cols=158 Identities=16% Similarity=0.225 Sum_probs=107.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh--------------chHHHHHHHHHHHhCCCCcE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL--------------GQGEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~--------------Gqa~aIAr~L~ams~l~VP~ 283 (773)
..+++++.++...+.++.++. -.+-+|.|.-.++++. |.+..+. .....+.+.+..+..+++|+
T Consensus 32 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 111 (267)
T 3oc7_A 32 RNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPV 111 (267)
T ss_dssp TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHHHhCCCCE
Confidence 357999999999999987654 4567777765544332 2111110 12334556677788899999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD 353 (773)
|+.|.|.|.|||......||++||.++++|+. +.|.+....... ......+.+. ..++|+++++.|+||
T Consensus 112 IAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg~~~~a~eA~~~GLv~ 190 (267)
T 3oc7_A 112 IAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTGEKFDARRAEEIGLIT 190 (267)
T ss_dssp EEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHCCCBCHHHHHHHTSSS
T ss_pred EEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcCCccCHHHHHHCCChh
Confidence 99999999999999888999999999999885 345544444443 3333333333 368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+| ++ + +..........|...|+..+
T Consensus 191 ~v-~~-------~-------l~~~a~~~a~~la~~~~~a~ 215 (267)
T 3oc7_A 191 MA-AE-------D-------LDAAIDQLVTDVGRGSPQGL 215 (267)
T ss_dssp EE-CS-------S-------HHHHHHHHHHHHHTSCHHHH
T ss_pred hh-hH-------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 99 43 2 33334444566667777664
No 52
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=98.68 E-value=4.8e-07 Score=93.50 Aligned_cols=161 Identities=9% Similarity=0.006 Sum_probs=108.6
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-----CCCCHh-----------HHHhchHHHHHHHHHHHhCCCCcE
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-----AYADLK-----------SEELGQGEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-----A~~g~~-----------AEe~Gqa~aIAr~L~ams~l~VP~ 283 (773)
.+++++.++...+.++.++. -.+-+|.|.-.++ +.+..- .........+...+..+..+++|+
T Consensus 28 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 107 (263)
T 3l3s_A 28 HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPT 107 (263)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 67999999999999987765 4566777755443 322210 011112334556677888999999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD 353 (773)
|+.|.|.+.|||......||+++|.++++|+. +.|-+....+.+ ......+.+. ..++|+++++.|+||
T Consensus 108 IAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~g~~~~l~r-~vG~~~A~~l~ltg~~~~A~eA~~~GLv~ 186 (263)
T 3l3s_A 108 IALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTTPAVAVSR-VIGRRAVTEMALTGATYDADWALAAGLIN 186 (263)
T ss_dssp EEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCCHHHHHHHHT-TSCHHHHHHHHHHCCEEEHHHHHHHTSSS
T ss_pred EEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCCCccHHHHHHH-HcCHHHHHHHHHcCCCCCHHHHHHCCCcc
Confidence 99999999999999888899999999999874 225444433332 2222233332 368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~ 395 (773)
+|+| ++ .+..........|...|+..+..
T Consensus 187 ~vv~---------~~----~l~~~a~~~a~~la~~~~~a~~~ 215 (263)
T 3l3s_A 187 RILP---------EA----ALATHVADLAGALAARNQAPLRR 215 (263)
T ss_dssp EECC---------HH----HHHHHHHHHHHHHHSSCHHHHHH
T ss_pred EEeC---------HH----HHHHHHHHHHHHHHhCCHHHHHH
Confidence 9994 33 23444445556777777776533
No 53
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=98.68 E-value=1.4e-07 Score=98.48 Aligned_cols=160 Identities=10% Similarity=-0.007 Sum_probs=109.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.++...+.++.++ -.+-+|.|.-.++++. |.+..+ ......+.+.+..+..+++|+|+.|.|
T Consensus 37 ~Nal~~~~~~~L~~al~~~d-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 115 (275)
T 3hin_A 37 RNALNDGLMAALKDCLTDIP-DQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKG 115 (275)
T ss_dssp TTCBCHHHHHHHHHHTSSCC-TTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHhC-cCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 35799999999998887774 4777888877665554 222111 112234556677888999999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
.|.|||.-....||++||.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 116 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~ 195 (275)
T 3hin_A 116 AVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENG 195 (275)
T ss_dssp EEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESSS
T ss_pred eeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCCEEeChh
Confidence 99999999888899999999999886 33443333322222222223332 368999999999999999643
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+ +..........|...++..+
T Consensus 196 ------~-------l~~~a~~~a~~ia~~~p~a~ 216 (275)
T 3hin_A 196 ------S-------AYDKALELGNRVAQNAPLTN 216 (275)
T ss_dssp ------C-------HHHHHHHHHHHHTTSCHHHH
T ss_pred ------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 2 23333444567777787764
No 54
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=98.68 E-value=5.3e-08 Score=98.69 Aligned_cols=135 Identities=21% Similarity=0.281 Sum_probs=94.5
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 214 ENIQRNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 214 e~~~~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++-+..|.+++..+....+.+..++. ..-+|+..|||||-.+.. +.+|...+ ..++.|++++|.|.|
T Consensus 45 ~rii~l~g~I~~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~a-------g~~I~~~i---~~~~~pV~t~v~G~A 114 (218)
T 1y7o_A 45 DRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSA-------GLAIVDTM---NFIKADVQTIVMGMA 114 (218)
T ss_dssp TTEEEEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHH-------HHHHHHHH---HHSSSCEEEEEEEEE
T ss_pred CCEEEEeCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHH-------HHHHHHHH---HhcCCCEEEEEccEe
Confidence 344455688899999988888876654 357999999999954321 22344444 446789999999999
Q ss_pred ccchhhhccccce--eeeecCCeeeeeCHHHHH------------------------HHhhhhccCc-hHHHHH----hc
Q 004120 292 GSGGALAIGCANK--LLMLENAVFYVASPEACA------------------------AILWKSAKAS-PKAAEK----LK 340 (773)
Q Consensus 292 ~GGGAlA~g~aD~--Vlm~e~A~~sVisPEgaA------------------------sIl~rd~~~a-~eaAe~----lk 340 (773)
.|||++.++.||. ++|.|++.+++..|-+.. .++-+..-.. ..+.+. .-
T Consensus 115 aS~G~~Ia~a~d~g~r~a~p~a~igih~p~~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~ 194 (218)
T 1y7o_A 115 ASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNW 194 (218)
T ss_dssp ETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred HHHHHHHHHcCCcCcEEEcCCcEEEEecccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCCE
Confidence 9999999999999 999999999886664322 1111111111 122222 34
Q ss_pred ccHHHHHHcCCceeeecC
Q 004120 341 ITGSELCKLQIADGVIPE 358 (773)
Q Consensus 341 itA~dL~~lGiVD~IIpE 358 (773)
+|++++++.|+||+|++.
T Consensus 195 ~ta~EA~e~GLVD~v~~~ 212 (218)
T 1y7o_A 195 MSAQETLEYGFIDEIMAN 212 (218)
T ss_dssp BCHHHHHHHTSCSEECCC
T ss_pred EcHHHHHHCCCCcEEcCc
Confidence 799999999999999954
No 55
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=98.68 E-value=1.6e-07 Score=96.56 Aligned_cols=161 Identities=19% Similarity=0.194 Sum_probs=104.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh----c---hHH-HHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL----G---QGE-AIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~----G---qa~-aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.+....+.++.++. ..+-+|.|.-.++++. |.+..+. . ... .+.+.+..+..+++|+|+.|.|
T Consensus 24 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 103 (257)
T 2ej5_A 24 LNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNG 103 (257)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECS
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECc
Confidence 357899999999999877654 4566777766544333 2211110 0 011 1345566788899999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIpE~ 359 (773)
.|.|||+.....||+++|.++++|++ +.|.+.....+........+.+ ...++++++++.|+||+|+|..
T Consensus 104 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 183 (257)
T 2ej5_A 104 AAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPLS 183 (257)
T ss_dssp EEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEEECGG
T ss_pred cccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCcceecChh
Confidence 99999999888899999999999886 3444433332222222222222 2468999999999999999532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.+..........|...|+..+
T Consensus 184 -------------~l~~~a~~~a~~la~~~~~a~ 204 (257)
T 2ej5_A 184 -------------DWEEEVKQFAERLSAMPTKAI 204 (257)
T ss_dssp -------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred -------------HHHHHHHHHHHHHHhCCHHHH
Confidence 122333334456667776654
No 56
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=98.68 E-value=3.3e-07 Score=94.51 Aligned_cols=159 Identities=14% Similarity=0.164 Sum_probs=104.4
Q ss_pred CCCCHHHHHHHHHHHHHhhhc-CCcEEEEecC-CCCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEEc
Q 004120 221 GMPTPHGYRKALRMMYYADHH-GFPIVTFIDT-PGAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf-~LPIVtLIDT-pGA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVVi 288 (773)
.+++++.+....+.++.++.. .+-+|.|.-. ++++. |.+..+ ......+...+..+..+++|+|+.|.
T Consensus 26 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 105 (260)
T 1sg4_A 26 NSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAIN 105 (260)
T ss_dssp TEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 568899999999999876553 4667777665 33333 221111 11122345566778889999999999
Q ss_pred CCCccchhhhccccceeeee--cCCeeee------eCHH-HHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceee
Q 004120 289 GEGGSGGALAIGCANKLLML--ENAVFYV------ASPE-ACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGV 355 (773)
Q Consensus 289 Geg~GGGAlA~g~aD~Vlm~--e~A~~sV------isPE-gaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~I 355 (773)
|.|.|||+.....||+++|. ++++|+. +.|. |....+.+ ......+.+ ...++++++++.|+||+|
T Consensus 106 G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~-~vG~~~a~~llltg~~~~a~eA~~~GLv~~v 184 (260)
T 1sg4_A 106 GACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLEN-TIGHRAAERALQLGLLFPPAEALQVGIVDQV 184 (260)
T ss_dssp EEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHH-HHCHHHHHHHHHHTCCBCHHHHHHHTSSSEE
T ss_pred CeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHH-HhCHHHHHHHHHcCCcCCHHHHHHcCCCCEe
Confidence 99999999988899999999 8898874 3343 33333322 222222222 246899999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 356 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 356 IpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|.. .+..........|...|+..+
T Consensus 185 v~~~-------------~l~~~a~~~a~~la~~~~~a~ 209 (260)
T 1sg4_A 185 VPEE-------------QVQSTALSAIAQWMAIPDHAR 209 (260)
T ss_dssp ECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred cCHH-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 9432 223333344456667777654
No 57
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.67 E-value=4.1e-07 Score=94.74 Aligned_cols=161 Identities=11% Similarity=0.098 Sum_probs=108.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHH-----h----c----hHHHHHHHHHHHhCCCCcEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEE-----L----G----QGEAIAHNLRTMFGLKVPII 284 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe-----~----G----qa~aIAr~L~ams~l~VP~I 284 (773)
..+++++.++.....++.++. -.+-+|.|.-.+.+++ |.+..+ . . ........+..+..+++|+|
T Consensus 36 ~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI 115 (274)
T 4fzw_C 36 LNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVI 115 (274)
T ss_dssp TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 356999999999999987665 4577887776655544 211100 0 0 11123345667778999999
Q ss_pred EEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCcee
Q 004120 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADG 354 (773)
Q Consensus 285 SVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~ 354 (773)
+.|.|.++|||.-....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+
T Consensus 116 Aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~ 195 (274)
T 4fzw_C 116 CAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQ 195 (274)
T ss_dssp EEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHHHHHHCCCEEHHHHHHTTSSSE
T ss_pred EEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCceE
Confidence 9999999999999888999999999999885 34544444433333222333332 3689999999999999
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 355 VIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 355 IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+|.. .+..........|...|+..+
T Consensus 196 vv~~~-------------~l~~~a~~~a~~la~~~~~a~ 221 (274)
T 4fzw_C 196 VVDDE-------------TLADTAQQLARHLATQPTFGL 221 (274)
T ss_dssp EECGG-------------GHHHHHHHHHHHHTTSCHHHH
T ss_pred EeChH-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 99532 233344445567777887764
No 58
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=98.67 E-value=6.5e-07 Score=93.89 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=96.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh----------chHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL----------GQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~----------Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.+....++++.++. -.+-+|.|.-.++++. |.+..+. .....+...+..+..+++|+|+.|
T Consensus 47 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 126 (286)
T 3myb_A 47 FNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARV 126 (286)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 356899999999999987654 4577787776666554 3222111 112344566677888999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.|.|||......||++||.++++|+. +.|-+....+.+ ......+.+. ..++|+++++.|+||+|+|
T Consensus 127 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~~g~~~~L~r-~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~ 205 (286)
T 3myb_A 127 HGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVALSR-NVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVA 205 (286)
T ss_dssp CSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCHHHHHHHTT-TSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEEC
T ss_pred CCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCCCchHHHHHHH-HcCHHHHHHHHHcCCCCCHHHHHHCCCCcEecC
Confidence 9999999999888899999999999874 224443333322 2222233332 3689999999999999995
No 59
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.67 E-value=4.3e-07 Score=92.26 Aligned_cols=159 Identities=13% Similarity=0.069 Sum_probs=108.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCC-CHhHHH--------hchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 221 GMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEE--------LGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~-g~~AEe--------~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
.+++++.++...+.++.++.. .-+|.|.-.++++. |.+..+ ......+...+..+..+++|+|+.|.|.+
T Consensus 27 Nal~~~~~~~L~~al~~~~~d-~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 105 (232)
T 3ot6_A 27 NAISPDVIIAFNAALDQAEKD-RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHA 105 (232)
T ss_dssp TCBCHHHHHHHHHHHHHHHHT-TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSCEEEECCEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcC-CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEe
Confidence 568999999999999877653 34666665554443 322111 11223445667788899999999999999
Q ss_pred ccchhhhccccceeeeecC-Ceeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 292 GSGGALAIGCANKLLMLEN-AVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 292 ~GGGAlA~g~aD~Vlm~e~-A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
.|||.-....||+++|.++ ++|+. .+|.+....+.+. .....+.+. ..++|+++++.|+||+|+|..
T Consensus 106 ~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~-ig~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~ 184 (232)
T 3ot6_A 106 VAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDR-LRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVE 184 (232)
T ss_dssp ETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHH-SCHHHHHHHHTSCCEECHHHHHHHTSCSEEECTT
T ss_pred ehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHH-hCHHHHHHHHHcCCccCHHHHHHCCCCCEecCHH
Confidence 9999998889999999998 78774 4566665544332 222233333 268999999999999999642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
.+..........|...|+..+.
T Consensus 185 -------------~l~~~a~~~a~~la~~~~~a~~ 206 (232)
T 3ot6_A 185 -------------ELQGAALAVAAQLKKINMNAHK 206 (232)
T ss_dssp -------------THHHHHHHHHHHHTTSCHHHHH
T ss_pred -------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 2334444555667777776643
No 60
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=98.66 E-value=2.6e-07 Score=95.60 Aligned_cols=161 Identities=12% Similarity=0.112 Sum_probs=104.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh--------------chHHHHHHHHHHHhCCCCcE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL--------------GQGEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~--------------Gqa~aIAr~L~ams~l~VP~ 283 (773)
..+++++.+....+.++.++. ..+-+|.|.-.+++++ |.+..+. .....+.+.+..+..+++|+
T Consensus 24 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 103 (269)
T 1nzy_A 24 RNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPV 103 (269)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 356899999999999987765 4567777776554443 2211110 11122445566778899999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD 353 (773)
|+.|.|.|.|||......||+++|.++++|+. +.|.+.....+........+.+ ...++|+++++.|+||
T Consensus 104 IAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~ 183 (269)
T 1nzy_A 104 LAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVS 183 (269)
T ss_dssp EEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCS
T ss_pred EEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCcc
Confidence 99999999999998888899999999999886 3344333322221111122222 2468999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|+| +++ +..........|...|+..+
T Consensus 184 ~vv~---------~~~----l~~~a~~~a~~la~~~p~a~ 210 (269)
T 1nzy_A 184 RVYP---------KDE----FREVAWKVARELAAAPTHLQ 210 (269)
T ss_dssp CEEC---------HHH----HHHHHHHHHHHHHHSCHHHH
T ss_pred EeeC---------HHH----HHHHHHHHHHHHHcCCHHHH
Confidence 9993 332 22233333455666666553
No 61
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=98.65 E-value=2.7e-07 Score=95.34 Aligned_cols=161 Identities=16% Similarity=0.117 Sum_probs=105.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHH--hc----hHHHHHH-HHHHH-h--CCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEE--LG----QGEAIAH-NLRTM-F--GLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe--~G----qa~aIAr-~L~am-s--~l~VP~ISVV 287 (773)
..+++++.++...+.++.++. ..+-+|.|.-.++++. |.+... .. ....... .+..+ . .+++|+|+.|
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav 109 (265)
T 3rsi_A 30 RNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAV 109 (265)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC--------------CCCHHHHHHHTTSSCCCSSCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHhcCCCCCEEEEE
Confidence 356899999999999987654 4577777776665544 222110 00 0001123 56667 7 8999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.+.|||+.....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 110 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~ 189 (265)
T 3rsi_A 110 NGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVP 189 (265)
T ss_dssp CSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEES
T ss_pred CCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecC
Confidence 9999999999888999999999999885 44544333333322222223232 3689999999999999996
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.. + +..........|...|+..+
T Consensus 190 ~~------~-------l~~~a~~~a~~la~~~~~a~ 212 (265)
T 3rsi_A 190 AG------T-------ALDKARSLADRIVRNGPLAV 212 (265)
T ss_dssp TT------C-------HHHHHHHHHHHHHTSCHHHH
T ss_pred hh------H-------HHHHHHHHHHHHHhCCHHHH
Confidence 43 2 23333344556667777664
No 62
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=98.65 E-value=1.6e-07 Score=96.94 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=109.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh---ch----HHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL---GQ----GEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~---Gq----a~aIAr~L~ams~l~VP~ISVViGe 290 (773)
..+++++.++.....++.++. ..+-+|.|.-.++++. |.+..+. .. .....+.+..+..+++|+|+.|.|.
T Consensus 26 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 105 (258)
T 4fzw_A 26 RNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGY 105 (258)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECSE
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcCc
Confidence 356999999999999876654 5677888877665554 3221111 11 1123456677888999999999999
Q ss_pred CccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPL 360 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~l 360 (773)
++|||.-....||++||.++++|+. +.|.++.+..+........+.+. ..++|+++++.|+||+|+|..
T Consensus 106 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~- 184 (258)
T 4fzw_A 106 ALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSD- 184 (258)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT-
T ss_pred ceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHcCCcCcHHHHHHCCCeeEEeCch-
Confidence 9999999888999999999999885 33443333333222222333333 378999999999999999643
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 361 GGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 361 GgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
+ +..........|...|+..+.
T Consensus 185 -----~-------l~~~a~~~a~~la~~~p~a~~ 206 (258)
T 4fzw_A 185 -----L-------TLEYALQLASKMARHSPLALQ 206 (258)
T ss_dssp -----T-------HHHHHHHHHHHHTTSCHHHHH
T ss_pred -----H-------HHHHHHHHHHHHHhCCHHHHH
Confidence 2 333344445667777877653
No 63
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=98.65 E-value=3.7e-07 Score=95.80 Aligned_cols=160 Identities=11% Similarity=0.129 Sum_probs=106.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHH----------------hchHHHHHHHHHHHhCCCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEE----------------LGQGEAIAHNLRTMFGLKV 281 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe----------------~Gqa~aIAr~L~ams~l~V 281 (773)
..+++++.+.....+++.++. -.+-+|.|.-.++++. |.+..+ ......+...+..+..+++
T Consensus 45 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 124 (290)
T 3sll_A 45 MNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQ 124 (290)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHHHHHhCCC
Confidence 356899999999999987664 4577787777665554 322211 1123345566777888999
Q ss_pred cEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHH--HHHHHhhhhccCchHHHHH----hcccHHHHHHc
Q 004120 282 PIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPE--ACAAILWKSAKASPKAAEK----LKITGSELCKL 349 (773)
Q Consensus 282 P~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPE--gaAsIl~rd~~~a~eaAe~----lkitA~dL~~l 349 (773)
|+|+.|.|.|+|||+.....||++||.++++|+. +.|. |....+.+ ......+.+. ..++|+++++.
T Consensus 125 PvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r-~vG~~~A~~llltG~~i~A~eA~~~ 203 (290)
T 3sll_A 125 PVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPR-AIGTSRASDIMLTGRDVDADEAERI 203 (290)
T ss_dssp CEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHH-HHCHHHHHHHHHHCCCEEHHHHHHH
T ss_pred CEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHH-HhCHHHHHHHHHcCCCCCHHHHHHC
Confidence 9999999999999998888899999999999875 3343 33333332 2222222222 36899999999
Q ss_pred CCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 350 QIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 350 GiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+||+|+|.. + +..........|...|+..+
T Consensus 204 GLV~~vv~~~---------~----l~~~a~~~a~~la~~~~~a~ 234 (290)
T 3sll_A 204 GLVSRKVASE---------S----LLEECYAIGERIAGFSRPGI 234 (290)
T ss_dssp TSSSEEECGG---------G----HHHHHHHHHHHHHHSCHHHH
T ss_pred CCccEEeChh---------H----HHHHHHHHHHHHHcCCHHHH
Confidence 9999999532 1 23333344455666666664
No 64
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=98.63 E-value=2.5e-07 Score=95.24 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=103.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh---c-----hHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL---G-----QGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~---G-----qa~aIAr~L~ams~l~VP~ISVViG 289 (773)
..+++++.+....+.++.++. ..+-+|.|.-.++++. |.+.... . ....+ +.+..+..+++|+|+.|.|
T Consensus 26 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~-~~~~~l~~~~kPvIAav~G 104 (258)
T 2pbp_A 26 LNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQF-ADWDRLSIVKTPMIAAVNG 104 (258)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTT-HHHHHHHTCCSCEEEEECS
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHH-HHHHHHHhCCCCEEEEEcC
Confidence 357899999999999987654 4566777766544333 2221111 0 00112 4566788899999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeecCC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIpE~ 359 (773)
.+.|||......||+++|.++++|+. +.|.++....+........+.+ ...++|+++++.|+||+|+|..
T Consensus 105 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 184 (258)
T 2pbp_A 105 LALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSPE 184 (258)
T ss_dssp EEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred EEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceeeChH
Confidence 99999999888999999999999886 3343333322222212222222 2368999999999999999531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+ +..........|...|+..+
T Consensus 185 ---------~----l~~~a~~~a~~la~~~~~a~ 205 (258)
T 2pbp_A 185 ---------L----LMEETMRLAGRLAEQPPLAL 205 (258)
T ss_dssp ---------G----HHHHHHHHHHHHHTSCHHHH
T ss_pred ---------H----HHHHHHHHHHHHHhCCHHHH
Confidence 1 22233344456666776554
No 65
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=98.62 E-value=4.2e-07 Score=94.50 Aligned_cols=157 Identities=9% Similarity=0.046 Sum_probs=106.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCC-Hh----HHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccc
Q 004120 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYAD-LK----SEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSG 294 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~g-~~----AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GG 294 (773)
..+++++.++...++++.++...+-+|.|.-.+++++. .+ .........+...+..+..+++|+|+.|.|.+.||
T Consensus 42 ~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 121 (264)
T 3he2_A 42 RNALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDASPMPVVGAINGPAIGA 121 (264)
T ss_dssp TTCBCHHHHHHHHHHHHCC---CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCceEEEEECCCCCccCCcCCccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCcEEcc
Confidence 35799999999999998665447778888766554442 11 11122344556677788889999999999999999
Q ss_pred hhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCCCCCC
Q 004120 295 GALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPLGGAH 364 (773)
Q Consensus 295 GAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~lGgAh 364 (773)
|......||++||.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|++
T Consensus 122 G~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~v~~------- 194 (264)
T 3he2_A 122 GLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT------- 194 (264)
T ss_dssp HHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC-------
T ss_pred hhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCccHHHHHHCCCeEEEec-------
Confidence 998888899999999999885 33333333222222222223232 3789999999999999972
Q ss_pred CChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 365 ADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 365 ~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.+ ........|...|+..+
T Consensus 195 --~~--------~a~~~A~~la~~~p~a~ 213 (264)
T 3he2_A 195 --LA--------DAQAWAAEIARLAPLAI 213 (264)
T ss_dssp --HH--------HHHHHHHHHHTSCHHHH
T ss_pred --HH--------HHHHHHHHHHcCCHHHH
Confidence 11 12334466778888775
No 66
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=98.61 E-value=4.2e-07 Score=93.89 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=105.4
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEec-CCCCCC-CHhHHHh--------chHHHH-HHHHHHHhCCCCcEEEEEc
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFID-TPGAYA-DLKSEEL--------GQGEAI-AHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLID-TpGA~~-g~~AEe~--------Gqa~aI-Ar~L~ams~l~VP~ISVVi 288 (773)
.+++++.+....+.++.++. ..+-+|.|.- .++++. |.+..+. .....+ .+.+..+..+++|+|+.|.
T Consensus 30 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 109 (265)
T 2ppy_A 30 NSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLE 109 (265)
T ss_dssp CCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 46889999999999887664 4566777766 554333 2221111 111233 4556778889999999999
Q ss_pred CCCccchhhhccccceeeeecCC-eeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeec
Q 004120 289 GEGGSGGALAIGCANKLLMLENA-VFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIP 357 (773)
Q Consensus 289 Geg~GGGAlA~g~aD~Vlm~e~A-~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIp 357 (773)
|.+.|||+.....||+++|.+++ +|++ +.|.+.....+........+.+ ...++|+++++.|+||+|+|
T Consensus 110 G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~ 189 (265)
T 2ppy_A 110 GHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETITPQEALEIGLVNRVFP 189 (265)
T ss_dssp SEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSEEEC
T ss_pred CEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCcceecC
Confidence 99999999988899999999999 8876 4454433332222222222222 23689999999999999995
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.. .+..........|...++..+
T Consensus 190 ~~-------------~l~~~a~~~a~~la~~~~~a~ 212 (265)
T 2ppy_A 190 QA-------------ETRERTREYARKLANSATYAV 212 (265)
T ss_dssp GG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred HH-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 32 223333344456777777654
No 67
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.61 E-value=4.5e-07 Score=93.68 Aligned_cols=161 Identities=14% Similarity=0.106 Sum_probs=104.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHH--H--h-c------hHHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSE--E--L-G------QGEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AE--e--~-G------qa~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.+....+.++.++. ..+=+|.|.-.+++++ |.+.. . . . ....+.+.+..+..+++|+|+.
T Consensus 31 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (264)
T 1wz8_A 31 LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAA 110 (264)
T ss_dssp GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccccccccccchHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356899999999999987654 4566777766544443 22211 0 0 1 1122345566778899999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||......||+++|.++++|+. +.|.+.....+........+.+ ...++|+++++.|+||+|+
T Consensus 111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv 190 (264)
T 1wz8_A 111 VEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAV 190 (264)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEEE
T ss_pred ECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCceeec
Confidence 99999999998888899999999999886 3343333222222112122222 2468999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 357 pE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|.. .+..........|...|+..+
T Consensus 191 ~~~-------------~l~~~a~~~a~~la~~~~~a~ 214 (264)
T 1wz8_A 191 EDE-------------KVYEKALEVAERLAQGPKEAL 214 (264)
T ss_dssp CGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred Chh-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 532 123333344456667776654
No 68
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=98.60 E-value=1.1e-07 Score=98.18 Aligned_cols=138 Identities=15% Similarity=0.139 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhh
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGAL 297 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAl 297 (773)
..+++++.+....+.++.++. -.+-+|.|.-.++++. |.+..+.............+..+++|+|+.|.|.|.|||..
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~ 109 (256)
T 3pe8_A 30 RNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTTELPDISPKWPDMTKPVIGAINGAAVTGGLE 109 (256)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC---------CCCCCCCSSCEEEEECSEEETHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEECCeeechHHH
Confidence 357899999999999987654 5566777776665554 32222211111122223456678999999999999999999
Q ss_pred hccccceeeeecCCeeee------eCHHH-HHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecC
Q 004120 298 AIGCANKLLMLENAVFYV------ASPEA-CAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 298 A~g~aD~Vlm~e~A~~sV------isPEg-aAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
....||+++|.++++|+. +.|.+ ....+.+ ......+.+. ..++|+++++.|+||+|+|.
T Consensus 110 lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r-~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 180 (256)
T 3pe8_A 110 LALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQ-KVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAH 180 (256)
T ss_dssp HHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHH-HHCHHHHHHHHHHCCCEEHHHHHHHTSCSCEECG
T ss_pred HHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHH-hcCHHHHHHHHHcCCCCCHHHHHHCCCCeEEeCH
Confidence 888899999999999885 23332 3322222 1122222222 36899999999999999953
No 69
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=98.60 E-value=5.1e-07 Score=92.30 Aligned_cols=161 Identities=15% Similarity=0.143 Sum_probs=105.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchHH----HHHHHHHHHhCCCCcEEEEEcCCCcc
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQGE----AIAHNLRTMFGLKVPIISIVIGEGGS 293 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa~----aIAr~L~ams~l~VP~ISVViGeg~G 293 (773)
..+++++.++...+.++.++. ..+-+|.|.-.++++. |.+........ ...+.+..+..+++|+|+.|.|.+.|
T Consensus 24 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 103 (243)
T 2q35_A 24 RNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLILDCEIPIIAAMQGHSFG 103 (243)
T ss_dssp TSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCCCCCCHHHHHTCCSCEEEEECSEEET
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhhHHHHHHHHHHhCCCCEEEEEcCcccc
Confidence 356899999999999987655 4567777776555443 22221110000 01234567788999999999999999
Q ss_pred chhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeecCCCCCC
Q 004120 294 GGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIPEPLGGA 363 (773)
Q Consensus 294 GGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIpE~lGgA 363 (773)
||......||+++|.++++|++ +.|.++....+........+.+ ...++++++++.|+||+|+|
T Consensus 104 gG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~------ 177 (243)
T 2q35_A 104 GGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVS------ 177 (243)
T ss_dssp HHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTCSSCEEC------
T ss_pred chHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEecC------
Confidence 9998888999999999999885 3333333322222112122222 23689999999999999993
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 364 HADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 364 h~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+++ +..........|...|+..+
T Consensus 178 ---~~~----l~~~a~~~a~~la~~~~~a~ 200 (243)
T 2q35_A 178 ---RQD----VLNYAQQLGQKIAKSPRLSL 200 (243)
T ss_dssp ---HHH----HHHHHHHHHHHHTTSCHHHH
T ss_pred ---hhH----HHHHHHHHHHHHHhCCHHHH
Confidence 332 33344445566777777654
No 70
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=98.59 E-value=5.6e-07 Score=93.67 Aligned_cols=161 Identities=13% Similarity=0.153 Sum_probs=103.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh-------ch--HHHHHH----H-HHHHhCCCCcE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL-------GQ--GEAIAH----N-LRTMFGLKVPI 283 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~-------Gq--a~aIAr----~-L~ams~l~VP~ 283 (773)
..+++++.++...+.++.++. -.+-+|.|.-.+++++ |.+..+. .. ...+.+ . +..+..+++|+
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 109 (276)
T 2j5i_A 30 RNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPT 109 (276)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHTTTTTTCSSCE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 356899999999999987765 3455666666555544 3222111 00 111211 1 34567789999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD 353 (773)
|+.|.|.|.|||......||++||.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||
T Consensus 110 IAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~ 189 (276)
T 2j5i_A 110 IAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVN 189 (276)
T ss_dssp EEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSSS
T ss_pred EEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCcc
Confidence 99999999999998888899999999999886 34443333332222222233332 368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|+| ++ .+..........|...|+..+
T Consensus 190 ~vv~---------~~----~l~~~a~~~a~~la~~~p~a~ 216 (276)
T 2j5i_A 190 ESVP---------LA----QLREVTIELARNLLEKNPVVL 216 (276)
T ss_dssp EEEC---------HH----HHHHHHHHHHHHHHTSCHHHH
T ss_pred EeeC---------HH----HHHHHHHHHHHHHHhCCHHHH
Confidence 9994 22 233344444556666776654
No 71
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=98.58 E-value=3.2e-07 Score=95.44 Aligned_cols=139 Identities=15% Similarity=0.192 Sum_probs=91.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchH---HH------HHHHHHHHh---CCCCcEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQG---EA------IAHNLRTMF---GLKVPIIS 285 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa---~a------IAr~L~ams---~l~VP~IS 285 (773)
..+++++.+....+.++.++. -.+-+|.|.-.++++. |.+..+.... .. ....+..+. .+++|+|+
T Consensus 41 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIA 120 (278)
T 4f47_A 41 RNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIA 120 (278)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------CTTCBTTTTBSCCCSSCEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 357999999999999987654 5677888877666554 3222211110 00 111223344 78999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGV 355 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~I 355 (773)
.|.|.|.|||+.....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|
T Consensus 121 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~v 200 (278)
T 4f47_A 121 AVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHV 200 (278)
T ss_dssp EECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred EECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEe
Confidence 999999999999888999999999999875 33443333322222222222222 36899999999999999
Q ss_pred ecC
Q 004120 356 IPE 358 (773)
Q Consensus 356 IpE 358 (773)
+|.
T Consensus 201 v~~ 203 (278)
T 4f47_A 201 VPD 203 (278)
T ss_dssp ECT
T ss_pred eCh
Confidence 964
No 72
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.57 E-value=1.1e-06 Score=90.74 Aligned_cols=158 Identities=12% Similarity=0.064 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 222 MPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 222 ~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
+++++.++...+.++.++. ..+-+|.|.-.++++. |.+..+ ........+.+..+..+++|+|+.|.|.
T Consensus 39 al~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 118 (257)
T 1szo_A 39 VWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGP 118 (257)
T ss_dssp EECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred CCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCc
Confidence 5789999999888877654 4566777766554443 211111 1111223455667788999999999999
Q ss_pred CccchhhhccccceeeeecCCeeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
|. ||+.....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 119 a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv~-- 195 (257)
T 1szo_A 119 VT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLS-- 195 (257)
T ss_dssp BC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEEC--
T ss_pred hH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCceEEeC--
Confidence 99 5666666799999999999887 34544433333222222223222 3689999999999999993
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+++ +..........|...|+..+
T Consensus 196 -------~~~----l~~~a~~~a~~la~~~~~a~ 218 (257)
T 1szo_A 196 -------EQE----LLPRAWELARGIAEKPLLAR 218 (257)
T ss_dssp -------HHH----HHHHHHHHHHHHHTSCHHHH
T ss_pred -------hHH----HHHHHHHHHHHHHhCCHHHH
Confidence 332 33334444566777777664
No 73
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.57 E-value=5e-07 Score=93.88 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=107.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCC-CHhHHHh-----------chHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYA-DLKSEEL-----------GQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf~LPIVtLIDTpGA~~-g~~AEe~-----------Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.++...++++.++.-.+-+|.|.-.+++++ |.+..+. .....+...+..+..+++|+|+.|
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~d~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 107 (267)
T 3hp0_A 28 NNTINDTLIEECLQVLNQCETSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHV 107 (267)
T ss_dssp TTCBCSHHHHHHHHHHHHHHHSSCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHHHHSSSEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCEEEEEECCCCceecCcCHHHHHhcccChHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3568899999999999877665677788877766555 3222211 112345566777888999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.+.|||.-....||++||.++++|+. +.|.+....+.+ ......+.+. ..++|+++++.|+||+|+|
T Consensus 108 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r-~vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~ 186 (267)
T 3hp0_A 108 RGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACVLPFLIR-RIGRQKAHYMTLMTKPISVQEASEWGLIDAFDA 186 (267)
T ss_dssp CSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHHH-HHCHHHHHHHHHHCCCBCHHHHHHHTSSSCBCS
T ss_pred CCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhHHHHHHH-HhCHHHHHHHHHcCCCCCHHHHHHCCCcceecC
Confidence 9999999999888899999999999875 334433333222 1222223332 3789999999999999995
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+. + +. .......|...|+..+
T Consensus 187 ~~------~--~~-------~~~~a~~la~~~p~a~ 207 (267)
T 3hp0_A 187 ES------D--VL-------LRKHLLRLRRLNKKGI 207 (267)
T ss_dssp CT------T--HH-------HHHHHHHHTTSCHHHH
T ss_pred CH------H--HH-------HHHHHHHHHhCCHHHH
Confidence 32 1 11 1233456777777664
No 74
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.57 E-value=9.1e-08 Score=97.01 Aligned_cols=132 Identities=20% Similarity=0.245 Sum_probs=91.2
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchh
Q 004120 218 RNFGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGA 296 (773)
Q Consensus 218 ~ngG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGA 296 (773)
+..|.+++..+....+.+..++. ..-||+..|||||-.+. .+.+|...+.. .+.|+++++.|.|.|||+
T Consensus 43 ~l~G~I~~~~a~~i~~~L~~l~~~~~k~I~l~INSPGGsv~-------a~~~I~~~i~~---~~~pV~t~v~g~AAS~g~ 112 (215)
T 2f6i_A 43 YLTDEINKKTADELISQLLYLDNINHNDIKIYINSPGGSIN-------EGLAILDIFNY---IKSDIQTISFGLVASMAS 112 (215)
T ss_dssp EECSCBCHHHHHHHHHHHHHHHHHCCSCEEEEEEECCBCHH-------HHHHHHHHHHH---SSSCEEEEEEEEECHHHH
T ss_pred EEccEECHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHH-------HHHHHHHHHHh---cCCCEEEEEeeEhHhHHH
Confidence 44577888888888777765543 23899999999996532 12345655554 567999999999999999
Q ss_pred hhccccce--eeeecCCeeeeeCHHHHH----H--------Hh----------h----hhccCchHHHHH-hcccHHHHH
Q 004120 297 LAIGCANK--LLMLENAVFYVASPEACA----A--------IL----------W----KSAKASPKAAEK-LKITGSELC 347 (773)
Q Consensus 297 lA~g~aD~--Vlm~e~A~~sVisPEgaA----s--------Il----------~----rd~~~a~eaAe~-lkitA~dL~ 347 (773)
|.++.||. ++|.|++.+++..|.+.. . +. - ++.+...+.++. .-+|+++++
T Consensus 113 ~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lta~eA~ 192 (215)
T 2f6i_A 113 VILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAK 192 (215)
T ss_dssp HHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHH
T ss_pred HHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecCHHHHH
Confidence 99999999 999999999876664221 0 00 0 000001111111 236999999
Q ss_pred HcCCceeeecCC
Q 004120 348 KLQIADGVIPEP 359 (773)
Q Consensus 348 ~lGiVD~IIpE~ 359 (773)
+.|+||.|+.++
T Consensus 193 e~GLiD~I~~~~ 204 (215)
T 2f6i_A 193 QYGIIDEVIETK 204 (215)
T ss_dssp HHTSCSEECCCS
T ss_pred HCCCCCEecCCc
Confidence 999999999654
No 75
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.56 E-value=9.3e-07 Score=92.08 Aligned_cols=169 Identities=7% Similarity=0.012 Sum_probs=109.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh------c----------hHHH----HHHHHHHHh
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL------G----------QGEA----IAHNLRTMF 277 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~------G----------qa~a----IAr~L~ams 277 (773)
..+++++.++...++++.++. ..+-+|.|.-.+++++ |.+.... . .... ....+..+.
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 109 (280)
T 1pjh_A 30 LNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFI 109 (280)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999987765 4567777776655444 3222111 0 0001 124456778
Q ss_pred CCCCcEEEEEcCCCccchhhhccccceeeee-cCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHH
Q 004120 278 GLKVPIISIVIGEGGSGGALAIGCANKLLML-ENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSEL 346 (773)
Q Consensus 278 ~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~-e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL 346 (773)
.+++|+|+.|.|.|+|||......||++||. ++++|++ +.|.++.+..+........+.+. ..++|+++
T Consensus 110 ~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltg~~~~a~eA 189 (280)
T 1pjh_A 110 KHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIM 189 (280)
T ss_dssp HCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHHH
T ss_pred hCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHH
Confidence 8999999999999999999988899999999 9999886 34444333333222222233332 36899999
Q ss_pred HHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 004120 347 CKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395 (773)
Q Consensus 347 ~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~ 395 (773)
++.|+||+|+|.+. .|++++. ..++......|...|+..+..
T Consensus 190 ~~~GLv~~vv~~~~----~~~~~l~---~~a~~~~a~~la~~~~~a~~~ 231 (280)
T 1pjh_A 190 CENGFISKNFNMPS----SNAEAFN---AKVLEELREKVKGLYLPSCLG 231 (280)
T ss_dssp HHTTCCSEECCCCT----TCHHHHH---HHHHHHHHHHHTTCCHHHHHH
T ss_pred HHCCCcceeeCCcc----ccHHHHH---HHHHHHHHHHHHcCCHHHHHH
Confidence 99999999995320 1222222 222234556788888877533
No 76
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=98.56 E-value=2e-07 Score=96.50 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=93.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhc---h----HHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELG---Q----GEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~G---q----a~aIAr~L~ams~l~VP~ISVViGe 290 (773)
..+++++.++...+.++.++. ..+-+|.|.-.++++. |.+..+.. . ...+...+..+..+++|+|+.|.|.
T Consensus 31 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 110 (263)
T 3moy_A 31 LNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGY 110 (263)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBE
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 356899999999999976654 4566777766555443 32222110 0 1122345677888999999999999
Q ss_pred CccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeecC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIpE 358 (773)
|.|||......||+++|.++++|++ +.|.+.....+........+.+ ...++|+++++.|+||+|+|.
T Consensus 111 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~ 188 (263)
T 3moy_A 111 ALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPA 188 (263)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred eehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCc
Confidence 9999998888899999999999885 2333222211111111122222 237899999999999999953
No 77
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=98.55 E-value=1.6e-06 Score=91.64 Aligned_cols=137 Identities=12% Similarity=0.099 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHhhh------cCCcEEEEecCCCCCC-CHhHHHhc-------------hHHHHHHHHHHH---hC
Q 004120 222 MPTPHGYRKALRMMYYADH------HGFPIVTFIDTPGAYA-DLKSEELG-------------QGEAIAHNLRTM---FG 278 (773)
Q Consensus 222 ~~~peg~rKA~R~m~lAek------f~LPIVtLIDTpGA~~-g~~AEe~G-------------qa~aIAr~L~am---s~ 278 (773)
+++++.++.....++.++. -.+-+|.|.-.+++++ |.+..+.. ....+...+..+ ..
T Consensus 59 al~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (305)
T 3m6n_A 59 CFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLG 138 (305)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred CCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhccccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6899999999988877654 4677887777666555 32221110 111222233333 34
Q ss_pred CCCcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHH
Q 004120 279 LKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCK 348 (773)
Q Consensus 279 l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~ 348 (773)
+++|+|+.|.|.|+|||.-....||++||.++++|+. +.|.++....+........+.+. ..++|+++++
T Consensus 139 ~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~ 218 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLG 218 (305)
T ss_dssp TTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEEHHHHHH
T ss_pred CCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHHHHHHHHHcCCCCCHHHHHH
Confidence 7999999999999999998888999999999999886 34544444333332222333332 3789999999
Q ss_pred cCCceeeecC
Q 004120 349 LQIADGVIPE 358 (773)
Q Consensus 349 lGiVD~IIpE 358 (773)
.|+||+|+|.
T Consensus 219 ~GLv~~vv~~ 228 (305)
T 3m6n_A 219 MGLVDRVVPR 228 (305)
T ss_dssp HTSCSEEECT
T ss_pred CCCCCEecCh
Confidence 9999999953
No 78
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=98.55 E-value=2.9e-07 Score=95.45 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=104.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchHH----------------HHHHHHHHHhCCCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQGE----------------AIAHNLRTMFGLKV 281 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa~----------------aIAr~L~ams~l~V 281 (773)
..+++++.+....++++.++. -.+-+|.|.-.++++. |.+..+..... .+...+..+..+++
T Consensus 32 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 111 (274)
T 3tlf_A 32 LNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAK 111 (274)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTTCSGGGGSCCCTTCCCTTSCCS
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchhhHHHHHHHHHHHHHHHHhCCC
Confidence 356999999999999987654 4566777766555443 22211111000 11123445677899
Q ss_pred cEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----Hh--cccHHHHHHc
Q 004120 282 PIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KL--KITGSELCKL 349 (773)
Q Consensus 282 P~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~l--kitA~dL~~l 349 (773)
|+|+.|.|.+.|||......||++||.++++|+. +.| +..+..+........+.+ .. .++|+++++.
T Consensus 112 PvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~~A~~l~ltg~~~~~~A~eA~~~ 190 (274)
T 3tlf_A 112 PVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRSIALRMALMGKHERMSAQRAYEL 190 (274)
T ss_dssp CEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHHHHHHHHHHGGGCCEEHHHHHHH
T ss_pred CEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHHHHHHHHHcCCCCccCHHHHHHC
Confidence 9999999999999998888899999999999885 445 444443333222222332 24 6899999999
Q ss_pred CCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 350 QIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 350 GiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+||+|+|.. .+..........|...|+..+
T Consensus 191 GLv~~vv~~~-------------~l~~~a~~~a~~la~~~~~a~ 221 (274)
T 3tlf_A 191 GLISEIVEHD-------------RLLERAHEIADIVNSNAPLAV 221 (274)
T ss_dssp TSSSEEECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCeecCHH-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 9999999532 233344445566777777664
No 79
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.54 E-value=1.7e-07 Score=94.30 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=92.3
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccch
Q 004120 218 RNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 295 (773)
Q Consensus 218 ~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGG 295 (773)
+..|.+++..+....+.+..+.. ..-||+..|||||-.+. .+.+|...+.. ++.|++++|.|.|.|||
T Consensus 31 ~l~G~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~-------a~~~I~~~i~~---~~~pV~~~v~g~AaS~g 100 (208)
T 2cby_A 31 FLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSIS-------AGMAIYDTMVL---APCDIATYAMGMAASMG 100 (208)
T ss_dssp EECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HHHHHHHHHHH---CSSCEEEEEEEEEETHH
T ss_pred EEcCEECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHH-------HHHHHHHHHHh---cCCCEEEEECcEeHHHH
Confidence 45677888889998888876654 45799999999996432 12356655554 56899999999999999
Q ss_pred hhhccccce--eeeecCCeeeeeCHHHHHHH----------------------hhhhccCchH-H----HHHhcccHHHH
Q 004120 296 ALAIGCANK--LLMLENAVFYVASPEACAAI----------------------LWKSAKASPK-A----AEKLKITGSEL 346 (773)
Q Consensus 296 AlA~g~aD~--Vlm~e~A~~sVisPEgaAsI----------------------l~rd~~~a~e-a----Ae~lkitA~dL 346 (773)
++.++.||. ++|.|++.+++..|-+...= +-+......+ . +...-+|++++
T Consensus 101 ~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA 180 (208)
T 2cby_A 101 EFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEA 180 (208)
T ss_dssp HHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHHHH
T ss_pred HHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcEEcHHHH
Confidence 999999998 89999999999887643210 0000001111 1 11234689999
Q ss_pred HHcCCceeeecC
Q 004120 347 CKLQIADGVIPE 358 (773)
Q Consensus 347 ~~lGiVD~IIpE 358 (773)
++.|+||.|+..
T Consensus 181 ~e~GLvD~i~~~ 192 (208)
T 2cby_A 181 LEYGFVDHIITR 192 (208)
T ss_dssp HHHTSCSEECSC
T ss_pred HHcCCCcEecCc
Confidence 999999999953
No 80
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=98.52 E-value=3.4e-07 Score=95.72 Aligned_cols=160 Identities=14% Similarity=0.166 Sum_probs=105.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHh---ch----HHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEEL---GQ----GEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~---Gq----a~aIAr~L~ams~l~VP~ISVViGe 290 (773)
..+++++.++...++++.++. -.+-+|.|.-.++++. |.+..+. .. .......+..+..+++|+|+.|.|.
T Consensus 46 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 125 (278)
T 3h81_A 46 LNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGY 125 (278)
T ss_dssp TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECBE
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhhHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence 457999999999999987664 4566777766554443 2221111 00 0111122566788999999999999
Q ss_pred CccchhhhccccceeeeecCCeeee------eCHH-HHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV------ASPE-ACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEP 359 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV------isPE-gaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~ 359 (773)
|.|||+.....||++||.++++|+. +.|. |....+.+ ......+.+. ..++|+++++.|+||+|+|..
T Consensus 126 a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r-~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~ 204 (278)
T 3h81_A 126 ALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTR-AIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPAD 204 (278)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHH-HHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred eehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHH-HhCHHHHHHHHHhCCCcCHHHHHHCCCccEEeChh
Confidence 9999998888899999999999885 3333 33333322 2222222222 368999999999999999532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 360 LGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 360 lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.+..........|...|+..+
T Consensus 205 -------------~l~~~a~~~a~~la~~~p~a~ 225 (278)
T 3h81_A 205 -------------DLLTEARATATTISQMSASAA 225 (278)
T ss_dssp -------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred -------------HHHHHHHHHHHHHHhCCHHHH
Confidence 233344455566777777764
No 81
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=98.52 E-value=4.5e-07 Score=95.28 Aligned_cols=162 Identities=12% Similarity=0.108 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCCCH-hH----HH-h-------chHHHHHHHHHHHhCCCCcEEE
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYADL-KS----EE-L-------GQGEAIAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~g~-~A----Ee-~-------Gqa~aIAr~L~ams~l~VP~IS 285 (773)
.+++++.++...+.++.++. -.+=+|.|.-.++ |+.+- +. .. . .....+.+.+..+..+++|+|+
T Consensus 29 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 108 (289)
T 3h0u_A 29 NLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIA 108 (289)
T ss_dssp CCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHTCSSEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 56999999999999987764 4466777765442 33221 11 00 0 1112345667788899999999
Q ss_pred EEcCCCccchhhhccccceeeeecC-Ceeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCcee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLEN-AVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADG 354 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~-A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~ 354 (773)
.|.|.|.|||......||++||.++ ++|+. +.|.+.....+........+.+. ..++|+++++.|+||+
T Consensus 109 aV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~ 188 (289)
T 3h0u_A 109 KLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAERYGWVNR 188 (289)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccE
Confidence 9999999999998888999999998 99885 33433333222222222223222 3689999999999999
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 004120 355 VIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395 (773)
Q Consensus 355 IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~ 395 (773)
|+| +++ +..........|...|+..+..
T Consensus 189 vv~---------~~~----l~~~a~~lA~~la~~~p~a~~~ 216 (289)
T 3h0u_A 189 AVP---------DAE----LDEFVAGIAARMSGFPRDALIA 216 (289)
T ss_dssp EEC---------HHH----HHHHHHHHHHHHHTSCHHHHHH
T ss_pred ecC---------HHH----HHHHHHHHHHHHHhCCHHHHHH
Confidence 994 332 3444445556788888877533
No 82
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=98.51 E-value=1.6e-06 Score=89.92 Aligned_cols=158 Identities=21% Similarity=0.175 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-----CCCCH-----hHHH-hchHHHHHHHHHHHhCCCCcEEEEEcC
Q 004120 222 MPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-----AYADL-----KSEE-LGQGEAIAHNLRTMFGLKVPIISIVIG 289 (773)
Q Consensus 222 ~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-----A~~g~-----~AEe-~Gqa~aIAr~L~ams~l~VP~ISVViG 289 (773)
+++++.++...++++.++. ..+-+|.|.-.++ +.+.. ..+. ......+.+.+..+..+++|+|+.|.|
T Consensus 47 al~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G 126 (263)
T 2j5g_A 47 VFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNG 126 (263)
T ss_dssp EECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 5789999998888876654 4566777655433 33221 0010 111222345667788899999999999
Q ss_pred CCccchhhhccccceeeeecCCeeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecC
Q 004120 290 EGGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 290 eg~GGGAlA~g~aD~Vlm~e~A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
.|. ||+.....||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|.
T Consensus 127 ~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~ 205 (263)
T 2j5g_A 127 AAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQ 205 (263)
T ss_dssp EEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSEEECG
T ss_pred cch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEecCh
Confidence 999 6766666799999999999876 33333322222211111222222 36899999999999999953
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 359 PLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 359 ~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
. .+..........|...|+..+
T Consensus 206 ~-------------~l~~~a~~~a~~la~~~~~a~ 227 (263)
T 2j5g_A 206 S-------------KLMERAWEIARTLAKQPTLNL 227 (263)
T ss_dssp G-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred H-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 2 122333334455666676654
No 83
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=98.51 E-value=7.1e-07 Score=95.45 Aligned_cols=162 Identities=12% Similarity=0.136 Sum_probs=108.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh----------------------------------
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL---------------------------------- 263 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~---------------------------------- 263 (773)
..+++++.++....+++.++. -.+-+|.|.-.+++++. .+....
T Consensus 56 ~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (333)
T 3njd_A 56 GNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWD 135 (333)
T ss_dssp TTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHHHTTCSSSCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccccccccccccccccccccccccccccc
Confidence 356899999999999987754 56778888777665542 221110
Q ss_pred -----chHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeeee------CHHHHHHHhhhhccCc
Q 004120 264 -----GQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVA------SPEACAAILWKSAKAS 332 (773)
Q Consensus 264 -----Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sVi------sPEgaAsIl~rd~~~a 332 (773)
.....+.+.+..+..+++|+|+.|.|.|.|||......||++||.++++|+.- .|.+. .|......
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~pe~~lG~~P~~g---~l~~~vG~ 212 (333)
T 3njd_A 136 PMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGD 212 (333)
T ss_dssp HHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEECGGGGTTCCCTTC---CHHHHHCH
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeeechhhceeccCHHH---HHHHHHHH
Confidence 01122333455677799999999999999999998889999999999998751 22221 12222222
Q ss_pred hHHHHH----hcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 004120 333 PKAAEK----LKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHR 397 (773)
Q Consensus 333 ~eaAe~----lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~~R 397 (773)
..+.+. ..++|+++++.|+||+|+|.. .+..........|...|+..+...+
T Consensus 213 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~-------------~l~~~a~~lA~~ia~~~~~al~~~K 268 (333)
T 3njd_A 213 QRAKRLLFTGDCITGAQAAEWGLAVEAPDPA-------------DLDARTERLVERIAAMPVNQLIMAK 268 (333)
T ss_dssp HHHHHHHTTCCEEEHHHHHHTTSSSBCCCGG-------------GHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCHHHHHHCCCccEecChH-------------HHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 223333 268999999999999999532 3444455556778888988864433
No 84
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=98.51 E-value=5e-07 Score=95.36 Aligned_cols=139 Identities=11% Similarity=0.036 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhc----h-------------HHHHHHHHHHHhCCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELG----Q-------------GEAIAHNLRTMFGLK 280 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~G----q-------------a~aIAr~L~ams~l~ 280 (773)
..+++++.++...++++.++. -.+-+|.|.-.++++. |.+..+.. . .......+..+..++
T Consensus 51 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 130 (298)
T 3qre_A 51 LNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLR 130 (298)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------------------CCTTGGGGSS
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 357999999999999987664 4567777776665544 22211110 0 001112334567789
Q ss_pred CcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcC
Q 004120 281 VPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQ 350 (773)
Q Consensus 281 VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lG 350 (773)
+|+|+.|.|.|+|||......||++||.++++|+. +.|.++.+..+........+.+. ..++|+++++.|
T Consensus 131 kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltg~~i~A~eA~~~G 210 (298)
T 3qre_A 131 KPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQLG 210 (298)
T ss_dssp SCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHTT
T ss_pred CCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHcC
Confidence 99999999999999999888999999999999886 22333223222222222223232 368999999999
Q ss_pred CceeeecC
Q 004120 351 IADGVIPE 358 (773)
Q Consensus 351 iVD~IIpE 358 (773)
+||+|+|.
T Consensus 211 LV~~vv~~ 218 (298)
T 3qre_A 211 LVKEVVTP 218 (298)
T ss_dssp SCSEEECG
T ss_pred CCeEecCH
Confidence 99999953
No 85
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=98.47 E-value=4.9e-07 Score=94.92 Aligned_cols=160 Identities=8% Similarity=0.048 Sum_probs=106.6
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-CCCC-CHhHHHhc--------------hHHHHHHHHHHHhCCCCcE
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-GAYA-DLKSEELG--------------QGEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-GA~~-g~~AEe~G--------------qa~aIAr~L~ams~l~VP~ 283 (773)
.+++++.++...++++.++. -.+-+|.|.-.+ ++++ |.+..+.. ....+.+.+..+..+++|+
T Consensus 30 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 109 (287)
T 3gkb_A 30 NVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQPQVT 109 (287)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHHHHHHHCSSEE
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 56999999999999987764 456677776544 3332 32111110 0112345667788899999
Q ss_pred EEEEcCCCccchhhhccccceeeeec-CCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCc
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLE-NAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIA 352 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e-~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiV 352 (773)
|+.|.|.+.|||.-....||++||.+ +++|+. +.|.+..+..+........+.+. ..++|+++++.|+|
T Consensus 110 IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV 189 (287)
T 3gkb_A 110 IVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWI 189 (287)
T ss_dssp EEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSS
T ss_pred EEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCC
Confidence 99999999999999888999999999 999886 33443333322222222223332 36899999999999
Q ss_pred eeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 353 DGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 353 D~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+|+| +++ +..........|...|+..+
T Consensus 190 ~~vv~---------~~~----l~~~a~~lA~~la~~~p~a~ 217 (287)
T 3gkb_A 190 NRALP---------ADE----LDEYVDRVARNIAALPDGVI 217 (287)
T ss_dssp SEEEC---------HHH----HHHHHHHHHHHHHTSCTTHH
T ss_pred cEEeC---------hhH----HHHHHHHHHHHHHcCCHHHH
Confidence 99994 332 44444455567777777664
No 86
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=98.47 E-value=1.6e-06 Score=89.33 Aligned_cols=160 Identities=12% Similarity=0.084 Sum_probs=102.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchHH---HHHH-HHHHHhCCCCcEEEEEcCCCcc
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQGE---AIAH-NLRTMFGLKVPIISIVIGEGGS 293 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa~---aIAr-~L~ams~l~VP~ISVViGeg~G 293 (773)
..+++++.+....++++.++. ..+-+|.|.-.+++++ |.+..+..... .... .+..+ .+++|+|+.|.|.+.|
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~-~~~kPvIAav~G~a~G 106 (256)
T 3trr_A 28 RNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLGFTNV-PPRKPIIAAVEGFALA 106 (256)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEETTEETTSSS-CCSSCEEEEECSBCCT
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhhhhhhHHHh-cCCCCEEEEECCeeee
Confidence 356899999999999987665 4577787776665554 33222210000 0000 12233 6799999999999999
Q ss_pred chhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCCCCC
Q 004120 294 GGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPLGGA 363 (773)
Q Consensus 294 GGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~lGgA 363 (773)
||+.....||+++|.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 107 gG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~---- 182 (256)
T 3trr_A 107 GGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVDDG---- 182 (256)
T ss_dssp HHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHGGGTCCSEEECTT----
T ss_pred chhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCeeEecChH----
Confidence 9999888999999999999874 33333333222222222223332 368999999999999999643
Q ss_pred CCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 364 HADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 364 h~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+ +..........|...|+..+
T Consensus 183 --~-------l~~~a~~~a~~la~~~~~a~ 203 (256)
T 3trr_A 183 --Q-------ALDTALELAAKITANGPLAV 203 (256)
T ss_dssp --C-------HHHHHHHHHHHHHTSCHHHH
T ss_pred --H-------HHHHHHHHHHHHHcCCHHHH
Confidence 2 22333344456677777665
No 87
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=98.47 E-value=3e-07 Score=95.03 Aligned_cols=139 Identities=13% Similarity=0.056 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchH---------HHHHHHHHHH-hCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQG---------EAIAHNLRTM-FGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa---------~aIAr~L~am-s~l~VP~ISVV 287 (773)
..+++++.++...++++.++. ..+-+|.|.-.++++. |.+..+.... ......+..+ ..+++|+|+.|
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav 109 (265)
T 3swx_A 30 RNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAV 109 (265)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 356899999999999987654 4567777776665444 3332221110 0111223345 67899999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.+.|||+.....||++||.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 110 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~ 189 (265)
T 3swx_A 110 HGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVP 189 (265)
T ss_dssp CSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEES
T ss_pred cCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHHHcCCcCCHHHHHHcCCCCEecC
Confidence 9999999998888899999999999885 33443333322222222233332 3689999999999999995
Q ss_pred C
Q 004120 358 E 358 (773)
Q Consensus 358 E 358 (773)
.
T Consensus 190 ~ 190 (265)
T 3swx_A 190 V 190 (265)
T ss_dssp T
T ss_pred h
Confidence 4
No 88
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=98.47 E-value=5.8e-07 Score=93.33 Aligned_cols=139 Identities=13% Similarity=0.063 Sum_probs=92.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-CCCC-CHhHHH---------hchHHHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-GAYA-DLKSEE---------LGQGEAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-GA~~-g~~AEe---------~Gqa~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.+....++++.++. ..+-+|.|.-.+ ++++ |.+..+ ......+...+..+..+++|+|+.|
T Consensus 33 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 112 (272)
T 1hzd_A 33 KNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAI 112 (272)
T ss_dssp TTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 356889999999998877654 456677766544 2222 322111 1111234455677888999999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIp 357 (773)
.|.|.|||+.....||+++|.++++|+. +.|.+.....+........+.+ ...++|+++++.|+||+|+|
T Consensus 113 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~ 192 (272)
T 1hzd_A 113 DGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE 192 (272)
T ss_dssp SEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEEC
T ss_pred CceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCcceecC
Confidence 9999999998888899999999999875 2333222222221111122222 24789999999999999996
Q ss_pred C
Q 004120 358 E 358 (773)
Q Consensus 358 E 358 (773)
.
T Consensus 193 ~ 193 (272)
T 1hzd_A 193 Q 193 (272)
T ss_dssp C
T ss_pred h
Confidence 4
No 89
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=98.47 E-value=1.1e-06 Score=92.30 Aligned_cols=160 Identities=13% Similarity=0.137 Sum_probs=104.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCC-CHhHHHh----------c-hHHHHHHHHHHHhCCCCcEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYA-DLKSEEL----------G-QGEAIAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~-g~~AEe~----------G-qa~aIAr~L~ams~l~VP~IS 285 (773)
..+++++.+....++++.++. -.+-+|.|.-.++ +++ |.+.... + ....+...+..+..+++|+|+
T Consensus 49 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 128 (289)
T 3t89_A 49 RNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVA 128 (289)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------------CTHHHHHHHHHHCSSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHHHHcCCCCEEE
Confidence 457999999999999987654 4566777766553 332 2111000 0 011234566677889999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCcee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADG 354 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~ 354 (773)
.|.|.|.|||......||++||.++++|+. ++|.+....+.+ ......+.+. ..++|+++++.|+||+
T Consensus 129 aV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r-~vG~~~A~~llltG~~i~A~eA~~~GLV~~ 207 (289)
T 3t89_A 129 MVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMAR-IVGQKKAREIWFLCRQYDAKQALDMGLVNT 207 (289)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHH-HHCHHHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHH-hcCHHHHHHHHHcCCcccHHHHHHCCCceE
Confidence 999999999999888899999999999886 333333222222 1122222222 3689999999999999
Q ss_pred eecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 355 VIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 355 IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
|+|.. .+..........|...|+..+
T Consensus 208 vv~~~-------------~l~~~a~~~A~~la~~~~~a~ 233 (289)
T 3t89_A 208 VVPLA-------------DLEKETVRWCREMLQNSPMAL 233 (289)
T ss_dssp EECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred eeCHH-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 99532 233334444556666676654
No 90
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=98.46 E-value=6.1e-07 Score=96.39 Aligned_cols=160 Identities=16% Similarity=0.093 Sum_probs=104.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-------CCC-CHhHHHhc--------------------hHHHHH
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-------AYA-DLKSEELG--------------------QGEAIA 270 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-------A~~-g~~AEe~G--------------------qa~aIA 270 (773)
..+++++.++...++++.++. -.+=+|.|.-.++ +++ |.+....+ ....+.
T Consensus 78 ~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (334)
T 3t8b_A 78 RNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHIL 157 (334)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC----------------------CCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccchhhhHHHHHHHHHH
Confidence 357999999999999987765 4566777765542 222 21111100 001233
Q ss_pred HHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeee-cCCeeee------eCHHH-HHHHhhhhccCchHHHHH----
Q 004120 271 HNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLML-ENAVFYV------ASPEA-CAAILWKSAKASPKAAEK---- 338 (773)
Q Consensus 271 r~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~-e~A~~sV------isPEg-aAsIl~rd~~~a~eaAe~---- 338 (773)
..+..+..+++|+|+.|.|.|.|||.-....||++||. ++|+|+. +.|.+ ....+.+ ......+.+.
T Consensus 158 ~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r-~vG~~~A~ellltG 236 (334)
T 3t8b_A 158 EVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLAR-QVGQKFAREIFFLG 236 (334)
T ss_dssp HHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHH-HHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHH-HhhHHHHHHHHHhC
Confidence 45667778999999999999999999988899999999 9999885 22332 2222222 1111222222
Q ss_pred hcccHHHHHHcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 339 LKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 339 lkitA~dL~~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
..++|+++++.|+||+|+|.. .|..........|...++..+
T Consensus 237 ~~i~A~eA~~~GLV~~vv~~~-------------~l~~~a~~~A~~ia~~~p~a~ 278 (334)
T 3t8b_A 237 RTYTAEQMHQMGAVNAVAEHA-------------ELETVGLQWAAEINAKSPQAQ 278 (334)
T ss_dssp CEEEHHHHHHHTSCSEEECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred CcCCHHHHHHCCCCcEecCHH-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 368999999999999999532 234444455567778888775
No 91
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=98.44 E-value=3.9e-07 Score=94.37 Aligned_cols=162 Identities=13% Similarity=0.109 Sum_probs=101.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHhch-------HHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEELGQ-------GEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~Gq-------a~aIAr~L~ams~l~VP~ISVViGe 290 (773)
..+++++.+....++++.++. ..+-+|.|.-.++++.. .+..+... .......+..+..+++|+|+.|.|.
T Consensus 32 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~ 111 (262)
T 3r9q_A 32 RNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGH 111 (262)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTSSCTTSSTTCCCSSCEEEEECSE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhhhhHHHHHHHhCCCCEEEEECCe
Confidence 356999999999999987654 45677777766655542 22111100 0001112223457899999999999
Q ss_pred CccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPL 360 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~l 360 (773)
+.|||......||+++|.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 112 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~- 190 (262)
T 3r9q_A 112 AVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARG- 190 (262)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT-
T ss_pred eehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEecChh-
Confidence 9999999888999999999999875 23332222222222222222222 368999999999999999643
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 361 GGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 361 GgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
+ +..........|...|+..+.
T Consensus 191 -----~-------l~~~a~~~a~~la~~~~~a~~ 212 (262)
T 3r9q_A 191 -----Q-------AREAAETLAAEIAAFPQQCVR 212 (262)
T ss_dssp -----C-------HHHHHHHHHHHHHHSCHHHHH
T ss_pred -----H-------HHHHHHHHHHHHHhCCHHHHH
Confidence 2 222333334555566666643
No 92
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=98.44 E-value=1.8e-06 Score=89.41 Aligned_cols=161 Identities=11% Similarity=0.077 Sum_probs=102.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhchHH----HHHH-HHHHHhCCCCcEEEEEcCCCc
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQGE----AIAH-NLRTMFGLKVPIISIVIGEGG 292 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gqa~----aIAr-~L~ams~l~VP~ISVViGeg~ 292 (773)
..+++++.+....++++.++. ..+-+|.|.-.+++++ |.+..+..... .... .+..+.. ++|+|+.|.|.|.
T Consensus 36 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~-~kPvIAav~G~a~ 114 (265)
T 3qxi_A 36 KNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGLGFTERPP-AKPLIAAVEGYAL 114 (265)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETTTEETTTTSCC-SSCEEEEECSEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhhhhhhHHHhhC-CCCEEEEECCcee
Confidence 357899999999999987654 4577777776665554 32222111000 0000 0233333 7999999999999
Q ss_pred cchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeecCCCCC
Q 004120 293 SGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIPEPLGG 362 (773)
Q Consensus 293 GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIpE~lGg 362 (773)
|||......||++||.++++|++ +.|.+.....+........+.+. ..++|+++++.|+||+|+|..
T Consensus 115 GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~--- 191 (265)
T 3qxi_A 115 AGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHALGMVNVLAEPG--- 191 (265)
T ss_dssp THHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTT---
T ss_pred HHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeChh---
Confidence 99998888899999999999875 23333333222222222223232 378999999999999999642
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHcCCCHHHHH
Q 004120 363 AHADPSWTSQQIKIAINESMDELGKMDTQELL 394 (773)
Q Consensus 363 Ah~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~ 394 (773)
+ +..........|...|+..+.
T Consensus 192 ---~-------l~~~a~~~a~~la~~~p~a~~ 213 (265)
T 3qxi_A 192 ---A-------ALDAAIALAEKITANGPLAVA 213 (265)
T ss_dssp ---C-------HHHHHHHHHHHHHTSCHHHHH
T ss_pred ---H-------HHHHHHHHHHHHHcCCHHHHH
Confidence 2 333444455677788887753
No 93
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=98.44 E-value=6.6e-07 Score=92.97 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=90.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC------CCCCCHhHH--H---hch-HHHHHHHHHHHhCCCCcEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP------GAYADLKSE--E---LGQ-GEAIAHNLRTMFGLKVPIISI 286 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp------GA~~g~~AE--e---~Gq-a~aIAr~L~ams~l~VP~ISV 286 (773)
..+++++.+....+.++.++. ..+-+|.|.-.+ |+.+..-.. . ... ...+...+..+..+++|+|+.
T Consensus 34 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 113 (273)
T 2uzf_A 34 RNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAM 113 (273)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCCCTHHHHHHHHHHSSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHHhhHHHHHHHHHhCCCCEEEE
Confidence 357999999999999977654 456666665443 444432111 0 000 001234556677789999999
Q ss_pred EcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeee
Q 004120 287 VIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVI 356 (773)
Q Consensus 287 ViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~II 356 (773)
|.|.|.|||+.....||++||.++++|+. +.|.++....+........+.+. ..++|+++++.|+||+|+
T Consensus 114 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv 193 (273)
T 2uzf_A 114 VKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVV 193 (273)
T ss_dssp ECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHHTCCCEEHHHHHHHTSSSEEE
T ss_pred ECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCcccc
Confidence 99999999998888899999999999885 33333222222211111222222 368999999999999999
Q ss_pred c
Q 004120 357 P 357 (773)
Q Consensus 357 p 357 (773)
+
T Consensus 194 ~ 194 (273)
T 2uzf_A 194 P 194 (273)
T ss_dssp C
T ss_pred C
Confidence 5
No 94
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=98.43 E-value=7.6e-06 Score=85.33 Aligned_cols=159 Identities=15% Similarity=0.110 Sum_probs=102.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh-------ch-------HHHHHHHHHHHhCCCCcE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL-------GQ-------GEAIAHNLRTMFGLKVPI 283 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~-------Gq-------a~aIAr~L~ams~l~VP~ 283 (773)
..+++++.++...++++.++. -.+-+|.|.-.++++.. .+.... +. ...+...+..+..+++|+
T Consensus 41 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 120 (279)
T 3t3w_A 41 ANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPS 120 (279)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHHHHHHHHTHHHHHHHHHCSSCE
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 457999999999999987764 45778888776665542 111100 00 112234456778899999
Q ss_pred EEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCce
Q 004120 284 ISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIAD 353 (773)
Q Consensus 284 ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD 353 (773)
|+.|.|.|.|||.-....||+++|.++++|+. ++|-+. .++........+.+ ...++|+++++.|+||
T Consensus 121 IAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~~~~~--~~~~~~vG~~~A~~llltG~~i~A~eA~~~GLv~ 198 (279)
T 3t3w_A 121 IAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEY--HGHTWELGPRKAKEILFTGRAMTAEEVAQTGMVN 198 (279)
T ss_dssp EEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCSSCSS--CCHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCS
T ss_pred EEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCCCchH--HHHHhhcCHHHHHHHHHcCCccCHHHHHHCCCCc
Confidence 99999999999988888899999999999875 111111 11111111112222 2368999999999999
Q ss_pred eeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 354 GVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 354 ~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+|+|.. .+..........|...|+..+
T Consensus 199 ~vv~~~-------------~l~~~a~~~a~~la~~~~~a~ 225 (279)
T 3t3w_A 199 RVVPRD-------------RLDAETRALAGEIAKMPPFAL 225 (279)
T ss_dssp EEECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred EeeChH-------------HHHHHHHHHHHHHHcCCHHHH
Confidence 999532 233333444455666676654
No 95
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=98.42 E-value=3.7e-07 Score=94.12 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=89.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhc---hHH----HHHHHHHHHhCCCCcEEEEEcCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELG---QGE----AIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~G---qa~----aIAr~L~ams~l~VP~ISVViGe 290 (773)
..+++++.++...+.++.++. .++=+|.|.-.++++. |.+..+.. ... .+.+.+..+..+++|+|+.|.|.
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 107 (260)
T 1mj3_A 28 LNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGY 107 (260)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 457999999999999987654 4566776665543332 32221110 000 11122456677899999999999
Q ss_pred CccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceeeecC
Q 004120 291 GGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 291 g~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~IIpE 358 (773)
|.|||......||+++|.++++|+. +.|.+.....+........+.+ ...++|+++++.|+||+|+|.
T Consensus 108 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~ 185 (260)
T 1mj3_A 108 ALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPV 185 (260)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECT
T ss_pred EEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEEeCh
Confidence 9999998888899999999999885 2232222211111111122222 236899999999999999953
No 96
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=98.42 E-value=9.1e-07 Score=92.18 Aligned_cols=160 Identities=14% Similarity=0.136 Sum_probs=103.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEec-----CC------CCCCCHhHHH-----hchH-HHHHHHHHHHhCCCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFID-----TP------GAYADLKSEE-----LGQG-EAIAHNLRTMFGLKV 281 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLID-----Tp------GA~~g~~AEe-----~Gqa-~aIAr~L~ams~l~V 281 (773)
..+++++.+....++++.++. -.+=+|.|.- .+ |+.+..-... .+.. ..+...+..+..+++
T Consensus 31 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 110 (275)
T 4eml_A 31 RNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPK 110 (275)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------------CCCHHHHHHHHHHSSS
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccchhhHHHHHHHHHHHHHHhCCC
Confidence 357999999999999987654 4566777765 33 2222211110 0000 013455667788999
Q ss_pred cEEEEEcCCCccchhhhccccceeeeecCCeeee-------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcC
Q 004120 282 PIISIVIGEGGSGGALAIGCANKLLMLENAVFYV-------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQ 350 (773)
Q Consensus 282 P~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV-------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lG 350 (773)
|+|+.|.|.|.|||.-....||++||.++++|+. ++|.+....+.+ ......+.+. ..++|+++++.|
T Consensus 111 PvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r-~vG~~~A~~llltg~~i~A~eA~~~G 189 (275)
T 4eml_A 111 VVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLAR-IVGQKKAREIWYLCRQYSAQEAERMG 189 (275)
T ss_dssp EEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHH-HHCHHHHHHHHHHCCCEEHHHHHHHT
T ss_pred CEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHH-HhHHHHHHHHHHhCCCcCHHHHHHcC
Confidence 9999999999999998888899999999999886 333333333322 1122222222 368999999999
Q ss_pred CceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 351 IADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 351 iVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+||+|+|.. .+..........|...|+..+
T Consensus 190 Lv~~vv~~~-------------~l~~~a~~~a~~la~~~~~a~ 219 (275)
T 4eml_A 190 MVNTVVPVD-------------RLEEEGIQWAKEILSKSPLAI 219 (275)
T ss_dssp SCSEEECGG-------------GHHHHHHHHHHHHHTSCHHHH
T ss_pred CccEeeCHH-------------HHHHHHHHHHHHHHhCCHHHH
Confidence 999999532 233444455566777787765
No 97
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=98.42 E-value=3.1e-07 Score=94.57 Aligned_cols=161 Identities=10% Similarity=0.043 Sum_probs=103.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhch---------HHHHHHHHHHH-hCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELGQ---------GEAIAHNLRTM-FGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~Gq---------a~aIAr~L~am-s~l~VP~ISVV 287 (773)
..+++++.+....+.++.++. ..+-+|.|.-.++++. |.+..+... ...+...+..+ ..+++|+|+.|
T Consensus 33 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav 112 (258)
T 3lao_A 33 RNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAV 112 (258)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 356999999999999987664 4577787777665444 333222110 01112234456 78899999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.+.|||......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 113 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~ 192 (258)
T 3lao_A 113 QGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDADEALRMRLLTEVVE 192 (258)
T ss_dssp CSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEEC
T ss_pred CCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCcEeeC
Confidence 9999999999888999999999999886 33433222211111112223332 2689999999999999996
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
.. +. ..........|...|+..+
T Consensus 193 ~~------~l-------~~~a~~~a~~la~~~~~a~ 215 (258)
T 3lao_A 193 PG------EE-------LARALEYAERIARAAPLAV 215 (258)
T ss_dssp TT------CH-------HHHHHHHHHHHHHSCHHHH
T ss_pred hh------HH-------HHHHHHHHHHHHhCCHHHH
Confidence 42 22 2222234455666676664
No 98
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.42 E-value=4.5e-07 Score=95.47 Aligned_cols=136 Identities=19% Similarity=0.267 Sum_probs=97.0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHh--hhcCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 213 KENIQRNFGMPTPHGYRKALRMMYYA--DHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 213 ~e~~~~ngG~~~peg~rKA~R~m~lA--ekf~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
++++-+.+|.+++..+....+.+..+ +...-+|+..|||||-.+. .+.+|...+.. .+.|+++++.|.
T Consensus 81 ~erII~l~G~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGGsV~-------ag~aIyd~I~~---~k~pV~t~v~G~ 150 (277)
T 1tg6_A 81 RERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVT-------AGLAIYDTMQY---ILNPICTWCVGQ 150 (277)
T ss_dssp TTTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HHHHHHHHHHH---SCSCEEEEEEEE
T ss_pred cCcEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHH-------HHHHHHHHHHh---cCCCEEEEEccE
Confidence 45555778999999999988888654 3356899999999996542 12345655544 568999999999
Q ss_pred Cccchhhhccccce--eeeecCCeeeeeCHHHH----HH-H--hhhhc----------------cCchHHHHH----hcc
Q 004120 291 GGSGGALAIGCANK--LLMLENAVFYVASPEAC----AA-I--LWKSA----------------KASPKAAEK----LKI 341 (773)
Q Consensus 291 g~GGGAlA~g~aD~--Vlm~e~A~~sVisPEga----As-I--l~rd~----------------~~a~eaAe~----lki 341 (773)
+.|||+|.++.||. ++|.|++.+++..|-+. ++ + ..+.. ....+..+. .-+
T Consensus 151 AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~l 230 (277)
T 1tg6_A 151 AASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYM 230 (277)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEE
T ss_pred eHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCccc
Confidence 99999999999998 99999999998776321 11 1 00000 001112222 236
Q ss_pred cHHHHHHcCCceeeecC
Q 004120 342 TGSELCKLQIADGVIPE 358 (773)
Q Consensus 342 tA~dL~~lGiVD~IIpE 358 (773)
|++++++.|+||.|+..
T Consensus 231 ta~EAle~GLID~I~~~ 247 (277)
T 1tg6_A 231 SPMEAQEFGILDKVLVH 247 (277)
T ss_dssp CHHHHHHHTSCSEECSS
T ss_pred CHHHHHHCCCCCEecCc
Confidence 99999999999999954
No 99
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=98.37 E-value=2.3e-06 Score=88.75 Aligned_cols=162 Identities=10% Similarity=0.000 Sum_probs=104.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCC-CHhHHHhch------H---HHHHHHHHHHhCCCCcEEEEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYA-DLKSEELGQ------G---EAIAHNLRTMFGLKVPIISIV 287 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~-g~~AEe~Gq------a---~aIAr~L~ams~l~VP~ISVV 287 (773)
..+++++.++...++++.++. ..+-+|.|.-.++ +++ |.+..+... . ..+...+ ....+++|+|+.|
T Consensus 30 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~kPvIAav 108 (267)
T 3r9t_A 30 RNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHPEWGFAGY-VRHFIDKPTIAAV 108 (267)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCGGGCGGGT-TTCCCSSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHHhHHHHHH-HHHhCCCCEEEEE
Confidence 456899999999999987664 4577777776663 443 322221100 0 0000112 1237899999999
Q ss_pred cCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 288 IGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 288 iGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
.|.+.|||......||++||.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 109 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~ 188 (267)
T 3r9t_A 109 NGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVE 188 (267)
T ss_dssp CSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHHTSSSEEEC
T ss_pred CCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEEcC
Confidence 9999999999888899999999999875 33444333333222222233332 3689999999999999996
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 004120 358 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395 (773)
Q Consensus 358 E~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l~~ 395 (773)
.. + +..........|...|+..+..
T Consensus 189 ~~------~-------l~~~a~~~a~~la~~~p~a~~~ 213 (267)
T 3r9t_A 189 AG------S-------VLDAALALASAITVNAPLSVQA 213 (267)
T ss_dssp TT------C-------HHHHHHHHHHHHHTSCHHHHHH
T ss_pred hh------H-------HHHHHHHHHHHHHhCChHHHHH
Confidence 43 2 3333444456777888877533
No 100
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=98.37 E-value=3.9e-06 Score=90.63 Aligned_cols=154 Identities=11% Similarity=0.042 Sum_probs=104.7
Q ss_pred EECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCC-CHhHHHh--------
Q 004120 195 SMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYA-DLKSEEL-------- 263 (773)
Q Consensus 195 rI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~-g~~AEe~-------- 263 (773)
.++|.-..|.-|++. ...+++++.++.....++.++. -.+-+|.|.-+++ +++ |.+..+.
T Consensus 14 e~~~~Va~itLnrP~---------~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~ 84 (353)
T 4hdt_A 14 NVEGGVGLLTLNRPK---------AINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADG 84 (353)
T ss_dssp EEETTEEEEEECCGG---------GTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTS
T ss_pred EEECCEEEEEEcCCC---------ccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhh
Confidence 345654445555542 2356999999999999876654 5677888876653 343 4322111
Q ss_pred ----chHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCch
Q 004120 264 ----GQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASP 333 (773)
Q Consensus 264 ----Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~ 333 (773)
.......+.+..+..+++|+|+.|.|.++|||.-....||++||.++++|+. +.|.+..+.+....-. .
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~ 163 (353)
T 4hdt_A 85 AEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-K 163 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-T
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-H
Confidence 1122334556677889999999999999999999888999999999999886 3444444443333222 2
Q ss_pred HHHHH----hcccHHHHHHcCCceeeecC
Q 004120 334 KAAEK----LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 334 eaAe~----lkitA~dL~~lGiVD~IIpE 358 (773)
.+.+. ..++|.++++.|+||.|+|.
T Consensus 164 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 192 (353)
T 4hdt_A 164 LGLHAALTGAPFSGADAIVMGFADHYVPH 192 (353)
T ss_dssp HHHHHHHHCCCBCHHHHHHHTSCSEECCG
T ss_pred HHHHHHhcCCCCCHHHHHHcCCCcEEeCH
Confidence 23332 36899999999999999964
No 101
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.36 E-value=1.6e-06 Score=87.14 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=92.9
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 214 ENIQRNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 214 e~~~~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++-+.+|.+++..+....+.+..++. ..-||+..|||||-.+.. +.+|...+. ..+.|+++++.|.|
T Consensus 30 ~riI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpGG~v~~-------~~~I~~~i~---~~~~~v~t~~~G~A 99 (201)
T 3p2l_A 30 ERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMVTA-------GMGVYDTMQ---FIKPDVSTICIGLA 99 (201)
T ss_dssp TTEEEEESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHH-------HHHHHHHHH---HSSSCEEEEEEEEE
T ss_pred CCEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHH-------HHHHHHHHH---HhCCCeEEEEcCEe
Confidence 444466788999998888888776654 357999999999954321 224555544 45689999999999
Q ss_pred ccchhhhccccce--eeeecCCeeeeeCHHHH-----HH-------H----------hhhhccCchH-HHHH----hccc
Q 004120 292 GSGGALAIGCANK--LLMLENAVFYVASPEAC-----AA-------I----------LWKSAKASPK-AAEK----LKIT 342 (773)
Q Consensus 292 ~GGGAlA~g~aD~--Vlm~e~A~~sVisPEga-----As-------I----------l~rd~~~a~e-aAe~----lkit 342 (773)
.|+|++.++.+|. ++|.|++.+.+-.|-+. .. + +-.......+ ..+. .-+|
T Consensus 100 aS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~lt 179 (201)
T 3p2l_A 100 ASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMM 179 (201)
T ss_dssp ETHHHHHHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEE
T ss_pred hhHHHHHHHcCccCCEEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCeeec
Confidence 9999999988997 99999999887655321 00 0 0000011111 1122 1368
Q ss_pred HHHHHHcCCceeeecC
Q 004120 343 GSELCKLQIADGVIPE 358 (773)
Q Consensus 343 A~dL~~lGiVD~IIpE 358 (773)
|++.++.|+||.|+..
T Consensus 180 a~EA~e~GliD~I~~~ 195 (201)
T 3p2l_A 180 ADEAKAYGLIDHVIES 195 (201)
T ss_dssp HHHHHHHTSCSEECCC
T ss_pred HHHHHHcCCccEecCC
Confidence 9999999999999943
No 102
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.34 E-value=2.3e-06 Score=86.20 Aligned_cols=136 Identities=19% Similarity=0.214 Sum_probs=94.4
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCC
Q 004120 214 ENIQRNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEG 291 (773)
Q Consensus 214 e~~~~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg 291 (773)
+++-+.+|.+++..+....+.+..++. ..-||+..|||||-.+. .+.+|...+.. .+.|+++++.|.|
T Consensus 27 ~riI~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~-------~~~~I~~~i~~---~~~~V~t~~~G~A 96 (203)
T 3qwd_A 27 DRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVT-------AGFAIYDTIQH---IKPDVQTICIGMA 96 (203)
T ss_dssp TTEEEECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HHHHHHHHHHH---SSSCEEEEEEEEE
T ss_pred CCEEEEcCEECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHH-------HHHHHHHHHHH---hcCCcEEEEeeee
Confidence 445566899999999998888877664 35799999999996532 12245555444 5789999999999
Q ss_pred ccchhhhccccc--eeeeecCCeeeeeCHHHH-----------HHHh-----------hhhccCch-HHHHH----hccc
Q 004120 292 GSGGALAIGCAN--KLLMLENAVFYVASPEAC-----------AAIL-----------WKSAKASP-KAAEK----LKIT 342 (773)
Q Consensus 292 ~GGGAlA~g~aD--~Vlm~e~A~~sVisPEga-----------AsIl-----------~rd~~~a~-eaAe~----lkit 342 (773)
.|+|++.++.|| .++|.|++.+.+-.|-+. +..+ -...-... +..+. .-+|
T Consensus 97 aSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lt 176 (203)
T 3qwd_A 97 ASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLT 176 (203)
T ss_dssp ETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCCEE
T ss_pred hhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCceec
Confidence 999999988888 699999999987544321 0000 00000111 11111 2368
Q ss_pred HHHHHHcCCceeeecCC
Q 004120 343 GSELCKLQIADGVIPEP 359 (773)
Q Consensus 343 A~dL~~lGiVD~IIpE~ 359 (773)
|++.++.|+||.|+...
T Consensus 177 a~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 177 AEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp HHHHHHHTSCSEECCCC
T ss_pred HHHHHHcCCcCEecCCc
Confidence 99999999999999654
No 103
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.30 E-value=7.8e-07 Score=88.25 Aligned_cols=130 Identities=18% Similarity=0.252 Sum_probs=90.7
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccch
Q 004120 218 RNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 295 (773)
Q Consensus 218 ~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGG 295 (773)
+..|.+++..+....+.+..++. ..-||+..|||||-.+. .+.+|...+.. .+.|+++++.|.|.|||
T Consensus 30 ~l~g~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~-------a~~~I~~~i~~---~~~pV~~~v~g~AaS~g 99 (193)
T 1yg6_A 30 FLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVIT-------AGMSIYDTMQF---IKPDVSTICMGQAASMG 99 (193)
T ss_dssp EEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HHHHHHHHHHH---SSSCEEEEEEEEEETHH
T ss_pred EEcCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHH-------HHHHHHHHHHh---cCCCEEEEEeeeHHHHH
Confidence 44577888888888888876543 45799999999995432 12345555554 56899999999999999
Q ss_pred hhhccccce--eeeecCCeeeeeCHHHH----H-HH--hh---------------hhccCch-HHHHHh----cccHHHH
Q 004120 296 ALAIGCANK--LLMLENAVFYVASPEAC----A-AI--LW---------------KSAKASP-KAAEKL----KITGSEL 346 (773)
Q Consensus 296 AlA~g~aD~--Vlm~e~A~~sVisPEga----A-sI--l~---------------rd~~~a~-eaAe~l----kitA~dL 346 (773)
+|.++.||. ++|.|++.+++..|-+. + .+ .. +...... +..+.+ -+|+++.
T Consensus 100 ~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA 179 (193)
T 1yg6_A 100 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 179 (193)
T ss_dssp HHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHH
T ss_pred HHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeEEcHHHH
Confidence 999999998 99999999888665421 0 00 00 0000111 122222 2589999
Q ss_pred HHcCCceeeec
Q 004120 347 CKLQIADGVIP 357 (773)
Q Consensus 347 ~~lGiVD~IIp 357 (773)
++.|+||.|+.
T Consensus 180 ~~~GliD~i~~ 190 (193)
T 1yg6_A 180 VEYGLVDSILT 190 (193)
T ss_dssp HHHTSSSEECC
T ss_pred HHcCCCCEecC
Confidence 99999999984
No 104
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=98.30 E-value=1.4e-05 Score=86.42 Aligned_cols=138 Identities=9% Similarity=0.049 Sum_probs=94.9
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-CCCC-CHhHHHh------c------hHHHHHHHHHHHhCCCCcEE
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-GAYA-DLKSEEL------G------QGEAIAHNLRTMFGLKVPII 284 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-GA~~-g~~AEe~------G------qa~aIAr~L~ams~l~VP~I 284 (773)
..+++++.++...+.++.++. -.+=+|.|.-.+ ++++ |.+.... + ......+.+..+..+++|+|
T Consensus 27 ~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 106 (363)
T 3bpt_A 27 LNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYV 106 (363)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTCSSCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 357899999999999876654 456677777655 3333 3222111 0 11122345667889999999
Q ss_pred EEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCcee
Q 004120 285 SIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADG 354 (773)
Q Consensus 285 SVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~ 354 (773)
+.|.|.+.|||.-....||++||.++++|+. +.|.+..+..+...... .+.+. ..++|.++++.|+||+
T Consensus 107 Aav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~a~~l~ltg~~i~A~eA~~~GLv~~ 185 (363)
T 3bpt_A 107 ALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAGIATH 185 (363)
T ss_dssp EEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-HHHHHHHHCCCEETHHHHHTTSCSE
T ss_pred EEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-HHHHHHHcCCCCCHHHHHHCCCcce
Confidence 9999999999988888899999999999876 34544444333222222 33332 3689999999999999
Q ss_pred eecC
Q 004120 355 VIPE 358 (773)
Q Consensus 355 IIpE 358 (773)
|+|.
T Consensus 186 vv~~ 189 (363)
T 3bpt_A 186 FVDS 189 (363)
T ss_dssp ECCG
T ss_pred ecCH
Confidence 9954
No 105
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=98.27 E-value=5.3e-07 Score=93.32 Aligned_cols=137 Identities=17% Similarity=0.160 Sum_probs=90.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCC-CHhHHHhc---------hHHHHHHHHHHHhCCCCcEEEEEc
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYA-DLKSEELG---------QGEAIAHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~-g~~AEe~G---------qa~aIAr~L~ams~l~VP~ISVVi 288 (773)
..+++++.++...+.++.++. -.+-+|.|.-.++++. |.+..+.. .... ...+..+..+++|+|+.|.
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~-~~~~~~l~~~~kPvIAav~ 106 (265)
T 3qxz_A 28 RNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFSA-SPVQPAAFELRTPVIAAVN 106 (265)
T ss_dssp TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCCS-CCSSSCGGGSSSCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHHH-HHHHHHHHhCCCCEEEEEC
Confidence 357999999999999987654 4566777765544332 21111100 0001 2334557778999999999
Q ss_pred CCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcCCceeeec
Q 004120 289 GEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 289 Geg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lGiVD~IIp 357 (773)
|.|.|||.-....||+++|.++++|+. +.|.+.....+........+.+. ..++|+++++.|+||+|+|
T Consensus 107 G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~ 185 (265)
T 3qxz_A 107 GHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLP 185 (265)
T ss_dssp SEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSEEEC
T ss_pred CEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeC
Confidence 999999999888999999999999885 33433333222211111222222 3689999999999999994
No 106
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=98.27 E-value=1.3e-05 Score=88.29 Aligned_cols=138 Identities=11% Similarity=0.031 Sum_probs=95.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCC-CCCC-CHhHHHh----------------chHHHHHHHHHHHhCCC
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTP-GAYA-DLKSEEL----------------GQGEAIAHNLRTMFGLK 280 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTp-GA~~-g~~AEe~----------------Gqa~aIAr~L~ams~l~ 280 (773)
..+++++.++...++++.++. -.+-+|.|.-.+ ++++ |.+.... .........+..+..++
T Consensus 63 ~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 142 (407)
T 3ju1_A 63 LNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDYLLHTYG 142 (407)
T ss_dssp TSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999987654 445667666655 2333 2211110 01112234566788999
Q ss_pred CcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH----hcccHHHHHHcC
Q 004120 281 VPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK----LKITGSELCKLQ 350 (773)
Q Consensus 281 VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~----lkitA~dL~~lG 350 (773)
+|+|+.|.|.+.|||.-....||++||.++++|+. +.|.+..+..+...-. ..+.+. ..++|.++++.|
T Consensus 143 kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g-~~A~~l~ltG~~i~A~eA~~~G 221 (407)
T 3ju1_A 143 KPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG-KMGLFLGLTAYHMNAADACYVG 221 (407)
T ss_dssp SCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST-THHHHHHHHCCCBCHHHHHHHT
T ss_pred CCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH-HHHHHHHHcCCcCcHHHHHHCC
Confidence 99999999999999998888899999999999876 4454444443333322 333332 378999999999
Q ss_pred CceeeecC
Q 004120 351 IADGVIPE 358 (773)
Q Consensus 351 iVD~IIpE 358 (773)
+||.|+|.
T Consensus 222 Lv~~vv~~ 229 (407)
T 3ju1_A 222 LADHYLNR 229 (407)
T ss_dssp SCSEECCG
T ss_pred CccEEcCH
Confidence 99999964
No 107
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=98.10 E-value=3.2e-06 Score=96.97 Aligned_cols=88 Identities=18% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHhhhc-C-CcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhcc
Q 004120 223 PTPHGYRKALRMMYYADHH-G-FPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIG 300 (773)
Q Consensus 223 ~~peg~rKA~R~m~lAekf-~-LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g 300 (773)
++...+....+.++.|... + .-||.-+|+||..+.. ...|.+.+..+...++|+|+.|-|.|.|||++..+
T Consensus 319 ~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~spGG~~~~-------~~~i~~~i~~l~~~~kPVia~v~g~AasgG~~iA~ 391 (593)
T 3bf0_A 319 QGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTA-------SEVIRAELAAARAAGKPVVVSMGGMAASGGYWIST 391 (593)
T ss_dssp TTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEEEECHHH-------HHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHTTT
T ss_pred cchhHHHHHHHHHHHHHhCCCCCEEEEEecCCCCCHHH-------HHHHHHHHHHHHhCCCCEEEEECCChHHHHHHHHH
Confidence 4566677777888777654 3 3577779999865431 23466777777778999999999999999999999
Q ss_pred ccceeeeecCCeeeeeC
Q 004120 301 CANKLLMLENAVFYVAS 317 (773)
Q Consensus 301 ~aD~Vlm~e~A~~sVis 317 (773)
.||+++|.|++.++.++
T Consensus 392 aaD~iva~p~a~~Gsig 408 (593)
T 3bf0_A 392 PANYIVANPSTLTGSIG 408 (593)
T ss_dssp TCSEEEECTTCEEECCC
T ss_pred hCCEEEECCCCEeecce
Confidence 99999999999887654
No 108
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.09 E-value=1.5e-05 Score=90.55 Aligned_cols=161 Identities=10% Similarity=0.051 Sum_probs=101.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhhc--CCcEEEEec-CCCCCC-CHhHHHh---------chHHHHHHHHHHH----hCCCCc
Q 004120 220 FGMPTPHGYRKALRMMYYADHH--GFPIVTFID-TPGAYA-DLKSEEL---------GQGEAIAHNLRTM----FGLKVP 282 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAekf--~LPIVtLID-TpGA~~-g~~AEe~---------Gqa~aIAr~L~am----s~l~VP 282 (773)
..+++++.+......++.++.. .+-+|.|.- .+++++ |.+.... .....+...+..+ ..+++|
T Consensus 52 ~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pKP 131 (556)
T 2w3p_A 52 LNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLK 131 (556)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3568899999888888766543 566777766 444443 2211111 1112334455666 788999
Q ss_pred EEEEEcCCCccchhhhccccceeeeecC--Ceeeee-------CHHHHHHHhhh--hccCchHHHHH----hcccHHHHH
Q 004120 283 IISIVIGEGGSGGALAIGCANKLLMLEN--AVFYVA-------SPEACAAILWK--SAKASPKAAEK----LKITGSELC 347 (773)
Q Consensus 283 ~ISVViGeg~GGGAlA~g~aD~Vlm~e~--A~~sVi-------sPEgaAsIl~r--d~~~a~eaAe~----lkitA~dL~ 347 (773)
+|+.|.|.|.|||......||+++|.++ +.|+.- .|.+....... .......+.+. ..+++++++
T Consensus 132 VIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl 211 (556)
T 2w3p_A 132 FLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAK 211 (556)
T ss_dssp EEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHH
T ss_pred EEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHH
Confidence 9999999999999998889999999999 887751 12222222222 22222233333 268999999
Q ss_pred HcCCceeeecCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 004120 348 KLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393 (773)
Q Consensus 348 ~lGiVD~IIpE~lGgAh~dP~~tr~~L~~aL~~~L~eL~~l~~~~l 393 (773)
+.|+||+|+| +++ +..........|...++..+
T Consensus 212 ~lGLVdeVVp---------~~e----L~~~A~~lA~~LA~~~p~Av 244 (556)
T 2w3p_A 212 AWRLVDEVVK---------PNQ----FDQAIQARALELAAQSDRPA 244 (556)
T ss_dssp HTTSCSEEEC---------HHH----HHHHHHHHHHHHHTTCCCCT
T ss_pred HCCCceEEeC---------hhH----HHHHHHHHHHHHHcCChHHH
Confidence 9999999993 333 33333334455666666554
No 109
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=98.00 E-value=9.2e-06 Score=83.04 Aligned_cols=82 Identities=21% Similarity=0.191 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhhh-cCC-cEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhC-CCCcEEEEEcCCCccchhhhccccce
Q 004120 228 YRKALRMMYYADH-HGF-PIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFG-LKVPIISIVIGEGGSGGALAIGCANK 304 (773)
Q Consensus 228 ~rKA~R~m~lAek-f~L-PIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~-l~VP~ISVViGeg~GGGAlA~g~aD~ 304 (773)
++...+.++.|.. -++ -||.-+|+||..+.. ...+.+.+..+.. .+.|+|+.|-|.|.|||++....||+
T Consensus 31 ~~~l~~~l~~a~~d~~v~~ivL~~~s~Gg~~~~-------~~~i~~~l~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~ 103 (240)
T 3rst_A 31 HRTFLKNLERAKDDKTVKGIVLKVNSPGGGVYE-------SAEIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADK 103 (240)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEECCBCHHH-------HHHHHHHHHHHHHHHCCCEEEEEEEEEETHHHHHHTTSSE
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEecCCCCCHHH-------HHHHHHHHHHHHHhCCCeEEEEECCeehHhHHHHHHhCCe
Confidence 4556666665543 333 355668998865432 2456777777776 78999999999999999999999999
Q ss_pred eeeecCCeeeee
Q 004120 305 LLMLENAVFYVA 316 (773)
Q Consensus 305 Vlm~e~A~~sVi 316 (773)
++|.|++.++..
T Consensus 104 i~a~~~a~~g~~ 115 (240)
T 3rst_A 104 IFATPETLTGSL 115 (240)
T ss_dssp EEECTTCEEECC
T ss_pred eEECCCCeEecc
Confidence 999999987765
No 110
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=97.99 E-value=5.8e-05 Score=88.41 Aligned_cols=136 Identities=13% Similarity=0.059 Sum_probs=92.0
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCC-CHhHHHh------c------hHHHHHHHHHHHhCCCCcEEE
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYA-DLKSEEL------G------QGEAIAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~-g~~AEe~------G------qa~aIAr~L~ams~l~VP~IS 285 (773)
.+++++.++...+.++.++. ..+-+|.|.- ++ +++ |.+..+. . ....+...+..+..+++|+|+
T Consensus 30 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 108 (715)
T 1wdk_A 30 NKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVA 108 (715)
T ss_dssp CBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 56899999999998876654 4566777765 43 333 3222111 0 112344556778889999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGV 355 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~I 355 (773)
.|.|.|.|||.-....||+++|.+++.|+. +.|.+.....+........+.+ ...++|+++++.|+||+|
T Consensus 109 av~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A~~l~ltG~~~~a~eA~~~GLv~~v 188 (715)
T 1wdk_A 109 AINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAV 188 (715)
T ss_dssp EECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEE
T ss_pred EECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCceEE
Confidence 999999999998888999999999999875 3333222222222222222322 237899999999999999
Q ss_pred ec
Q 004120 356 IP 357 (773)
Q Consensus 356 Ip 357 (773)
++
T Consensus 189 v~ 190 (715)
T 1wdk_A 189 VT 190 (715)
T ss_dssp EC
T ss_pred eC
Confidence 94
No 111
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.90 E-value=4e-05 Score=90.26 Aligned_cols=156 Identities=15% Similarity=0.128 Sum_probs=105.3
Q ss_pred EEEECCeEEEEEEeecCCCccccccccCCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCCCCCC-HhHHHh---chHH
Q 004120 193 IGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPGAYAD-LKSEEL---GQGE 267 (773)
Q Consensus 193 lArI~GrpV~VIa~dkg~~~~e~~~~ngG~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpGA~~g-~~AEe~---Gqa~ 267 (773)
+-+++|.-..|--|++. . .+++++........++.++. -.+-+|.|.-.+++++. .+..+. ....
T Consensus 24 ~~~~~~~Va~itlnrP~--------~--Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~ 93 (742)
T 3zwc_A 24 YLRLPHSLAMIRLCNPP--------V--NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGL 93 (742)
T ss_dssp EEECSTTEEEEEECCTT--------T--TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCS
T ss_pred EEEeeCCEEEEEeCCCc--------c--cCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhH
Confidence 34666654455455542 2 56899999999999987654 56777878776665542 211111 1122
Q ss_pred HHHHHHHHHhCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHHH---
Q 004120 268 AIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAEK--- 338 (773)
Q Consensus 268 aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe~--- 338 (773)
.+...+..+..+++|+|+.|.|.|.|||.-....||+++|.++|.|+. +-|.+.....+........|.+.
T Consensus 94 ~~~~~~~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~lt 173 (742)
T 3zwc_A 94 ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITS 173 (742)
T ss_dssp HHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHc
Confidence 455667778889999999999999999999888999999999999885 23333222222222222233332
Q ss_pred -hcccHHHHHHcCCceeeecC
Q 004120 339 -LKITGSELCKLQIADGVIPE 358 (773)
Q Consensus 339 -lkitA~dL~~lGiVD~IIpE 358 (773)
..++|+++++.|+||.|++.
T Consensus 174 G~~i~a~eA~~~GLv~~vv~~ 194 (742)
T 3zwc_A 174 GKYLSADEALRLGILDAVVKS 194 (742)
T ss_dssp CCCEEHHHHHHHTSCSEEESS
T ss_pred CCchhHHHHHHcCCccEecCc
Confidence 36899999999999999953
No 112
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=97.88 E-value=3.4e-05 Score=85.93 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=90.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhh-cCCcEEEEecC--------C-CCCC-CHhHHHhch----------HH---HHHHHHHH
Q 004120 220 FGMPTPHGYRKALRMMYYADH-HGFPIVTFIDT--------P-GAYA-DLKSEELGQ----------GE---AIAHNLRT 275 (773)
Q Consensus 220 gG~~~peg~rKA~R~m~lAek-f~LPIVtLIDT--------p-GA~~-g~~AEe~Gq----------a~---aIAr~L~a 275 (773)
..+++++.+......++.++. -.+-+|.|.-+ + ++++ |.+..+... .. .+...+..
T Consensus 188 ~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (440)
T 2np9_A 188 LNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRG 267 (440)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHHHHTHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcchhhhhhHHHHHHHHHHHHH
Confidence 357999999999999987654 46778877764 2 2443 433222100 00 12222333
Q ss_pred H------------hCCCCcEEEEEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH
Q 004120 276 M------------FGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE 337 (773)
Q Consensus 276 m------------s~l~VP~ISVViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe 337 (773)
+ ..+++|+|+.|.|.|+|||.-....||++||.++++|++ +.|.+... .+........+.+
T Consensus 268 l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~P~~g~~-~L~rlvG~~~A~e 346 (440)
T 2np9_A 268 VLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANL-RLGRFAGPRVSRQ 346 (440)
T ss_dssp EECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTHHH-HHHHHHHHHHHHH
T ss_pred HHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccCcCcchHHH-HHHHHhhHHHHHH
Confidence 2 257899999999999999999888999999999999876 44544332 2222212222223
Q ss_pred H----hcccHHHHHHcCCceeeec
Q 004120 338 K----LKITGSELCKLQIADGVIP 357 (773)
Q Consensus 338 ~----lkitA~dL~~lGiVD~IIp 357 (773)
. ..++|+++++.|+||+|++
T Consensus 347 llLtG~~i~A~EA~~~GLV~~Vvp 370 (440)
T 2np9_A 347 VILEGRRIWAKEPEARLLVDEVVE 370 (440)
T ss_dssp HHHHCCCEETTSGGGGGTCSEEEC
T ss_pred HHHcCCCCCHHHHHHCCCCcEecC
Confidence 2 3689999999999999993
No 113
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.82 E-value=2.9e-05 Score=78.56 Aligned_cols=145 Identities=12% Similarity=0.157 Sum_probs=91.9
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhh--cCCcEEEEecCCCCCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCC
Q 004120 213 KENIQRNFGMPTPHGYRKALRMMYYADH--HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGE 290 (773)
Q Consensus 213 ~e~~~~ngG~~~peg~rKA~R~m~lAek--f~LPIVtLIDTpGA~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGe 290 (773)
++++-+.+|.++++.+.....-+-+.+. ..-||..+|+|||-.-....+..|...+.......|...+.|+.++++|.
T Consensus 27 ~~Riifl~~~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~aglaIyd~m~~~~~~V~t~~~G~ 106 (205)
T 4gm2_A 27 SKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVINYISSDVYTYCLGK 106 (205)
T ss_dssp TTTEEEECSCCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred cCCEEEECCEEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 4566677899999988887776655443 36799999999992211111111222222223334444678999999999
Q ss_pred Cccchhhhccccc--eeeeecCCeeeeeCHHHHH-------------HHhh----------hhccCc-hHHHHH----hc
Q 004120 291 GGSGGALAIGCAN--KLLMLENAVFYVASPEACA-------------AILW----------KSAKAS-PKAAEK----LK 340 (773)
Q Consensus 291 g~GGGAlA~g~aD--~Vlm~e~A~~sVisPEgaA-------------sIl~----------rd~~~a-~eaAe~----lk 340 (773)
+.|.|++.++.++ ..+|+|||++.+=.|.+.+ .+.. +..-.. .+..+. .-
T Consensus 107 AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~m~rd~~ 186 (205)
T 4gm2_A 107 AYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKY 186 (205)
T ss_dssp EETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTTSCEE
T ss_pred ehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCcc
Confidence 9999999887777 5999999998875553211 1110 000000 111111 23
Q ss_pred ccHHHHHHcCCceeeec
Q 004120 341 ITGSELCKLQIADGVIP 357 (773)
Q Consensus 341 itA~dL~~lGiVD~IIp 357 (773)
++|++.++.|+||.|+.
T Consensus 187 msa~EA~eyGlID~V~~ 203 (205)
T 4gm2_A 187 FNADEAVDFKLIDHILE 203 (205)
T ss_dssp EEHHHHHHTTSCSEECC
T ss_pred cCHHHHHHcCCccEeec
Confidence 78999999999999993
No 114
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00013 Score=85.65 Aligned_cols=136 Identities=12% Similarity=0.033 Sum_probs=87.4
Q ss_pred CCCCHHHHHHHHHHHHHhhh-cCCcEEEEecCCC-CCC-CHhHHHh------------chHHHHHHHHHHHhCCCCcEEE
Q 004120 221 GMPTPHGYRKALRMMYYADH-HGFPIVTFIDTPG-AYA-DLKSEEL------------GQGEAIAHNLRTMFGLKVPIIS 285 (773)
Q Consensus 221 G~~~peg~rKA~R~m~lAek-f~LPIVtLIDTpG-A~~-g~~AEe~------------Gqa~aIAr~L~ams~l~VP~IS 285 (773)
.+++++.++.....++.++. ..+-+|.|.- ++ +++ |.+..+. .....+...+..+..+++|+|+
T Consensus 29 Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 107 (725)
T 2wtb_A 29 NSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLLEAARKPSVA 107 (725)
T ss_dssp TCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------CCSSSHHHHHCCCCCCCTSSSCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhhhHHHHHHHHHHHHHHHHhCcCcEEE
Confidence 46889999999998877654 3466666655 33 332 2221111 0111222233456678999999
Q ss_pred EEcCCCccchhhhccccceeeeecCCeeee------eCHHHHHHHhhhhccCchHHHH----HhcccHHHHHHcCCceee
Q 004120 286 IVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKASPKAAE----KLKITGSELCKLQIADGV 355 (773)
Q Consensus 286 VViGeg~GGGAlA~g~aD~Vlm~e~A~~sV------isPEgaAsIl~rd~~~a~eaAe----~lkitA~dL~~lGiVD~I 355 (773)
.|.|.|.|||.-....||+++|.+++.|+. +-|.+.....+........+.+ ...++|+++++.|+||+|
T Consensus 108 av~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~l~ltG~~~~a~eA~~~GLv~~v 187 (725)
T 2wtb_A 108 AIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAV 187 (725)
T ss_dssp EECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred EECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCccceE
Confidence 999999999988888899999999999875 2333222222222212222222 237899999999999999
Q ss_pred ec
Q 004120 356 IP 357 (773)
Q Consensus 356 Ip 357 (773)
++
T Consensus 188 v~ 189 (725)
T 2wtb_A 188 VP 189 (725)
T ss_dssp CC
T ss_pred cC
Confidence 95
No 115
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.23 E-value=0.00052 Score=78.84 Aligned_cols=85 Identities=13% Similarity=0.079 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHhhhc-C-CcEEEEecCCC-CCCCHhHHHhchHHHHHHHHHHHhCCCCcEEEEEcCCCccchhhhcccc
Q 004120 226 HGYRKALRMMYYADHH-G-FPIVTFIDTPG-AYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCA 302 (773)
Q Consensus 226 eg~rKA~R~m~lAekf-~-LPIVtLIDTpG-A~~g~~AEe~Gqa~aIAr~L~ams~l~VP~ISVViGeg~GGGAlA~g~a 302 (773)
..+....+.++.|..- + --|+.-||+|| ..+. .+.+|...+..+...++|+|+++ +.+.+||+|..+.|
T Consensus 70 ~~~~~i~~~L~~a~~d~~ik~I~L~inspGgG~v~-------~~~~I~~~i~~~k~~gkpvva~~-~~aas~~y~lAsaa 141 (593)
T 3bf0_A 70 NSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQP-------SMQYIGKALKEFRDSGKPVYAVG-ENYSQGQYYLASFA 141 (593)
T ss_dssp EEHHHHHHHHHHHHHCTTCCCEEEECTEEEECCHH-------HHHHHHHHHHHHHHTTCCEEEEE-SCEEHHHHHHHTTS
T ss_pred cCHHHHHHHHHHHHhCCCceEEEEEeCCCCCCcHH-------HHHHHHHHHHHHHhcCCeEEEEE-ccchhHHHHHHHhC
Confidence 4577888888777543 3 46889999998 4432 23568888888887789999975 44666777777789
Q ss_pred ceeeeecCCeeeeeCH
Q 004120 303 NKLLMLENAVFYVASP 318 (773)
Q Consensus 303 D~Vlm~e~A~~sVisP 318 (773)
|.++|.|++.++..+|
T Consensus 142 d~i~~~P~~~vg~~g~ 157 (593)
T 3bf0_A 142 NKIWLSPQGVVDLHGF 157 (593)
T ss_dssp SEEEECTTCCEECCCC
T ss_pred CEEEECCCceEEEecc
Confidence 9999999999887766
No 116
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=93.77 E-value=0.0037 Score=65.97 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=59.9
Q ss_pred cchHHHHHHhhhccCCCCC---CCCCCCCCCcccccc------ccccccCCCCCCCCCcccccccchHhHHHHHHHHHhh
Q 004120 46 GFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGVL------THLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKM 116 (773)
Q Consensus 46 ~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv~------~~l~~~~P~~~~~~~~~LdFEkPIvel~~ki~~l~~l 116 (773)
++++++++.++..++.||+ ++| ++||++ +|+++++| .+.+.|.+|.+ +
T Consensus 180 ~aki~~~l~~~s~~~vP~Isvv~g~------~~GG~~as~a~~~D~i~a~p------~A~i~~aGP~v-----------i 236 (285)
T 2f9i_B 180 MGKTSVSLKRHSDAGLLYISYLTHP------TTGGVSASFASVGDINLSEP------KALIGFAGRRV-----------I 236 (285)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEE------EEHHHHTTGGGCCSEEEECT------TCBEESSCHHH-----------H
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCC------ccHHHHHHhhhCCCEEEEeC------CcEEEEcCHHH-----------H
Confidence 5889999999999999999 888 999984 89999999 89999999999 5
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhhh
Q 004120 117 ANDTGLDFSDQIVSLENKYQQALKD 141 (773)
Q Consensus 117 a~~~giDlseEIq~LE~KleeL~kd 141 (773)
++..+.+++++++..+..++++..|
T Consensus 237 ~~~~~~~~~e~~~~Ae~~~~~G~iD 261 (285)
T 2f9i_B 237 EQTINEKLPDDFQTAEFLLEHGQLD 261 (285)
T ss_dssp HHHHTSCCCTTTTBHHHHHHTTCCS
T ss_pred HHHhcccchHhHhhHHHHHhcCCcc
Confidence 5555566677777777766665544
No 117
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=89.25 E-value=3.9 Score=42.78 Aligned_cols=13 Identities=23% Similarity=0.634 Sum_probs=6.5
Q ss_pred hhHHHHHHHHHHH
Q 004120 436 KLEDEVEKLKQQI 448 (773)
Q Consensus 436 ~~~~~~~~~~~~~ 448 (773)
.|..+++.|+.++
T Consensus 19 ~l~~~~eel~~~L 31 (273)
T 3s84_A 19 EIGKELEELRARL 31 (273)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3444555555554
No 118
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=71.94 E-value=25 Score=48.18 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 004120 606 KEKLVETKKEIESELIDGL 624 (773)
Q Consensus 606 keki~k~k~Ef~~~l~~~~ 624 (773)
.++|.+.|+|.+..|++|.
T Consensus 1989 ~~ei~~~k~~~e~dL~~A~ 2007 (3245)
T 3vkg_A 1989 NKEIAVQKVKAYADLEKAE 2007 (3245)
T ss_dssp HHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 3556667777777777764
No 119
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=71.47 E-value=3.5 Score=51.02 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=9.0
Q ss_pred hhHHHHHHHHHHHHHh
Q 004120 436 KLEDEVEKLKQQILKA 451 (773)
Q Consensus 436 ~~~~~~~~~~~~~~~~ 451 (773)
+++.|+++|++++...
T Consensus 861 ~L~~eL~el~~~L~~l 876 (1184)
T 1i84_S 861 AKDEELQRTKERQQKA 876 (1184)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555666666655444
No 120
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=66.45 E-value=25 Score=33.90 Aligned_cols=36 Identities=14% Similarity=0.430 Sum_probs=25.1
Q ss_pred chhhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhC
Q 004120 648 SNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAG 689 (773)
Q Consensus 648 ~~~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evakag 689 (773)
..++.+++.+-.+|++... .||.+|+.|+.++....
T Consensus 77 ~~~k~~le~l~~~i~~~a~------~ik~~Lk~l~~~~~~~~ 112 (180)
T 1s94_A 77 DQMKEELEELMTDIKRTAN------KVRGKLKTIELNIEQEE 112 (180)
T ss_dssp --CHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhhh
Confidence 3556667777777776665 36999999999887663
No 121
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=62.97 E-value=46 Score=41.07 Aligned_cols=6 Identities=17% Similarity=0.540 Sum_probs=2.9
Q ss_pred CcchHH
Q 004120 45 RGFAVS 50 (773)
Q Consensus 45 ~~~~v~ 50 (773)
|++.|=
T Consensus 257 RnfHIF 262 (1080)
T 2dfs_A 257 RNYHIF 262 (1080)
T ss_dssp CSBHHH
T ss_pred CcchhH
Confidence 455544
No 122
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=62.20 E-value=88 Score=35.78 Aligned_cols=35 Identities=17% Similarity=0.404 Sum_probs=21.9
Q ss_pred hhhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 004120 649 NFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIA 686 (773)
Q Consensus 649 ~~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Eva 686 (773)
+|+.++..|+++|+..|..+ .-|+.-|+.+..||.
T Consensus 114 ELRRrIqyLKekVdnQlsnI---rvLQsnLedq~~kIQ 148 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHI---QLLQKNVRAQLVDMK 148 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 67788888888888888544 334444444444333
No 123
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=61.43 E-value=17 Score=44.95 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=13.2
Q ss_pred hhhhHHHHHHHHHHHHHhhh
Q 004120 434 KEKLEDEVEKLKQQILKAKE 453 (773)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~ 453 (773)
....+.|+++|++++.+.+.
T Consensus 852 ~a~~~~El~~L~~eL~el~~ 871 (1184)
T 1i84_S 852 VTRQEEEMQAKDEELQRTKE 871 (1184)
T ss_dssp CCTHHHHCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 34556688888887766553
No 124
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=60.81 E-value=78 Score=43.54 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHhCCh
Q 004120 699 KIQALEQQIKQRLSEAVNSS 718 (773)
Q Consensus 699 KIe~l~~~I~~~ie~a~~ss 718 (773)
.++.|++++..=+-+++=++
T Consensus 2092 ~~~~l~~~~~~L~GD~LLaa 2111 (3245)
T 3vkg_A 2092 QSENFNTQMSTVVGDVVLAS 2111 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHH
Confidence 36667776666555554444
No 125
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=59.70 E-value=28 Score=39.72 Aligned_cols=52 Identities=19% Similarity=0.353 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhhcCcchHHhhhHHHHhhhccccchhhhhHHHHHHHHHHHHHH
Q 004120 599 SDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIED 667 (773)
Q Consensus 599 ~~l~~~Lkeki~k~k~Ef~~~l~~~~~sl~~~~~~l~sk~k~~~~~~~~~~~~~k~~~l~~ei~kkie~ 667 (773)
..+..+|..+|.-||.+++..+ .-+..|..-|+ +...||.+|.-.|.-||+.
T Consensus 109 nE~S~ELRRrIqyLKekVdnQl-snIrvLQsnLe----------------dq~~kIQRLEvDIdiqirs 160 (562)
T 3ghg_A 109 NRVSEDLRSRIEVLKRKVIEKV-QHIQLLQKNVR----------------AQLVDMKRLEVDIDIKIRS 160 (562)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHh
Confidence 3456788888888888888777 33344433333 3334677777777777764
No 126
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=53.22 E-value=1.4 Score=46.89 Aligned_cols=48 Identities=33% Similarity=0.529 Sum_probs=41.4
Q ss_pred CcchHHHHHHhhhccCCCCC---CCCCCCCCCccccc------cccccccCCCCCCCCCcccccccchH
Q 004120 45 RGFAVSAKLRKVKKHDYPWP---KDPKDVDPNVKGGV------LTHLSHFKPLKEKPKPVTLDFEKPLV 104 (773)
Q Consensus 45 ~~~~v~~~~~~~k~~~~p~~---~~p~~~~~~~~gGv------~~~l~~~~P~~~~~~~~~LdFEkPIv 104 (773)
.+.+++.++.++..++.|++ +.| ++||+ ++|+.++.| .+.+.|-+|.+
T Consensus 176 ~~~~i~~al~~~~~~~vP~IavV~G~------~~GGg~a~~a~~~D~via~~------~A~i~v~Gp~~ 232 (304)
T 2f9y_B 176 QMAKTSAALAKMQERGLPYISVLTDP------TMGGVSASFAMLGDLNIAEP------KALIGFAGPRV 232 (304)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEE------EEHHHHTTGGGCCSEEEECT------TCBEESSCHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECC------CccHHHHHHHhcCCEEEEeC------CcEEEeecHHH
Confidence 35788889988899999999 677 99988 289999999 88899999987
No 127
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=51.01 E-value=26 Score=34.12 Aligned_cols=30 Identities=30% Similarity=0.510 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhhc
Q 004120 558 KAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDS 593 (773)
Q Consensus 558 ~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ka 593 (773)
..+.|++.+++.+.+ ++.|++-...|+..-
T Consensus 79 ~~~~Lr~~l~kdlee------~r~~l~P~~~e~~~~ 108 (185)
T 3r2p_A 79 ETEGLRQEMSKDLEE------VKAKVQPYLDDFQKK 108 (185)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHH------HHHHHHHHHHHHHHH
Confidence 345588888888874 777777777766643
No 128
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=50.10 E-value=2.2e+02 Score=28.87 Aligned_cols=13 Identities=8% Similarity=-0.069 Sum_probs=9.7
Q ss_pred hhhHHHHHHHHHH
Q 004120 718 SELKEKHEELMAE 730 (773)
Q Consensus 718 s~lk~k~E~Lk~e 730 (773)
++|-..|+.++.-
T Consensus 175 ~~lL~~Yerir~~ 187 (256)
T 3na7_A 175 PKIYSFYERIRRW 187 (256)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4588888888763
No 129
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=47.36 E-value=1.1e+02 Score=37.81 Aligned_cols=14 Identities=14% Similarity=0.225 Sum_probs=10.1
Q ss_pred CcEEEEecCCCCCC
Q 004120 243 FPIVTFIDTPGAYA 256 (773)
Q Consensus 243 LPIVtLIDTpGA~~ 256 (773)
...|.++|.+||-.
T Consensus 430 ~~~IgvLDI~GFE~ 443 (1080)
T 2dfs_A 430 HSFIGVLDIYGFET 443 (1080)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CceEEeeccCCccc
Confidence 44788888888765
No 130
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=46.91 E-value=9.9 Score=43.15 Aligned_cols=90 Identities=22% Similarity=0.303 Sum_probs=47.7
Q ss_pred eEEEEEEe-ecCCCc-cccccccCCCCCHHHHHHH--------HHHHHHhhhcCCc-------------EEEEecCCC-C
Q 004120 199 RTYMFMGH-QKGRNT-KENIQRNFGMPTPHGYRKA--------LRMMYYADHHGFP-------------IVTFIDTPG-A 254 (773)
Q Consensus 199 rpV~VIa~-dkg~~~-~e~~~~ngG~~~peg~rKA--------~R~m~lAekf~LP-------------IVtLIDTpG-A 254 (773)
|.++|||| |.|++| -|++-+..|.+...|--.. .-.|.+-.+.|+- .|.|||||| +
T Consensus 32 RNiaIiaHvdaGKTTLtE~lL~~tG~i~~~G~V~~~~~~~~~~~D~~~~EreRGITI~s~~~~~~~~~~~iNlIDTPGHv 111 (548)
T 3vqt_A 32 RTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTTSVMQFPYRDRVVNLLDTPGHQ 111 (548)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTTCHHHHHHHHHC--------------------CTTTEEEEEETTEEEEEECCCCGG
T ss_pred ceEEEEeCCCCCHHHHHHHHHHhcCcccccceeecCccccccccCChHHHHHCCCcEeeceEEEEECCEEEEEEeCCCcH
Confidence 68999999 445433 2666666777655443221 2223333344433 499999999 5
Q ss_pred CCCHhHHHh---------------chHHHHHHHHHHHhCCCCcEEEEEc
Q 004120 255 YADLKSEEL---------------GQGEAIAHNLRTMFGLKVPIISIVI 288 (773)
Q Consensus 255 ~~g~~AEe~---------------Gqa~aIAr~L~ams~l~VP~ISVVi 288 (773)
..+.+.+.. |.....-..+..+...++|.|.+|.
T Consensus 112 DF~~Ev~raL~~~DgAvlVvda~~GV~~qT~~v~~~a~~~~lp~i~fIN 160 (548)
T 3vqt_A 112 DFSEDTYRVLTAVDSALVVIDAAKGVEAQTRKLMDVCRMRATPVMTFVN 160 (548)
T ss_dssp GCSHHHHHHHHSCSEEEEEEETTTBSCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHhcCceEEEeecCCCcccccHHHHHHHHHhCCceEEEEe
Confidence 555555531 2222333444555667899998885
No 131
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=45.79 E-value=1.4e+02 Score=28.83 Aligned_cols=67 Identities=12% Similarity=0.241 Sum_probs=39.0
Q ss_pred HHHHHH-HHHHHHhHHhhcCcchHHHHHHHHHHHhhcCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 004120 558 KAAKLK-QEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLD 630 (773)
Q Consensus 558 ~~~~Lk-~Ei~~~~~ea~~~~~lkek~~~lk~E~~ka~~s~~~~l~~~Lkeki~k~k~Ef~~~l~~~~~sl~~~ 630 (773)
.++.|+ .++.++++ .-|++.|+.+..-+... -..-.++..++++++.+=-.++...|..-+..+..+
T Consensus 47 ~v~ql~~sel~qel~-----~~l~~~ld~l~~~~~~l-~~~L~P~t~el~~~l~~~~e~Lr~~L~~d~EelR~~ 114 (165)
T 1gs9_A 47 VQEELLSSQVTQELR-----ALMDETMKELKAYKSEL-EEQLTPVAEETRARLSKELQAAQARLGADMEDVRGR 114 (165)
T ss_dssp HHHHHHSSHHHHHHH-----HHHHHHHHHHHHHHHHH-TTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHH-----HHHHHHHHHHHHHHHHH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 45555555 35667777776666655 456778878877777765555555554444444333
No 132
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=45.45 E-value=87 Score=34.43 Aligned_cols=18 Identities=22% Similarity=0.571 Sum_probs=11.2
Q ss_pred hhhhhHHHHHHHHHHHHH
Q 004120 649 NFRSKMENLNEEINKKIE 666 (773)
Q Consensus 649 ~~~~k~~~l~~ei~kkie 666 (773)
++..+++-|++-|+..|.
T Consensus 117 eLe~~i~~lk~~V~~q~~ 134 (390)
T 1deq_A 117 DLRSRIEILRRKVIEQVQ 134 (390)
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 555666666666666665
No 133
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=44.17 E-value=1.7e+02 Score=25.97 Aligned_cols=37 Identities=14% Similarity=0.300 Sum_probs=24.8
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhh
Q 004120 646 SFSNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKA 688 (773)
Q Consensus 646 ~~~~~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evaka 688 (773)
+....+.+++.+-.+|++... .||.+++.|+.++...
T Consensus 44 ~~~~~~~~l~~l~~~i~~~a~------~ik~~Lk~l~~~~~~~ 80 (127)
T 1ez3_A 44 PDEKTKEELEELMSDIKKTAN------KVRSKLKSIEQSIEQE 80 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHh
Confidence 333455566666666666655 3699999999888754
No 134
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=42.61 E-value=1.2e+02 Score=29.03 Aligned_cols=59 Identities=15% Similarity=0.304 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhhcCCCC-C-------CCCChHHHHHHHHHHHHHHH
Q 004120 554 DSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASS-F-------SDLEDDLKEKLVETKKEIES 618 (773)
Q Consensus 554 ~~~~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ka~~s~-~-------~~l~~~Lkeki~k~k~Ef~~ 618 (773)
.....++.|-.+|++.+. .++.+|..|+.++....... . ...+..|..++..++.+|+.
T Consensus 78 ~~k~~le~l~~~i~~~a~------~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~~~m~~yq~ 144 (180)
T 1s94_A 78 QMKEELEELMTDIKRTAN------KVRGKLKTIELNIEQEEHSNKSSADLRIRKTQYSTISRKFVEVMSDYNT 144 (180)
T ss_dssp -CHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777777777776 68999999998887653211 1 11345667777777777763
No 135
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=42.12 E-value=19 Score=32.54 Aligned_cols=58 Identities=22% Similarity=0.443 Sum_probs=38.4
Q ss_pred HHHHHHHHHhhcCcchHHhhhHHHHhhhccccchhhhhHHHHHHHHHHHHHHhhccch-hHHHHHHHHHHHH
Q 004120 616 IESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSD-LKDMIELLKLEIA 686 (773)
Q Consensus 616 f~~~l~~~~~sl~~~~~~l~sk~k~~~~~~~~~~~~~k~~~l~~ei~kkie~~~~~~~-ik~kiE~LK~Eva 686 (773)
+.++|+.+|..|...|+.+. . ++..++..|.+||++ +|.+.+.+. ||+|---|-.|+.
T Consensus 30 VQqELs~tfarLc~~Vd~t~---~---------eL~~EI~~L~~eI~~-LE~iqs~aK~LRnKA~~L~~eLe 88 (96)
T 1t3j_A 30 VQQEMATTFARLCQQVDMTQ---K---------HLEEEIARLSKEIDQ-LEKMQNNSKLLRNKAVQLESELE 88 (96)
T ss_dssp -----CCHHHHHHHHHHHHH---H---------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---H---------HHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHH
Confidence 56678888888888888776 2 334467778888865 787777776 7887777766665
No 136
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=42.12 E-value=25 Score=28.33 Aligned_cols=25 Identities=44% Similarity=0.530 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHH
Q 004120 676 DMIELLKLEIAKAGKKPDVKSKCKIQALEQQIK 708 (773)
Q Consensus 676 ~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~ 708 (773)
.-+|+||.|.+ +++.||+.|.+++.
T Consensus 19 ~d~eaLk~E~~--------eLk~k~~~L~~~~~ 43 (53)
T 2yy0_A 19 PEIELLRLELA--------EMKEKYEAIVEENK 43 (53)
T ss_dssp HHHHHHHHHHH--------HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHH--------HHHHHHHHHHHHHH
Confidence 44566666665 55666666655543
No 137
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=41.31 E-value=58 Score=26.57 Aligned_cols=12 Identities=42% Similarity=0.612 Sum_probs=5.9
Q ss_pred HHHHHHHHhhcc
Q 004120 660 EINKKIEDVINS 671 (773)
Q Consensus 660 ei~kkie~~~~~ 671 (773)
|+.|+|+++=.-
T Consensus 36 elkkkieelggg 47 (67)
T 1lq7_A 36 ELKKKIEELGGG 47 (67)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHhCCC
Confidence 445555554333
No 138
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=41.04 E-value=3.3e+02 Score=28.27 Aligned_cols=70 Identities=11% Similarity=0.239 Sum_probs=34.9
Q ss_pred hhHHHHHHHHHHHHhhCCC-CChhhHHHHHHHHHHHHHHHHHHhCC-----hhhHHHHHHHHHHH-hhccCCCCCCCC
Q 004120 673 DLKDMIELLKLEIAKAGKK-PDVKSKCKIQALEQQIKQRLSEAVNS-----SELKEKHEELMAEI-SDATKSPGGLDG 743 (773)
Q Consensus 673 ~ik~kiE~LK~Evakag~~-p~~~~k~KIe~l~~~I~~~ie~a~~s-----s~lk~k~E~Lk~e~-a~a~~~~~~~~~ 743 (773)
+|+.+++..=.++. +... --.+.+.+++.+.++|.+.+++.=.. -+++..+..+..++ .+=|..+....|
T Consensus 180 eLr~~L~p~ae~lr-~~l~~~~e~l~~~l~~~~~~~~qq~e~f~~~~~p~~e~~~~~l~~~~e~l~~~l~~~~~~~~~ 256 (273)
T 3s84_A 180 ELRQRLAPLAEDVR-GNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQMEQLRQKLGPHAGDVEG 256 (273)
T ss_dssp HHHHHHHHHHHHHH-HTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCC------
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHhCcchhhHHh
Confidence 35555544433332 2222 24466889999999999999876322 22444444444444 333444444444
No 139
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=38.93 E-value=1.7e+02 Score=29.59 Aligned_cols=160 Identities=12% Similarity=0.167 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhccCCCCChhhHHHHHHHhhhhccccccchhHHHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHh
Q 004120 512 LMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQ 591 (773)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~n~~~Lk~ki~~~ke~s~~~~~~~~~~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ 591 (773)
++.+|.+-.+++..+| ..+++.+++++.-.-+--+.. .++.++.|++.+.--..+...+. ...++.|+.
T Consensus 71 ~~~~l~~~~~~lr~~l--~kd~ee~r~~l~Py~~el~~~----~~~~~eelr~~L~P~~eel~~~~--~~~~eel~~--- 139 (243)
T 2a01_A 71 FWDNLEKETEGLRQEM--SKDLEEVKAKVQPYLDDFQKK----WQEEMELYRQKVEPLRAELQEGA--RQKLHELQE--- 139 (243)
T ss_dssp HHHHHHHHHHHHHHTS--SCCSSCSSTTHHHHHHHHHHH----HHHHHHHHHTTHHHHHHHHHHHH--HHHHHHHCC---
T ss_pred HHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHH--HhhHHHHHH---
Q ss_pred hcCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCcchHHhhhHHHHhhhccccchhhhhHHHHHHHHHHHHHHhhcc
Q 004120 592 DSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINS 671 (773)
Q Consensus 592 ka~~s~~~~l~~~Lkeki~k~k~Ef~~~l~~~~~sl~~~~~~l~sk~k~~~~~~~~~~~~~k~~~l~~ei~kkie~~~~~ 671 (773)
.-.+...+|++|+..--+|+...|.--...+.-++..--..++.... .-..+++.|+...=+++..++.-.+.+
T Consensus 140 -----~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~-p~~~e~~~kl~~~~e~lr~~l~p~~e~ 213 (243)
T 2a01_A 140 -----KLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGG-ARLAEYHAKATEHLSTLSEKAKPALED 213 (243)
T ss_dssp -----SCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHhHHHHHH
Q ss_pred c---------hhHHHHHHHHHHHHhh
Q 004120 672 S---------DLKDMIELLKLEIAKA 688 (773)
Q Consensus 672 ~---------~ik~kiE~LK~Evaka 688 (773)
= +|+.++..+=.++.++
T Consensus 214 lk~~l~p~~e~~~~~l~~~~e~~~~~ 239 (243)
T 2a01_A 214 LRQGLLPVLESFKVSFLSALEEYTKK 239 (243)
T ss_dssp SSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHh
No 140
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=37.96 E-value=32 Score=27.07 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhhc
Q 004120 557 NKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDS 593 (773)
Q Consensus 557 ~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ka 593 (773)
...+++||||=.|+.-=+..+. .|=++|+|.|+.+.
T Consensus 7 ~dle~~KqEIL~E~RkElqK~K-~EIIeAi~~El~~~ 42 (45)
T 1use_A 7 SDLQRVKQELLEEVKKELQKVK-EEIIEAFVQELRKR 42 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhc
Confidence 3355677766665542222111 24456666666665
No 141
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=36.23 E-value=2.7e+02 Score=27.38 Aligned_cols=53 Identities=8% Similarity=0.189 Sum_probs=30.0
Q ss_pred hhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHH
Q 004120 650 FRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIK 708 (773)
Q Consensus 650 ~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~ 708 (773)
+...++.+++.+++.++++ |.+++-.-.|+..-=..--.+++.++.-.-++.+
T Consensus 93 l~~~~e~lr~~l~kdlEel------r~kL~P~~eEL~~~l~~~~Eelr~~L~Py~eelr 145 (191)
T 1nfn_A 93 LSKELQAAQARLGADMEDV------CGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLR 145 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH------HHHhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 4456778888888888855 5566555555543333334455666433333333
No 142
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=35.74 E-value=1.2e+02 Score=33.47 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=16.0
Q ss_pred hhhHHHHHHHHHHHHHHhhc--------cchhHHHHHHHHHHH
Q 004120 651 RSKMENLNEEINKKIEDVIN--------SSDLKDMIELLKLEI 685 (773)
Q Consensus 651 ~~k~~~l~~ei~kkie~~~~--------~~~ik~kiE~LK~Ev 685 (773)
..-+..+.+-+.+++..+-+ +.+|..+|+-||.=|
T Consensus 87 ~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V 129 (390)
T 1deq_A 87 NTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKV 129 (390)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444443333 334555555555533
No 143
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=33.61 E-value=2.1e+02 Score=27.68 Aligned_cols=54 Identities=9% Similarity=0.246 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHH
Q 004120 651 RSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQR 710 (773)
Q Consensus 651 ~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~~~ 710 (773)
....+.|++.+.+.++++ |.+++-.-.|+..-=..--.+++.|++-+-++++.+
T Consensus 94 ~~~~e~Lr~~L~~d~Eel------R~~l~p~~~el~~~l~~~~EelR~kl~P~~eeL~~~ 147 (165)
T 1gs9_A 94 SKELQAAQARLGADMEDV------RGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKR 147 (165)
T ss_dssp HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778999999988866 666665555554333333445566655444444433
No 144
>3pev_B Nucleoporin GLE1; RECA, heat, DEAD-BOX, ATPase, helicase, mRNA export, nuclear hydrolase; HET: IHP; 2.50A {Saccharomyces cerevisiae} PDB: 3peu_B* 3pex_B* 3pez_B* 3rrm_B* 3rrn_B*
Probab=33.06 E-value=28 Score=36.86 Aligned_cols=58 Identities=28% Similarity=0.350 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHHHhCChh-hHHHHHHHHHHH
Q 004120 674 LKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSE-LKEKHEELMAEI 731 (773)
Q Consensus 674 ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~~~ie~a~~ss~-lk~k~E~Lk~e~ 731 (773)
-+.+|+.+|.+|..--..+|+++|+..-.++.+|+.+|-.+-||.+ +.+...+|..=+
T Consensus 15 y~~~i~~ik~~v~~~~~~~n~~lK~~~~~~kR~I~~~igQLt~s~~qi~~i~~~L~~ll 73 (297)
T 3pev_B 15 YKDKIAQIKQDIVLPIKKADVNVRNLLSRHKRKINPKFGQLTNSNQQLFKIQNELTQLI 73 (297)
T ss_dssp HHHHHHHHHHHTHHHHHHSCHHHHHHHHHHHHHHTTHHHHCCSBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCCHHHHHHHHHHhhhccchhccccCCHHHHHHHHHHHHHHH
Confidence 4677777777776555567888888888888888888888877755 666666665433
No 145
>2lem_A Apolipoprotein A-I; lipid transport; NMR {Mus musculus}
Probab=32.32 E-value=28 Score=34.78 Aligned_cols=161 Identities=14% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHHhhccCC-----CCChhhHHHHHHHhhhhccccccchhHHHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhh
Q 004120 518 ELKNEFNQGLAS-----APNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQD 592 (773)
Q Consensus 518 ~~~~~~~~~~~~-----~~n~~~Lk~ki~~~ke~s~~~~~~~~~~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~k 592 (773)
+|-+++|..|+. ..+...|+.+|.-.-+-.... +....+.|++.+++.+. +++.+++-..+|+..
T Consensus 36 el~qqL~~~l~e~~~~l~~~~~~l~~~l~p~~~e~~~~----l~~~~~~lr~~l~kd~e------e~r~~l~py~~el~~ 105 (216)
T 2lem_A 36 SLGQQLNLNLLENWDTLGSTVSQLQERLGPLTRDFWDN----LEKETDWVRQEMNKDLE------EVKQKVQPYLDEFQK 105 (216)
T ss_dssp HHHHHHHHHHHHTTTTCCCCCSSHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH------HHHHHTTTTCCHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH----HhHHHHHHHHHHhccHH------HHHHhhhHHHHHHHH
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCcchHHhhhHHHHhhhccccchhhhhHHHHHHHHHHHHHHhhccc
Q 004120 593 SGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSS 672 (773)
Q Consensus 593 a~~s~~~~l~~~Lkeki~k~k~Ef~~~l~~~~~sl~~~~~~l~sk~k~~~~~~~~~~~~~k~~~l~~ei~kkie~~~~~~ 672 (773)
- +.+.++.++..+.--....-.++.-+++-|+.++.-..+ +++.+++.-=+++...+. |
T Consensus 106 ~-----------~~~~~e~lr~~L~Py~~el~~~~~~~~e~Lr~~L~p~~e-----~lr~kl~~~~e~lk~~l~-----P 164 (216)
T 2lem_A 106 K-----------WKEDVELYRQKASPQGAELQESARQKLQELQGRLSPVAE-----EFRDRMRTHVDSLRTQLA-----P 164 (216)
T ss_dssp H-----------HHHHHHHHHHHTSCHHHHHHHHHHCSCCSSCCSCSTHHH-----HHHHHHHHHHHHHHHHHH-----H
T ss_pred H-----------HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhH-----h
Q ss_pred ---hhHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHH
Q 004120 673 ---DLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRL 711 (773)
Q Consensus 673 ---~ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~~~i 711 (773)
+++.+++.-=.|+... +--.+++.||...-+++++++
T Consensus 165 ~~ee~~~kl~~~leeL~~~--p~~~e~~~ki~~~~e~Lr~~l 204 (216)
T 2lem_A 165 HSEQMRESLAQRLAELKSN--PTLNEYHSSAKSHLKSLGEKA 204 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CCCCCCCCCSSSHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHHHhCC--cchHHHHHHHHHHHHHHHHHh
No 146
>4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} PDB: 4g0h_A
Probab=32.16 E-value=1.1e+02 Score=35.18 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004120 653 KMENLNEEINKKIEDVINSSDLKDMIELLKLEI 685 (773)
Q Consensus 653 k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Ev 685 (773)
|+++-...+..-|+++.=.+++..|||-|-.=+
T Consensus 719 Kv~etlk~L~~SvKDlgINqEv~dKIDNLNQAl 751 (876)
T 4dvy_P 719 KAEETLKALKGSVKDLGINPEWISKVENLNAAL 751 (876)
T ss_dssp --CCHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHhccCHHHHHHHHHHHHHH
Confidence 455555556666666666777777777666533
No 147
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=31.95 E-value=1.8e+02 Score=28.64 Aligned_cols=14 Identities=21% Similarity=0.392 Sum_probs=7.2
Q ss_pred HHHHHHHHhHHhhc
Q 004120 562 LKQEINKKFEEVIC 575 (773)
Q Consensus 562 Lk~Ei~~~~~ea~~ 575 (773)
|-+|++..+++.++
T Consensus 56 l~~el~~l~~e~~~ 69 (191)
T 1nfn_A 56 VTQELRALMDETMK 69 (191)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555555443
No 148
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=30.73 E-value=2.8e+02 Score=26.07 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=13.0
Q ss_pred HHHHHHHhCChhhHHHHHHHHHHH
Q 004120 708 KQRLSEAVNSSELKEKHEELMAEI 731 (773)
Q Consensus 708 ~~~ie~a~~ss~lk~k~E~Lk~e~ 731 (773)
.+.|+.| |..+.++..|..|+
T Consensus 134 ek~ls~A---s~~~~k~~~~e~~~ 154 (155)
T 2oto_A 134 ELAIDQA---SQDYNRANVLEKEL 154 (155)
T ss_dssp HHHHHHH---HHHHHHHHHHHHC-
T ss_pred HHHHHHH---HHHHHHHHHHhhhc
Confidence 3455555 77777777776654
No 149
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=28.90 E-value=3.1e+02 Score=24.31 Aligned_cols=72 Identities=21% Similarity=0.360 Sum_probs=44.9
Q ss_pred chhhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Q 004120 648 SNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEEL 727 (773)
Q Consensus 648 ~~~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~~~ie~a~~ss~lk~k~E~L 727 (773)
+.|-.+++.++.+|++ |...+ +.|..|-.++-. ...++...+..++.+..+|++... .||.+++.|
T Consensus 8 ~~F~~~v~~I~~~i~~-i~~~v------~~l~~~~~~~L~-~~~~~~~~~~~l~~l~~~i~~~a~------~ik~~Lk~l 73 (127)
T 1ez3_A 8 DEFFEQVEEIRGFIDK-IAENV------EEVKRKHSAILA-SPNPDEKTKEELEELMSDIKKTAN------KVRSKLKSI 73 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHH------HHHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHH------HHHHHHHHHHHh-cCCccHHHHHHHHHHHHHHHHHHH------HHHHHHHHH
Confidence 3466677777777654 32222 122333333322 234577778889999999887654 368999999
Q ss_pred HHHHhh
Q 004120 728 MAEISD 733 (773)
Q Consensus 728 k~e~a~ 733 (773)
+.++.+
T Consensus 74 ~~~~~~ 79 (127)
T 1ez3_A 74 EQSIEQ 79 (127)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888854
No 150
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=28.83 E-value=2.6e+02 Score=31.03 Aligned_cols=12 Identities=17% Similarity=0.155 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 004120 675 KDMIELLKLEIA 686 (773)
Q Consensus 675 k~kiE~LK~Eva 686 (773)
|.+++.||.|++
T Consensus 557 ~~~~~~l~~e~~ 568 (597)
T 3oja_B 557 RAKQAELRQETS 568 (597)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 334444444443
No 151
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=26.88 E-value=1.7e+02 Score=27.95 Aligned_cols=55 Identities=11% Similarity=0.157 Sum_probs=32.2
Q ss_pred chhhhhHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhCCCCChh----hHHHHHHHHHHHHHHHH
Q 004120 648 SNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVK----SKCKIQALEQQIKQRLS 712 (773)
Q Consensus 648 ~~~~~k~~~l~~ei~kkie~~~~~~~ik~kiE~LK~Evakag~~p~~~----~k~KIe~l~~~I~~~ie 712 (773)
+.|-..++++...|.+ |+.++..|+.-..+...+|+.. .+.+|+.+.++|++...
T Consensus 5 ~~f~~~~~~i~~~i~~----------i~~~v~~L~~l~~~~l~~~~~~~~~~~~~~i~~l~~~i~~~~~ 63 (196)
T 1fio_A 5 VGFMNKISQINRDLDK----------YDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQF 63 (196)
T ss_dssp HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555432 4555666666556666666543 56777777777766543
No 152
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=26.12 E-value=77 Score=29.62 Aligned_cols=48 Identities=21% Similarity=0.328 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhhcCCCCCCCCChHHHHHHHHHHHHHH
Q 004120 560 AKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIE 617 (773)
Q Consensus 560 ~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ka~~s~~~~l~~~Lkeki~k~k~Ef~ 617 (773)
+.+|+||.+ |.+||++++--...+....++++--.+.+.|+++.+|++
T Consensus 6 e~~K~Eiq~----------L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~ 53 (123)
T 2lf0_A 6 EVEKNEIKR----------LSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIA 53 (123)
T ss_dssp CSHHHHHHH----------HHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 457777753 778999999999999888888888888888888888866
No 153
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=25.51 E-value=5.3e+02 Score=25.97 Aligned_cols=9 Identities=11% Similarity=0.036 Sum_probs=3.5
Q ss_pred hhHHHHHHH
Q 004120 652 SKMENLNEE 660 (773)
Q Consensus 652 ~k~~~l~~e 660 (773)
.+++.++.+
T Consensus 97 kEie~~~~~ 105 (256)
T 3na7_A 97 IEEDIAKER 105 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334433333
No 154
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.75 E-value=66 Score=25.35 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=5.6
Q ss_pred HHHHHHHhccCC
Q 004120 491 FATLRAEFSKGN 502 (773)
Q Consensus 491 ~~~~~~~~~~~~ 502 (773)
+..+|.||++.+
T Consensus 32 IeAi~~El~~~~ 43 (45)
T 1use_A 32 IEAFVQELRKRG 43 (45)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcC
Confidence 344555555543
No 155
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=23.96 E-value=1.6e+02 Score=27.73 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHhHHhhcC
Q 004120 556 KNKAAKLKQEINKKFEEVICR 576 (773)
Q Consensus 556 ~~~~~~Lk~Ei~~~~~ea~~~ 576 (773)
.+.+.++-+.||.++.++..+
T Consensus 27 ee~L~~vA~~vd~km~ei~~~ 47 (138)
T 3hnw_A 27 EEYLQRVASYINNKITEFNKE 47 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 355666777777777755544
No 156
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=23.95 E-value=7e+02 Score=26.80 Aligned_cols=26 Identities=4% Similarity=0.029 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHHHhHHhhcCcchH
Q 004120 555 SKNKAAKLKQEINKKFEEVICRPDIK 580 (773)
Q Consensus 555 ~~~~~~~Lk~Ei~~~~~ea~~~~~lk 580 (773)
..+.++.+.++|++.+.+.....+.+
T Consensus 371 ~eeal~~~~~~i~~~l~~~~~~~e~~ 396 (471)
T 3mq9_A 371 VDEALKDAQTRITAARDGLRAVMEAR 396 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhh
Confidence 45556667777777777654444433
No 157
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=23.33 E-value=3.2e+02 Score=30.80 Aligned_cols=18 Identities=17% Similarity=0.335 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 004120 696 SKCKIQALEQQIKQRLSE 713 (773)
Q Consensus 696 ~k~KIe~l~~~I~~~ie~ 713 (773)
...||..|+..|..+|+-
T Consensus 144 q~skIQRLE~dI~~q~~~ 161 (491)
T 1m1j_A 144 QVVEMKRLEVDIDIKIRA 161 (491)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345666666666666653
No 158
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=22.94 E-value=2.2e+02 Score=30.09 Aligned_cols=145 Identities=10% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhccCCCCChhhHHHHHHHhhhhccccccchhHHHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHh
Q 004120 512 LMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQ 591 (773)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~n~~~Lk~ki~~~ke~s~~~~~~~~~~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~ 591 (773)
++.+++...++|.+.+.. |.+.|++++.-.-+--+.. .+...+.|+.=+.--.. +|++|+..==+|+.
T Consensus 119 lR~~L~Py~~el~~~l~~--~~eelr~kL~Py~~EL~~~----~~~~~eeLr~~L~py~e------eLr~kl~~~veelr 186 (307)
T 2l7b_A 119 VCGRLVQYRGEVQAMLGQ--STEELRVRLASHLRKLRKR----LLRDADDLQKRLAVYQA------GAREGAERGLSAIR 186 (307)
T ss_dssp HHHHHHHHHHHHHHHSSC--CSHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHTS------CCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH----HHhhHHHHHHHHhhHHH------HHHHHHHHHHHHHH
Q ss_pred hcCCCCCCCCChHH-----------HHHHHHHHHHHHHHHHHHHhhcCcchHHhhhHHHHhhhccccchhhhhHHHHHHH
Q 004120 592 DSGASSFSDLEDDL-----------KEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEE 660 (773)
Q Consensus 592 ka~~s~~~~l~~~L-----------keki~k~k~Ef~~~l~~~~~sl~~~~~~l~sk~k~~~~~~~~~~~~~k~~~l~~e 660 (773)
..-+.-.+.+...+ ++||...-+++...|...-..+.-.++-++ ..++.++..
T Consensus 187 ~~L~Py~e~~~~~~~~v~~~k~~~L~~ki~~~~e~Lr~~L~p~~~~~~~~l~~l~----------------~q~ee~~~q 250 (307)
T 2l7b_A 187 ERLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVK----------------EQVAEVRAK 250 (307)
T ss_dssp HHCSSSCTTTTTHHHHHHHHHCCCCSSCSCCHHHHHHHHHHHHHHTCSCSSCCCC----------------SSCSSHHHH
T ss_pred HHhhhHHHHHHHHHhhhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHH
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHH
Q 004120 661 INKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLS 712 (773)
Q Consensus 661 i~kkie~~~~~~~ik~kiE~LK~Evakag~~p~~~~k~KIe~l~~~I~~~ie 712 (773)
+.+..+++ +.||+.--++++++++
T Consensus 251 l~~~aeel----------------------------~~kl~~~~eeLr~~l~ 274 (307)
T 2l7b_A 251 LEEQAQQI----------------------------RLQAEAAQARLKSRFE 274 (307)
T ss_dssp HHHHHHHH----------------------------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH----------------------------HHHhHhHHHHHHHHhh
No 159
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=22.88 E-value=63 Score=27.23 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhccCCCCCCCCChH-HHHHHHHHHHHH
Q 004120 488 QEKFATLRAEFSKGNSRDQLMDPI-LMDKITELKNEF 523 (773)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 523 (773)
..-+..|+.|+...+++|++--|. |..+++||.+|+
T Consensus 12 ~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~el 48 (65)
T 3sja_C 12 VKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEI 48 (65)
T ss_dssp HHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777887778887766553 555566665553
No 160
>4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori}
Probab=22.87 E-value=7.3e+02 Score=27.67 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=27.9
Q ss_pred CCeEEEEEEeecCCCccc-------cccccCCCCCHHHHHHHHHHHHHhhhcC
Q 004120 197 DGRTYMFMGHQKGRNTKE-------NIQRNFGMPTPHGYRKALRMMYYADHHG 242 (773)
Q Consensus 197 ~GrpV~VIa~dkg~~~~e-------~~~~ngG~~~peg~rKA~R~m~lAekf~ 242 (773)
+|--.+|.|+..|..... .+.-.--++..+..+.-..||++-.+.+
T Consensus 100 ngsgl~iagne~gi~npsfylyk~dqltgl~~a~sqeeiqnkv~fme~la~n~ 152 (569)
T 4dvz_A 100 NGSGLVIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKVDFMEFLAQNN 152 (569)
T ss_dssp TSCEEEEECCTTCBSCGGGGTEEECTTTCCEEECCHHHHHHHHHHHHHHHHTT
T ss_pred CCceeEEecCCCCCCCCceEEEecccchhHHHHhhHHHHhhhhhHHHHHHhcc
Confidence 566677777776643221 1111124577788888889998765544
No 161
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=22.14 E-value=2.9e+02 Score=22.46 Aligned_cols=36 Identities=33% Similarity=0.434 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCChHHHHHHHHHHHHHH
Q 004120 579 IKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIE 617 (773)
Q Consensus 579 lkek~~~lk~E~~ka~~s~~~~l~~~Lkeki~k~k~Ef~ 617 (773)
|.||..+|.+-|..- ....--.+||.|-+.+++-++
T Consensus 7 leekvkaleekvkal---ggggrieelkkkweelkkkie 42 (67)
T 1lq7_A 7 LEEKVKALEEKVKAL---GGGGRIEELKKKWEELKKKIE 42 (67)
T ss_dssp HHHHHHHHHHHHHHS---CCSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---cCCccHHHHHHHHHHHHHHHH
Confidence 456677776655533 333344566777666666543
No 162
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=20.76 E-value=1e+02 Score=27.89 Aligned_cols=51 Identities=25% Similarity=0.385 Sum_probs=34.9
Q ss_pred CCChHHHHHHHHHHHHHhhccCCCCChhhHHHHHHHhhhhccccccchhHHHHHHHHHH
Q 004120 507 LMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQE 565 (773)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~Lk~ki~~~ke~s~~~~~~~~~~~~~~Lk~E 565 (773)
-|||-|+.-|.++-+.= .-|+.|..||...+|.-.+...+- .+.-+||++.
T Consensus 45 ~MH~~Ll~~i~~~ee~R-------~~yE~LQDkL~qi~eAR~ALdaLR-~eH~~Klrr~ 95 (98)
T 3f1i_H 45 GMHPQLLELLNQLDERR-------LYYEGLQDKLAQIRDARGALSALR-EEHREKLRRA 95 (98)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 48999999998776653 359999999999998765442221 3344445443
Done!