Citrus Sinensis ID: 004124
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 772 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGU7 | 695 | Probable LRR receptor-lik | yes | no | 0.808 | 0.897 | 0.430 | 1e-145 | |
| Q9SIZ4 | 489 | Inactive receptor-like se | no | no | 0.528 | 0.834 | 0.516 | 1e-119 | |
| Q9LYN6 | 499 | Probable inactive recepto | no | no | 0.523 | 0.809 | 0.530 | 1e-116 | |
| C0LGH8 | 664 | Probable LRR receptor-lik | no | no | 0.801 | 0.932 | 0.325 | 1e-90 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.703 | 0.492 | 0.282 | 1e-47 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.693 | 0.545 | 0.264 | 4e-38 | |
| Q8VZG8 | 1045 | Probable LRR receptor-lik | no | no | 0.696 | 0.514 | 0.260 | 2e-37 | |
| C0LGF4 | 591 | LRR receptor-like serine/ | no | no | 0.690 | 0.901 | 0.251 | 5e-36 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.665 | 0.516 | 0.255 | 8e-36 | |
| Q8VYA3 | 769 | Wall-associated receptor | no | no | 0.347 | 0.348 | 0.352 | 8e-35 |
| >sp|C0LGU7|Y5458_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 295/686 (43%), Positives = 415/686 (60%), Gaps = 62/686 (9%)
Query: 125 GMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGM 184
G LL+FR RV DP G L+ W+ V D+ + CSWFGV C D KV +LNL LGG
Sbjct: 34 GFVLLKFRARVDSDPHGTLANWN----VSDHDHFCSWFGVTCVDNKVQMLNLSGCSLGGT 89
Query: 185 LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT 244
LAPEL QLSEL+S+IL N G IP E +LE LDL NN +G P + +
Sbjct: 90 LAPELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPE 149
Query: 245 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR----------ASCNS--GLFT 292
LLL N++ G ++ + L+ + ++Q++++ ++ S C S L T
Sbjct: 150 NLLLSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSADVLDCVNRKLGYCVSRRSLIT 209
Query: 293 WNKVQPGDNAFRRMLQQVTNGFEAKRKAS--------EPS-SSSSIASSPEPLVSPSLSP 343
NK + AF ++ + + +R++ PS + +SI E L S
Sbjct: 210 RNKAK----AFVLRIRATSRHYMVRRESHGKNYVVNYHPSENETSIFKRRELLEETSNLA 265
Query: 344 SMSSLLSPSFSPSP-SPSESPSVSSPLIIPPAPVNIPIVSSPPH------------LHSA 390
+M P+P +PS SP + + ++ P + + P +++
Sbjct: 266 AM---------PAPDTPSPSPEIIT-IVFPRSSGSFPALTNAKKRIPPLIPPSSPPPLPT 315
Query: 391 PTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVT 450
+ A+ P + E K + V+ G+ +++++I A+ FF R V ++ PW T
Sbjct: 316 NNTIASDPPRKFEEKSKGFKDVWLYVVIGVAAFVAMLIIVAVIFFF-RKRAVKSIGPWKT 374
Query: 451 GLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST 510
GLSGQLQKAFVTGVPKL RSELE ACEDFSNII +F DG TVYKGTLSSGVEIAV ST
Sbjct: 375 GLSGQLQKAFVTGVPKLNRSELETACEDFSNIIEAF-DGY--TVYKGTLSSGVEIAVAST 431
Query: 511 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570
++ +W++ +E +R++IDT+S+VNHKNF+NLIGYCEEDEPF RMMVFEY+PNG+LFE
Sbjct: 432 AILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFE 491
Query: 571 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630
HLH +E EHLDW R RI MG AYCL++MH+L PPI+H L SS+IYLT+DYAAK+ +
Sbjct: 492 HLHDKEMEHLDWNARTRIIMGTAYCLQYMHELNPPISHTKLVSSAIYLTDDYAAKVGEVP 551
Query: 631 FWNNTTAAKTGSAAMELLETSAVDL----ESNVYSFGTILFEMITGRISYSIENGSLENW 686
F + T +K L+ S + L E+NVYSFG ++ E+I+G++S S E GS+ W
Sbjct: 552 F-SGQTGSKPRKPMSGDLDQSLLPLPPEPETNVYSFGVLMLEIISGKLSDSEEEGSILKW 610
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746
AS+YL+ + L+D++DPTL +++E LE + V ++C+ D QRP M+ + +LKE+
Sbjct: 611 ASKYLENDN-LRDMIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEVIN 669
Query: 747 MEPDGATPKLSPLWWAELEILSSEAS 772
+ + ATP+LSPLWWAELEILSSEA+
Sbjct: 670 ISQEQATPRLSPLWWAELEILSSEAT 695
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9SIZ4|Y2027_ARATH Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/426 (51%), Positives = 296/426 (69%), Gaps = 18/426 (4%)
Query: 345 MSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVHE 404
+++ +PS SP P+P + +S + P + VS P SAP A++P
Sbjct: 80 VAATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSP---SAP---LANSP----- 128
Query: 405 SLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGV 464
+ ++ H +V ++ G +GG +L+ A G + S TV PW TGLSGQLQK FVTG+
Sbjct: 129 -IPRNSHSSVPLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQLQKVFVTGI 187
Query: 465 PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLES 524
P LKRSE+EAACEDFSN+IGS +G ++KGTLSSGVEIAV S + + DW + E
Sbjct: 188 PVLKRSEIEAACEDFSNVIGSCP---IGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEI 244
Query: 525 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM 584
FRKKI+ LSK+NHKNF NL+GYCEE EPFTR+++FEY+PNGSLFEHLH +E+EHLDW M
Sbjct: 245 HFRKKIEMLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGM 304
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA 644
RLRIAMG+AYCL+HMHQL PPIAH NL SSS+ LTEDYA K+SDFSF ++ T +
Sbjct: 305 RLRIAMGLAYCLDHMHQLNPPIAHTNLVSSSLQLTEDYAVKVSDFSFGSSETETNINNNT 364
Query: 645 MELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDP 703
+ SA++ E N+YSFG +LFEMITG++ S+ S+++ ++L+GE L +VDP
Sbjct: 365 VIDTHISALNPEDNIYSFGLLLFEMITGKLIESVNKPDSVDSSLVDFLRGET-LAKMVDP 423
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAE 763
TL+S+ + E + VIK+C+ DPK+RP+M+ + L+EIT + P+ ATPKLSPLWWAE
Sbjct: 424 TLESYDAKI-ENIGEVIKSCLRTDPKERPTMQEVTGWLREITGLSPNDATPKLSPLWWAE 482
Query: 764 LEILSS 769
LE+LS+
Sbjct: 483 LEVLST 488
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYN6|Y3565_ARATH Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana GN=At3g56050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/420 (53%), Positives = 293/420 (69%), Gaps = 16/420 (3%)
Query: 355 PSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLH-SAPTSFAAS-TPSQVHESLHKSKHH 412
PS S S P +PP SPP H SAP F T + S S +
Sbjct: 90 PSSSVSTRPDAKRSSTLPPPQ------KSPPAQHVSAPPPFVHHVTLPSLTSSSKTSSNS 143
Query: 413 TVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSEL 472
T+ ++AG I G IL+ A G F +S +V PW TGLSGQLQK F+TGVPKLKRSE+
Sbjct: 144 TIPIVAGCIAGAVFILLLATGVFFFKSKAGKSVNPWRTGLSGQLQKVFITGVPKLKRSEI 203
Query: 473 EAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT 532
EAACEDFSN+IGS +GT++KGTLSSGVEIAV S + S +W+ N+E QFRKKI+
Sbjct: 204 EAACEDFSNVIGSCP---IGTLFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEM 260
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 592
LSK+NHKNFVNL+GYCEE+EPFTR++VFEY+ NG++FEHLH +E+EHLDW MRLRIAMG+
Sbjct: 261 LSKINHKNFVNLLGYCEEEEPFTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGI 320
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLET-- 650
AYCL+HMH L PPI H NL SSS+ LTEDYA KI+DF+F ++T S+ L++T
Sbjct: 321 AYCLDHMHGLKPPIVHSNLLSSSVQLTEDYAVKIADFNFGYLKGPSETESSTNALIDTNI 380
Query: 651 SAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQ 709
S E NV+SFG +LFE++TG++ S++ G S++ + +L+G+ L+++VDPT++SF
Sbjct: 381 SETTQEDNVHSFGLLLFELMTGKLPESVQKGDSIDTGLAVFLRGKT-LREMVDPTIESFD 439
Query: 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSS 769
E + E + VIK+C+ D KQRP M+ + +L+EIT + PD PKLSPLWWAELE+LS+
Sbjct: 440 EKI-ENIGEVIKSCIRADAKQRPIMKEVTGRLREITGLSPDDTIPKLSPLWWAELEVLST 498
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 229/704 (32%), Positives = 361/704 (51%), Gaps = 85/704 (12%)
Query: 101 MAALTLVMLLFLQNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCS 160
+L LV+ LF +S ++E AL RF+E + DP +S W+D N +PC
Sbjct: 6 FCSLALVLGLFF--VSCDGFASNEVQALRRFKEAIYEDPLLVMSNWND-----PNSDPCD 58
Query: 161 WFGVECSDGK--VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 218
W G+ CS K V+ +N+ + G LAPELGQ++ L+ +IL N GTIPKEIG LK
Sbjct: 59 WTGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKN 118
Query: 219 LEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 278
L+ILDLG N+ GP P++ G+ + + L +N G + EL LK + E+ +D
Sbjct: 119 LKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDR---- 174
Query: 279 NAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVS 338
N++Q +L +G+++K +S +SS++IA + L
Sbjct: 175 ---------------NRLQGS------LLVAGASGYQSKVYSS--NSSANIAGLCKSLKV 211
Query: 339 PSLS---------PSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHS 389
S + +L SF + ++ S N +V + H
Sbjct: 212 ADFSYNFFVGNIPKCLENLPRTSFQGNCMQNKDLKHRSS----SQCANAQLVKT----HG 263
Query: 390 APTSFAASTPSQVHESLHKSKHHTVLVLAGIIGG--LSLILISAIGFFVCR-SSKVVTVK 446
+P++ +Q+ H++ L+ I+ G + L+L+ A+ V R +++ +
Sbjct: 264 SPSAAPKHQSAQMVAKHHRASKPKWLLALEIVTGSMVGLLLLVALFSAVHRWNNRSTLII 323
Query: 447 PWVTGLSGQ------LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLS 500
PW S + + + V +L R ELE ACEDFSNIIG +D + YKGTL
Sbjct: 324 PWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELEVACEDFSNIIGLSADSQI---YKGTLK 380
Query: 501 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560
G EIAV S VK DW+ LE F++++ L+++NH+N L+GYC+E PFTRM+VF
Sbjct: 381 GGSEIAVISLCVKEE-DWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVF 439
Query: 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLT 619
EY+ NG+L+EHLH EA + WA R++I +G+A L+++H +L PP L S++IYLT
Sbjct: 440 EYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLT 499
Query: 620 EDYAAKISDFSFWNNTTA---------AKTGSAAM--ELLETSAVDLESNVYSFGTILFE 668
ED+ K+ DF W A + GS + +E+ +D+ N+Y+FG +L E
Sbjct: 500 EDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLE 559
Query: 669 MITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP 728
+++GR Y + G L WA E+L+ + + +VDP LK F + LE + V C++ DP
Sbjct: 560 IVSGRPPYCKDKGFLIEWAKEFLEAPEAMSGLVDPELKHFNQEDLETVCEVASQCLNRDP 619
Query: 729 ------KQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEI 766
+PS++ + L+ ++ A + S L WAEL +
Sbjct: 620 TNNNNNHNKPSVQELCETLESRISLSIS-AELRSSSLAWAELAL 662
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 276/598 (46%), Gaps = 55/598 (9%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF 233
L L D G L E+G LS+L ++ + +N G +P EI K L+ LD+ NNFSG
Sbjct: 510 LQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTL 569
Query: 234 PSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFTW 293
PS+ G+ + L L L NN G I L L ++E+Q+ + + R L +
Sbjct: 570 PSEVGSLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRE-----LGSL 624
Query: 294 NKVQPGDN-AFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPS 352
+Q N ++ ++ ++ + E ++ S E PS ++SSLL +
Sbjct: 625 TGLQIALNLSYNKLTGEIPPEL-SNLVMLEFLLLNNNNLSGE---IPSSFANLSSLLGYN 680
Query: 353 FS----PSPSP-----SESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVH 403
FS P P S S + + + P P+N I + P FA S +
Sbjct: 681 FSYNSLTGPIPLLRNISMSSFIGNEGLCGP-PLNQCIQTQP---------FAPSQSTGKP 730
Query: 404 ESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTG 463
+ SK + + A +IGG+SL+LI+ I + + R + V S +
Sbjct: 731 GGMRSSK--IIAITAAVIGGVSLMLIALIVYLMRRPVRTVASSAQDGQPSEMSLDIYFPP 788
Query: 464 VPKLKRSELEAACEDF--SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKN 521
+L AA ++F S ++G G GTVYK L +G +AV + + N
Sbjct: 789 KEGFTFQDLVAATDNFDESFVVGR---GACGTVYKAVLPAGYTLAVKKLASNHEGGNNNN 845
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 581
+++ FR +I TL + H+N V L G+C + ++++EY P GSL E LH + +LD
Sbjct: 846 VDNSFRAEILTLGNIRHRNIVKLHGFCNHQG--SNLLLYEYMPKGSLGEILH-DPSCNLD 902
Query: 582 WAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------- 633
W+ R +IA+G A L ++H P I HR+++S++I L + + A + DF
Sbjct: 903 WSKRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPHS 962
Query: 634 ---NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR--ISYSIENGSLENWAS 688
+ A G A E T V +S++YS+G +L E++TG+ + + G + NW
Sbjct: 963 KSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQPIDQGGDVVNWVR 1022
Query: 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN---CVHPDPKQRPSMRGIAAKLKE 743
Y++ + ++D L E ++ +L V+K C P RPSMR + L E
Sbjct: 1023 SYIRRDALSSGVLDARLTLEDERIVSHMLTVLKIALLCTSVSPVARPSMRQVVLMLIE 1080
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 171/647 (26%), Positives = 273/647 (42%), Gaps = 112/647 (17%)
Query: 168 DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKEL-------- 219
+G ++ L++ D L G++ +L + +L+ +IL NN FFG IP+E+G+ K L
Sbjct: 360 NGNLIKLDVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKN 419
Query: 220 ------------------------------------EILD---LGFNNFSGPFPSDFGNS 240
++LD L N FSG P GN
Sbjct: 420 LLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMSGDVLDQIYLSNNWFSGEIPPAIGNF 479
Query: 241 FSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA--SRASCNSGLFTWNKVQP 298
+L TL LD N++ G I E+ LK +S I + +T S + C++ +
Sbjct: 480 PNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPDSISRCSTLISV------ 533
Query: 299 GDNAFRRMLQQVTNGFE-AKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPSP 357
D + R+ ++ G K + S + + S P+ +M+SL + S +
Sbjct: 534 -DLSRNRINGEIPKGINNVKNLGTLNISGNQLTGS-----IPTGIGNMTSLTTLDLSFND 587
Query: 358 SPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVL 417
P L+ PH S PT T H +L + V+
Sbjct: 588 LSGRVPLGGQFLVFNETSFAGNTYLCLPHRVSCPTR-PGQTSDHNHTALFSPSRIVITVI 646
Query: 418 AGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLK-RSELEAAC 476
A I G LILIS + + + K L+ +L T KL +SE C
Sbjct: 647 AAITG---LILISV-------AIRQMNKKKNQKSLAWKL-----TAFQKLDFKSEDVLEC 691
Query: 477 EDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS--RADWSKNLESQFRKKIDTLS 534
NIIG G G VY+G++ + V++A+ + R+D F +I TL
Sbjct: 692 LKEENIIGK---GGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHG------FTAEIQTLG 742
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594
++ H++ V L+GY + T ++++EY PNGSL E LH + HL W R R+A+ A
Sbjct: 743 RIRHRHIVRLLGYVANKD--TNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAK 800
Query: 595 CLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGS 642
L ++H +P I HR+++S++I L D+ A ++DF ++ A G
Sbjct: 801 GLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGY 860
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGR--ISYSIENGSLENWASEYLKG-EQP--- 696
A E T VD +S+VYSFG +L E+I G+ + E + W + QP
Sbjct: 861 IAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDA 920
Query: 697 --LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ IVDP L + + + + CV + RP+MR + L
Sbjct: 921 AIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 263/615 (42%), Gaps = 77/615 (12%)
Query: 174 LNLRDLC---LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
LN DL G L+ Q +L + IL NNS G IP EI + +L LDL N +
Sbjct: 456 LNFIDLSNNNFHGQLSANWEQSQKLVAFILSNNSITGAIPPEIWNMTQLSQLDLSSNRIT 515
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA--------- 281
G P N ++ L L+ N+ G I + +L + + + + ++
Sbjct: 516 GELPESISNINRISKLQLNGNRLSGKIPSGIRLLTNLEYLDLSSNRFSSEIPPTLNNLPR 575
Query: 282 ------SRASCNS----GLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIAS 331
SR + GL +++Q D ++ ++ ++++ F + + S + S
Sbjct: 576 LYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYNQLDGEISSQFRSLQNLERLDLSHNNLS 635
Query: 332 SPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAP 391
P PS +L+ + VS + P P N ++PP
Sbjct: 636 GQIP-------PSFKDMLALTHV---------DVSHNNLQGPIPDNAAFRNAPPDAFEGN 679
Query: 392 TSFAAST-------PSQVHESL--HKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKV 442
S P + S HK ++ + +L IIG + +IL G F+C +
Sbjct: 680 KDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAI-IILSVCAGIFICFRKRT 738
Query: 443 VTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFS--NIIGSFSDGTVGTVYKGTLS 500
++ SG + + K++ E+ A +F +IG+ G G VYK L
Sbjct: 739 KQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGT---GGHGKVYKAKLP 795
Query: 501 SGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559
+ + +AV + + + S + + +F +I L+++ H+N V L G+C +V
Sbjct: 796 NAI-MAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRR--NTFLV 852
Query: 560 FEYSPNGSLFEHL-HIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIY 617
+EY GSL + L + EA+ LDW R+ + G+A+ L +MH +P I HR++ S +I
Sbjct: 853 YEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNIL 912
Query: 618 LTEDYAAKISDF----------SFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILF 667
L EDY AKISDF S W + A G A EL V + +VYSFG +
Sbjct: 913 LGEDYEAKISDFGTAKLLKPDSSNW-SAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTL 971
Query: 668 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN---CV 724
E+I G + + +S LK I D L + EE+L ++K C+
Sbjct: 972 EVIKGEHPGDL----VSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCL 1027
Query: 725 HPDPKQRPSMRGIAA 739
H DP+ RP+M I+
Sbjct: 1028 HSDPQARPTMLSIST 1042
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGF4|FEI1_ARATH LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 164/653 (25%), Positives = 270/653 (41%), Gaps = 120/653 (18%)
Query: 118 ARCLNSEGMALLRFRERVVR-DPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNL 176
++ ++ +G ALL FR V R D F + +W D +PC+W GV C D K
Sbjct: 27 SQAISPDGEALLSFRNAVTRSDSF--IHQWRPED-----PDPCNWNGVTC-DAKT----- 73
Query: 177 RDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD 236
K + L+L ++ GP P D
Sbjct: 74 ----------------------------------------KRVITLNLTYHKIMGPLPPD 93
Query: 237 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFTWNKV 296
G L L+L NN G I L + EI + ++ T
Sbjct: 94 IGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPI--------------- 138
Query: 297 QPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPS 356
P + LQ++ SS+ S P P L + +S +F
Sbjct: 139 -PAEMGDLPGLQKL-------------DMSSNTLSGPIPASLGQLKKLSNFNVSNNFLVG 184
Query: 357 PSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLV 416
PS+ V S N+ + + S S+ SQ ++ K+ ++
Sbjct: 185 QIPSDG--VLSGFSKNSFIGNLNLCGKHVDVVCQDDSGNPSSHSQSGQNQKKNSGKLLIS 242
Query: 417 LAGIIGGLSLI-LISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTG-VPKLKRS---E 471
+ +G L L+ L+ G F+ + V +K + G G +P + +
Sbjct: 243 ASATVGALLLVALMCFWGCFLYKKLGKVEIKSLAKDVGGGASIVMFHGDLPYSSKDIIKK 302
Query: 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKID 531
LE E+ +IIG G GTVYK + G A+ K ++ + F ++++
Sbjct: 303 LEMLNEE--HIIGC---GGFGTVYKLAMDDGKVFAL-----KRILKLNEGFDRFFERELE 352
Query: 532 TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMG 591
L + H+ VNL GYC + P +++++++Y P GSL E LH + E LDW R+ I +G
Sbjct: 353 ILGSIKHRYLVNLRGYC--NSPTSKLLLYDYLPGGSLDEALH-ERGEQLDWDSRVNIIIG 409
Query: 592 MAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAKT 640
A L ++H +P I HR+++SS+I L + A++SDF S A
Sbjct: 410 AAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTF 469
Query: 641 GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYS---IENG-SLENWASEYLKGEQP 696
G A E +++ +++VYSFG ++ E+++G+ IE G ++ W ++L E+
Sbjct: 470 GYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWL-KFLISEKR 528
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
+DIVDP + Q L+ LL + CV P P++RP+M + +L E M P
Sbjct: 529 PRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRV-VQLLESEVMTP 580
|
Involved in the signaling pathway that regulates cell wall function, including cellulose biosynthesis, likely via an 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated signal (a precursor of ethylene). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 148/579 (25%), Positives = 250/579 (43%), Gaps = 65/579 (11%)
Query: 200 LRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
L NNSF G I K IG L +L L N F+G P + G+ +L L N++ G +
Sbjct: 427 LVNNSFSGEISKSIGGASNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPD 486
Query: 260 ELHVLKVISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRK 319
L L + + + + + SG+ +W K+ + A ++ + +
Sbjct: 487 SLMSLGELGTLDLHGNQFS-----GELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSV 541
Query: 320 ASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIP 379
+ S ++ S P+ SL + +L S PS + + I
Sbjct: 542 LNYLDLSGNMFSGKIPVSLQSLKLNQLNLSYNRLSGDLPPSLAKDMYKNSFI-------- 593
Query: 380 IVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRS 439
P L S K V +L I +++L++ + +F +
Sbjct: 594 ---GNPGLCGDIKGLCGSEN-------EAKKRGYVWLLRSIFVLAAMVLLAGVAWFYFK- 642
Query: 440 SKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSE---LEAACEDFSNIIGSFSDGTVGTVYK 496
+ + + + K + KL SE LE+ ED N+IG+ G G VYK
Sbjct: 643 -----YRTFKKARAMERSKWTLMSFHKLGFSEHEILESLDED--NVIGA---GASGKVYK 692
Query: 497 GTLSSGVEIAVT---STSVKSRAD------WSKNLESQ-FRKKIDTLSKVNHKNFVNLIG 546
L++G +AV + SVK D + ++ + F +++TL K+ HKN V L
Sbjct: 693 VVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWC 752
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT-PP 605
C + +++V+EY PNGSL + LH + L W R +I + A L ++H + PP
Sbjct: 753 CCSTRD--CKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPP 810
Query: 606 IAHRNLQSSSIYLTEDYAAKISDFSFWN------------NTTAAKTGSAAMELLETSAV 653
I HR+++S++I + DY A+++DF + A G A E T V
Sbjct: 811 IVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRV 870
Query: 654 DLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
+ +S++YSFG ++ E++T + E G L W L ++ ++ ++DP L S +
Sbjct: 871 NEKSDIYSFGVVILEIVTRKRPVDPELGEKDLVKWVCSTLD-QKGIEHVIDPKLDSCFKE 929
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750
+ ++L V C P P RPSMR + L+EI + D
Sbjct: 930 EISKILNVGLLCTSPLPINRPSMRRVVKMLQEIGGGDED 968
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 165/301 (54%), Gaps = 33/301 (10%)
Query: 471 ELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 528
ELE A E+FS I+G +G GTVYKG L G +AV KS+ LE +F
Sbjct: 425 ELEKATENFSLTRILG---EGGQGTVYKGMLVDGRIVAVK----KSKVVDEDKLE-EFIN 476
Query: 529 KIDTLSKVNHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMR 585
++ LS++NH+N V L+G C E D P ++V+E+ PNG+LFEHLH ++ W +R
Sbjct: 477 EVVILSQINHRNIVKLLGCCLETDVP---ILVYEFIPNGNLFEHLHDDSDDYTMTTWEVR 533
Query: 586 LRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---- 640
LRIA+ +A L ++H + PI HR+++S++I L E + AK+SDF T T
Sbjct: 534 LRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTT 593
Query: 641 ------GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI----ENGSLENWASEY 690
G E ++S +S+VYSFG +L E+ITG S S E +L + +
Sbjct: 594 VVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLA 653
Query: 691 LKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
+K E L DI+D ++ + N + + + C++ ++RPSMR ++ +L++I +
Sbjct: 654 MK-ENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIRSYSE 712
Query: 750 D 750
D
Sbjct: 713 D 713
|
Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 772 | ||||||
| 449523573 | 657 | PREDICTED: probable LRR receptor-like se | 0.816 | 0.958 | 0.599 | 0.0 | |
| 356569509 | 699 | PREDICTED: probable LRR receptor-like se | 0.866 | 0.957 | 0.553 | 0.0 | |
| 356569292 | 644 | PREDICTED: probable LRR receptor-like se | 0.794 | 0.951 | 0.569 | 0.0 | |
| 356537999 | 638 | PREDICTED: probable LRR receptor-like se | 0.787 | 0.952 | 0.561 | 0.0 | |
| 356551890 | 692 | PREDICTED: probable LRR receptor-like se | 0.830 | 0.926 | 0.551 | 0.0 | |
| 356551399 | 643 | PREDICTED: probable LRR receptor-like se | 0.829 | 0.995 | 0.518 | 0.0 | |
| 356498966 | 686 | PREDICTED: probable LRR receptor-like se | 0.844 | 0.950 | 0.554 | 0.0 | |
| 356541803 | 629 | PREDICTED: inactive receptor-like serine | 0.766 | 0.941 | 0.571 | 0.0 | |
| 449460929 | 680 | PREDICTED: probable LRR receptor-like se | 0.861 | 0.977 | 0.509 | 0.0 | |
| 356499209 | 645 | PREDICTED: probable LRR receptor-like se | 0.809 | 0.968 | 0.532 | 0.0 |
| >gi|449523573|ref|XP_004168798.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/677 (59%), Positives = 495/677 (73%), Gaps = 47/677 (6%)
Query: 120 CLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDL 179
C G+ALLR R+ V DPFGAL+ W+D DG D+ CSWFGVECSDGKVVILNLRDL
Sbjct: 4 CFFDAGLALLRIRDAVGSDPFGALANWNDKDGEFDH---CSWFGVECSDGKVVILNLRDL 60
Query: 180 CLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGN 239
CLGG LAPE+G+ +KSIILRNNSF G IP+EIG+L ELE+LDLGFNNFSGPFP D GN
Sbjct: 61 CLGGTLAPEMGKFPYIKSIILRNNSFHGGIPQEIGDLLELEVLDLGFNNFSGPFPLDLGN 120
Query: 240 SFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFTWN--KVQ 297
+ SLTTLLLD+N+++ I+PE + L ++SE +DE L++ ++SC WN + Q
Sbjct: 121 NLSLTTLLLDHNEFITSITPEAYELNLLSETLMDEEQLSSIQGKSSCTRETVRWNFGQFQ 180
Query: 298 PGDNAFRRM--LQQVTNGF--------------------EAKRKASEPSSSSSIASSPEP 335
D RR+ +Q F S S S+S P P
Sbjct: 181 DADYQRRRLGGVQSPKRSFFSLPPSSFASSPSPLSPSAPPFSPAPSPRSPSASPTEPPAP 240
Query: 336 LVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFA 395
L+S + +PS+ +P+ P+ +P++ +P+ V +PPH P +
Sbjct: 241 LLSLAPAPSLH------LNPARPPAVAPTLHAPVH----------VLTPPHSRGVPPRSS 284
Query: 396 ASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQ 455
A +P+ + S +K+K+H VL+L GI+ G +L + +G + RSSKVVTVKPW TGLSGQ
Sbjct: 285 APSPNLIGRS-NKNKNHKVLILTGIVAGSLFLLFATVGILMFRSSKVVTVKPWATGLSGQ 343
Query: 456 LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSR 515
LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSD TV YKGTLSSGVEIAVTST+V S
Sbjct: 344 LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDITV---YKGTLSSGVEIAVTSTAVTSN 400
Query: 516 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 575
ADWSK E QFRKKI+TLS+VNHKNFV+LIG+CEE +PFTRMMVFEY+PNG+LFEHLHI+
Sbjct: 401 ADWSKTKEEQFRKKIETLSRVNHKNFVSLIGFCEEAQPFTRMMVFEYAPNGTLFEHLHIK 460
Query: 576 EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635
EAEHLDW MRLRIAMG+AYCL+HMHQL P+ HR+L SSS+YLTEDYAAK+SDFS+W+
Sbjct: 461 EAEHLDWEMRLRIAMGVAYCLDHMHQLDLPVVHRHLCSSSVYLTEDYAAKLSDFSYWSEA 520
Query: 636 TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
TAAK GSA +ELLETS DLESNVYSFG IL EMITGR+ +S+++GSL +WAS++LKGEQ
Sbjct: 521 TAAKLGSATVELLETSPADLESNVYSFGVILLEMITGRLPFSVDDGSLADWASDFLKGEQ 580
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPK 755
LKDIVDP L SF+E LE L VIK CV P+PKQRP+M IA +LKEITA+EP GATPK
Sbjct: 581 LLKDIVDPILSSFKEEQLENLSQVIKMCVKPEPKQRPTMPEIALRLKEITALEPAGATPK 640
Query: 756 LSPLWWAELEILSSEAS 772
LSPLWWAELEILS++ +
Sbjct: 641 LSPLWWAELEILSTDTN 657
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569509|ref|XP_003552942.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45840-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/710 (55%), Positives = 494/710 (69%), Gaps = 41/710 (5%)
Query: 88 MNQPCRFHRLRLNMAALTLVMLLFLQNLSLARC--LNSEGMALLRFRERVVRDPFGALSK 145
M + RF V+ LFL L C LN+EG+AL + RERVVRDP GALS
Sbjct: 1 MEERWRFITWLKLFRVFVAVVSLFLFILEPIWCSTLNNEGLALQKMRERVVRDPLGALSS 60
Query: 146 WSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSF 205
W+ ++PCSWFGVECS G VV LNL+DLCL G LA E+G+L +KSIILRNN F
Sbjct: 61 WNSKG----EIDPCSWFGVECSHGNVVSLNLKDLCLHGTLALEIGKLVHIKSIILRNNYF 116
Query: 206 FGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISPELHVL 264
+G IPKEI +L++LE+LDLG+NNFSG FP D SLTTLLLDNN +L ++PE++ L
Sbjct: 117 YGDIPKEILQLEDLEVLDLGYNNFSGQFPFHDLATYPSLTTLLLDNNDHLASLTPEVYEL 176
Query: 265 KVISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPS 324
K SE+ V E LT A +R +C W+ GD A RR L Q NG +++ + +
Sbjct: 177 KTFSELHVAEEQLTGATTREACVRITNNWHIGTHGDIASRRALLQEANG---EKRGDDDT 233
Query: 325 SSSSIASSPEPLVSPSLSPSMSSLLSP---------------------SFSPSPSPSESP 363
+ S + P L S S S S + SPSPSP +P
Sbjct: 234 ETLSPSPFPSTLSPFSEPFSPSESPSDSPISSPEVSPSPSPSLSNFFFTLSPSPSPEVAP 293
Query: 364 SVSSPLIIPPAPVNIP-IVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIG 422
+ P + PPA N P +VS+PP + AS+ +Q + + K HT ++ + + G
Sbjct: 294 T---PDLSPPA--NPPMVVSTPPQSNWVSMPSPASSSNQGNANSSNPKQHTAIIWSTVGG 348
Query: 423 GLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNI 482
LIL+SAI F RS+KVVTVKPW TGLSGQLQKAFV+GVP LKR+ELE ACEDFSNI
Sbjct: 349 FSFLILVSAIAFVCFRSNKVVTVKPWTTGLSGQLQKAFVSGVPSLKRTELEVACEDFSNI 408
Query: 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
IGS +GT+ YKGTLSSGVEI V S++V S +WSKN+E+QFRKKI+ LS+VNHKNFV
Sbjct: 409 IGSLPEGTI---YKGTLSSGVEIGVASSAVTSSQNWSKNMETQFRKKIEMLSRVNHKNFV 465
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 602
NLIGYCEE++PFTRMMVFEY+PNG+LFEHLHI+EAE LDW MR+RIAMG+AYCLEH+HQL
Sbjct: 466 NLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHLHQL 525
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSF 662
TPPIA+RN+ SSSIYLTEDYAAK+SD SFW + + K GS A +LLET + +++NVYSF
Sbjct: 526 TPPIAYRNILSSSIYLTEDYAAKLSDLSFWTDIVSTKKGSEAPQLLETPSAYIKANVYSF 585
Query: 663 GTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN 722
G +LFE+ITGRI +++ENG E+WA EY+KG QPL+D+VD +L S Q N +E+ V+K+
Sbjct: 586 GVLLFELITGRIPFAVENGLFEDWAEEYMKG-QPLRDLVDTSLNSLQANEIEKWEEVVKS 644
Query: 723 CVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSSEAS 772
CVHPDP++RP+MR + AKLKEITAM PDGATPK SPLWWAE+EI+SS+ S
Sbjct: 645 CVHPDPEKRPTMREVTAKLKEITAMGPDGATPKASPLWWAEIEIMSSDLS 694
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356569292|ref|XP_003552837.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/665 (56%), Positives = 466/665 (70%), Gaps = 52/665 (7%)
Query: 113 QNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVV 172
QN SL LN EG ALL+F+ +V DPF ALS W ND V VNPC+WFGVECSDG+VV
Sbjct: 27 QNFSLCCSLNEEGKALLKFKHGIVNDPFDALSNWV-NDEVA--VNPCNWFGVECSDGRVV 83
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+LNL+DLCL G L PEL L +KSIILRNNSF+G IP+ I L ELE+LDLG+NNFSGP
Sbjct: 84 VLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGP 143
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFT 292
P D GN+ SLT LLLDNN +L G SPE++ LK++SE QVDE+ L A +C +
Sbjct: 144 LPRDLGNNISLTILLLDNNDHLCGFSPEINELKMLSEYQVDENQLIRAEKVPACRRSIKQ 203
Query: 293 WNK-VQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSP 351
++ V N +R+LQ T+ SP V P
Sbjct: 204 QSRHVGQNKNGVQRLLQTRTHE----------------GGSPFNRVFPV----------- 236
Query: 352 SFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSP---PHLHSAPTSFAASTPSQVHESLHK 408
S +P PS + P++ PAPV+ +SP P SAP ++S
Sbjct: 237 SPAPFPSAPPPAPATPPVVQKPAPVDRNNSASPSPLPGPRSAPLYKSSS----------- 285
Query: 409 SKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLK 468
SK+H V++LAG++GG +LIS IG ++C+++KV TVKPW TGLSGQLQ AFVTGVPKLK
Sbjct: 286 SKNHVVVILAGVMGGAVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQNAFVTGVPKLK 345
Query: 469 RSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 528
RSELEAACEDFSN+IG+ S +GTVYKGTLSSGVEIAV S + S DWSK LE+QFR
Sbjct: 346 RSELEAACEDFSNVIGTSS---IGTVYKGTLSSGVEIAVASVAATSSKDWSKTLEAQFRN 402
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
KIDTLSKVNHKNFVNL+G+CEEDEPFTRM+VFEY+PNG+LFEHLHI+E+EHLDW RLRI
Sbjct: 403 KIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRI 462
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELL 648
AMGMAYCL+HMHQL PP+ NL SS++ LT+DYAAKISD SF N +A S A +
Sbjct: 463 AMGMAYCLQHMHQLEPPLVLSNLNSSAVQLTDDYAAKISDLSFLNEIASAVIKSPARKNT 522
Query: 649 ETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDPTLKS 707
+ + SN+YSFG ILFEM+TGR+ YS++N GSL++WAS YL+G+QPLK++VDPTL S
Sbjct: 523 DMTPA---SNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLAS 579
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEIL 767
FQE LE++ +IK+CVHPD KQRP+M+ + +L+EIT + PD A PKLSPLWWAELEI
Sbjct: 580 FQEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIA 639
Query: 768 SSEAS 772
S AS
Sbjct: 640 SVNAS 644
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356537999|ref|XP_003537493.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/664 (56%), Positives = 469/664 (70%), Gaps = 56/664 (8%)
Query: 113 QNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVV 172
QN SL LN EG ALL+F++ +V DPF ALS W ND V VNPC+WFGVECSDG+VV
Sbjct: 27 QNFSLCCSLNEEGKALLKFKQGIVNDPFDALSNWV-NDEV--EVNPCNWFGVECSDGRVV 83
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+LNL+DLCL G L PEL L +KSIILRNNSF G IP+ I L E+E+LDLG+NNFSGP
Sbjct: 84 VLNLKDLCLEGNLVPELANLVHIKSIILRNNSFHGIIPQGIAHLNEMEVLDLGYNNFSGP 143
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFT 292
P+D GN+ LT LLLDNN +L G SPE++ LK++SE QVDE+ L++A + +
Sbjct: 144 LPTDLGNNIPLTILLLDNNDHLCGFSPEINELKMVSEYQVDENQLSSAEKVP-----IRS 198
Query: 293 WNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPS 352
+ +N R++LQ T R+ P + + S
Sbjct: 199 IKRHAGQNNGVRKLLQVRT------REGGSP---------------------FNRVFPDS 231
Query: 353 FSPSPSPSESPSVSSPLIIPPAPVNIPIVSSP---PHLHSAPTSFAASTPSQVHESLHKS 409
+P PS + P++ PAPV+ +SP P SAP S ++S+
Sbjct: 232 PAPFPSAPSPAPATPPVVQKPAPVDRNNSASPSPLPEPRSAPLSKSSSS----------- 280
Query: 410 KHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKR 469
K+H V++LAG++GG+ +LIS IG ++C+++KV TVKPW TGLSGQLQKAFVTGVPKLKR
Sbjct: 281 KNHLVVILAGVMGGVVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKR 340
Query: 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK 529
SELEAACEDFSN+IG+ S +GTVYKGTLSSGVEIAV S + S DWSK LE+QFR K
Sbjct: 341 SELEAACEDFSNVIGTSS---IGTVYKGTLSSGVEIAVASVAATSSKDWSKTLEAQFRNK 397
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA 589
IDTLSKVNHKNFVNL+G+CEEDEPFTRM+VFEY+PNG+LFEHLHI+E+EHLDW RLR+A
Sbjct: 398 IDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRVA 457
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLE 649
MGMAYCL+HMHQL PP+ NL SS + LT+DYAAKISD SF N +A S A + +
Sbjct: 458 MGMAYCLQHMHQLEPPLVLSNLNSSGVQLTDDYAAKISDLSFLNEIASAVIKSPARKNTD 517
Query: 650 TSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDPTLKSF 708
+ SN+YSFG ILFEM+TGR+ YS++N GSL++WAS YL+G+QPLK++VDPTL SF
Sbjct: 518 MTPA---SNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLASF 574
Query: 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILS 768
QE LE++ +IK+CVHPD KQRP+M+ + +L+EIT + PD A PKLSPLWWAELEI S
Sbjct: 575 QEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIAS 634
Query: 769 SEAS 772
+AS
Sbjct: 635 VDAS 638
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551890|ref|XP_003544305.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45840-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/691 (55%), Positives = 472/691 (68%), Gaps = 50/691 (7%)
Query: 113 QNLSLARCLNSE-GMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKV 171
Q SL L SE G+ALL RERVV DP G LS WS DG +V+PCSWFGVEC G V
Sbjct: 21 QKQSLCSTLKSEEGLALLALRERVVSDPQGTLSSWSGADG---DVDPCSWFGVECFHGYV 77
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
V LNL+DLCL G LAPE+G+L+ ++SIILRNNSFFG IPKEI L+ELE+LDLG+NNFSG
Sbjct: 78 VTLNLKDLCLEGTLAPEIGKLAHIRSIILRNNSFFGEIPKEILHLEELEVLDLGYNNFSG 137
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR----ASCN 287
P D GN SLTTLLLDNN YL ++ EL+ LK+ SE +E LT A SR CN
Sbjct: 138 SIPFDHGNISSLTTLLLDNNYYLANLTTELYKLKMNSEFHANEEQLTGATSRELFVGRCN 197
Query: 288 SGLFTWNKVQPGDNAFRRMLQQVTNGF-------EAKRKASEPSSSSSIASSPEPLVSPS 340
+ Q GD ++RR L +V N + + + S+S S P S
Sbjct: 198 LRRIS----QHGDRSYRRQLLKVANAANTPKIQGDVNQGTLKQSASHFRFSLPPDFEPFS 253
Query: 341 LSPSMSSLLSPS------------------FSPSPSPSESPSVSSPLIIPPAPVNIPI-V 381
SPS S L SP F+PSP +P + P PVN P+ V
Sbjct: 254 SSPSESPLYSPGSAPLSYSPSPSPSPSSIFFAPSPVVLPTPDI-------PPPVNTPVTV 306
Query: 382 SSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSK 441
S+PP + AP+ + S + S HH+V++ + + G LIL+SAI F +S K
Sbjct: 307 STPPEFNWAPSPSSFSNQGNTNSS--NQIHHSVIIWSAVGGFSLLILLSAIIFACFQSRK 364
Query: 442 VVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSS 501
VV VKPW TGLSGQLQKAF+ GVP LKR E+EAA E FSNIIGS DG V YKGTLSS
Sbjct: 365 VVAVKPWSTGLSGQLQKAFIKGVPSLKRGEIEAASEYFSNIIGSLPDGIV---YKGTLSS 421
Query: 502 GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561
GVEIAV S++V + +WSK++E+QFRKKI +LS+VNHKNFVNLIGYCEE++PF+RMMVFE
Sbjct: 422 GVEIAVASSAVTTAQNWSKSMEAQFRKKIASLSRVNHKNFVNLIGYCEENKPFSRMMVFE 481
Query: 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621
Y+PNG+LFEHLHI+E E L+W MR+RIAMG+AYCLE+MH+L PPIAHRNLQSS IYLTED
Sbjct: 482 YAPNGTLFEHLHIREGEELNWTMRMRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTED 541
Query: 622 YAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681
YAAK+SD S WN+ A K GSA +LLETS+ D + NVYSFG ILFE+ITGRI + +
Sbjct: 542 YAAKVSDLSLWNDMCATKNGSATTQLLETSSADTKDNVYSFGIILFELITGRIPLAGNSE 601
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
L +WA+EY++ + L+D+VD LKS QE +EE VI+NCV PDP++RP+M+ I ++L
Sbjct: 602 LLADWAAEYVRWGKSLRDVVDLRLKSLQEEEIEEWSEVIRNCVQPDPEKRPTMKEITSRL 661
Query: 742 KEITAMEPDGATPKLSPLWWAELEILSSEAS 772
KE+TAM PDGA PK SPLWWAE+ I S+++S
Sbjct: 662 KELTAMGPDGANPKASPLWWAEMAITSTDSS 692
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356551399|ref|XP_003544063.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/686 (51%), Positives = 472/686 (68%), Gaps = 46/686 (6%)
Query: 88 MNQPCRFHRLRLNMAALTLVMLLFL-QNLSLARCLNSEGMALLRFRERVVRDPFGALSKW 146
M++ + R + A V + FL +L L LN EG ALL+ R+R+V DPF ALS W
Sbjct: 1 MDKNRKLSRFKDLSIAFCFVAVFFLFHHLGLCCSLNEEGNALLKLRQRIVSDPFDALSNW 60
Query: 147 SDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFF 206
D++ +V+PC+WFGVECSDG+VV+LNL+DLCLGG LAPEL +L +KSIILRNNSF
Sbjct: 61 VDDEA---SVDPCNWFGVECSDGRVVVLNLKDLCLGGTLAPELVKLVNIKSIILRNNSFS 117
Query: 207 GTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKV 266
GTIP+ +LKELE+LDLG+NNFSG P+D G++ SLT LLLDNN++L G+SPE++ L++
Sbjct: 118 GTIPEGFVQLKELEVLDLGYNNFSGHLPADLGSNISLTILLLDNNEFLVGLSPEINELRM 177
Query: 267 ISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSS 326
+SE QVDE+ LTNAA +C + A R + Q ++ + P+++
Sbjct: 178 LSECQVDENQLTNAAKMPACT------------ERATTRHIGQGKGTRRSQHSNTSPAAN 225
Query: 327 SSIASSPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPH 386
+ S S +S + P P + +S SSPPH
Sbjct: 226 HYQFNRVAAPPLESPSSPSASPSGSAKPPVPKLAPHRKNASD-------------SSPPH 272
Query: 387 LHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVK 446
S + + + + SK HTV +LAG+IGG ++ S+IG ++C++ KV V+
Sbjct: 273 STSGSGTLSKTKSTS-------SKVHTVPILAGVIGGAVFLIFSSIGIYLCKT-KVANVR 324
Query: 447 PWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIA 506
PW GLSGQLQKAFVTG KLKRS+LEAACEDFSN+IG + +G +YKGTLS GVEIA
Sbjct: 325 PWAMGLSGQLQKAFVTGAQKLKRSDLEAACEDFSNVIG---NSPIGILYKGTLSGGVEIA 381
Query: 507 VTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNG 566
V S+ S +WSK LE+QFR KID LSKVNHKNFVNLIGYCEE+EPFTRM+VFEY+PNG
Sbjct: 382 VAFVSITSSKNWSKTLEAQFRSKIDKLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNG 441
Query: 567 SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626
+LFEHLHI+EAEHLDW RLR+A G+AYCL+HMHQL PP+A L SS++YLT+DYAAK+
Sbjct: 442 TLFEHLHIKEAEHLDWGTRLRVATGVAYCLQHMHQLDPPMALIKLNSSAVYLTDDYAAKL 501
Query: 627 SDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLEN 685
SD SF N+ +A+T + ++ ESNVYS G +LFEM+TGR+ YS+E+ SLEN
Sbjct: 502 SDLSFSNDIASAETRA-----MDKPLATPESNVYSLGVLLFEMVTGRLPYSVEHKDSLEN 556
Query: 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745
WAS YL+ +QPLK+IVDP L S+QE+ LE++ +I +CVHPDP++RP+M+ ++ +L+EIT
Sbjct: 557 WASHYLEVDQPLKEIVDPILVSYQEDQLEQVASLITSCVHPDPQKRPTMKDVSERLREIT 616
Query: 746 AMEPDGATPKLSPLWWAELEILSSEA 771
+ P+ A PKLSPLWWAE+EI S+EA
Sbjct: 617 KITPESAVPKLSPLWWAEIEIASAEA 642
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356498966|ref|XP_003518316.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45840-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/675 (55%), Positives = 463/675 (68%), Gaps = 23/675 (3%)
Query: 113 QNLSLARCLNSE-GMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKV 171
Q SL L SE G+ALL RERVV DP GALS WS DG +++PCSWFGVEC G V
Sbjct: 20 QKQSLCSTLKSEEGLALLALRERVVSDPQGALSSWSGEDG---DIDPCSWFGVECFHGYV 76
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
V LNL+DLCL G LAPE+G+L+ +KSIILRNNSFFG IPKEI L++LE+LDLG+NNFSG
Sbjct: 77 VTLNLKDLCLEGTLAPEIGKLTHIKSIILRNNSFFGEIPKEILHLEKLEVLDLGYNNFSG 136
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLF 291
P D G+ SLTTLLLDNN YL ++PEL+ LK+ SE +E LT A +R
Sbjct: 137 LLPFDHGSMPSLTTLLLDNNYYLTNLTPELYKLKMNSEFHANEEQLTGATTRELFVCRCH 196
Query: 292 TWNKVQPGDNAFRRMLQQVTNGFEAKR------KASEPSSSSSIASSPEPLVSPSLSPSM 345
+ Q GD ++RR L +V N R + + S+S A S P P S
Sbjct: 197 LRHIGQHGDRSYRRQLLKVANDANTPRIQGNVNRGTLKQSASHFAFSLPPDFEPFSSSPS 256
Query: 346 SSLLSPSFSPSPSPSESPSVS--------SPLIIPPAPVNIPIVSSPPHLHSAPTSFAAS 397
S + S S SP S SP+++P ++ P + PP + AP+ S
Sbjct: 257 ESPSYSPGAVPLSYSPSPLPSPSSIFFTPSPVVLPTPGISSPANTLPPEFNWAPSPSPFS 316
Query: 398 TPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQ 457
S HH+V++ + G LIL+SAI F +S KVV VKPW TGLSGQLQ
Sbjct: 317 NQGNTDSS--NQIHHSVIIWFAVGGFSLLILVSAIIFACFQSRKVVAVKPWSTGLSGQLQ 374
Query: 458 KAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD 517
KAFV GVP LKR E+EAA E FSNIIGS DGTV YKGTLSSGVEIAV S++V + +
Sbjct: 375 KAFVKGVPSLKRGEIEAASEYFSNIIGSLPDGTV---YKGTLSSGVEIAVASSAVTTAKN 431
Query: 518 WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA 577
WSK++E+QFRKKI TLS+VNHKNFVNLIGYCEE++PF+RMMV EY+PNG+LFEHLHI+E
Sbjct: 432 WSKSMEAQFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVLEYAPNGTLFEHLHIREG 491
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637
E L+W MR+RIAMG+AYCLE+MH+L PPIAHRNLQSS IYLTEDYAAKISD S WN+
Sbjct: 492 EELNWTMRMRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCD 551
Query: 638 AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
K GSA + LETS+ D + NVYSFG +LFE+ITGRI + N L +WA+EY++ + L
Sbjct: 552 TKNGSATTQFLETSSADTKDNVYSFGIVLFELITGRIPLAGNNELLADWAAEYVRWGKSL 611
Query: 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLS 757
+D+VDP LKS QE +EE VI+NCV PDP++RP+M+ + ++LKEITAM PDGA PK S
Sbjct: 612 RDVVDPRLKSLQEEEIEEWSEVIRNCVQPDPEKRPTMKEVTSRLKEITAMGPDGANPKAS 671
Query: 758 PLWWAELEILSSEAS 772
PLWWAE+ I S+++S
Sbjct: 672 PLWWAEMAITSTDSS 686
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541803|ref|XP_003539362.1| PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/623 (57%), Positives = 448/623 (71%), Gaps = 31/623 (4%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
V NL+DLCL G+LAPE+G+L +KSII RNN F+G IPKEI +L++LE+LDLGFNNFS
Sbjct: 12 VFARNLKDLCLHGILAPEIGKLVHIKSIIFRNNYFYGDIPKEILQLEDLEVLDLGFNNFS 71
Query: 231 GPFP-SDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSG 289
G FP D + SLTTLLLDNN L ++PE++ LK SE+ VDE LT A +R +C S
Sbjct: 72 GQFPFHDLASYPSLTTLLLDNNDNLASLTPEVYELKTFSELHVDEEQLTGATTREACASI 131
Query: 290 LFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPL------------- 336
W+ Q GD A RR L Q N + E S S S+ P+
Sbjct: 132 TNNWHIGQHGDIASRRKLLQAANRSKRGDDEKETLSPSPFPSTLSPVLEPFSSSESPSDS 191
Query: 337 ------VSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIP-IVSSPPHLHS 389
+S S SPS+S+ SPSPSP +P+ P + PPA N P +V +PP +
Sbjct: 192 PISSPEISHSPSPSLSTFFF-ILSPSPSPEVAPT---PDLSPPA--NPPMVVFTPPQSNW 245
Query: 390 APTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWV 449
AS+ +Q + +K HTV++ + + G LIL+SAI F RS+KVVTVKPW
Sbjct: 246 GSMPSPASSSNQGNAYSSNTKQHTVIIWSTVGGFSFLILVSAIVFACFRSNKVVTVKPWA 305
Query: 450 TGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTS 509
TGLSGQLQKAFV+GVP LKR+ELE ACEDFSNIIGS +GT+ YKGTLSSGVEIAV S
Sbjct: 306 TGLSGQLQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTI---YKGTLSSGVEIAVAS 362
Query: 510 TSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 569
++V S DWSK +E+QFRKKI+ LS+VNHKNFVNLIGYCEE++PFTRMMVFEY+PNG+LF
Sbjct: 363 SAVTSSQDWSKKMETQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLF 422
Query: 570 EHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629
EHLHI+EAE LDW MR+RIA+G+AYCLEH+HQLTPPIA+RN+ SSS+YLTEDYAAK+SD
Sbjct: 423 EHLHIREAEQLDWGMRMRIAVGIAYCLEHLHQLTPPIAYRNILSSSMYLTEDYAAKLSDL 482
Query: 630 SFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689
S W + + K GS A +LLET++ +++NVYSFG +LFE+ITGRI +++ENG E+WA+E
Sbjct: 483 SLWTDIVSTKKGSEAPQLLETASAYIKANVYSFGVLLFELITGRIPFAMENGLFEDWAAE 542
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
Y+KG QPLKD+VD +L S Q N +E+ VI +CVH DP++RP+MR + AKLKEITAM P
Sbjct: 543 YMKG-QPLKDLVDTSLNSLQANEIEKWEEVINSCVHQDPEKRPTMREVTAKLKEITAMGP 601
Query: 750 DGATPKLSPLWWAELEILSSEAS 772
DGATPK SPLWWAE+EI+ S+ S
Sbjct: 602 DGATPKASPLWWAEIEIMPSDLS 624
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460929|ref|XP_004148196.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/695 (50%), Positives = 464/695 (66%), Gaps = 30/695 (4%)
Query: 86 LGMNQPCRFHRLRLNMAALTLVML-LFLQNLSLARCLNSEGMALLRFRERVVRDPFGALS 144
+G Q FHR RL + V++ L Q+ L+ LN EG+ LL+FRERVV DPFG LS
Sbjct: 1 MGKVQNLSFHRFRLRIGVYGFVVISLLFQSFHLSWSLNEEGLTLLKFRERVVNDPFGVLS 60
Query: 145 KWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS 204
W+D+ +++NPC WFGVECSDGKVV LNL+DLCL G L PEL L +KSI LRNNS
Sbjct: 61 NWNDHK---EDINPCFWFGVECSDGKVVSLNLKDLCLEGTLTPELKNLVHIKSINLRNNS 117
Query: 205 FFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVL 264
F GTIP+ +G L+ELE+LDLG+NNF GP PSD G++ SL LLLDNN+ L +SPE++ L
Sbjct: 118 FTGTIPQGLGGLEELEVLDLGYNNFCGPLPSDLGSNLSLGILLLDNNKDLRSLSPEIYQL 177
Query: 265 KVISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPS 324
+++SE QVDE+ L+N A + CN + + VQ D+ RR L+ A ++ +
Sbjct: 178 QLLSEFQVDENQLSNTAEGSLCNKESMSCDAVQVKDSRGRRELR-------ASASQAQLT 230
Query: 325 SSSSIASSPEPLVSPSLSPSMSS-----------LLSPSFSPSPSPSESPSVSSPLIIPP 373
+A PL PS S S S P P S S+ PP
Sbjct: 231 IQGRVAEVVVPLTPPSPSGGNSDRPPSNSPPPSPPAGAQGSQPPPPGTGISTSNNATSPP 290
Query: 374 APVNIPIVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIG 433
P +PP +AP + PS + K+K +V+ +G ++ A+G
Sbjct: 291 PSFKAPSEKTPP---AAPEGLPSPQPSSKQQG-GKNKSSVGVVVGVSVGAAVFVIALAVG 346
Query: 434 FFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGT 493
++ ++K TVKPW TGLSGQLQKAFVTGVPKLKRSELE +CEDFSN+IG +G
Sbjct: 347 IYLWTNNKA-TVKPWATGLSGQLQKAFVTGVPKLKRSELEVSCEDFSNVIGY---SPIGP 402
Query: 494 VYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553
VYKGTLSSGVEIAV SVKS DWS LE+QFRKKIDTLSK+NHKNFVNLIGYCEE+EP
Sbjct: 403 VYKGTLSSGVEIAVNIISVKSSKDWSMALEAQFRKKIDTLSKINHKNFVNLIGYCEEEEP 462
Query: 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
F+RMMVFEY+PNG++FEHLH +E EHL+W MR+RI MGMAY LE++H+ + P+ H NL S
Sbjct: 463 FSRMMVFEYAPNGTVFEHLHDEEFEHLNWRMRMRIVMGMAYSLEYLHEQSAPLIHLNLTS 522
Query: 614 SSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 673
S++ LTEDYAAKI++ S N A + + LL TS+ ES +YSFG +L E++TGR
Sbjct: 523 SAVNLTEDYAAKIAECSLQNKIVANERNCTSGHLLNTSSGGPESQIYSFGLVLLELMTGR 582
Query: 674 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
I +S +NG+LE WA +YLK ++PLK+++DPTL SFQE LE++ ++++C+H +P+QRP+
Sbjct: 583 IPHSAQNGTLEGWAIQYLKLDKPLKELIDPTLTSFQEEQLEQIGQLLRSCLHSNPEQRPT 642
Query: 734 MRGIAAKLKEITAMEPDGATPKLSPLWWAELEILS 768
M+ I ++L+ IT + PD A P+LSPLWWAELEI S
Sbjct: 643 MKLITSRLRLITGITPDEAIPRLSPLWWAELEIAS 677
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499209|ref|XP_003518434.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/680 (53%), Positives = 461/680 (67%), Gaps = 55/680 (8%)
Query: 99 LNMAALTLVMLLFLQNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNP 158
L++A + + LQ L L LN EG ALL+ R+R+V DPFGALS W D++ +V+P
Sbjct: 13 LSIAFRFVAVFFLLQKLGLCCSLNEEGNALLKLRQRIVSDPFGALSNWIDDEV---SVDP 69
Query: 159 CSWFGVECSDGKVVI-LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELK 217
C+WFGVECSDG+VV+ LNL+DLCLGG L PEL +L +KSIILRNNSF G IP+ EL+
Sbjct: 70 CNWFGVECSDGRVVVALNLKDLCLGGTLGPELVKLVNIKSIILRNNSFSGIIPEGFVELE 129
Query: 218 ELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWL 277
ELE+LDLG+N FSG P+D + SL LLLDNN +L G SPE++ L+++SE QVDE+ L
Sbjct: 130 ELEVLDLGYNYFSGHLPADLRSDISLAILLLDNNDFLVGFSPEINELRMLSECQVDENKL 189
Query: 278 TNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLV 337
TNAA +C + TWN Q + R +LQQ K K + P
Sbjct: 190 TNAAKMPACTKRVTTWNIDQ--GKSTRGLLQQ-------KAKPRTNQGHFYRVADPPVKS 240
Query: 338 SPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAAS 397
SP + S + P +P SP PPH S P S S
Sbjct: 241 SPPPPSASPSASAKPPGPKLAPHRKNGSDSP---------------PPH--STPGSGTLS 283
Query: 398 TPSQVHESLHKSKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQ 457
+ K HT +L G+IGG ++ S+IG ++C++ KV V+PW TGLSGQLQ
Sbjct: 284 KTES-----NSPKVHTFPILPGVIGGAVFLIFSSIGIYLCKT-KVANVRPWATGLSGQLQ 337
Query: 458 KAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD 517
KAFVTG KL+RS+LEAACEDFSN+IG+ +GT+YKGTLSSGVEIAV V S +
Sbjct: 338 KAFVTGAQKLRRSDLEAACEDFSNVIGT---SPIGTLYKGTLSSGVEIAVAFVPVTSSRN 394
Query: 518 WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA 577
WSK LE+QFR KIDTLSKVNHKNFVNLIGYCEE++PFTR++VFEY+PNG+LFEHLHI+EA
Sbjct: 395 WSKTLEAQFRSKIDTLSKVNHKNFVNLIGYCEEEDPFTRVLVFEYAPNGTLFEHLHIKEA 454
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637
EHLDW RLR+A GMAYCL+HMHQL PP+ L SS++YLT DYAAK+SD SF N+ T+
Sbjct: 455 EHLDWGTRLRVATGMAYCLQHMHQLDPPMTLIKLNSSAVYLTNDYAAKLSDLSFSNDITS 514
Query: 638 AKTGSAAMELLETSAVDL-----ESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYL 691
A E A+D+ ESNVYSFG +LFEM+TGR+ YS+E+ SLENWAS YL
Sbjct: 515 A----------EARAIDMPIATPESNVYSFGVLLFEMVTGRLPYSVEHRDSLENWASHYL 564
Query: 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751
+G+QPL ++VDP L S+QE+ LE++ +I +CVHPDP+QRP+M+ ++ +L+EIT + P+
Sbjct: 565 EGDQPLIEMVDPILVSYQEDQLEQVAALITSCVHPDPQQRPTMKDVSERLREITKITPES 624
Query: 752 ATPKLSPLWWAELEILSSEA 771
A PKLSPLWWAELEI S+EA
Sbjct: 625 AVPKLSPLWWAELEIASAEA 644
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 772 | ||||||
| TAIR|locus:2124102 | 678 | MRH1 "morphogenesis of root ha | 0.432 | 0.492 | 0.577 | 3.7e-131 | |
| TAIR|locus:2182915 | 553 | AT5G07150 [Arabidopsis thalian | 0.286 | 0.399 | 0.596 | 4.5e-121 | |
| TAIR|locus:2078436 | 499 | AT3G56050 [Arabidopsis thalian | 0.426 | 0.659 | 0.581 | 3.1e-108 | |
| TAIR|locus:2063146 | 489 | AT2G40270 [Arabidopsis thalian | 0.426 | 0.672 | 0.587 | 3.6e-105 | |
| TAIR|locus:2171233 | 484 | AT5G58540 [Arabidopsis thalian | 0.411 | 0.657 | 0.561 | 3.2e-97 | |
| TAIR|locus:2163056 | 664 | AT5G41180 [Arabidopsis thalian | 0.376 | 0.438 | 0.361 | 1.1e-74 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.341 | 0.445 | 0.322 | 9.3e-48 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.345 | 0.242 | 0.312 | 2.3e-46 | |
| TAIR|locus:2026097 | 628 | SERK2 "somatic embryogenesis r | 0.371 | 0.457 | 0.303 | 8.5e-45 | |
| TAIR|locus:2013021 | 625 | SERK1 "somatic embryogenesis r | 0.371 | 0.459 | 0.309 | 1.3e-44 |
| TAIR|locus:2124102 MRH1 "morphogenesis of root hair 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1045 (372.9 bits), Expect = 3.7e-131, Sum P(2) = 3.7e-131
Identities = 197/341 (57%), Positives = 261/341 (76%)
Query: 435 FVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTV 494
F CR V ++ PW TGLSGQLQKAFVTGVPKL RSELE ACEDFSNII +F DG TV
Sbjct: 342 FFCRKRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIETF-DGY--TV 398
Query: 495 YKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554
YKGTLSSGVEIAV ST++ +W++ +E +R+KIDTLS++NHKNFVNLIGYCEED+PF
Sbjct: 399 YKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPF 458
Query: 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614
RMMVFEY+PNG+LFEHLH +E EHLDW+ R+RI MG AYCL+HMH + PP+AH + SS
Sbjct: 459 NRMMVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHGMNPPMAHTDFNSS 518
Query: 615 SIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAV---DLESNVYSFGTILFEMIT 671
IYLT+DYAAK+S+ F + +L +TS + + E+NV+SFG ++ E+I+
Sbjct: 519 EIYLTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQTSLLLPPEPEANVHSFGVLMLEIIS 578
Query: 672 GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731
G++S+S E GS+E WAS+YL+ + L +++DP+LK+F+E LE + VI+ C+ + +QR
Sbjct: 579 GKLSFSDEYGSIEQWASKYLEKDD-LGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQR 637
Query: 732 PSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSSEAS 772
PSM+ +A +LK++ + P+ ATP+ SPLWWAELEILSSEA+
Sbjct: 638 PSMKDVAEQLKQVINITPEKATPRSSPLWWAELEILSSEAT 678
|
|
| TAIR|locus:2182915 AT5G07150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 703 (252.5 bits), Expect = 4.5e-121, Sum P(3) = 4.5e-121
Identities = 145/243 (59%), Positives = 176/243 (72%)
Query: 434 FFVCRSSKVVTVKPW-VTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVG 492
FF + KV +KPW TG SGQLQ TGVPKLK +ELE ACEDFSNIIGS S
Sbjct: 250 FFFLWNQKVKLIKPWGETGSSGQLQDVVTTGVPKLKLAELETACEDFSNIIGSTSSDA-- 307
Query: 493 TVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE 552
T+YKGTLS+G EIAV + + S DWS++ E+QF++K LS+VNHKNF+N+IGYC EDE
Sbjct: 308 TIYKGTLSTGSEIAVLAVASGSLQDWSEDHETQFQEK--RLSQVNHKNFLNVIGYCHEDE 365
Query: 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNL 611
PF RM+VFEY+PNGSLFEHLH Q+AEHLDW MRLRI MG+AYC+EHMH L P PI+H NL
Sbjct: 366 PFNRMLVFEYAPNGSLFEHLHDQDAEHLDWPMRLRIVMGIAYCMEHMHNLNPKPISHTNL 425
Query: 612 QSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 671
SSS+YL DYAAK+SDF+F L ++ +D +NV SFG +L E+IT
Sbjct: 426 NSSSVYLATDYAAKVSDFTF----------------LSSTPLDPMTNVSSFGALLQEIIT 469
Query: 672 GRI 674
G+I
Sbjct: 470 GKI 472
|
|
| TAIR|locus:2078436 AT3G56050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1044 (372.6 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 197/339 (58%), Positives = 261/339 (76%)
Query: 434 FFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGT 493
FF ++ K +V PW TGLSGQLQK F+TGVPKLKRSE+EAACEDFSN+IGS +GT
Sbjct: 167 FFKSKAGK--SVNPWRTGLSGQLQKVFITGVPKLKRSEIEAACEDFSNVIGSCP---IGT 221
Query: 494 VYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553
++KGTLSSGVEIAV S + S +W+ N+E QFRKKI+ LSK+NHKNFVNL+GYCEE+EP
Sbjct: 222 LFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEMLSKINHKNFVNLLGYCEEEEP 281
Query: 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
FTR++VFEY+ NG++FEHLH +E+EHLDW MRLRIAMG+AYCL+HMH L PPI H NL S
Sbjct: 282 FTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHGLKPPIVHSNLLS 341
Query: 614 SSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMIT 671
SS+ LTEDYA KI+DF+F ++T S+ L++T S E NV+SFG +LFE++T
Sbjct: 342 SSVQLTEDYAVKIADFNFGYLKGPSETESSTNALIDTNISETTQEDNVHSFGLLLFELMT 401
Query: 672 GRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQ 730
G++ S++ G S++ + +L+G+ L+++VDPT++SF E + E + VIK+C+ D KQ
Sbjct: 402 GKLPESVQKGDSIDTGLAVFLRGKT-LREMVDPTIESFDEKI-ENIGEVIKSCIRADAKQ 459
Query: 731 RPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSS 769
RP M+ + +L+EIT + PD PKLSPLWWAELE+LS+
Sbjct: 460 RPIMKEVTGRLREITGLSPDDTIPKLSPLWWAELEVLST 498
|
|
| TAIR|locus:2063146 AT2G40270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 198/337 (58%), Positives = 255/337 (75%)
Query: 434 FFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGT 493
FF ++ K TV PW TGLSGQLQK FVTG+P LKRSE+EAACEDFSN+IGS +G
Sbjct: 159 FFTSKAGK--TVNPWRTGLSGQLQKVFVTGIPVLKRSEIEAACEDFSNVIGSCP---IGK 213
Query: 494 VYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553
++KGTLSSGVEIAV S + + DW + E FRKKI+ LSK+NHKNF NL+GYCEE EP
Sbjct: 214 LFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKKIEMLSKINHKNFANLLGYCEEKEP 273
Query: 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
FTR+++FEY+PNGSLFEHLH +E+EHLDW MRLRIAMG+AYCL+HMHQL PPIAH NL S
Sbjct: 274 FTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIAMGLAYCLDHMHQLNPPIAHTNLVS 333
Query: 614 SSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR 673
SS+ LTEDYA K+SDFSF ++ T + + SA++ E N+YSFG +LFEMITG+
Sbjct: 334 SSLQLTEDYAVKVSDFSFGSSETETNINNNTVIDTHISALNPEDNIYSFGLLLFEMITGK 393
Query: 674 ISYSIEN-GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
+ S+ S+++ ++L+GE L +VDPTL+S+ + E + VIK+C+ DPK+RP
Sbjct: 394 LIESVNKPDSVDSSLVDFLRGET-LAKMVDPTLESYDAKI-ENIGEVIKSCLRTDPKERP 451
Query: 733 SMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSS 769
+M+ + L+EIT + P+ ATPKLSPLWWAELE+LS+
Sbjct: 452 TMQEVTGWLREITGLSPNDATPKLSPLWWAELEVLST 488
|
|
| TAIR|locus:2171233 AT5G58540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 187/333 (56%), Positives = 245/333 (73%)
Query: 440 SKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL 499
++ + +KPW SGQL+ +T VP+L+ SEL+AACEDFSN+IGSFSDGT+ YKGTL
Sbjct: 167 TRKIPIKPWTN--SGQLRDDLITDVPRLQLSELQAACEDFSNVIGSFSDGTI---YKGTL 221
Query: 500 SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559
S+G EIAV S SR+DWS +++Q +K+ LSKV+HKNF+N+IGYC E+EPF RM+V
Sbjct: 222 STGAEIAVVSIVAGSRSDWSTTMDTQLLQKMHNLSKVDHKNFLNVIGYCLEEEPFKRMLV 281
Query: 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619
FEY+PNGSL EHLH Q EHLDW RLRI MG+AYCLEHMH L PPI NL SSS+YLT
Sbjct: 282 FEYAPNGSLSEHLHSQYVEHLDWPTRLRIVMGIAYCLEHMHNLNPPILLSNLDSSSVYLT 341
Query: 620 EDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679
ED AAK+SDFS N+ +K GS++ LLE S +D +NV++FG +LFE+I+G++ +
Sbjct: 342 EDNAAKVSDFSVINSIFPSKEGSSSKNLLEPSLLDPHTNVFNFGAVLFEIISGKLP---D 398
Query: 680 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
S+ L +P +DIVDPTLK+FQENV+E LL V++ C++P QRP+MR +
Sbjct: 399 PDSM-------LLEPKPTRDIVDPTLKTFQENVVERLLEVVRQCLNPYSDQRPTMREVVV 451
Query: 740 KLKEITAMEPDGATPKLSPLWWAELEILSSEAS 772
KL+EIT +E D A P+LSP WW ELEI+S+E +
Sbjct: 452 KLREITGIEADAAMPRLSPRWWTELEIISTEGN 484
|
|
| TAIR|locus:2163056 AT5G41180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 1.1e-74, Sum P(2) = 1.1e-74
Identities = 114/315 (36%), Positives = 178/315 (56%)
Query: 436 VCRSSKVVTVKPWVTGLSGQ------LQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDG 489
+C+ + + V PW S + + + V + R ELE ACEDFSNII S ++
Sbjct: 302 LCKIKRSLIV-PWKKSASEKEKFTVYVDSEMLKDVSRYTRQELEVACEDFSNIIDSSAES 360
Query: 490 TVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549
+ YKGT+ G EIAV S VK +W+ LE F++++ L+++NH+N L+GYC+
Sbjct: 361 QI---YKGTIKGGTEIAVISLCVKEE-NWTGYLELNFQREVAALARLNHENAGKLLGYCK 416
Query: 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAH 608
E PFTRM+VFEY+ NG+L++HLH + + WA R++I +G+A L+++H +L PP
Sbjct: 417 ESTPFTRMLVFEYASNGTLYDHLHYADGSLVSWAKRMKIVIGIARGLKYLHTELHPPFTV 476
Query: 609 RNLQSSSIYLTEDYAAKISDFSFW---------NNTTAAKTGSAAM--ELLETSAVDLES 657
L S+++YLTED+ K+ DF W N G+ + +E +DL+
Sbjct: 477 SELSSTAVYLTEDFTPKLVDFECWKIIQVRSEKNLKNICNEGAICVLPNAMEHRDMDLQG 536
Query: 658 NVYSFGTILFEMITGRISYSIENGSLENWASEY-LKGEQPLKDIVDPTLKSFQENVLEEL 716
N+YSFG +L E+++GR SY + G L W E L + +VDP LK F++ LE +
Sbjct: 537 NIYSFGILLLEIVSGRPSYCQDRGCLVEWVREKNLGAPDVMASLVDPELKHFKQKELEAV 596
Query: 717 LVVIKNCVHPDPKQR 731
V C++ D ++
Sbjct: 597 CEVASQCLNLDQNEK 611
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 9.3e-48, Sum P(2) = 9.3e-48
Identities = 95/295 (32%), Positives = 158/295 (53%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 530
+LE E+ +IIG G GTVYK + G A+ K ++ + F +++
Sbjct: 302 KLEMLNEE--HIIGC---GGFGTVYKLAMDDGKVFAL-----KRILKLNEGFDRFFEREL 351
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM 590
+ L + H+ VNL GYC + P +++++++Y P GSL E LH++ E LDW R+ I +
Sbjct: 352 EILGSIKHRYLVNLRGYC--NSPTSKLLLYDYLPGGSLDEALHVERGEQLDWDSRVNIII 409
Query: 591 GMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---------NTTAAKT 640
G A L ++H +P I HR+++SS+I L + A++SDF T A T
Sbjct: 410 GAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGT 469
Query: 641 -GSAAMELLETSAVDLESNVYSFGTILFEMITGR----ISYSIENG-SLENWASEYLKGE 694
G A E +++ +++VYSFG ++ E+++G+ S+ IE G ++ W ++L E
Sbjct: 470 FGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASF-IEKGLNVVGWL-KFLISE 527
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
+ +DIVDP + Q L+ LL + CV P P++RP+M + +L E M P
Sbjct: 528 KRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVV-QLLESEVMTP 581
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 91/291 (31%), Positives = 150/291 (51%)
Query: 471 ELEAACEDF--SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 528
+L AA ++F S ++G G GTVYK L +G +AV + + N+++ FR
Sbjct: 796 DLVAATDNFDESFVVGR---GACGTVYKAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRA 852
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
+I TL + H+N V L G+C + ++++EY P GSL E LH +LDW+ R +I
Sbjct: 853 EILTLGNIRHRNIVKLHGFCNHQG--SNLLLYEYMPKGSLGEILHDPSC-NLDWSKRFKI 909
Query: 589 AMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------WNNTTAAKT 640
A+G A L ++H P I HR+++S++I L + + A + DF + + +A
Sbjct: 910 ALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPHSKSMSAIA 969
Query: 641 GS---AAMELLETSAVDLESNVYSFGTILFEMITGR--ISYSIENGSLENWASEYLKGEQ 695
GS A E T V +S++YS+G +L E++TG+ + + G + NW Y++ +
Sbjct: 970 GSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQPIDQGGDVVNWVRSYIRRDA 1029
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKN---CVHPDPKQRPSMRGIAAKLKE 743
++D L E ++ +L V+K C P RPSMR + L E
Sbjct: 1030 LSSGVLDARLTLEDERIVSHMLTVLKIALLCTSVSPVARPSMRQVVLMLIE 1080
|
|
| TAIR|locus:2026097 SERK2 "somatic embryogenesis receptor-like kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 331 (121.6 bits), Expect = 8.5e-45, Sum P(2) = 8.5e-45
Identities = 100/330 (30%), Positives = 169/330 (51%)
Query: 466 KLKR---SELEAACEDFSN--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK 520
+LKR EL+ A + FSN I+G G G VYKG L+ G +AV + + + +
Sbjct: 289 QLKRFSLRELQVATDSFSNKNILGR---GGFGKVYKGRLADGTLVAVK----RLKEERTP 341
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 580
E QF+ +++ +S H+N + L G+C P R++V+ Y NGS+ L + L
Sbjct: 342 GGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPPSQL 399
Query: 581 D--WAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSF------ 631
W++R +IA+G A L ++H P I HR++++++I L E++ A + DF
Sbjct: 400 PLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDY 459
Query: 632 --WNNTTAAK--TGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENG 681
+ TTA + G A E L T +++V+ +G +L E+ITG+ ++ + ++
Sbjct: 460 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV 519
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
L +W LK E+ L+ +VDP L+S + E +E+L+ V C P +RP M +
Sbjct: 520 MLLDWVKGLLK-EKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEV--- 575
Query: 741 LKEITAMEPDGATPKLSPLWWAELEILSSE 770
+ +E DG K W ++E+L E
Sbjct: 576 ---VRMLEGDGLAEKWDE--WQKVEVLRQE 600
|
|
| TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 339 (124.4 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 102/330 (30%), Positives = 169/330 (51%)
Query: 466 KLKR---SELEAACEDFSN--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK 520
+LKR EL+ A + FSN I+G G G VYKG L+ G +AV + + + +
Sbjct: 286 QLKRFSLRELQVASDGFSNKNILGR---GGFGKVYKGRLADGTLVAVK----RLKEERTP 338
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH- 579
E QF+ +++ +S H+N + L G+C P R++V+ Y NGS+ L +
Sbjct: 339 GGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPPSQP 396
Query: 580 -LDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSF------ 631
LDW R RIA+G A L ++H P I HR++++++I L E++ A + DF
Sbjct: 397 PLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 456
Query: 632 --WNNTTAAK--TGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENG 681
+ TTA + G A E L T +++V+ +G +L E+ITG+ ++ + ++
Sbjct: 457 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV 516
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
L +W LK E+ L+ +VDP L++ ++E LE+++ V C P +RP M +
Sbjct: 517 MLLDWVKGLLK-EKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEV--- 572
Query: 741 LKEITAMEPDGATPKLSPLWWAELEILSSE 770
+ +E DG K W ++EIL E
Sbjct: 573 ---VRMLEGDGLAEKWDE--WQKVEILREE 597
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| C0LGU7 | Y5458_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.4300 | 0.8082 | 0.8978 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 772 | |||
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 6e-32 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-30 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-29 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 5e-29 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 9e-28 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-26 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-25 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-21 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-21 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 7e-21 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-20 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-18 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-17 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 6e-17 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-16 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 6e-16 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-15 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-15 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-14 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-14 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 4e-14 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 7e-14 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-13 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 2e-13 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 3e-13 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 3e-13 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 3e-13 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 4e-13 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 4e-13 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-12 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-12 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-12 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-12 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 3e-12 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-12 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-12 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 6e-12 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-11 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-11 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-11 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-11 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-11 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 2e-11 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 2e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 2e-11 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-11 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-11 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-11 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 5e-11 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 6e-11 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 7e-11 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 7e-11 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 8e-11 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 8e-11 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 9e-11 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 1e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 1e-10 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 1e-10 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-10 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-10 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 3e-10 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 3e-10 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 4e-10 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 6e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 7e-10 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 8e-10 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 1e-09 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 1e-09 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 1e-09 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-09 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 2e-09 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 2e-09 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-09 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-09 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 7e-09 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 7e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-09 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 1e-08 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-08 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 1e-08 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-08 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-08 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 2e-08 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 3e-08 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 4e-08 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-08 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 5e-08 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 9e-08 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 9e-08 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 1e-07 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-07 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-07 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-07 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 4e-07 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 5e-07 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 5e-07 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-07 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 6e-07 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 7e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 9e-07 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 1e-06 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-06 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-06 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-06 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 2e-06 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 2e-06 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-06 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 3e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 4e-06 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 4e-06 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-06 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 5e-06 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-06 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 6e-06 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-06 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 9e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 9e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-05 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 1e-05 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 1e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-05 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-05 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-05 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-05 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-05 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-05 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 3e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 4e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 4e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-05 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 6e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 8e-05 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 1e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-04 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 1e-04 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-04 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 1e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-04 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 2e-04 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-04 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 4e-04 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 4e-04 | |
| PLN02217 | 670 | PLN02217, PLN02217, probable pectinesterase/pectin | 5e-04 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-04 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 5e-04 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 5e-04 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 6e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 6e-04 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 7e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 8e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 9e-04 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 0.001 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.001 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 0.001 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 0.001 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 0.001 | |
| pfam05687 | 151 | pfam05687, DUF822, Plant protein of unknown functi | 0.002 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.002 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 0.002 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 0.002 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 0.002 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 0.003 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 0.003 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 0.004 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 0.004 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 0.004 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 6e-32
Identities = 79/281 (28%), Positives = 123/281 (43%), Gaps = 43/281 (15%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVN 537
+G G G VYKGTL E T +VK+ + S+ +F ++ + K++
Sbjct: 3 LGKKLGE---GAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS 59
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR----IAMGMA 593
H N V L+G C + EP +V EY P G L + L + E L L+ IA GM
Sbjct: 60 HPNIVRLLGVCTQGEPL--YIVTEYMPGGDLLDFLR-KHGEKLTLKDLLQMALQIAKGME 116
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS-----FWNNTTAAKTGSA----- 643
Y LE + HR+L + + +TE+ KISDF + ++ + G
Sbjct: 117 Y-LESKN-----FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKW 170
Query: 644 -AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLK-GEQPLKDI 700
A E L+ +S+V+SFG +L+E+ T G Y + E L+ G + +
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEE---VLELLEDGYRLPR-- 225
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
P EN +EL ++ C DP+ RP+ + L
Sbjct: 226 --P------ENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 81/288 (28%), Positives = 117/288 (40%), Gaps = 52/288 (18%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHK 539
+G G G VYKG L VK+ + D S+ F K+ + K+ H
Sbjct: 1 KKLGE---GAFGEVYKGKLKGKDGKTTEVA-VKTLKEDASEEERKDFLKEARVMKKLGHP 56
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-------HIQEAEHLDWAMRLR----I 588
N V L+G C E+EP +V EY G L ++L E L L I
Sbjct: 57 NVVRLLGVCTEEEPL--YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI 114
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFW--NNTTAAKTGSA- 643
A GM Y L HR+L + + + ED KISDF S ++ K
Sbjct: 115 AKGMEY-LASKK-----FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGK 168
Query: 644 ------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYL-KGE 694
A E L+ +S+V+SFG +L+E+ T G Y + N EYL KG
Sbjct: 169 LPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----EEVLEYLRKGY 224
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
+ K P E +EL ++ +C DP+ RP+ + +L+
Sbjct: 225 RLPK----P------EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 5e-29
Identities = 77/284 (27%), Positives = 118/284 (41%), Gaps = 49/284 (17%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVN 537
+G G G VYKGTL + +VK+ + D S+ +F ++ + K++
Sbjct: 3 LGKKLGE---GAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD 59
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR----IAMGMA 593
H N V L+G C E+EP M+V EY P G L ++L + L + L IA GM
Sbjct: 60 HPNIVKLLGVCTEEEPL--MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGME 117
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---FWNNTTAAKTGSA------- 643
Y LE HR+L + + + E+ KISDF + K
Sbjct: 118 Y-LESK-----NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWM 171
Query: 644 AMELLE----TSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGEQPL 697
A E L+ TS D V+SFG +L+E+ T G Y + N + + + + +P
Sbjct: 172 APESLKEGKFTSKSD----VWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKP- 226
Query: 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
N EL ++ C DP+ RP+ + L
Sbjct: 227 ------------PNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 5e-29
Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVN 537
+G G G VYKG L +VK+ + D S+ +F ++ + K++
Sbjct: 3 LGKKLGE---GAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD 59
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGM 592
H N V L+G C E+EP +V EY G L +L + ++ L +A L+IA GM
Sbjct: 60 HPNVVKLLGVCTEEEPL--YIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFA--LQIARGM 115
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---FWNNTTAAKTGSA------ 643
Y LE + HR+L + + + E+ KISDF + +
Sbjct: 116 EY-LESKN-----FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRW 169
Query: 644 -AMELLE----TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697
A E L+ TS D V+SFG +L+E+ T G Y + E+ L
Sbjct: 170 MAPESLKEGKFTSKSD----VWSFGVLLWEIFTLGEQPY------------PGMSNEEVL 213
Query: 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ + + N EL ++ C DP+ RP+ + L
Sbjct: 214 EYLKNGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-28
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 78/272 (28%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKN 540
+G G GTVY +G ++A+ K + + S +L + ++I+ L K+NH N
Sbjct: 1 LGE---GGFGTVYLARDKKTGKKVAI-----KIIKKEDSSSLLEELLREIEILKKLNHPN 52
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
V L G E++ +V EY GSL + L + L LRI + + LE++H
Sbjct: 53 IVKLYGVFEDENHL--YLVMEYCEGGSLKDLLK-ENEGKLSEDEILRILLQILEGLEYLH 109
Query: 601 QLTPPIAHRNLQSSSIYLTEDYA-AKISDFSFW------NNTTAAKTGS---AAMELLE- 649
I HR+L+ +I L D K++DF + G+ A E+L
Sbjct: 110 SN--GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLG 167
Query: 650 ----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
+ D ++S G IL+E+ LKD+
Sbjct: 168 KGYYSEKSD----IWSLGVILYEL-------------------------PELKDL----- 193
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
I+ + DP++RPS + I
Sbjct: 194 --------------IRKMLQKDPEKRPSAKEI 211
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 37/269 (13%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNH 538
+G G+ G VY +G +A+ K + K + ++I L K+ H
Sbjct: 5 EKLGE---GSFGKVYLARDKKTGKLVAI-----KVIKKKKIKKDRERILREIKILKKLKH 56
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCL 596
N V L E+++ +V EY G LF+ L + D A +I + Y
Sbjct: 57 PNIVRLYDVFEDEDKLY--LVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYL- 113
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT--GS---AAMELL 648
H I HR+L+ +I L ED K++DF + T G+ A E+L
Sbjct: 114 -HSKG----IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVL 168
Query: 649 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708
+++S G IL+E++TG+ + ++ + K +P P
Sbjct: 169 LGKGYGKAVDIWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKP-----KPPFPPP 219
Query: 709 QENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ ++ E +I+ + DP++R +
Sbjct: 220 EWDISPEAKDLIRKLLVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
+GS G+ GTVYK +G +AV +S + R++I L +++H N
Sbjct: 6 KLGS---GSFGTVYKAKHKGTGKIVAVKILKKRSE---KSKKDQTARREIRILRRLSHPN 59
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
V LI E+ + +V EY G LF++L L +IA+ + LE++H
Sbjct: 60 IVRLIDAFEDKD--HLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLH 115
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKT--GS---AAMELL--- 648
I HR+L+ +I L E+ KI+DF ++++ T G+ A E+L
Sbjct: 116 SN--GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGG 173
Query: 649 --ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
VD V+S G IL+E++TG+ +S EN + + G D +
Sbjct: 174 NGYGPKVD----VWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSG 229
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMR 735
S EE +IK C++ DP +RP+
Sbjct: 230 S------EEAKDLIKKCLNKDPSKRPTAE 252
|
Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 53/284 (18%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
IG G G V G G ++AV K D S + F + ++ +
Sbjct: 9 KLGATIGK---GEFGDVMLGDYR-GQKVAV-----KCLKDDSTAAQ-AFLAEASVMTTLR 58
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL------HIQEAEHLDWAMRLRIAMG 591
H N V L+G + P +V EY GSL ++L I A+ L +A+ + G
Sbjct: 59 HPNLVQLLGVVLQGNPL--YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALD--VCEG 114
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS------AAM 645
M Y LE + HR+L + ++ ++ED AK+SDF + + A
Sbjct: 115 MEY-LEEKN-----FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAP 168
Query: 646 ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
E L +S+V+SFG +L+E+ + GR+ Y PLKD+V
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYP----------------RIPLKDVVPHV 212
Query: 705 LKSFQ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
K ++ E E+ V+K+C DP +RP+ + + +L I
Sbjct: 213 EKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 60/272 (22%)
Query: 489 GTVGTVYKGT--LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 546
G G+V KG + SG E+ V ++K + + +F ++ +++++H V LIG
Sbjct: 6 GNFGSVVKGVYLMKSGKEVEVAVKTLK--QEHIAAGKKEFLREASVMAQLDHPCIVRLIG 63
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 602
C+ EP M+V E +P G L ++L I ++ + A ++AMGMAY LE H
Sbjct: 64 VCKG-EPL--MLVMELAPLGPLLKYLKKRREIPVSDLKELA--HQVAMGMAY-LESKH-- 115
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGSA------AMELLET 650
HR+L + ++ L + AKISDF ++ A T A E +
Sbjct: 116 ---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172
Query: 651 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710
+S+V+S+G L+E SY G +P ++ + + E
Sbjct: 173 GKFSSKSDVWSYGVTLWEA----FSY----------------GAKPYGEMKGAEVIAMLE 212
Query: 711 NVL---------EELLVVIKNCVHPDPKQRPS 733
+ +E+ ++ +C P+ RP+
Sbjct: 213 SGERLPRPEECPQEIYSIMLSCWKYRPEDRPT 244
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 7e-21
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
++G G+ G+VY +G +AV S V+ D + LE+ ++I LS + H
Sbjct: 6 ELLGR---GSFGSVYLALDKDTGELMAVKS--VELSGDSEEELEA-LEREIRILSSLQHP 59
Query: 540 NFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLH----IQEAEHLDWAMRLRIAMGMAY 594
N V G E DE + +F EY GSL L + E +R +
Sbjct: 60 NIVRYYG-SERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV-----IRKYTRQ-ILE 112
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGSAA-----M 645
L ++H I HR+++ ++I + D K++DF + T TGS M
Sbjct: 113 GLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWM 170
Query: 646 --ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703
E++ ++++S G + EM TG+ +S L N + K
Sbjct: 171 APEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS----ELGNPMAAL------YKIGSSG 220
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
E++ EE ++ C+ DPK+RP+
Sbjct: 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 2e-20
Identities = 68/296 (22%), Positives = 116/296 (39%), Gaps = 50/296 (16%)
Query: 479 FSNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
F +G G G V ++G ++AV S + S F ++I+ L
Sbjct: 8 FIKQLGE---GHFGKVELCRYDPLGDNTGEQVAVKSL----NHSGEEQHRSDFEREIEIL 60
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR----IA 589
++H+N V G CE+ + ++ EY P+GSL ++L + ++ L I
Sbjct: 61 RTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQIC 119
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA------ 643
GM Y L HR+L + +I + + KISDF
Sbjct: 120 KGMDY-LGSQR-----YIHRDLAARNILVESEDLVKISDFGL---AKVLPEDKDYYYVKE 170
Query: 644 ---------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693
A E L TS S+V+SFG L+E+ T G S S L +G
Sbjct: 171 PGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA--QG 228
Query: 694 EQPLKDIVDPTLKSFQ-----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ + +++ LK + + +E+ ++K C +P+ RPS + + +
Sbjct: 229 QMIVTRLLE-LLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 2e-18
Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 62/289 (21%)
Query: 478 DFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
F + IG G G VYK +G E+A+ ++S+ K + +I L
Sbjct: 1 LFEILEKIGK---GGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKII-----NEIQILK 52
Query: 535 KVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEAEHLDWAMRLRI 588
K H N V G Y ++DE +V E+ GSL + L + E++ I
Sbjct: 53 KCKHPNIVKYYGSYLKKDEL---WIVMEFCSGGSLKDLLKSTNQTLTESQ---------I 100
Query: 589 AMGMAYC------LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTAAK 639
A C LE++H I HR++++++I LT D K+ DF ++T A
Sbjct: 101 A---YVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN 155
Query: 640 T--GS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
T G+ A E++ D +++++S G E+ G+ YS E ++ A +
Sbjct: 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS-ELPPMK--ALFKIATN 212
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
P P L++ E +E +K C+ +P++RP+ A +L +
Sbjct: 213 GP------PGLRN-PEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 83.3 bits (206), Expect = 1e-17
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 41/270 (15%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G VYKG L E+AV + R+ +L+ +F ++ + L + +H N V LIG C
Sbjct: 6 GNFGDVYKGVLKGNTEVAVKTC----RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAE---HLDWAMRLRIAMGMAYCLEHMHQLTPP 605
+ +P +V E P GSL L ++ M L A GM Y LE + +
Sbjct: 62 VQKQPI--YIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEY-LESKNCI--- 115
Query: 606 IAHRNLQSSSIYLTEDYAAKISDFSFWNN------TTAAKTGS-----AAMELLETSAVD 654
HR+L + + + E+ KISDF T + A E L
Sbjct: 116 --HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYT 173
Query: 655 LESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENV 712
ES+V+S+G +L+E + G Y ++ Q ++ ++ + +
Sbjct: 174 SESDVWSYGILLWETFSLGDTPYP-------GMSN------QQTRERIESGYRMPAPQLC 220
Query: 713 LEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
EE+ ++ C DP+ RPS I +L+
Sbjct: 221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 6e-17
Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 45/263 (17%)
Query: 488 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V+ GT + ++AV K+ + + E+ F ++ + K+ H V L
Sbjct: 16 AGQFGEVWMGTWNGTTKVAV-----KTLKPGTMSPEA-FLQEAQIMKKLRHDKLVQLYAV 69
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLT 603
C E+EP +V EY GSL + L E + L M +IA GMAY LE + +
Sbjct: 70 CSEEEPI--YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAY-LESRNYI- 125
Query: 604 PPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTGS------AAMELLETSAV 653
HR+L + +I + E+ KI+DF ++ A+ G+ A E
Sbjct: 126 ----HRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRF 181
Query: 654 DLESNVYSFGTILFEMIT-GRISYSIENGS--LENWASEYLKGEQPLKDIVDPTLKSFQE 710
++S+V+SFG +L E++T GR+ Y LE Y + +P
Sbjct: 182 TIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-RMPRP-------------P 227
Query: 711 NVLEELLVVIKNCVHPDPKQRPS 733
N EEL ++ C DP++RP+
Sbjct: 228 NCPEELYDLMLQCWDKDPEERPT 250
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-16
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 44/289 (15%)
Query: 482 IIGSFSDGTVGTVYKGTLSSGV-EIAVTSTSVKSRADWSKN-LESQFRKKIDTLSKVNHK 539
+ +G G V+ G E +VK+ + + N F ++ + L+ H+
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 599
N V G C E +P +MVFEY +G L + L + MG L +
Sbjct: 69 NIVKFYGVCTEGDPP--IMVFEYMEHGDLNKFLR-SHGPDAAFLKSPDSPMG-ELTLSQL 124
Query: 600 HQLTPPIA------------HRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAA 644
Q+ IA HR+L + + + D KI DF + T + G
Sbjct: 125 LQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHT 184
Query: 645 M--------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEY-LKGE 694
M E + ES+V+SFG +L+E+ T G+ + Y L E
Sbjct: 185 MLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW-------------YGLSNE 231
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ ++ I L E+ ++ C DP+QR +++ I +L++
Sbjct: 232 EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 3e-16
Identities = 153/626 (24%), Positives = 245/626 (39%), Gaps = 112/626 (17%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+L+L L G + L L +IL +NS G IPK +G + L + L N+FSG
Sbjct: 360 VLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE 419
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGIS------PELHVLKVISEIQVDESWLTNAASRASC 286
PS+F + L + NN G I+ P L +L + +R
Sbjct: 420 LPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL---------------ARNKF 464
Query: 287 NSGL---FTWNKVQPGDNAFRRMLQQVTNGFEA-----KRKASEPSSSSSIA---SSPEP 335
GL F +++ D + + V + + K SE S I SS +
Sbjct: 465 FGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKK 524
Query: 336 LVSPSLSPS-MSSLLSPSFSPSPSPSESPSVSSPLI--IPP--------APVNIPIVSSP 384
LVS LS + +S + SFS P S+ + L IP VNI S
Sbjct: 525 LVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI----SH 580
Query: 385 PHLH-SAPTS--FAASTPSQVH-----------------ESLHKSKHHTVLVLAGIIGGL 424
HLH S P++ F A S V + + K+ + +G
Sbjct: 581 NHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYI-TCTLGAF 639
Query: 425 SLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDF----- 479
++ + A GF R + +K V G + F K+ +S D
Sbjct: 640 LVLALVAFGFVFIRGRNNLELKR-VENEDGTWELQFFDS--KVSKS---ITINDILSSLK 693
Query: 480 -SNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
N+I S G G YKG ++ +G++ V ++ S +I + K+
Sbjct: 694 EENVI---SRGKKGASYKGKSIKNGMQFVVKEI---------NDVNSIPSSEIADMGKLQ 741
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
H N V LIG C ++ ++ EY +L E L +L W R +IA+G+A L
Sbjct: 742 HPNIVKLIGLCRSEK--GAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKALR 794
Query: 598 HMH-QLTPPIAHRNLQSSSIYLTEDYAAKI----SDFSFWNNTTAAKTGSAAMELLETSA 652
+H + +P + NL I + + + + A E ET
Sbjct: 795 FLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKD 854
Query: 653 VDLESNVYSFGTILFEMITGRISYSIE---NGSLENWASEYLKGEQPLKDIVDPTLK--- 706
+ +S++Y FG IL E++TG+ E +GS+ WA Y + L +DP+++
Sbjct: 855 ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA-RYCYSDCHLDMWIDPSIRGDV 913
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRP 732
S +N + E++ + +C DP RP
Sbjct: 914 SVNQNEIVEVMNLALHCTATDPTARP 939
|
Length = 968 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 6e-16
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 43/272 (15%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543
G F D +G Y+G ++AV + A F + ++++ H N V
Sbjct: 17 GEFGDVMLGD-YRGN-----KVAVKCIKNDATA-------QAFLAEASVMTQLRHSNLVQ 63
Query: 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 603
L+G E++ +V EY GSL ++L + L L+ ++ + +E++
Sbjct: 64 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--A 120
Query: 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS------AAMELLETSAVDLES 657
HR+L + ++ ++ED AK+SDF ++ + A E L +S
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 658 NVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ----ENV 712
+V+SFG +L+E+ + GR+ Y PLKD+V K ++ +
Sbjct: 181 DVWSFGILLWEIYSFGRVPYP----------------RIPLKDVVPRVEKGYKMDAPDGC 224
Query: 713 LEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ V+K C H D RPS + +L+ I
Sbjct: 225 PPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 1e-15
Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 511 SVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 569
+VK+ + + + S ++K+I+ L + H+N V G C E ++ EY P GSL
Sbjct: 37 AVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLR 96
Query: 570 EHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626
++L + A+ L +A +I GMAY L H + HR+L + ++ L D KI
Sbjct: 97 DYLPKHKLNLAQLLLFAQ--QICEGMAY-LHSQHYI-----HRDLAARNVLLDNDRLVKI 148
Query: 627 SDFSFWNNTTAAKTGSA---------------AMELLETSAVDLESNVYSFGTILFEMIT 671
DF A G A+E L+ + S+V+SFG L+E++T
Sbjct: 149 GDFGL---AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205
Query: 672 GRISYSIENGSLENW--ASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDP 728
S E + L ++++ ++ +N +E+ +++KNC +
Sbjct: 206 HCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEA 265
Query: 729 KQRPSMRGIAAKLKEI 744
K RP+ R + LKE+
Sbjct: 266 KFRPTFRSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 78.2 bits (191), Expect = 3e-15
Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 29/275 (10%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-K 539
I+ +G+ G VY V + V + ++S +F ++I L+ +NH
Sbjct: 3 RILRKLGEGSFGEVYLARDRKLVALKVLAKKLES----KSKEVERFLREIQILASLNHPP 58
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEH 598
N V L + +++ +V EY GSL + L + L + L I + LE+
Sbjct: 59 NIVKLYDFFQDEGSL--YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDY-AAKISDF------------SFWNNTTAAKTGSAA- 644
+H I HR+++ +I L D K+ DF S + G+
Sbjct: 117 LHSK--GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGY 174
Query: 645 -----MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
+ L + S+++S G L+E++TG + E S + + E P
Sbjct: 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234
Query: 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
+ P S E + + ++K + DPK R S
Sbjct: 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269
|
Length = 384 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 1e-14
Identities = 81/279 (29%), Positives = 113/279 (40%), Gaps = 49/279 (17%)
Query: 488 DGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 545
DG+ G V +G S G I V +KS D ++ F K+ + ++H+N + L
Sbjct: 5 DGSFGVVRRGEWSTSGGKVIPVAVKCLKS--DKLSDIMDDFLKEAAIMHSLDHENLIRLY 62
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL------DWAMRLRIAMGMAYCLEHM 599
G P MMV E +P GSL + L H D+A+ +IA GM Y LE
Sbjct: 63 GVVL-THPL--MMVTELAPLGSLLDRLRKDALGHFLISTLCDYAV--QIANGMRY-LESK 116
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAKTGSA--AMEL 647
HR+L + +I L D KI DF + K A A E
Sbjct: 117 R-----FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES 171
Query: 648 LETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
L T S+V+ FG L+EM T G E WA L G Q LK I D +
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEMFTYGE----------EPWAG--LSGSQILKKI-DKEGE 218
Query: 707 SFQ--ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ E +++ V+ C +P RP+ + L E
Sbjct: 219 RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 73.4 bits (180), Expect = 3e-14
Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 50/291 (17%)
Query: 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
N +GS G G VY+GT SG I V +++ A + + +F K+ +S
Sbjct: 1 NFLGS---GAFGEVYEGTATDILGPGSG-PIRVAVKTLRKGATDQE--KKEFLKEAHLMS 54
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD---------WAMR 585
NH N V L+G C +EP +M E G L +L E +
Sbjct: 55 NFNHPNIVKLLGVCLLNEPQYIIM--ELMEGGDLLSYLRDARVERFGPPLLTLKELLDIC 112
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTG 641
L +A G Y LE MH + +A RN S D KI DF + + K G
Sbjct: 113 LDVAKGCVY-LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEG 171
Query: 642 SA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLK 692
A E L +S+V+SFG +++E++T G+ Y ++ N + + +
Sbjct: 172 EGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR 231
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
++P EN +++ ++ NC DP +RP+ I L+
Sbjct: 232 LQKP-------------ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 45/272 (16%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V++G ++ +AV + + F + + K+ H + L C
Sbjct: 17 GQFGEVWEGLWNNTTPVAVKTLKPGTMD------PKDFLAEAQIMKKLRHPKLIQLYAVC 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 604
+EP +V E GSL E+L L M ++A GMAY LE + +
Sbjct: 71 TLEEPI--YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAY-LEAQNYI-- 125
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTGS------AAMELLETSAVD 654
HR+L + ++ + E+ K++DF + A+ G+ A E +
Sbjct: 126 ---HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFS 182
Query: 655 LESNVYSFGTILFEMIT-GRISYS-IENGS-LENWASEYLKGEQPLKDIVDPTLKSFQEN 711
++S+V+SFG +L E++T GR+ Y + N L+ Y + P
Sbjct: 183 IKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMPCP-------------PG 228
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+EL ++ +C DP RP+ + KL++
Sbjct: 229 CPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 7e-14
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 54/287 (18%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543
G F + + KG G E V +++ D +NL+S+FR+++D K++HKN V
Sbjct: 16 GEFGEVFLAKA-KGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVR 72
Query: 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-------LDWAMRLRIAMGMAYCL 596
L+G C E EP M+ EY+ G L + L +++ L ++ + +A +
Sbjct: 73 LLGLCREAEPH--YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM 130
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----------TAAKTGSAAME 646
+H+ HR+L + + ++ K+S S + A E
Sbjct: 131 DHLSNAR--FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL- 705
++ +S+V+SFG +++E+ T +GE P + D +
Sbjct: 189 AVQEDDFSTKSDVWSFGVLMWEVFT--------------------QGELPFYGLSDEEVL 228
Query: 706 -----KSFQ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ E L ++ C +PK RPS + + L E
Sbjct: 229 NRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 1e-13
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLD-WAMRLRIA- 589
LS++NH V L Y + E ++ +V EY+P G LF HL + R A
Sbjct: 47 LSRINHPFIVKLH-YAFQTE--EKLYLVLEYAPGGELFSHL--SKEGRFSEERARFYAAE 101
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW--NNTTAAKTGS----- 642
+ +A LE++H L I +R+L+ +I L D K++DF ++ ++T +
Sbjct: 102 IVLA--LEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157
Query: 643 --AAMELLE----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696
A E+L AVD +S G +L+EM+TG+ + E+ E + LK
Sbjct: 158 EYLAPEVLLGKGYGKAVDW----WSLGVLLYEMLTGKPPFYAED-RKEIYEK-ILKDPLR 211
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731
+ + P + + LL DP +R
Sbjct: 212 FPEFLSPEARDL----ISGLLQK-------DPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 2e-13
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 104 LTLVMLLFLQNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFG 163
+ ++ LFL L++E + LL + + DP LS W+ + V C W G
Sbjct: 13 IFMLFFLFLN----FSMLHAEELELLLSFKSSINDPLKYLSNWNSSADV------CLWQG 62
Query: 164 VECSD-GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGEL-KELEI 221
+ C++ +VV ++L + G ++ + +L +++I L NN G IP +I L
Sbjct: 63 ITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRY 122
Query: 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
L+L NNF+G P G+ +L TL L NN G I ++
Sbjct: 123 LNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDI 160
|
Length = 968 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 2e-13
Identities = 72/287 (25%), Positives = 114/287 (39%), Gaps = 58/287 (20%)
Query: 489 GTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 544
G+ G VY+G E V +V A + +E F + + + N + V L
Sbjct: 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIE--FLNEASVMKEFNCHHVVRL 74
Query: 545 IGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAEH------------LDWAMRLRIAM 590
+G +P ++V E G L +L EAE+ + A IA
Sbjct: 75 LGVVSTGQP--TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMA--AEIAD 130
Query: 591 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSAAM- 645
GMAY L HR+L + + + ED KI DF + K G +
Sbjct: 131 GMAY-LAAKK-----FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLP 184
Query: 646 ------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG---EQP 696
E L+ +S+V+SFG +L+EM T A + +G E+
Sbjct: 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT--------------LAEQPYQGLSNEEV 230
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
LK ++D EN ++LL +++ C +PK RP+ I + LK+
Sbjct: 231 LKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 44/214 (20%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
+I LS + H N + + +D T ++ EY+ G+L++ + Q+ + + M L
Sbjct: 49 EIVILSLLQHPNIIAYYNHFMDDN--TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWY 106
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKT--GS 642
+ + ++H+ I HR++++ +I+LT+ K+ DF + + A+T G+
Sbjct: 107 LFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGT 164
Query: 643 A---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
+ EL + + +S++++ G +L+E++T + ++ N N + ++G
Sbjct: 165 PYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN--PLNLVVKIVQGNY--TP 220
Query: 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+V EL+ ++ + + DP++RP+
Sbjct: 221 VVSVYSS--------ELISLVHSLLQQDPEKRPT 246
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 3e-13
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 47/253 (18%)
Query: 504 EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE-DEPFTRMMVFEY 562
EI ++ S K R + RK++ LS + H N V Y E +E +V +Y
Sbjct: 32 EINISKMSPKER--------EESRKEVAVLSNMKHPNIVQ---YQESFEENGNLYIVMDY 80
Query: 563 SPNGSLFEHLHIQ------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616
G L++ ++ Q E + LDW +++ +A L+H+H I HR+++S +I
Sbjct: 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLA------LKHVHDRK--ILHRDIKSQNI 132
Query: 617 YLTEDYAAKISDFSF---WNNTTA-AKT--GSA---AMELLETSAVDLESNVYSFGTILF 667
+LT+D K+ DF N+T A+T G+ + E+ E + +S++++ G +L+
Sbjct: 133 FLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLY 192
Query: 668 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 727
EM T + ++ E G+++N + ++G P V N++ +L +
Sbjct: 193 EMCT--LKHAFEAGNMKNLVLKIIRGSYP---PVSSHYSYDLRNLVSQLF-------KRN 240
Query: 728 PKQRPSMRGIAAK 740
P+ RPS+ I K
Sbjct: 241 PRDRPSVNSILEK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V++G + V +A+ + D K + F+K++ L ++ HK+ ++L C
Sbjct: 17 GYFGEVWEGLWKNRVRVAI---KILKSDDLLKQQD--FQKEVQALKRLRHKHLISLFAVC 71
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 604
EP ++ E GSL L E + L A M ++A GMAY LE +
Sbjct: 72 SVGEPV--YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAY-LEEQN---- 124
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFS---------FWNNTTAAKTGSAAMELLETSAVDL 655
HR+L + +I + ED K++DF + ++ A E
Sbjct: 125 -SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFST 183
Query: 656 ESNVYSFGTILFEMIT-GRISY 676
+S+V+SFG +L+EM T G++ Y
Sbjct: 184 KSDVWSFGILLYEMFTYGQVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 41/214 (19%)
Query: 488 DGTVGTVYKGTLSS-GVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLI 545
+G G VYKG L+ ++ TS ++K+ + + ++ +FR++ + +S + H N V L+
Sbjct: 15 EGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLL 74
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD--------------WA-----MRL 586
G C +++P M+FEY +G L E L ++ + H D + +
Sbjct: 75 GVCTKEQPTC--MLFEYLAHGDLHEFL-VRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KTGSA 643
+IA GM Y H HR+L + + + E KISDF + +A + S
Sbjct: 132 QIAAGMEYLSSHH------FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSK 185
Query: 644 AM--------ELLETSAVDLESNVYSFGTILFEM 669
++ E + ES+++SFG +L+E+
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 39/281 (13%)
Query: 488 DGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 545
+G G+V +G LS G ++ V ++K +E +F + + +H N + LI
Sbjct: 9 EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIE-EFLSEAACMKDFDHPNVMKLI 67
Query: 546 GYCEEDEPFTR----MMVFEYSPNGSLFEHL---HIQEA-EHLDWAMRLRIAMGMAYCLE 597
G C E + M++ + +G L L + E L L+ + +A +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSA--AME 646
++ HR+L + + L ED ++DF ++ AK A+E
Sbjct: 128 YLS--NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 185
Query: 647 LLETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGEQPLKDIVDPT 704
L +S+V++FG ++E+ T G+ Y +EN + + YL+ LK
Sbjct: 186 SLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYD----YLRHGNRLKQ----- 236
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745
E+ L+EL ++ +C DPK RP+ + L+ I
Sbjct: 237 ----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 507 VTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSP 564
VT +VK ++D ++ S +++ + + HKN +NL+G C +D P ++ EY+
Sbjct: 50 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYAS 107
Query: 565 NGSLFEHLHIQEAEHLDWAMR------------------LRIAMGMAYCLEHMHQLTPPI 606
G+L E+L + +++ ++A GM Y +
Sbjct: 108 KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL------ASKKC 161
Query: 607 AHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAM--ELLETSAVDL 655
HR+L + ++ +TED KI+DF ++ TT + M E L
Sbjct: 162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 221
Query: 656 ESNVYSFGTILFEMIT--GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713
+S+V+SFG +L+E+ T G + L E + ++P N
Sbjct: 222 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-------------SNCT 268
Query: 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747
EL +++++C H P QRP+ + + L I A+
Sbjct: 269 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 1e-12
Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 44/271 (16%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V+ G L + T +VKS R +L+++F ++ L + +H N V LIG
Sbjct: 6 GNFGEVFSGRLRADN----TPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI----AMGMAYCLEHMHQLT 603
C + +P +V E G L E L +++ A GM Y LE H +
Sbjct: 62 CTQKQPI--YIVMELVQGGDFLTFLR-TEGPRLKVKELIQMVENAAAGMEY-LESKHCI- 116
Query: 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN---NTTAAKTGS--------AAMELLETSA 652
HR+L + + +TE KISDF + A TG A E L
Sbjct: 117 ----HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGR 172
Query: 653 VDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710
ES+V+SFG +L+E + G + Y ++ N + ++ P E
Sbjct: 173 YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP-------------E 219
Query: 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ + +++ C DP QRPS + +L
Sbjct: 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 2e-12
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 33/189 (17%)
Query: 558 MVFEYSPNGSLFEHLHIQEA----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
+V EY+ NG L + L +Q E W ++I +G L H+H + I HR+++S
Sbjct: 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG----LAHLH--SKKILHRDIKS 129
Query: 614 SSIYLTEDYAAKISDF----SFWNNTTAAKT--GSA---AMELLETSAVDLESNVYSFGT 664
+++L KI D +NT A T G+ + EL E + +S+V++ G
Sbjct: 130 LNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGV 189
Query: 665 ILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNC 723
+L+E TG+ + N G+L + ++G P P + + ++L +I C
Sbjct: 190 VLYECCTGKHPFDANNQGAL---ILKIIRGVFP------PVSQMYS----QQLAQLIDQC 236
Query: 724 VHPDPKQRP 732
+ D +QRP
Sbjct: 237 LTKDYRQRP 245
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 2e-12
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 43/269 (15%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
IGS G G V+ G ++A+ + + + E F ++ + K++H
Sbjct: 8 LVQEIGS---GQFGLVWLGYWLEKRKVAIKTIREGAMS------EEDFIEEAQVMMKLSH 58
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYC 595
V L G C E P +VFE+ +G L ++L Q ++ M L + GMAY
Sbjct: 59 PKLVQLYGVCTERSPIC--LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAY- 115
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS------AAM 645
LE + + HR+L + + + E+ K+SDF ++ + TG+ ++
Sbjct: 116 LESSN-----VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSP 170
Query: 646 ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
E+ S +S+V+SFG +++E+ + G+ Y EN S G + K P
Sbjct: 171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY--ENRSNSEVVETINAGFRLYK----PR 224
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPS 733
L S ++V E ++++C P+ RPS
Sbjct: 225 LAS--QSVYE----LMQHCWKERPEDRPS 247
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 3e-12
Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 89/313 (28%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQF---RKKI--- 530
F IIG G+ TV + E A+ K L+ + KK+
Sbjct: 4 KFGKIIGE---GSFSTVVLAKEKETNKEYAI------------KILDKRQLIKEKKVKYV 48
Query: 531 ----DTLSKVN-HKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAM 584
+ L+++N H + L Y +DE + V EY+PNG L +++ + LD
Sbjct: 49 KIEKEVLTRLNGHPGIIKLY-YTFQDE--ENLYFVLEYAPNGELLQYIRKYGS--LDEKC 103
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNN 634
A + LE++H I HR+L+ +I L +D KI+DF S +N
Sbjct: 104 TRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESN 161
Query: 635 TTAAK----------------TGSA---AMELLETSAVDLESNVYSFGTILFEMITGRIS 675
A G+A + ELL S++++ G I+++M+TG+
Sbjct: 162 KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221
Query: 676 YSIENGSLENWASEYL------KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPK 729
+ GS +EYL K E P K +++E+LLV+ DP+
Sbjct: 222 F---RGS-----NEYLTFQKILKLEYSFPPNFPPDAK----DLIEKLLVL-------DPQ 262
Query: 730 QRPSMRGIAAKLK 742
R + +LK
Sbjct: 263 DRLGVNEGYDELK 275
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 3e-12
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 519 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCE---EDEPFTRMMVFEYSPNGSLFEHLHIQ 575
+K+ + + L ++H N +I Y E ED+ M+V EY+P G+L E++ +
Sbjct: 39 TKDERLAAQNECQVLKLLSHPN---IIEYYENFLEDKAL--MIVMEYAPGGTLAEYIQKR 93
Query: 576 EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNN 634
LD L + + L H+H I HR+L++ +I L + KI DF
Sbjct: 94 CNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKI 151
Query: 635 TTAAKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 686
++ + EL E + +S++++ G +L+E+ + + ++ N L
Sbjct: 152 LSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN--LPAL 209
Query: 687 ASEYLKGEQ-PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
+ + G P+ D P L+ ++L + DP +RP + I A
Sbjct: 210 VLKIMSGTFAPISDRYSPDLRQLILSML-----------NLDPSKRPQLSQIMA 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 5e-12
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 78/287 (27%)
Query: 484 GSFSDGTVGTVYKGT-LSSGV-----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
GSF G VY S G EI +++ S K R D ++ L K+N
Sbjct: 11 GSF-----GKVYLVRRKSDGKLYVLKEIDLSNMSEKERED--------ALNEVKILKKLN 57
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--------HIQEAEHLDWAMRLRIA 589
H N + EE +V EY+ G L + + E + LDW +++
Sbjct: 58 HPNIIKYYESFEEKGKL--CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF--VQLC 113
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTA-AKT--GSA 643
+ L+++H I HR+++ +I+LT + K+ DF ++T AKT G+
Sbjct: 114 LA----LKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTP 167
Query: 644 ---AMELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWASEY 690
+ EL + + +S+++S G +L+E+ T + ++ I G S+Y
Sbjct: 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQY 227
Query: 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L+++V L+ DP++RPS+ I
Sbjct: 228 ---SSELRNLVSSLLQ-------------------KDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 6e-12
Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 56/294 (19%)
Query: 485 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVN 543
+DG K + A +VK R D S N F K++ LS+++ N
Sbjct: 24 CEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83
Query: 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA-------------MRLRIAM 590
L+G C D P M+ EY NG L + L AE A M +IA
Sbjct: 84 LLGVCTVDPPL--CMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS 141
Query: 591 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK----TGSAAME 646
GM Y LE ++ HR+L + + + ++Y KI+DF N ++ G A +
Sbjct: 142 GMRY-LESLN-----FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLP 195
Query: 647 L--LETSAVDL-----ESNVYSFGTILFEMIT--GRISYS-------IENGSLENWASEY 690
+ + +V L +S+V++FG L+E++T Y IEN + +
Sbjct: 196 IRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIEN-------AGH 248
Query: 691 LKGEQPLKDIVD-PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ + + P N +++ ++ C D + RP+ R I L+
Sbjct: 249 FFRDDGRQIYLPRPP------NCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 1e-11
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+KGTL +AV + + D + L+ +F + L + +H N V LIG C
Sbjct: 6 GNFGEVFKGTLKDKTPVAVKTC----KEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM----GMAYCLEHMHQLTP 604
+ +P +V E P G L ++ + L ++ A+ GMAY LE + +
Sbjct: 62 TQRQPI--YIVMELVPGGDFLSFLR-KKKDELKTKQLVKFALDAAAGMAY-LESKNCI-- 115
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM----------ELLETSAVD 654
HR+L + + + E+ KISDF S+ + E L
Sbjct: 116 ---HRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYS 172
Query: 655 LESNVYSFGTILFEMIT 671
ES+V+S+G +L+E +
Sbjct: 173 SESDVWSYGILLWETFS 189
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 1e-11
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 66/248 (26%)
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM------------- 584
HKN +NL+G C +D P ++ EY+ G+L E+L + +D++
Sbjct: 77 HKNIINLLGACTQDGPL--YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFK 134
Query: 585 -----RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 630
++A GM Y + HR+L + ++ +TED KI+DF
Sbjct: 135 DLVSCAYQVARGMEYLA------SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNID 188
Query: 631 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS 688
++ TT + M E L +S+V+SFG +L+E+ T
Sbjct: 189 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT----------------- 231
Query: 689 EYLKGEQPLKDI-VDPTLKSFQE--------NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
G P I V+ K +E N EL ++++ C H P QRP+ + +
Sbjct: 232 ---LGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288
Query: 740 KLKEITAM 747
L + +
Sbjct: 289 DLDRVLTV 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 1e-11
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 51/262 (19%)
Query: 511 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL-- 568
+VK+ + S++ F+++ + L+ + H++ V G C E P +MVFEY +G L
Sbjct: 39 AVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL--LMVFEYMRHGDLNR 96
Query: 569 FEHLHIQEAEHLD---------------WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
F H +A+ L A+ +IA GM Y L +H HR+L +
Sbjct: 97 FLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVY-LASLH-----FVHRDLAT 150
Query: 614 SSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--------ELLETSAVDLESNVYSF 662
+ + + KI DF + T + G M E + ES+++SF
Sbjct: 151 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSF 210
Query: 663 GTILFEMIT-GRIS-YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVI 720
G +L+E+ T G+ Y + N ++ + E+P E+ ++
Sbjct: 211 GVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERP-------------RTCPPEVYAIM 257
Query: 721 KNCVHPDPKQRPSMRGIAAKLK 742
+ C +P+QR ++ I ++L+
Sbjct: 258 QGCWQREPQQRMVIKDIHSRLQ 279
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 1e-11
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 153 GDNVNPCS-----WFGVEC----SDGKVVI--LNLRDLCLGGMLAPELGQLSELKSIILR 201
G N +PC W G +C + GK I L L + L G + ++ +L L+SI L
Sbjct: 391 GWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLS 450
Query: 202 NNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
NS G IP +G + LE+LDL +N+F+G P G SL L L+ N L G P
Sbjct: 451 GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN-SLSGRVP 507
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 2e-11
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
L G + ELGQ+ LK I L N+ G IP EIG L L LDL +NN +GP PS GN
Sbjct: 200 LVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL 259
Query: 241 FSLTTLLLDNNQYLGGISPELHVL-KVIS 268
+L L L N+ G I P + L K+IS
Sbjct: 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLIS 288
|
Length = 968 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 61/264 (23%), Positives = 123/264 (46%), Gaps = 49/264 (18%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ G ++ ++AV K+ + ++++ F ++ + + + H V L
Sbjct: 17 GQFGEVWMGYYNNSTKVAV-----KTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVV 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----RIAMGMAYCLEHMHQLTP 604
++EP ++ EY GSL + L E + + +IA GMAY +E + +
Sbjct: 71 TKEEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYI-- 125
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSAVD 654
HR+L+++++ ++E KI+DF +N A+ G+ A E + +
Sbjct: 126 ---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 182
Query: 655 LESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ---- 709
++S+V+SFG +L+E++T G+I Y + S D++ + ++
Sbjct: 183 IKSDVWSFGILLYEIVTYGKIPYPGMSNS----------------DVMSALQRGYRMPRM 226
Query: 710 ENVLEELLVVIKNCVHPDPKQRPS 733
EN +EL ++K C ++RP+
Sbjct: 227 ENCPDELYDIMKTCWKEKAEERPT 250
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 2e-11
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 69/296 (23%)
Query: 481 NIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLE--SQFRKKIDTLSKV 536
+IG G G VY GTL S G +I S+ D LE QF K+ +
Sbjct: 1 RVIGK---GHFGCVYHGTLIDSDGQKIHCAVKSLNRITD----LEEVEQFLKEGIIMKDF 53
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR------LRIAM 590
+H N ++L+G C E + ++V Y +G L + +E + ++ L++A
Sbjct: 54 SHPNVLSLLGICLPSEG-SPLVVLPYMKHGDL---RNFIRSETHNPTVKDLIGFGLQVAK 109
Query: 591 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW-----------NNTTAAK 639
GM Y HR+L + + L E + K++DF +N T AK
Sbjct: 110 GMEYLASK------KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAK 163
Query: 640 --TGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
A+E L+T +S+V+SFG +L+E++T +G P
Sbjct: 164 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT--------------------RGAPPY 203
Query: 698 KDI--VDPTLKSFQENVLEE-------LLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
D+ D T+ Q L + L V+ +C HP P+ RP+ + +++++I
Sbjct: 204 PDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 2e-11
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 42/225 (18%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQF 526
LK +EL ++GS G GTV+KG + ++K+ D S F
Sbjct: 4 LKETELRKL-----KLLGS---GVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG--RQTF 53
Query: 527 RKKID---TLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLH-----IQEA 577
++ D + ++H V L+G C P + +V + SP GSL +H+ +
Sbjct: 54 QEITDHMLAMGSLDHAYIVRLLGIC----PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQ 109
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-------- 629
L+W ++IA GM Y EH + HRNL + +I L D +I+DF
Sbjct: 110 RLLNWC--VQIAKGMYYLEEHR------MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161
Query: 630 ---SFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT 671
++ + A+E + +S+V+S+G ++EM++
Sbjct: 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 2e-11
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 42/268 (15%)
Query: 488 DGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 546
+G G V +G V + V ++A F ++ ++K++HKN V L+G
Sbjct: 16 EGEFGAVLQGEYTGQKVAVKNIKCDVTAQA---------FLEETAVMTKLHHKNLVRLLG 66
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPI 606
+ + +V E G+L L + + L+ ++ +A +E++ + +
Sbjct: 67 VILHNGLY---IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE--SKKL 121
Query: 607 AHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGSAAMELLETSAVDLESNVY 660
HR+L + +I ++ED AK+SDF + + A E L+ +S+V+
Sbjct: 122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVW 181
Query: 661 SFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEE---- 715
S+G +L+E+ + GR Y + LK++ + K ++ E
Sbjct: 182 SYGVLLWEVFSYGRAPYP----------------KMSLKEVKECVEKGYRMEPPEGCPAD 225
Query: 716 LLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ V++ +C +PK+RPS + KL++
Sbjct: 226 VYVLMTSCWETEPKKRPSFHKLREKLEK 253
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 3e-11
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 525 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA- 583
+F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + ++
Sbjct: 48 EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVV 105
Query: 584 ---MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTT 636
M +I+ M Y LE + + HR+L + + + E++ K++DF +T
Sbjct: 106 LLYMATQISSAMEY-LEKKNFI-----HRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159
Query: 637 AAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT 671
A G+ A E L + ++S+V++FG +L+E+ T
Sbjct: 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-11
Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 42/260 (16%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ G + ++A+ S S + F + + + ++ H V L
Sbjct: 17 GQFGEVWMGYYNGHTKVAIKSLKQGSMS------PEAFLAEANLMKQLQHPRLVRLYAVV 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 604
+ EP ++ EY NGSL + L E L M +IA GMA+ +E + +
Sbjct: 71 TQ-EPI--YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAF-IERKNYI-- 124
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSAVD 654
HR+L++++I ++E KI+DF +N A+ G+ A E +
Sbjct: 125 ---HRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 181
Query: 655 LESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713
++S+V+SFG +L E++T GRI Y + N E ++ + + P +N
Sbjct: 182 IKSDVWSFGILLTEIVTYGRIPYP----GMTN--PEVIQNLERGYRMPRP------DNCP 229
Query: 714 EELLVVIKNCVHPDPKQRPS 733
EEL +++ C P++RP+
Sbjct: 230 EELYELMRLCWKEKPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 5e-11
Identities = 65/298 (21%), Positives = 118/298 (39%), Gaps = 68/298 (22%)
Query: 483 IGSFSDGTVGTVYK----GTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
+ G G V++ G L V +K A S ++++ F+++ +++ +H
Sbjct: 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDH 67
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH------------------------- 573
N V L+G C +P ++FEY G L E L
Sbjct: 68 PNIVKLLGVCAVGKPMC--LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPL 125
Query: 574 -IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632
+ E L + ++A GMAY E HR+L + + + E+ KI+DF
Sbjct: 126 PLSCTEQL--CIAKQVAAGMAYLSERKF------VHRDLATRNCLVGENMVVKIADFGLS 177
Query: 633 NNTTAAK----TGSAAM-------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681
N +A + + A+ E + + ES+V+++G +L+E+ SY ++
Sbjct: 178 RNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI----FSYGMQ-- 231
Query: 682 SLENWASEY--LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
Y + E+ + + D + S +N EL +++ C P RPS I
Sbjct: 232 -------PYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 48/292 (16%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 536
F ++IG +G G V + + G+++ +K A S+N F +++ L K+
Sbjct: 6 FEDVIG---EGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLG 60
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR----------- 585
+H N +NL+G CE + EY+P G+L + L D A
Sbjct: 61 HHPNIINLLGACENRGYL--YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTS 118
Query: 586 ---LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKT 640
L+ A +A ++++ + HR+L + ++ + E+ A+KI+DF S KT
Sbjct: 119 QQLLQFASDVATGMQYLSE--KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKT 176
Query: 641 GS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLK 692
A+E L S +S+V+SFG +L+E+++ G Y + L + +
Sbjct: 177 MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E+P N +E+ +++ C P +RP I+ +L +
Sbjct: 237 MEKP-------------RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 6e-11
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 519 SKNLESQFRKKIDTLSKVNHKNFVNLIGY-CEEDEPFTRM-MVFEYSPNGSLFEHLHIQE 576
K L +I L +++ N + + G+ + + R+ ++ EY G L E L ++
Sbjct: 58 HKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK 117
Query: 577 AEHLDWAMRLRIAMGMAYCLEHMHQLT--PPIAHRNLQSSSIYLTEDYAAKI-------- 626
L + +L +A+ L ++++ T P ++NL S S +TE+Y KI
Sbjct: 118 --DLSFKTKLDMAIDCCKGLYNLYKYTNKP---YKNLTSVSFLVTENYKLKIICHGLEKI 172
Query: 627 -SDFSFWN-NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY------SI 678
S F N N S M S ++ ++YS G +L+E+ TG+I + I
Sbjct: 173 LSSPPFKNVNFMVYF--SYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI 230
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738
+ + S L + PL E+ +++ C D +RP+++ I
Sbjct: 231 YDLIINKNNSLKLPLDCPL-----------------EIKCIVEACTSHDSIKRPNIKEIL 273
Query: 739 AKL 741
L
Sbjct: 274 YNL 276
|
Length = 283 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 7e-11
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 46/279 (16%)
Query: 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+I +G G V+ GT + ++AV + + + S E+Q KK+ H
Sbjct: 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKL------RHDKL 63
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLE 597
V L E EP +V EY GSL + L E L M ++A GMAY +E
Sbjct: 64 VQLYAVVSE-EPI--YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IE 119
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMEL 647
M+ + HR+L+S++I + + KI+DF +N A+ G+ A E
Sbjct: 120 RMNYI-----HRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA 174
Query: 648 LETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS--LENWASEYLKGEQPLKDIVDPT 704
++S+V+SFG +L E++T GR+ Y N LE Y P +
Sbjct: 175 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY---RMPCPQDCPIS 231
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
L EL++ C DP++RP+ + + L++
Sbjct: 232 --------LHELML---QCWKKDPEERPTFEYLQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 7e-11
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 71/276 (25%)
Query: 488 DGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 546
+G G VYK T ++G E+A+ ++ +N E +I + H N V+
Sbjct: 29 EGASGEVYKATDRATGKEVAIKKMRLRK-----QNKELII-NEILIMKDCKHPNIVDYYD 82
Query: 547 -YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY-C------LEH 598
Y DE + +V EY GSL + + M +AY C LE+
Sbjct: 83 SYLVGDELW---VVMEYMDGGSLTDII-----TQNFVRMNEPQ---IAYVCREVLQGLEY 131
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT------GSA---AMELLE 649
+H + HR+++S +I L++D + K++DF F T K+ G+ A E+++
Sbjct: 132 LHSQ--NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIK 189
Query: 650 TSAVDLESNVYSFGTILFEMITG----------RISYSIENGSLENWASEYLKGEQPLKD 699
+ +++S G + EM G R + I KG PLK+
Sbjct: 190 RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT-----------KGIPPLKN 238
Query: 700 I--VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
P K F + C+ DP++RPS
Sbjct: 239 PEKWSPEFKDF-----------LNKCLVKDPEKRPS 263
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 8e-11
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 501 SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560
+G ++AV S +S + +L +K+I+ L + H+N V G C ED ++
Sbjct: 32 TGEQVAVKSLKPESGGNHIADL----KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 87
Query: 561 EYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 615
E+ P+GSL E+L I + L +A ++I GM Y + HR+L + +
Sbjct: 88 EFLPSGSLKEYLPRNKNKINLKQQLKYA--VQICKGMDYLGSRQY------VHRDLAARN 139
Query: 616 IYLTEDYAAKISDFSFWNNTTAAKTGSA---------------AMELLETSAVDLESNVY 660
+ + ++ KI DF T A +T A E L S + S+V+
Sbjct: 140 VLVESEHQVKIGDFGL---TKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVW 196
Query: 661 SFGTILFEMIT 671
SFG L+E++T
Sbjct: 197 SFGVTLYELLT 207
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 63.5 bits (154), Expect = 8e-11
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 52/241 (21%)
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 586
HKN +NL+G C +D P ++ EY+ G+L E+L + ++++ +
Sbjct: 80 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFK 137
Query: 587 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 630
++A GM Y HR+L + ++ +TE+ KI+DF
Sbjct: 138 DLVSCTYQVARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDVNNID 191
Query: 631 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 686
++ TT + M E L +S+V+SFG +++E+ T G I L
Sbjct: 192 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 251
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746
E + ++P N EL +++++C H P RP+ + + L I
Sbjct: 252 LKEGHRMDKP-------------ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298
Query: 747 M 747
+
Sbjct: 299 L 299
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 9e-11
Identities = 65/293 (22%), Positives = 108/293 (36%), Gaps = 72/293 (24%)
Query: 485 SFSDGTVGTVYKGTL---------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 535
GT +YKG L G E++V + S F + +S+
Sbjct: 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS----DHRDSLAFFETASLMSQ 57
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
++HK+ V L G C DE +MV EY G L LH ++ ++ +L +A +A
Sbjct: 58 LSHKHLVKLYGVCVRDE---NIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASA 113
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYA-------AKISDFSFWNNTTAAKTGSAAMELL 648
L ++ + H N+ +I + K+SD T + E +
Sbjct: 114 LHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI------PITVLSREERV 165
Query: 649 E-------------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
E +++ + ++ +SFGT L E+ + GE+
Sbjct: 166 ERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN--------------------GEE 205
Query: 696 PLKDIVDPTLKSFQE--NVL-----EELLVVIKNCVHPDPKQRPSMRGIAAKL 741
PL + + F + + L EL +I C DP +RPS R I L
Sbjct: 206 PLSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 1e-10
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 54/286 (18%)
Query: 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSV------KSRADWSKNLESQFRKKIDTLSKV 536
G FS VYK L G +A+ + K+R D K +ID L ++
Sbjct: 13 GQFS-----VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK--------EIDLLKQL 59
Query: 537 NHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGSL---FEHLHIQE---AEHLDWAMRLRIA 589
+H N + L + E +E +V E + G L +H Q+ E W +++
Sbjct: 60 DHPNVIKYLASFIENNE---LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAA--KTGS- 642
LEHMH I HR+++ +++++T K+ D F + TTAA G+
Sbjct: 117 SA----LEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 170
Query: 643 --AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700
+ E + + + +S+++S G +L+EM + + + +L + + K + P
Sbjct: 171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP---- 226
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746
P ++ EEL ++ C++PDP++RP + + KE+ A
Sbjct: 227 --PLPA---DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 56/296 (18%)
Query: 479 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
F ++IG +G G V K + G+ + +K A SK+ F +++ L K+
Sbjct: 11 FQDVIG---EGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLG 65
Query: 538 -HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR--------- 587
H N +NL+G CE + EY+P+G+L + L D A +
Sbjct: 66 HHPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 123
Query: 588 ---------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTT 636
+A GM Y + HR+L + +I + E+Y AKI+DF S
Sbjct: 124 QQLLHFAADVARGMDYLSQKQ------FIHRDLAARNILVGENYVAKIADFGLSRGQEVY 177
Query: 637 AAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWAS 688
KT A+E L S S+V+S+G +L+E+++ G Y + L
Sbjct: 178 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 237
Query: 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ + E+PL N +E+ +++ C P +RPS I L +
Sbjct: 238 QGYRLEKPL-------------NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 479 FSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
++IG G G VYKG L +G +A+ S++ + L+S ++ID L +
Sbjct: 4 LGDLIGR---GAFGVVYKGLNLETGDFVAIKQISLEK--IKEEALKS-IMQEIDLLKNLK 57
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL------FEHLHIQEAEHLDWAMRLRIAMG 591
H N V IG E + ++ EY+ NGSL F E L ++ G
Sbjct: 58 HPNIVKYIGSIETSDSL--YIILEYAENGSLRQIIKKFGPF----PESLVAVYVYQVLQG 111
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-------- 643
+AY +H+ + HR++++++I T+D K++DF A
Sbjct: 112 LAY----LHE--QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYW 165
Query: 644 -AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702
A E++E S S+++S G + E++TG Y L L IV
Sbjct: 166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY------------DLNPMAALFRIVQ 213
Query: 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
E + EL + C DP RP+ A +L
Sbjct: 214 DDHPPLPEGISPELKDFLMQCFQKDPNLRPT----AKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 482 IIGSFSDGTVGTVYK-GTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
++ G+ G+VYK LS A+ + S S+ +I L+ VNH N
Sbjct: 4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM---SQKEREDAVNEIRILASVNHPN 60
Query: 541 FVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEA------EHLDWAMRLRIAMGMA 593
+I Y E ++ +V EY+P G L + + ++ E W + +++ G
Sbjct: 61 ---IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG-- 115
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS---AAME 646
L+ +H+ I HR+L+S++I L + KI D N + G+ A E
Sbjct: 116 --LQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPE 171
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
+ + +S+++S G +L+EM T E S+++ + +G+ P
Sbjct: 172 VWKGRPYSYKSDIWSLGCLLYEMATFA--PPFEARSMQDLRYKVQRGKYP---------- 219
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
++L I++ + PK RP+ I A
Sbjct: 220 PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 36/228 (15%)
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAE 578
E F ++ + K++H N V L G C + P +V EY NG L +L E
Sbjct: 43 EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPI--FIVTEYMANGCLLNYLRERKGKLGTE 100
Query: 579 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNN 634
L M + M Y + HR+L + + + ED K+SDF ++
Sbjct: 101 WL-LDMCSDVCEAMEYLESNG------FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153
Query: 635 TTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687
+ G+ A E+ + S +S+V+SFG +++E+ + G++ Y E S
Sbjct: 154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPY--ERFSNSEVV 211
Query: 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
G + + P L E+ ++ +C H P+ RP+ +
Sbjct: 212 ESVSAGYRLYR----PKLAP------TEVYTIMYSCWHEKPEDRPAFK 249
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 2e-10
Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 52/240 (21%)
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----------- 586
HKN +NL+G C ++ P ++ EY+ G+L E L + D+ +
Sbjct: 77 HKNIINLLGVCTQEGPL--YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFK 134
Query: 587 -------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------S 630
++A GM Y LE + HR+L + ++ +TED KI+DF
Sbjct: 135 DLVSCAYQVARGMEY-LESRRCI-----HRDLAARNVLVTEDNVMKIADFGLARGVHDID 188
Query: 631 FWNNTTAAKTGSAAM--ELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGSLENW 686
++ T+ + M E L +S+V+SFG +++E+ T G I L
Sbjct: 189 YYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746
E + ++P N EL ++++ C H P QRP+ + + L ++ A
Sbjct: 249 LREGHRMDKP-------------SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 3e-10
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 42/270 (15%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ GT + ++A+ + + + F ++ + K+ H V L
Sbjct: 17 GCFGEVWMGTWNGTTKVAIKTLKPGTM------MPEAFLQEAQIMKKLRHDKLVPLYAVV 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 604
E EP +V E+ GSL + L + ++L M +IA GMAY +E M+ +
Sbjct: 71 SE-EPI--YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYI-- 124
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSAVD 654
HR+L++++I + ++ KI+DF +N A+ G+ A E
Sbjct: 125 ---HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 655 LESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713
++S+V+SFG +L E++T GR+ Y + N E L EQ + P + E++
Sbjct: 182 IKSDVWSFGILLTELVTKGRVPYP----GMVN--REVL--EQVERGYRMPCPQGCPESLH 233
Query: 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
E ++K C DP +RP+ I + L++
Sbjct: 234 E----LMKLCWKKDPDERPTFEYIQSFLED 259
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 3e-10
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ GT + +A+ + + + F ++ + K+ H+ V L
Sbjct: 17 GCFGEVWMGTWNGTTRVAIKTLKPGTMS------PEAFLQEAQVMKKLRHEKLVQLYAVV 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTP 604
E EP +V EY GSL + L + ++L M +IA GMAY +E M+ +
Sbjct: 71 SE-EPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYV-- 124
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSAVD 654
HR+L++++I + E+ K++DF +N A+ G+ A E
Sbjct: 125 ---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 655 LESNVYSFGTILFEMIT-GRISY 676
++S+V+SFG +L E+ T GR+ Y
Sbjct: 182 IKSDVWSFGILLTELTTKGRVPY 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 3e-10
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 45/280 (16%)
Query: 488 DGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLI 545
+G G V K + G+ + +K A SK+ F +++ L K+ +H N +NL+
Sbjct: 5 EGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLL 62
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR--------------LRIAMG 591
G CE + EY+P+G+L + L D A L A
Sbjct: 63 GACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------A 643
+A ++++ Q HR+L + +I + E+Y AKI+DF S KT
Sbjct: 121 VARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 178
Query: 644 AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKDIV 701
A+E L S S+V+S+G +L+E+++ G Y + L + + E+P
Sbjct: 179 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP----- 233
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
N +E+ +++ C P +RPS I L
Sbjct: 234 --------LNCDDEVYDLMRQCWREKPYERPSFAQILVSL 265
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 4e-10
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 515 RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI 574
RAD +K + F K+I +S++ + N + L+G C D+P M+ EY NG L + L
Sbjct: 53 RADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLC--MITEYMENGDLNQFLSQ 110
Query: 575 QEAEH----------LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 624
+E E + A L +A+ +A ++++ L HR+L + + + Y
Sbjct: 111 REIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATRNCLVGNHYTI 168
Query: 625 KISDFSFWNNTTAAK----TGSA-------AMELLETSAVDLESNVYSFGTILFEMIT 671
KI+DF N + G A A E + S+V++FG L+EM T
Sbjct: 169 KIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 6e-10
Identities = 67/283 (23%), Positives = 118/283 (41%), Gaps = 50/283 (17%)
Query: 489 GTVGTVYKGTLSSGV-----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543
G+ G VY+G ++ GV E V +V A + +E F + + + N + V
Sbjct: 17 GSFGMVYEG-IAKGVVKDEPETRVAIKTVNEAASMRERIE--FLNEASVMKEFNCHHVVR 73
Query: 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLH----------IQEAEHLDWAMRL--RIAMG 591
L+G + +P +++ E G L +L +Q L +++ IA G
Sbjct: 74 LLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG 131
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--- 645
MAY + HR+L + + + ED+ KI DF + T + G +
Sbjct: 132 MAYLNAN------KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 185
Query: 646 -----ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700
E L+ S+V+SFG +L+E+ T L + + EQ L+ +
Sbjct: 186 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQPYQGMSNEQVLRFV 234
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
++ L +N + L +++ C +PK RPS I + +KE
Sbjct: 235 MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 7e-10
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 53/269 (19%)
Query: 511 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570
+VK+ D S N F ++ + L+ + H++ V G C E +P +MVFEY +G L +
Sbjct: 39 AVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL--IMVFEYMKHGDLNK 96
Query: 571 HL-----------------HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613
L + +++ L A +IA GM Y L H HR+L +
Sbjct: 97 FLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ--QIAAGMVY-LASQH-----FVHRDLAT 148
Query: 614 SSIYLTEDYAAKISDFSFWNN---TTAAKTGSAAM--------ELLETSAVDLESNVYSF 662
+ + E+ KI DF + T + G M E + ES+V+S
Sbjct: 149 RNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208
Query: 663 GTILFEMIT-GRIS-YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVI 720
G +L+E+ T G+ Y + N + ++ ++P ++ + V + +L
Sbjct: 209 GVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP---------RTCPKEVYDLML--- 256
Query: 721 KNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
C +P R +++ I + L+ + P
Sbjct: 257 -GCWQREPHMRLNIKEIHSLLQNLAKASP 284
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 66/284 (23%), Positives = 107/284 (37%), Gaps = 64/284 (22%)
Query: 480 SNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
N IG GT G VY L +G +AV ++ D + ++ L + H
Sbjct: 5 GNKIGG---GTFGKVYTAVNLDTGELMAVKEIRIQ---DNDPKTIKEIADEMKVLELLKH 58
Query: 539 KNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLH--IQEAEHLDWAMRLRIAMGMAYC 595
N V G E ++ +F EY G+L E L EH+ L++ G+AY
Sbjct: 59 PNLVKYYGVEVHRE---KVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYL 115
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKTGSAAME----- 646
H I HR+++ ++I+L + K+ DF NNTT ++
Sbjct: 116 HSHG------IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY 169
Query: 647 ------LLETS-----AVDLESNVYSFGTILFEMITGRISYS-IENGSLENWASEYLKGE 694
A D ++S G ++ EM TG+ +S ++N + + G
Sbjct: 170 MAPEVITGGKGKGHGRAAD----IWSLGCVVLEMATGKRPWSELDN----EFQIMFHVGA 221
Query: 695 Q-----PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
P + P K F + C+ DPK+RP+
Sbjct: 222 GHKPPIPDSLQLSPEGKDF-----------LDRCLESDPKKRPT 254
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 69/303 (22%), Positives = 117/303 (38%), Gaps = 74/303 (24%)
Query: 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKK 529
++ + +IG G G V +G L EI V ++K+ + S F +
Sbjct: 1 IDPSYVTIEKVIGG---GEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTE 55
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW----AMR 585
+ + +H N + L G + P M++ EY NGSL + L + + M
Sbjct: 56 ASIMGQFDHPNIIRLEGVVTKSRPV--MIITEYMENGSLDKFLRENDGK-FTVGQLVGML 112
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF------WNNTTAAK 639
IA GM Y E + HR+L + +I + + K+SDF T K
Sbjct: 113 RGIASGMKYLSEMNY------VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK 166
Query: 640 TGS-----AAMELLE----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690
G A E + TSA S+V+SFG +++E+ +SY
Sbjct: 167 GGKIPIRWTAPEAIAYRKFTSA----SDVWSFGIVMWEV----MSY-------------- 204
Query: 691 LKGEQPL-----KDIVDPTLKSFQ-------ENVLEELLVVIKNCVHPDPKQRPSMRGIA 738
GE+P +D++ ++ + L +L+ +C D +RP+ I
Sbjct: 205 --GERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLM---LDCWQKDRNERPTFSQIV 259
Query: 739 AKL 741
+ L
Sbjct: 260 STL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 1e-09
Identities = 68/301 (22%), Positives = 118/301 (39%), Gaps = 68/301 (22%)
Query: 488 DGTVGTVYKGTLSSGVEIA----VTSTSVKSRADWSKNLE-SQFRKKIDTLSKVNHKNFV 542
+G G V K T + T+ +VK + + + E + + L +VNH + +
Sbjct: 10 EGEFGKVVKAT---AFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ----------------------EAEHL 580
L G C +D P +++ EY+ GSL L + L
Sbjct: 67 KLYGACSQDGPL--LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL 124
Query: 581 DWAMRL----RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----W 632
+ +I+ GM Y E + HR+L + ++ + E KISDF +
Sbjct: 125 TMGDLISFAWQISRGMQYLAEM------KLVHRDLAARNVLVAEGRKMKISDFGLSRDVY 178
Query: 633 NNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSL 683
+ K A+E L +S+V+SFG +L+E++T G Y I L
Sbjct: 179 EEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238
Query: 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
N + E+P EN EE+ ++ C +P +RP+ I+ +L++
Sbjct: 239 FNLLKTGYRMERP-------------ENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285
Query: 744 I 744
+
Sbjct: 286 M 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 52/240 (21%)
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH----IQEAEHLDW----------- 582
HKN +NL+G C ++ P +V EY+ +G+L + L E D
Sbjct: 75 HKNIINLLGVCTQEGPL--YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQK 132
Query: 583 ---AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNT 635
+ ++A GM + L + HR+L + ++ +TED+ KI+DF +
Sbjct: 133 DLVSFAYQVARGMEF-LA-----SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHID 186
Query: 636 TAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENW 686
KT + A E L +S+V+SFG +L+E+ T G Y I L
Sbjct: 187 YYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746
E + E+P N +EL ++++C H P QRP+ + + L +
Sbjct: 247 LKEGYRMEKPQ-------------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRMLT 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 515 RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-- 572
R D +KN + F K++ LS++ N + L+G C +++P M+ EY NG L + L
Sbjct: 55 RPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLC--MITEYMENGDLNQFLSS 112
Query: 573 -HIQEAEH--------------LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617
H+ + E + ++ L +A+ +A ++++ L HR+L + +
Sbjct: 113 HHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--FVHRDLATRNCL 170
Query: 618 LTEDYAAKISDFSFWNNTTAAK----TGSA-------AMELLETSAVDLESNVYSFGTIL 666
+ E+ KI+DF N A G A A E + S+V++FG L
Sbjct: 171 VGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230
Query: 667 FEMI 670
+E++
Sbjct: 231 WEIL 234
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 2e-09
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSV------KSRADWSKNLESQFRKKIDTLSKVNHKNF 541
G VY+ T L GV +A+ + K+RAD K +ID L ++NH N
Sbjct: 13 GQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIK--------EIDLLKQLNHPNV 64
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSL---FEHLHIQE---AEHLDWAMRLRIAMGMAYC 595
+ ED +V E + G L +H Q+ E W +++
Sbjct: 65 IKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSA---- 118
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT--GSA---AME 646
LEHMH + + HR+++ +++++T K+ D F + TTAA + G+ + E
Sbjct: 119 LEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 176
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD-PTL 705
+ + + +S+++S G +L+EM + + G N S K EQ D P L
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSLCKKIEQ-----CDYPPL 228
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSM 734
S ++ EEL ++ C++PDP++RP +
Sbjct: 229 PS--DHYSEELRQLVNMCINPDPEKRPDI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 2e-09
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 28/206 (13%)
Query: 488 DGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 546
+G G V G G ++ VK RA + + + F +++ ++NH N + +G
Sbjct: 5 NGWFGKVLLGEAHRG--MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT 603
C E P+ ++V E+ P G L +L A+ + R+A +A L +HQ
Sbjct: 63 QCIESIPY--LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120
Query: 604 PPIAHRNLQSSSIYLTEDYAAKISDFSF-----------WNNTTAAKTGSAAMELLETSA 652
H +L + LT D + KI D+ + A A EL+E
Sbjct: 121 --FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178
Query: 653 VDL-------ESNVYSFGTILFEMIT 671
DL +SN++S G ++E+ T
Sbjct: 179 QDLLPKDQTKKSNIWSLGVTMWELFT 204
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 3e-09
Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 43/281 (15%)
Query: 489 GTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 544
G G+V + L S ++AV +K+ S ++E +F ++ + + +H N + L
Sbjct: 10 GEFGSVREAQLKSEDGSFQKVAVKM--LKADIFSSSDIE-EFLREAACMKEFDHPNVIKL 66
Query: 545 IGYCEEDEPFTR----MMVFEYSPNGSLFEHLHI----QEAEHLDWAMRLRIAMGMAYCL 596
IG R M++ + +G L L + +E L +R + +A +
Sbjct: 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KTGSA--------AM 645
E++ + HR+L + + L E+ ++DF + + G A A+
Sbjct: 127 EYLS--SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLAL 184
Query: 646 ELLETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGEQPLKDIVDP 703
E L + S+V++FG ++E++T G+ Y+ +EN + N YL LK D
Sbjct: 185 ESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN----YLIKGNRLKQPPD- 239
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
LE++ ++ C P+PK RPS + + +L+ I
Sbjct: 240 --------CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 55/253 (21%)
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 585
F ++I+ L + H N V G C +V EY P GSL ++L + E LD
Sbjct: 52 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL-QKHRERLDHRKL 110
Query: 586 L----RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----------- 630
L +I GM Y + HR+L + +I + + KI DF
Sbjct: 111 LLYASQICKGMEYLGSKRY------VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY 164
Query: 631 -----------FWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679
FW A E L S + S+V+SFG +L+E+ T YS +
Sbjct: 165 YKVREPGESPIFW----------YAPESLTESKFSVASDVWSFGVVLYELFT----YSDK 210
Query: 680 NGSLENWASEYLKGEQPLKDIVDPTLKSFQEN--------VLEELLVVIKNCVHPDPKQR 731
+ S + ++ + IV ++ + N E+ ++K C + DP QR
Sbjct: 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQR 270
Query: 732 PSMRGIAAKLKEI 744
PS +A +++ I
Sbjct: 271 PSFSELALQVEAI 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 7e-09
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 53/262 (20%)
Query: 515 RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI 574
R D +KN + F K+I +S++ N + L+ C +P M+ EY NG L + L
Sbjct: 55 REDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLC--MITEYMENGDLNQFLSR 112
Query: 575 QEAEHLDWA-------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621
E + M +IA GM Y L ++ HR+L + + + ++
Sbjct: 113 HEPQEAAEKADVVTISYSTLIFMATQIASGMKY-LSSLN-----FVHRDLATRNCLVGKN 166
Query: 622 YAAKISDFSFWNNTTAAK----TGSAAM-------ELLETSAVDLESNVYSFGTILFEMI 670
Y KI+DF N + G A + E + S+V++FG L+E++
Sbjct: 167 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226
Query: 671 T--GRISYS-------IENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIK 721
T YS IEN E+ + + + P L + L ++
Sbjct: 227 TLCKEQPYSQLSDEQVIEN------TGEFFRDQGRQVYLPKPAL------CPDSLYKLML 274
Query: 722 NCVHPDPKQRPSMRGIAAKLKE 743
+C + K+RPS + I A L E
Sbjct: 275 SCWRRNAKERPSFQEIHATLLE 296
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 7e-09
Identities = 71/291 (24%), Positives = 115/291 (39%), Gaps = 55/291 (18%)
Query: 479 FSNIIGSFSDGTV--GTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
F +G+ + G V T Y G S + V +K A S+ KI +S +
Sbjct: 39 FGKTLGAGAFGKVVEATAY-GLSKSDAVMKVAVKMLKPTAHSSEREALMSELKI--MSHL 95
Query: 537 -NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL----RIAMG 591
NH+N VNL+G C P +++ EY G L L + L L ++A G
Sbjct: 96 GNHENIVNLLGACTIGGPI--LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKG 153
Query: 592 MAY-----CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS 642
MA+ C+ HR+L + ++ LT KI DF N++ G+
Sbjct: 154 MAFLASKNCI-----------HRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGN 202
Query: 643 A-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYS--IENGSLENWASEYLK 692
A A E + ES+V+S+G +L+E+ + G Y + E +
Sbjct: 203 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR 262
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
QP E+ E+ ++K C DP +RP+ + I + +
Sbjct: 263 MAQP-------------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 8e-09
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 175 NLRDLCLGG-----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
+L+ L LGG + L L+ L+ + L +N G IP+E+G++K L+ + LG+NN
Sbjct: 165 SLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
SG P + G SL L L N G I L LK
Sbjct: 225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260
|
Length = 968 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 47/275 (17%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL--ESQFRK---KIDTLSK 535
++G G GTVY G + G IAV + D S L E ++ K ++D L
Sbjct: 6 EVLGK---GAYGTVYCGLTNQGQLIAVKQVEL----DTSNVLAAEKEYEKLQEEVDLLKS 58
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMA 593
+ H N V +G C +D + M E+ P GS+ L+ E + +I G+A
Sbjct: 59 LKHVNIVQYLGTCLDDNTISIFM--EFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVA 116
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS-----FWNNTTAAKT-------G 641
Y + + HR+++ +++ L + K+ DF W + G
Sbjct: 117 YLHNNC------VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHG 170
Query: 642 SA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698
+ A E++ S +S+++S G +FEM TG+ + S++ A+ + G +
Sbjct: 171 TPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA----SMDRLAAMFYIGAH--R 224
Query: 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
++ SF ++ + +C+ D +RPS
Sbjct: 225 GLMPRLPDSFSAAAID----FVTSCLTRDQHERPS 255
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEA 577
E +F ++ + K++H+ V L G C + P +V EY NG L +L Q +
Sbjct: 43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPI--YIVTEYMSNGCLLNYLREHGKRFQPS 100
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WN 633
+ L+ M + GMAY LE Q HR+L + + + + K+SDF +
Sbjct: 101 QLLE--MCKDVCEGMAY-LES-KQFI----HRDLAARNCLVDDQGCVKVSDFGLSRYVLD 152
Query: 634 NTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 686
+ + GS + E+L S +S+V++FG +++E+ + G++ Y N S
Sbjct: 153 DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---- 208
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
K Q L+ + P L S E++ ++ +C H ++RP+ +
Sbjct: 209 -ETVEKVSQGLR-LYRPHLAS------EKVYAIMYSCWHEKAEERPTFQ 249
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-08
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 121 LNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS 167
LN + ALL F+ + DP GALS W+ + +PCSW GV C
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSWNPSSS-----DPCSWTGVTCD 42
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 41/230 (17%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGT---LSSGVEIAVTSTSVKSRADWSKNLE 523
LK +ELE ++GS G GTVYKG V+I V ++ N E
Sbjct: 4 LKETELE-----KIKVLGS---GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKE 55
Query: 524 SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEAE 578
+ ++ V+H + V L+G C ++ + P G L +++ I
Sbjct: 56 --ILDEAYVMASVDHPHVVRLLGICLSS---QVQLITQLMPLGCLLDYVRNHKDNIGSQY 110
Query: 579 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------ 632
L+W ++IA GM+Y LE + HR+L + ++ + KI+DF
Sbjct: 111 LLNWC--VQIAKGMSY-LEEKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162
Query: 633 NNTTAAKTGSA-----AMELLETSAVDLESNVYSFGTILFEMIT-GRISY 676
A+ G A+E + +S+V+S+G ++E++T G Y
Sbjct: 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 60/268 (22%), Positives = 108/268 (40%), Gaps = 36/268 (13%)
Query: 489 GTVGTVYKG-TLSSGVEIAVTSTSVKSRA-----DWSKNLESQFRKKIDTLSKVNHKNFV 542
GT G VY +++G +AV + + K++ R +I+TL ++H N V
Sbjct: 12 GTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIV 71
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
+G+ E + EY P GS+ L + + E L ++ G+AY +H
Sbjct: 72 QYLGF--ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAY----LH 125
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLET------SAVD 654
+ I HR+L++ ++ + D KISDF + M + + +
Sbjct: 126 --SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIH 183
Query: 655 LES-------NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
S +++S G ++ EM GR +S E A+ + G + + P +
Sbjct: 184 SYSQGYSAKVDIWSLGCVVLEMFAGRRPWS----DEEAIAAMFKLGNKRSAPPIPPDVSM 239
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMR 735
N+ L + C +P RP+ R
Sbjct: 240 ---NLSPVALDFLNACFTINPDNRPTAR 264
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 65/294 (22%), Positives = 110/294 (37%), Gaps = 56/294 (19%)
Query: 481 NIIGSFSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
++ G+ G VY+G + E V +V A + +E F + +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGF 66
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----------------HIQEAEHL 580
+ V L+G + +P ++V E +G L +L +QE
Sbjct: 67 TCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ- 123
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---TTA 637
M IA GMAY HR+L + + + D+ KI DF + T
Sbjct: 124 ---MAAEIADGMAYLN------AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 174
Query: 638 AKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689
+ G + E L+ S+++SFG +L+E+ SL +
Sbjct: 175 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-----------TSLAEQPYQ 223
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
L EQ LK ++D +N E + +++ C +PK RP+ I LK+
Sbjct: 224 GLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 3e-08
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 53/279 (18%)
Query: 485 SFSDGTVGTVYKGT---LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
S GT ++KG + E+ T +K +N F + +S+++HK+
Sbjct: 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHL 61
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM-RLRIAMGMAYCLEHMH 600
V G C + +MV EY GSL ++++ ++L +L +A +A+ L +
Sbjct: 62 VLNYGVCVCGD--ESIMVQEYVKFGSL--DTYLKKNKNLINISWKLEVAKQLAWALHFLE 117
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-NTTAAKTGSAAMELL----------- 648
+ H N+ + ++ L + K + F + E+L
Sbjct: 118 DKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPEC 175
Query: 649 --ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
+ L ++ +SFGT L+E+ +G G++PL +D K
Sbjct: 176 IENPQNLSLAADKWSFGTTLWEIFSG--------------------GDKPL-SALDSQKK 214
Query: 707 S-FQENVLE-------ELLVVIKNCVHPDPKQRPSMRGI 737
F E+ + EL +I C+ +P RPS R I
Sbjct: 215 LQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAI 253
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 527 RKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL 586
RK+ L+K+ H N V E D +V EY G L + + +Q + L
Sbjct: 46 RKEAVLLAKMKHPNIVAFKESFEADGHL--YIVMEYCDGGDLMQKIKLQRGKLFPEDTIL 103
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM- 645
+ + M ++H+H+ + HR+++S +I+LT++ K+ DF + G+ A
Sbjct: 104 QWFVQMCLGVQHIHE--KRVLHRDIKSKNIFLTQNGKVKLGDFG--SARLLTSPGAYACT 159
Query: 646 ----------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE- 694
E+ E + +S+++S G IL+E+ T + + + S +N + +G
Sbjct: 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT--LKHPFQANSWKNLILKVCQGSY 217
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
+PL P+ S+ EL +IK +P+ RPS I ++
Sbjct: 218 KPL-----PSHYSY------ELRSLIKQMFKRNPRSRPSATTILSR 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 483 IGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+GS G+ G+VY+G L G AV S+ + Q ++I LSK+ H N
Sbjct: 8 LGS---GSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI 64
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW---AMRLR-IAMGMAYCLE 597
V +G E++ + E P GSL +++ + R I +G+ Y
Sbjct: 65 VQYLGTEREEDNLYIFL--ELVPGGSL--AKLLKKYGSFPEPVIRLYTRQILLGLEY--- 117
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---AKT--GSA---AME-LL 648
+H HR+++ ++I + + K++DF AK+ GS A E +
Sbjct: 118 -LH--DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIA 174
Query: 649 ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708
+ L ++++S G + EM TG+ +S G + K P+ D + K F
Sbjct: 175 QQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDF 234
Query: 709 QENVLEELLVVIKNCVHPDPKQRPS 733
I C+ DP RP+
Sbjct: 235 -----------ILKCLQRDPSLRPT 248
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 5e-08
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 45/214 (21%)
Query: 492 GTVYKGTL---SSGVEI-AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G VYKG L + G + AV ++K +A+ L +F+ + S++ H N V L+G
Sbjct: 19 GKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGP--LREEFKHEAMMRSRLQHPNIVCLLGV 76
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD-------------------WAMRLRI 588
+++P + M+F Y + L E L + + H D + +I
Sbjct: 77 VTKEQPLS--MIFSYCSHSDLHEFL-VMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQI 133
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK----TGSAA 644
A GM + H + H++L + ++ + + KISD + AA G++
Sbjct: 134 AAGMEFLSSHH------VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSL 187
Query: 645 M-------ELLETSAVDLESNVYSFGTILFEMIT 671
+ E + ++S+++S+G +L+E+ +
Sbjct: 188 LPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 9e-08
Identities = 75/308 (24%), Positives = 115/308 (37%), Gaps = 90/308 (29%)
Query: 481 NIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRK---------KI 530
IG GT G VYK +G +A+ K + + K +I
Sbjct: 5 AQIGE---GTYGQVYKARNKKTGELVAL------------KKIRMENEKEGFPITAIREI 49
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPN--GSLFEHLHIQEAE-HLDWAMRLR 587
L K+ H N V L + MVFEY + L + ++ E + M+ +
Sbjct: 50 KLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-Q 108
Query: 588 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM-- 645
+ G+ Y H + I HR+++ S+I + D K++DF T K SA
Sbjct: 109 LLEGLQYL--HSNG----ILHRDIKGSNILINNDGVLKLADFGLARPYT--KRNSADYTN 160
Query: 646 ----------ELL--ETS---AVDLESNVYSFGTILFEMITGRISY--SIENGSL----- 683
ELL T VD ++S G IL E+ G+ + S E L
Sbjct: 161 RVITLWYRPPELLLGATRYGPEVD----MWSVGCILAELFLGKPIFQGSTELEQLEKIFE 216
Query: 684 -------ENWAS-------EYLKGEQPLKDIVDPTLKSFQE----NVLEELLVVIKNCVH 725
ENW E LK ++P K + K + ++L++LL +
Sbjct: 217 LCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL------ 270
Query: 726 PDPKQRPS 733
DPK+R S
Sbjct: 271 -DPKKRIS 277
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 9e-08
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL- 586
K+ID L ++NH N + + ED +V E + G L Q ++ RL
Sbjct: 51 KEIDLLKQLNHPNVIKYLDSFIEDNELN--IVLELADAGDL-----SQMIKYFKKQKRLI 103
Query: 587 ------RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTT 636
+ + + +EHMH + + HR+++ +++++T K+ D F + TT
Sbjct: 104 PERTVWKYFVQLCSAVEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161
Query: 637 AAKT--GSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691
AA + G+ + E + + + +S+++S G +L+EM + + + +L + +
Sbjct: 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE 221
Query: 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
+ + P P E+ E+L ++ C++PDP QRP +
Sbjct: 222 QCDYP------PLPT---EHYSEKLRELVSMCIYPDPDQRPDI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543
G G GTV KG + + + L+ + ++ + + ++++ V
Sbjct: 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVR 60
Query: 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGMAYCLEHM 599
+IG CE + + M+V E + G L + L H+ E + + +++MGM Y E
Sbjct: 61 MIGICEAE---SWMLVMELAELGPLNKFLQKNKHVTEKNITE--LVHQVSMGMKYLEET- 114
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSA------AMEL 647
HR+L + ++ L + AKISDF A AKT A E
Sbjct: 115 -----NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC 169
Query: 648 LETSAVDLESNVYSFGTILFE-----------MITGRISYSIENG 681
+ +S+V+SFG +++E M ++ IE+G
Sbjct: 170 MNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG 214
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRK 528
E+ + +IG+ G G V++G L E+AV ++K +++ F
Sbjct: 1 EIHPSHITKQKVIGA---GEFGEVFRGILKMPGRKEVAVAIKTLK--PGYTEKQRQDFLS 55
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW---AMR 585
+ + + +H N + L G + +P M++ EY NG+L ++L + E + M
Sbjct: 56 EASIMGQFSHHNIIRLEGVVTKFKPA--MIITEYMENGALDKYLRDHDGEFSSYQLVGML 113
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAK 639
IA GM Y L M+ + HR+L + +I + + K+SDF T
Sbjct: 114 RGIAAGMKY-LSDMNYV-----HRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTT 167
Query: 640 TGS------AAMELLETSAVDLESNVYSFGTILFEMIT 671
+G A E + S+V+SFG +++E+++
Sbjct: 168 SGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 3e-07
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 158 PCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELK 217
P S F ++ K++ L+L D L G + + QL L+ + L +N+F G IP + L
Sbjct: 277 PPSIFSLQ----KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332
Query: 218 ELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL----HVLKVI 267
L++L L N FSG P + G +LT L L N G I L ++ K+I
Sbjct: 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386
|
Length = 968 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 3e-07
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKG-------TLSSGVEIAVTSTSVKSRADWS 519
LK +EL+ ++GS G GTVYKG T+ V I + + + +A+
Sbjct: 4 LKETELKRV-----KVLGS---GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-- 53
Query: 520 KNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----I 574
+F + ++ ++H + V L+G C T +V + P+G L +++H I
Sbjct: 54 ----VEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLDYVHEHKDNI 106
Query: 575 QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN- 633
L+W ++IA GM Y E + HR+L + ++ + KI+DF
Sbjct: 107 GSQLLLNWC--VQIAKGMMYLEERR------LVHRDLAARNVLVKSPNHVKITDFGLARL 158
Query: 634 --------NTTAAKTGSA--AMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENG 681
N K A+E + +S+V+S+G ++E++T G+ I
Sbjct: 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 218
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ + + + QP +D + +V+ C D RP + +AA+
Sbjct: 219 EIPDLLEKGERLPQPPICTID-------------VYMVMVKCWMIDADSRPKFKELAAEF 265
Query: 742 KEITAMEP 749
+ A +P
Sbjct: 266 SRM-ARDP 272
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 587 RIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--AAKTGSA 643
+IA+ + LE++H +L+ + HR+++ S++ + + K+ DF AKT A
Sbjct: 107 KIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA 164
Query: 644 ------AMEL----LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 693
A E L D++S+V+S G + E+ TGR Y ++W + +
Sbjct: 165 GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPY-------DSWKTPF--- 214
Query: 694 EQPLKDIV-DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
Q LK +V +P+ + E E + C+ + K+RP+
Sbjct: 215 -QQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN 254
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 37/260 (14%)
Query: 489 GTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG- 546
G+ G VYK +G A+ V + Q +++ TL V G
Sbjct: 12 GSSGVVYKVRHKPTGKIYALKKIHVDGD----EEFRKQLLRELKTLRSCESPYVVKCYGA 67
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPI 606
+ +E E +V EY GSL +++ + + IA + L+++H I
Sbjct: 68 FYKEGEIS---IVLEYMDGGSL--ADLLKKVGKIPEPVLAYIARQILKGLDYLHT-KRHI 121
Query: 607 AHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT---GSAA-M--ELLETSAVDLES 657
HR+++ S++ + KI+DF NT G+ M E ++ + +
Sbjct: 122 IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAA 181
Query: 658 NVYSFGTILFEMITGRISYSIENGSLENWA--SEYLKGEQPL--KDIVDPTLKSFQENVL 713
+++S G L E G+ + G + G P + P + F
Sbjct: 182 DIWSLGLTLLECALGKFPFL-PPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDF----- 235
Query: 714 EELLVVIKNCVHPDPKQRPS 733
I C+ DPK+RPS
Sbjct: 236 ------ISACLQKDPKKRPS 249
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 55/276 (19%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK----- 529
N IG S G V S+G ++AV +L Q R++
Sbjct: 19 SYLDNFVKIGEGSTGIVCIATD--KSTGRQVAVKKM----------DLRKQQRRELLFNE 66
Query: 530 IDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFE---HLHIQEAEHLDWAMR 585
+ + H N V + Y DE + +V E+ G+L + H + E +
Sbjct: 67 VVIMRDYQHPNIVEMYSSYLVGDELW---VVMEFLEGGALTDIVTHTRMNEEQ------- 116
Query: 586 LRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------A 638
IA L+ + L + HR+++S SI LT D K+SDF F + +
Sbjct: 117 --IATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS 174
Query: 639 KTGS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
G+ A E++ E +++S G ++ EM+ G Y E L+ +
Sbjct: 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE---------PPLQAMK 225
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731
++D + P LK+ V L + + DP QR
Sbjct: 226 RIRDNLPPKLKN-LHKVSPRLRSFLDRMLVRDPAQR 260
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 6e-07
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKK 529
++A+C +IG+ G G V G L EI V ++K A +++ F +
Sbjct: 1 IDASCIKIEKVIGA---GEFGEVCSGRLKLPGKREIPVAIKTLK--AGYTEKQRRDFLSE 55
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR 587
+ + +H N ++L G + +P M+V EY NGSL L + + + LR
Sbjct: 56 ASIMGQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLR 113
Query: 588 -IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS 642
IA GM Y L M + HR+L + +I + + K+SDF ++ AA T
Sbjct: 114 GIASGMKY-LSDMGYV-----HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167
Query: 643 A--------AMELLETSAVDLESNVYSFGTILFEMIT 671
A E + S+V+S+G +++E+++
Sbjct: 168 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 6e-07
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 52/282 (18%)
Query: 481 NIIGSFSDGTVGTVY--KGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
II +G+ G +Y K S EI +T VK + +K++ L+
Sbjct: 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEK--------EASKKEVILLA 54
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ------EAEHLDWAMRLRI 588
K+ H N V +E+ +V EY G L + ++ Q E + L W ++I
Sbjct: 55 KMKHPNIVTFFASFQENGRL--FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWF--VQI 110
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF---WNNTTA-AKTGSA 643
++G L+H+H I HR+++S +I+L+++ AK+ DF N++ A T
Sbjct: 111 SLG----LKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVG 164
Query: 644 -----AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698
+ E+ + + +++++S G +L+E+ T + + E +L + +G
Sbjct: 165 TPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT--LKHPFEGNNLHQLVLKICQGY---- 218
Query: 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
P +F +L +I P+ RPS+ I +
Sbjct: 219 --FAPISPNFS----RDLRSLISQLFKVSPRDRPSITSILKR 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT--------GSAAMEL 647
LEH+HQ I +R+L+ ++ L + +ISD K G A E+
Sbjct: 108 LEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEV 165
Query: 648 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPTL 705
L+ D + ++ G L+EMI GR + +E + E ++ D P
Sbjct: 166 LQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEA 225
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA-KLKE 743
K E +L++ DP++R RG +A +++E
Sbjct: 226 KDLCEALLQK-----------DPEKRLGCRGGSADEVRE 253
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 9e-07
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 511 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570
+VK+ D + F+++ + L+ + H++ V G C + +P +MVFEY +G L +
Sbjct: 39 AVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNK 96
Query: 571 HLH--------------IQEAEHLDWAMRL----RIAMGMAYCLEHMHQLTPPIAHRNLQ 612
L Q L + L +IA GM Y L H HR+L
Sbjct: 97 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY-LASQH-----FVHRDLA 150
Query: 613 SSSIYLTEDYAAKISDFSFWNNTTAA---KTGSAAM--------ELLETSAVDLESNVYS 661
+ + + + KI DF + + + G M E + ES+V+S
Sbjct: 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 210
Query: 662 FGTILFEMIT 671
FG IL+E+ T
Sbjct: 211 FGVILWEIFT 220
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 1e-06
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 477 EDFSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 535
D IIG DG G VYK +G+ A ++S + LE F +ID LS+
Sbjct: 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----EEELED-FMVEIDILSE 58
Query: 536 VNHKNFVNLI-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMA 593
H N V L Y E++ + ++ E+ G+L + + + E E L + M
Sbjct: 59 CKHPNIVGLYEAYFYENKLW---ILIEFCDGGAL-DSI-MLELERGLTEPQIRYVCRQML 113
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS--------- 642
L +H + HR+L++ +I LT D K++DF S N +T K +
Sbjct: 114 EALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMA 171
Query: 643 ---AAMELLETSAVDLESNVYSFGTILFEMITGR 673
A E + + D +++++S G L E+
Sbjct: 172 PEVVACETFKDNPYDYKADIWSLGITLIELAQME 205
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 53/238 (22%)
Query: 463 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKN 521
G PK K + E IG G GTVY +++G E+A+ N
Sbjct: 15 GDPKKKYTRFEK--------IGQ---GASGTVYTAIDVATGQEVAIKQM----------N 53
Query: 522 LESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGSLFE---HL 572
L+ Q +K+ I + + H N VN L Y DE + +V EY GSL +
Sbjct: 54 LQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELW---VVMEYLAGGSLTDVVTET 110
Query: 573 HIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSF 631
+ E + IA CL+ + L + + HR+++S +I L D + K++DF F
Sbjct: 111 CMDEGQ---------IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 161
Query: 632 WNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSIEN 680
T ++ + M E++ A + +++S G + EM+ G Y EN
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF 233
+NL + G + P LG ++ L+ + L NSF G+IP+ +G+L L IL+L N+ SG
Sbjct: 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
Query: 234 PSDFGN------SFSLTTLLLDNNQYLGGISPELH 262
P+ G SF+ T +N L GI P L
Sbjct: 507 PAALGGRLLHRASFNFT-----DNAGLCGI-PGLR 535
|
Length = 623 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 40/273 (14%)
Query: 489 GTVGTVYK--GTLSSGVEIAVTSTSVKSRAD--WSKNLESQFRKKIDTLS----KVNHKN 540
G G VYK + +A+ +V + A + + + ++ ++ H N
Sbjct: 11 GAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPN 70
Query: 541 FVNLI-GYCEEDEPFTRMMVFEYSPNGSLFEHL---HIQEAEHLDWAMRLRIAMGMAYCL 596
V + E D + M + E +P G F L + E W + +++ + + Y
Sbjct: 71 IVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRY-- 128
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW-----NNTTAAKTGS---AAMELL 648
+H+ I HR+L ++I L ED I+DF + + G+ + E++
Sbjct: 129 --LHK-EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIV 185
Query: 649 ETSAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENWASEYLKGE-QPLKDIVDPTLK 706
+ +++V++FG IL++M T + YS SL A++ ++ +PL + +
Sbjct: 186 KNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL---ATKIVEAVYEPLPEGMYSEDV 242
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
+ VI +C+ PD + RP + ++A
Sbjct: 243 TD----------VITSCLTPDAEARPDIIQVSA 265
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ T + ++AV + S + F + + + + H V L
Sbjct: 17 GQFGEVWMATYNKHTKVAVKTMKPGSMS------VEAFLAEANVMKTLQHDKLVKLHAVV 70
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH------LDWAMRLRIAMGMAYCLEHMHQL 602
+ EP ++ E+ GSL + L E +D++ + IA GMA+ +E + +
Sbjct: 71 TK-EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAF-IEQRNYI 124
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTGS------AAMELLETSA 652
HR+L++++I ++ KI+DF +N A+ G+ A E + +
Sbjct: 125 -----HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 179
Query: 653 VDLESNVYSFGTILFEMIT-GRISY 676
++S+V+SFG +L E++T GRI Y
Sbjct: 180 FTIKSDVWSFGILLMEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 58/286 (20%)
Query: 492 GTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLE-SQFRKKIDTLSKVNHKNFVNLIGYCE 549
G +YKG L G++ A ++K+ D + + +F+++ +++++H N V L+G
Sbjct: 19 GKIYKGHLYLPGMDHA-QLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT 77
Query: 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA--------------------MRLRIA 589
+++P M+FEY G L E L I + H D + ++IA
Sbjct: 78 QEQPVC--MLFEYLNQGDLHEFL-IMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIA 134
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KTGSAAM- 645
GM Y H H++L + +I + E KISD +A + ++
Sbjct: 135 AGMEYLSSHF------FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLL 188
Query: 646 -------ELLETSAVDLESNVYSFGTILFEMITGRIS--YSIENGSLENWASEYLKGEQP 696
E + +S+++SFG +L+E+ + + Y N + E ++ Q
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV----IEMVRKRQ- 243
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
L E+ + ++ C P +RP + I +L+
Sbjct: 244 --------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 58/291 (19%)
Query: 482 IIGSFSDGTVGTVYKGTLSS--GVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNH 538
IG +G G VY+G S +IAV +VK+ + S ++ +F ++ + + +H
Sbjct: 13 CIG---EGQFGDVYQGVYMSPENEKIAV---AVKTCKNCTSPSVREKFLQEAYIMRQFDH 66
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRIAMGMAY 594
+ V LIG E+ + +V E +P G L +L LD A +++ +AY
Sbjct: 67 PHIVKLIGVITENPVW---IVMELAPLGELRSYLQ-VNKYSLDLASLILYSYQLSTALAY 122
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTA---AKTGSAAMELLE 649
LE + IA RN+ SS K+ DF S + + A G ++ +
Sbjct: 123 -LESKRFVHRDIAARNVLVSSP-----DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMA 176
Query: 650 TSAVDLE-----SNVYSFGTILFEMITGRIS--YSIEN----GSLENWASEYLKGEQ-PL 697
+++ S+V+ FG ++E++ + ++N G +EN GE+ P+
Sbjct: 177 PESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-------GERLPM 229
Query: 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748
PTL S + C DP +RP + A+L +I E
Sbjct: 230 PPNCPPTLYSL-----------MTKCWAYDPSKRPRFTELKAQLSDILQEE 269
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFV 542
G F + +Y T V VK +A+ S +++F ++ D + H N +
Sbjct: 6 GWFGKVLLSEIYTDT-------GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNIL 58
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
+G C E P+ ++VFEY G L +L ++ + + L R+A +A + HMH
Sbjct: 59 QCLGQCVEAIPY--LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH 116
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDF 629
+ H +L + +LT D K+ D+
Sbjct: 117 KHN--FLHSDLALRNCFLTSDLTVKVGDY 143
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-06
Identities = 31/111 (27%), Positives = 52/111 (46%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
IL+L G + L L L+ + L +N F G IPK +G+ L +LDL NN +G
Sbjct: 312 ILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGE 371
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283
P +S +L L+L +N G I L + + +++ ++ +
Sbjct: 372 IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS 422
|
Length = 968 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 64/223 (28%), Positives = 87/223 (39%), Gaps = 52/223 (23%)
Query: 489 GTVGTVYKGTLS----SGVEIAV---TSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
G G VY+G VE+ V T S D ES F + +SK NH+N
Sbjct: 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQD-----ESDFLMEALIMSKFNHQNI 71
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD----WAMR--LRIAMGMA-- 593
V LIG E P R ++ E G L L + + M+ L A +A
Sbjct: 72 VRLIGVSFERLP--RFILLELMAGGDLKSFLR-ENRPRPERPSSLTMKDLLFCARDVAKG 128
Query: 594 -YCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAA----KTGSAAM 645
LE H + IA RN LT AKI+DF + A K G A +
Sbjct: 129 CKYLEENHFIHRDIAARN-----CLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML 183
Query: 646 EL--------LE---TSAVDLESNVYSFGTILFEMIT-GRISY 676
+ L+ TS D V+SFG +L+E+ + G + Y
Sbjct: 184 PIKWMPPEAFLDGIFTSKTD----VWSFGVLLWEIFSLGYMPY 222
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 59/272 (21%)
Query: 489 GTVGTVYKG-TLSSGVEIAVTSTSVK-SRADWSKNLESQ-FRKKIDTLSKVNHKNFVNLI 545
GT G VY LS+ V IA+ + SR Q ++I S + H+N V +
Sbjct: 19 GTYGIVYAARDLSTQVRIAIKEIPERDSR-------YVQPLHEEIALHSYLKHRNIVQYL 71
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC-------LEH 598
G E+ F M E P GSL L + W + + L++
Sbjct: 72 GSDSENGFFKIFM--EQVPGGSLSALLRSK------WGPLKDNEQTIIFYTKQILEGLKY 123
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAA--KISDF------SFWNNTTAAKTGSAAMELLET 650
+H I HR+++ ++ L Y+ KISDF + N T TG+ ++ +
Sbjct: 124 LHDNQ--IVHRDIKGDNV-LVNTYSGVVKISDFGTSKRLAGINPCTETFTGT--LQYMAP 178
Query: 651 SAVD-------LESNVYSFGTILFEMITGRISYSIENGSLEN--WASEYLKGEQPLKDIV 701
+D ++++S G + EM TG+ + IE G + + K + + +
Sbjct: 179 EVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF-IELGEPQAAMFKVGMFKIHPEIPESL 237
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
K+F I C PDP +R S
Sbjct: 238 SAEAKNF-----------ILRCFEPDPDKRAS 258
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 54/298 (18%), Positives = 113/298 (37%), Gaps = 73/298 (24%)
Query: 482 IIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
+G +GT G VYK +G +A+ ++ ++ ++I L ++NH N
Sbjct: 3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPK---TALREIKLLKELNHPN 59
Query: 541 FVNLIGYCEEDEPFTR----MMVFEYSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMA 593
+ L+ + F +VFE+ + L++ + ++ E L + ++ G+A
Sbjct: 60 IIKLL------DVFRHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLA 112
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA---------- 643
+C H H I HR+L+ ++ + + K++DF A++ +
Sbjct: 113 FC--HSHG----ILHRDLKPENLLINTEGVLKLADFGL------ARSFGSPVRPYTHYVV 160
Query: 644 -----AMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW------- 686
A ELL ++ VD ++S G I E+++ R + ++ ++
Sbjct: 161 TRWYRAPELLLGDKGYSTPVD----IWSVGCIFAELLSRRPLFPGKS-EIDQLFKIFRTL 215
Query: 687 ---ASEYLKGEQPLKDIVDPTLKSFQE--------NVLEELLVVIKNCVHPDPKQRPS 733
E L + N + L ++ +H DP +R +
Sbjct: 216 GTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT 273
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 482 IIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
IIG DG G VYK +G A KS + LE + +I+ L+ NH
Sbjct: 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----LED-YMVEIEILATCNHPY 70
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
V L+G D M+ E+ P G++ + + ++ L I M L+++H
Sbjct: 71 IVKLLGAFYWDGKLWIMI--EFCPGGAV-DAIMLELDRGLTEPQIQVICRQMLEALQYLH 127
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS------------AAME 646
+ I HR+L++ ++ LT D K++DF S N T + S E
Sbjct: 128 SMK--IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCE 185
Query: 647 LLETSAVDLESNVYSFGTILFEM 669
++ + D +++++S G L EM
Sbjct: 186 TMKDTPYDYKADIWSLGITLIEM 208
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 5e-06
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 39/193 (20%)
Query: 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMG-MAYCLEHMHQLTPPIAHRNLQSSSI 616
++ +Y G LF HL+ + EH + +R+ + + L+H+HQL I +R+++ +I
Sbjct: 82 LILDYVNGGELFTHLY--QREHFTES-EVRVYIAEIVLALDHLHQLG--IIYRDIKLENI 136
Query: 617 YLTEDYAAKISDFSFWNNTTAAKTGSA----------AMELLET------SAVDLESNVY 660
L + ++DF A + A A E++ AVD +
Sbjct: 137 LLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDW----W 192
Query: 661 SFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV 718
S G + FE++TG ++++ S + LK + P + + F + +LE+
Sbjct: 193 SLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEK--- 249
Query: 719 VIKNCVHPDPKQR 731
DPK+R
Sbjct: 250 --------DPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 44/224 (19%)
Query: 533 LSKVNHKNFVNLIGYCEE--DEPFTRM-MVFEYSPNGSL--------FEHLHIQEAEHLD 581
L ++ H N V Y + D + +V EY G L E +I E
Sbjct: 53 LRELKHPNIV---RYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI--EEEFI 107
Query: 582 WAMRLRIAMGMAYCLEHMHQLTPP---IAHRNLQSSSIYLTEDYAAKISDF----SFWNN 634
W + ++ + + C H + P + HR+L+ ++I+L + K+ DF ++
Sbjct: 108 WRILTQLLLALYEC----HNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163
Query: 635 TTAAKT--GSAA-M--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689
++ AKT G+ M E L + D +S+++S G +++E+ ++ A
Sbjct: 164 SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT---------ARN 214
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
L+ +K+ + EL VIK+ ++ DP +RPS
Sbjct: 215 QLQLASKIKEGKFRRIPYRYS---SELNEVIKSMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 34/256 (13%)
Query: 489 GTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548
G G V+ G + +++A+ + + + + E F ++ + K++H V L G C
Sbjct: 15 GQFGVVHLGKWRAQIKVAIKAINEGAMS------EEDFIEEAKVMMKLSHPKLVQLYGVC 68
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 608
+ +P +V E+ NG L +L Q L M L + + +E++ + + H
Sbjct: 69 TQQKPL--YIVTEFMENGCLLNYLR-QRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIH 123
Query: 609 RNLQSSSIYLTEDYAAKISDFSF--------WNNTTAAK--TGSAAMELLETSAVDLESN 658
R+L + + ++ K+SDF + +++ AK + E+ S +S+
Sbjct: 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSD 183
Query: 659 VYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELL 717
V+SFG +++E+ T G++ + E S +G + + P L S V E
Sbjct: 184 VWSFGVLMWEVFTEGKMPF--EKKSNYEVVEMISRGFR----LYRPKLASMT--VYE--- 232
Query: 718 VVIKNCVHPDPKQRPS 733
V+ +C H P+ RP+
Sbjct: 233 -VMYSCWHEKPEGRPT 247
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 9e-06
Identities = 56/255 (21%), Positives = 88/255 (34%), Gaps = 74/255 (29%)
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTR----MMVFEY-----------SPNGSLFEHL 572
+++ L ++ H+N VNL E F R +VFEY SP G L
Sbjct: 49 REVKVLRQLRHENIVNLK------EAFRRKGRLYLVFEYVERTLLELLEASPGG-----L 97
Query: 573 HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632
W ++ +AYC H H I HR+++ +I ++E K+ DF F
Sbjct: 98 PPDAVRSYIW----QLLQAIAYC--HSHN----IIHRDIKPENILVSESGVLKLCDFGFA 147
Query: 633 NNTTAAKTGS----------AAMELLETS-----AVDLESNVYSFGTILFEMITGRI--- 674
A A ELL VD V++ G I+ E++ G
Sbjct: 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVD----VWAIGCIMAELLDGEPLFP 203
Query: 675 -------SYSIEN---------GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLV 718
Y I+ L + + P + + + V L
Sbjct: 204 GDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALD 263
Query: 719 VIKNCVHPDPKQRPS 733
+K C+ DPK+R +
Sbjct: 264 FLKACLRMDPKERLT 278
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 9e-06
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKK-----IDTLSKVNHKNFV 542
G GTV+ +++G E+A+ NL+ Q +K+ I + ++ + N V
Sbjct: 30 GASGTVFTAIDVATGQEVAIKQI----------NLQKQPKKELIINEILVMKELKNPNIV 79
Query: 543 NLI-GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
N + + DE F +V EY GSL + + +D A + LE +H
Sbjct: 80 NFLDSFLVGDELF---VVMEYLAGGSLTD---VVTETCMDEAQIAAVCRECLQALEFLH- 132
Query: 602 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM---------ELLETSA 652
+ HR+++S ++ L D + K++DF F T ++ + M E++ A
Sbjct: 133 -ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 191
Query: 653 VDLESNVYSFGTILFEMITGRISYSIEN 680
+ +++S G + EM+ G Y EN
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPPYLNEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 1e-05
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
L G + P + L +L S+ L +NS G IP+ + +L+ LEIL L NNF+G P +
Sbjct: 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331
Query: 241 FSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSG 289
L L L +N++ G I L ++ + + + LT C+SG
Sbjct: 332 PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG 380
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 1e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 166 CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLG 225
CS G + L L L G + LG L+ + L++NSF G +P E +L + LD+
Sbjct: 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDIS 436
Query: 226 FNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGI 257
NN G S + SL L L N++ GG+
Sbjct: 437 NNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468
|
Length = 968 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 60/282 (21%)
Query: 476 CEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
E+ +I+ +G+ G+VYK +G +A+ V+ + + K+I L
Sbjct: 1 PEEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEII----KEISILK 53
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI-----QEAEHLDWAMRLRIA 589
+ + V G ++ +V EY GS+ + + I E E IA
Sbjct: 54 QCDSPYIVKYYGSYFKNT--DLWIVMEYCGAGSVSDIMKITNKTLTEEE---------IA 102
Query: 590 MGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGSA- 643
+ LE++H HR++++ +I L E+ AK++DF S T AK +
Sbjct: 103 AILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI 160
Query: 644 ------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
A E+++ + +++++S G EM G+ YS P+
Sbjct: 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS---------------DIHPM 205
Query: 698 KDIV------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+ I PTL E E +K C+ DP++RPS
Sbjct: 206 RAIFMIPNKPPPTLSD-PEKWSPEFNDFVKKCLVKDPEERPS 246
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 533 LSKVNHKNFVNLIGYCE--EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL------DWAM 584
LS++ H N V Y E E E +V + G L+ L Q+ + L +W
Sbjct: 53 LSQLKHPNIV---AYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWF- 108
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWNNTTAAKT 640
++IAM + Y L H I HR+L++ +++LT K+ D N A T
Sbjct: 109 -VQIAMALQY-LHEKH-----ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST 161
Query: 641 --GSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
G+ + EL + +S+V++ G ++EM T + +++ ++ + + ++G+
Sbjct: 162 LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--MNSLVYRIIEGKL 219
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
P P K + EL +I + P++RPS++ I
Sbjct: 220 P------PMPKDYS----PELGELIATMLSKRPEKRPSVKSI 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 1e-05
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKK 529
++ +C +IG+ G G V +G L EI V ++K + +++ F +
Sbjct: 1 IDVSCVKIEEVIGA---GEFGEVCRGRLKLPGKREIFVAIKTLK--SGYTEKQRRDFLSE 55
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH--LDWAMRLR 587
+ + +H N ++L G + P M++ E+ NG+L L + + + LR
Sbjct: 56 ASIMGQFDHPNIIHLEGVVTKSRPV--MIITEFMENGALDSFLRQNDGQFTVIQLVGMLR 113
Query: 588 -IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS---FWNNTTAAKTGSA 643
IA GM Y L M+ + HR+L + +I + + K+SDF F + T+ T ++
Sbjct: 114 GIAAGMKY-LSEMNYV-----HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 167
Query: 644 AM-----------ELLETSAVDLESNVYSFGTILFEMIT 671
++ E + S+V+S+G +++E+++
Sbjct: 168 SLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 169 GKVVILNLRDLC---LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLG 225
G + LN DL L G + LG L L+ + L N G IP I L++L LDL
Sbjct: 233 GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLS 292
Query: 226 FNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGIS------PELHVLKVIS 268
N+ SG P +L L L +N + G I P L VL++ S
Sbjct: 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
|
Length = 968 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 45/242 (18%)
Query: 455 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK 513
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 8 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAMDVATGQEVAIRQM--- 53
Query: 514 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 567
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 54 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 103
Query: 568 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627
L + + +D + LE +H + + HR+++S +I L D + K++
Sbjct: 104 LTD---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 628 DFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSI 678
DF F T ++ + M E++ A + +++S G + EMI G Y
Sbjct: 159 DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218
Query: 679 EN 680
EN
Sbjct: 219 EN 220
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 2e-05
Identities = 55/221 (24%), Positives = 85/221 (38%), Gaps = 70/221 (31%)
Query: 489 GTVGTVYKGT-LSSGVEIA------------VTSTSVKSRADWSKNLESQFRKKIDTLSK 535
GT G VYK +G +A + ST+++ +I L +
Sbjct: 10 GTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR---------------EISLLKE 54
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA----MG 591
+ H N V L+ + +VFEY L ++L + L + I G
Sbjct: 55 LKHPNIVKLLDVIHTERKLY--LVFEYCDM-DLKKYLD-KRPGPLSPNLIKSIMYQLLRG 110
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA-------- 643
+AYC H H+ I HR+L+ +I + D K++DF A G
Sbjct: 111 LAYC--HSHR----ILHRDLKPQNILINRDGVLKLADFGL-----ARAFGIPLRTYTHEV 159
Query: 644 ------AMELL-----ETSAVDLESNVYSFGTILFEMITGR 673
A E+L ++AVD ++S G I EMITG+
Sbjct: 160 VTLWYRAPEILLGSKHYSTAVD----IWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 485 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 544
+ +G G+V +G L+ I + A +++ F + + + +H N + L
Sbjct: 6 TLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRL 65
Query: 545 IGYC---EEDEPF-TRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLR----IAMGM 592
IG C E E + + +++ + +G L L ++L M ++ IA GM
Sbjct: 66 IGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM 125
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSA 643
Y + HR+L + + L E+ ++DF ++ AK
Sbjct: 126 EYLS------SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVK 179
Query: 644 --AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGEQPLKD 699
A+E L +S+V+SFG ++E+ T G+ Y +EN + +YL+ LK
Sbjct: 180 WIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI----YDYLRQGNRLKQ 235
Query: 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
D L+ L ++ +C +PK RPS + +L++
Sbjct: 236 PPD---------CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 3e-05
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
L G + E+G L+ L + L N+ G IP +G LK L+ L L N SGP P
Sbjct: 224 LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI--- 280
Query: 241 FSLTTLL-LD-NNQYLGGISPEL 261
FSL L+ LD ++ L G PEL
Sbjct: 281 FSLQKLISLDLSDNSLSGEIPEL 303
|
Length = 968 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-05
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 31/209 (14%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
I+G +G G V+K +G +A+ +++ + +Q ++I L H
Sbjct: 4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGG---IPNQALREIKALQACQHPY 60
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHM 599
V L+ F +V EY P L E L + E L A + + +M
Sbjct: 61 VVKLLDVFPHGSGFV--LVMEYMP-SDLSEVLR--DEERPLPEAQVKSYMRMLLKGVAYM 115
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGSA------AMELL- 648
H I HR+L+ +++ ++ D KI+DF F + A ELL
Sbjct: 116 HANG--IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173
Query: 649 ----ETSAVDLESNVYSFGTILFEMITGR 673
VDL ++ G I E++ G
Sbjct: 174 GARKYDPGVDL----WAVGCIFAELLNGS 198
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 592
L +V+H + L + E + M+ EY P G LF +L + + + L A +
Sbjct: 55 LKEVSHPFIIRL--FWTEHDQRFLYMLMEYVPGGELFSYL--RNSGRFSNSTGLFYASEI 110
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------WNNTTAAKTGSAA 644
LE++H I +R+L+ +I L ++ K++DF F W T A
Sbjct: 111 VCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW--TLCGTPEYLA 166
Query: 645 MELLETSAVDLESNVYSFGTILFEMITG 672
E++++ + + ++ G +++EM+ G
Sbjct: 167 PEVIQSKGHNKAVDWWALGILIYEMLVG 194
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 61/245 (24%)
Query: 489 GTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V KG +I V +K+ + K++ + ++ + + ++++ V +IG
Sbjct: 6 GNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGV 63
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHL----------HIQEAEHLDWAMRLRIAMGMAYCLE 597
CE + M+V E + G L + L ++ E H +++MGM Y LE
Sbjct: 64 CEAE---ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMH-------QVSMGMKY-LE 112
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------NNTTAAKTGSA------AM 645
+ HR+L + ++ L + AKISDF ++ A++ A
Sbjct: 113 GKN-----FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAP 167
Query: 646 ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
E + S+V+S+G ++E SY G++P K + P +
Sbjct: 168 ECINFRKFSSRSDVWSYGITMWEA----FSY----------------GQKPYKKMKGPEV 207
Query: 706 KSFQE 710
SF E
Sbjct: 208 MSFIE 212
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 46.3 bits (109), Expect = 4e-05
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 47/243 (19%)
Query: 455 QLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVK 513
+L+ G PK K + E G GTVY +++G E+A+
Sbjct: 7 KLRSIVSVGDPKKKYTRFE-----------KIGQGASGTVYTAIDIATGQEVAIKQM--- 52
Query: 514 SRADWSKNLESQFRKK-----IDTLSKVNHKNFVN-LIGYCEEDEPFTRMMVFEYSPNGS 567
NL+ Q +K+ I + + + N VN L Y DE + +V EY GS
Sbjct: 53 -------NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGS 102
Query: 568 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKI 626
L + + +D +IA CL+ + L + + HR+++S +I L D + K+
Sbjct: 103 LTD---VVTETCMDEG---QIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKL 156
Query: 627 SDFSFWNNTTAAKTGSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYS 677
+DF F T ++ + M E++ A + +++S G + EM+ G Y
Sbjct: 157 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216
Query: 678 IEN 680
EN
Sbjct: 217 NEN 219
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 47/182 (25%), Positives = 70/182 (38%), Gaps = 34/182 (18%)
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-------WNNTT--AAKTGSAAME 646
LEH+HQ I +R+L+ ++ L D +ISD + T A G A E
Sbjct: 110 LEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPE 167
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK--DIVDPT 704
LL+ D + ++ G L+EMI R + +EN + + D P
Sbjct: 168 LLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPA 227
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMR-GIAAKLKEITAMEPDGATPKLSPLWWAE 763
KSF E +L + DP++R R G L+ P L W +
Sbjct: 228 SKSFCEALLAK-----------DPEKRLGFRDGNCDGLR---------THPLFRDLNWRQ 267
Query: 764 LE 765
LE
Sbjct: 268 LE 269
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 5e-05
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
V L++ + L G + + L+ + L N FFG +P G K LE LDL N FS
Sbjct: 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFS 488
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
G P G+ L L L N+ G I EL
Sbjct: 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDEL 519
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 6e-05
Identities = 29/88 (32%), Positives = 39/88 (44%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF 233
L+L + L G + ++G S LK + L N G IP + L LE L L N G
Sbjct: 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI 204
Query: 234 PSDFGNSFSLTTLLLDNNQYLGGISPEL 261
P + G SL + L N G I E+
Sbjct: 205 PRELGQMKSLKWIYLGYNNLSGEIPYEI 232
|
Length = 968 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 58/287 (20%)
Query: 488 DGTVGTVYKGTLSS---GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 544
+GT G ++ G L G E V +VK A S+ + ++ L ++H+N + +
Sbjct: 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPI 73
Query: 545 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA------------MRLRIAMGM 592
+ C ED +++ Y G+L L +Q+ + M ++IA GM
Sbjct: 74 LHVCIED-GEPPFVLYPYMNWGNL--KLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM 130
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS---------- 642
+ ++H+ + H+++ + + + E+ KI+D + +
Sbjct: 131 S----YLHKRG--VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVK 184
Query: 643 -AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG----EQP 696
A+E L S+V+SFG +L+E++T G+ Y +E E A YLK QP
Sbjct: 185 WMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPY-VEIDPFEMAA--YLKDGYRLAQP 241
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ N +EL V+ C DP++RPS + L +
Sbjct: 242 I-------------NCPDELFAVMACCWALDPEERPSFSQLVQCLTD 275
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 6e-05
Identities = 71/288 (24%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRK 528
EL+ I+G+ G G + +G L S E+ V ++ RA S F
Sbjct: 1 ELDNKSIKIERILGT---GRFGELCRGCLKLPSKRELPVAIHTL--RAGCSDKQRRGFLA 55
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR- 587
+ TL + +H N V L G T M+V EY NG+L L E + + A +L
Sbjct: 56 EALTLGQFDHSNIVRLEGVITRGN--TMMIVTEYMSNGALDSFLRKHEGQLV--AGQLMG 111
Query: 588 ----IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN--------NT 635
+A GM Y E + H+ L + + + D KIS F T
Sbjct: 112 MLPGLASGMKYLSEMGY------VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTT 165
Query: 636 TAAKTGS--AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 693
+ K+ AA E ++ S+V+SFG +++E+ +SY G W + G
Sbjct: 166 MSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV----MSY----GERPYWD---MSG 214
Query: 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ +K + D N L ++ +C + +RP I + L
Sbjct: 215 QDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSIL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 8e-05
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 54/263 (20%)
Query: 497 GTLSSG-VEIAVTSTSVKSRADWSKNLESQFRKK-----IDTLSKVNHKNFVNLI-GYCE 549
G S+G V IA +S K A +L Q R++ + + H+N V + Y
Sbjct: 29 GEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 88
Query: 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT----PP 605
DE + M E + H + E + IA A CL + L+
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQ---------IA---AVCLAVLKALSVLHAQG 136
Query: 606 IAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLETSAVDLE 656
+ HR+++S SI LT D K+SDF F + + G+ A EL+ E
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE 196
Query: 657 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ------E 710
+++S G ++ EM+ G Y E LK + ++D + P LK+ +
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNE---------PPLKAMKMIRDNLPPKLKNLHKVSPSLK 247
Query: 711 NVLEELLVVIKNCVHPDPKQRPS 733
L+ LLV DP QR +
Sbjct: 248 GFLDRLLV-------RDPAQRAT 263
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 482 IIGSFSDGTVGTVYKG-TLSSGVEIAV----TSTSVKSRADWSKNLESQFRKKIDTLSKV 536
+IGS G+ G+VY G SSG +AV + S D +++ ++I L ++
Sbjct: 7 LIGS---GSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL 63
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMA 593
H+N V +G D + +F EY P GS+ L+ A E L +I G+
Sbjct: 64 QHENIVQYLG-SSLDA--DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN 120
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----NTTAAKTGSA------ 643
Y H I HR+++ ++I + KISDF N+ + KT A
Sbjct: 121 YL--HNRG----IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQG 174
Query: 644 -----AMELLETSAVDLESNVYSFGTILFEMITGR 673
A E+++ ++ +++++S G ++ EM+TG+
Sbjct: 175 SVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 63/287 (21%), Positives = 119/287 (41%), Gaps = 47/287 (16%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
++GS G GTVYKG + G ++ + + R S + + ++ V++ +
Sbjct: 14 VLGS---GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 70
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYC 595
L+G C T ++ + P G L +++ +I L+W ++IA GM Y
Sbjct: 71 VCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNY- 124
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSA-----A 644
LE + HR+L + ++ + KI+DF A A+ G A
Sbjct: 125 LEERR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMA 179
Query: 645 MELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703
+E + +S+V+S+G ++E++T G Y + +S KGE+ + P
Sbjct: 180 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGER----LPQP 233
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750
+ + ++ +++ C D RP R + E + M D
Sbjct: 234 PICTI------DVYMIMVKCWMIDADSRPKFRELII---EFSKMARD 271
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--AAKT---G 641
+IA+ + L ++H+ I HR+++ S+I + K+ DF AKT
Sbjct: 104 KIAVAVLKGLTYLHE-KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGT 162
Query: 642 SAAM--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
S+ M E ++ + ++S+++S G L E+ TGR Y + L+
Sbjct: 163 SSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYP-------PENDPPDGIFELLQY 215
Query: 700 IVD---PTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
IV+ P L S + + C+ DP++RPS
Sbjct: 216 IVNEPPPRLPS--GKFSPDFQDFVNLCLIKDPRERPS 250
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 319 KASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNI 378
A +++S + E S SPS SP PSP E PS S +PPAP +
Sbjct: 160 DADVATTNSDNSFPGEDADPASASPSDPPSSSPGVPSFPSPPEDPSSPSDSSLPPAPSSF 219
Query: 379 -----PIVSSPPHLHSAPTSFAASTPSQVH 403
P P S P AA P V
Sbjct: 220 QSDTPPPSPESPTNPSPPPGPAAPPPPPVQ 249
|
Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 477 EDFSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 535
ED+ +I GT G VYK +++G +A+ ++ D+ +++I L +
Sbjct: 3 EDY-ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFE-----IIQQEISMLKE 56
Query: 536 VNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAM-G 591
H N V G Y D+ + M EY GSL + + L A R + G
Sbjct: 57 CRHPNIVAYFGSYLRRDKLWIVM---EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKG 113
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629
+AY L ++ HR+++ ++I LTED K++DF
Sbjct: 114 LAY-LHETGKI-----HRDIKGANILLTEDGDVKLADF 145
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 477 EDFSNIIGSFSDGTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 535
E+F IIG DG G VYK +GV A KS + LE + +ID L+
Sbjct: 4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE----LED-YMVEIDILAS 58
Query: 536 VNHKNFVNLIG--YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
+H N V L+ Y E + ++ E+ G++ +A L+ L
Sbjct: 59 CDHPNIVKLLDAFYYENN----LWILIEFCAGGAV-------DAVMLELERPLTEPQIRV 107
Query: 594 YCLEHMHQLT----PPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS----- 642
C + + L I HR+L++ +I T D K++DF S N T + S
Sbjct: 108 VCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 167
Query: 643 ----AAMELLETSA---VDLESNVYSFGTILFEM 669
+ + ETS D +++V+S G L EM
Sbjct: 168 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 63/279 (22%), Positives = 103/279 (36%), Gaps = 45/279 (16%)
Query: 486 FSDGTVGTVY---KGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
S G G V+ K + I V + R KN Q + D LS+ +V
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----KNQVDQVLTERDILSQAQS-PYV 55
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 602
+ Y + + +V EY P G L L + D A R+ IA + LE++H
Sbjct: 56 VKLYYSFQGKK-NLYLVMEYLPGGDLASLLENVGSLDEDVA-RIYIAE-IVLALEYLHSN 112
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDF-----------SFWNNTTAAKT------GSAAM 645
I HR+L+ +I + + K++DF N+ A
Sbjct: 113 G--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAP 170
Query: 646 ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
E++ + +S G IL+E + G + E E L G+ + V
Sbjct: 171 EVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--PEEIFQNILNGKIEWPEDV---- 224
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
V +E + +I + PDP++R + I +EI
Sbjct: 225 -----EVSDEAIDLISKLLVPDPEKRLGAKSI----EEI 254
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 42/264 (15%)
Query: 489 GTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G VY + +G E+AV + +K + +I L + H+ V G
Sbjct: 13 GAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGC 72
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMAYCLEHMHQLTPP 605
+DE + M EY P GS+ + L A E + +I G+ Y +M
Sbjct: 73 LRDDETLSIFM--EYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM------ 124
Query: 606 IAHRNLQSSSIYLTEDYAAKISDF-------SFWNNTTAAK--TGSA---AMELLETSAV 653
I HR+++ ++I K+ DF + ++ T K TG+ + E++
Sbjct: 125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGY 184
Query: 654 DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP----LKDIVDPTLKSFQ 709
+++V+S G + EM+T + ++ E A+ + QP L V P ++F
Sbjct: 185 GRKADVWSVGCTVVEMLTEKPPWA----EFEAMAAIFKIATQPTNPQLPSHVSPDARNFL 240
Query: 710 ENVLEELLVVIKNCVHPDPKQRPS 733
E K+RPS
Sbjct: 241 RRTFVENA-----------KKRPS 253
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 501 SGVEIAVTSTSV--KSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558
+G +AV + + ++ + +E+ RK+I ++++NH + + ++G ED F +
Sbjct: 24 TGTLMAVKQVTYVRNTSSEQEEVVEA-LRKEIRLMARLNHPHIIRMLGATCEDSHFN--L 80
Query: 559 VFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616
E+ GS+ L A E + ++ G++Y H +Q I HR+++ +++
Sbjct: 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYL--HENQ----IIHRDVKGANL 134
Query: 617 YL-TEDYAAKISDFSFWNNTTAAKTGSA-------------AMELLETSAVDLESNVYSF 662
+ + +I+DF A TG+ A E+L +V+S
Sbjct: 135 LIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSV 194
Query: 663 GTILFEMITGRISYSIENGS 682
G ++ EM T + ++ E S
Sbjct: 195 GCVIIEMATAKPPWNAEKHS 214
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (102), Expect = 4e-04
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 60/252 (23%)
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--------I 574
+SQ +++ + ++ HKN V I ++ E+ G L ++ I
Sbjct: 56 KSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKI 115
Query: 575 QEAEHLDWAMRLRIAMGMAYCLEHMHQLT-----PPIAHRNLQSSSIYLTEDY------- 622
+E +D +L A+ AYC H L + HR+L+ +I+L+
Sbjct: 116 EEHAIVDITRQLLHAL--AYC----HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169
Query: 623 ----------AAKISDFSFWNNTTAAKTGSAAM--------ELL--ETSAVDLESNVYSF 662
AKI DF N + + ELL ET + D +S++++
Sbjct: 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWAL 229
Query: 663 GTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVDPTLKSFQENVLEELLVVIK 721
G I++E+ +G+ + N + SE +G + P+K KS +EL ++IK
Sbjct: 230 GCIIYELCSGKTPFHKAN-NFSQLISELKRGPDLPIKG------KS------KELNILIK 276
Query: 722 NCVHPDPKQRPS 733
N ++ K+RPS
Sbjct: 277 NLLNLSAKERPS 288
|
Length = 1021 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 45/210 (21%)
Query: 488 DGTVGTVYKG-TLSSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLI 545
+GT G VYK +G +A+ K R D ++ + S ++I L ++NH N V L+
Sbjct: 10 EGTYGVVYKARNKLTGEVVALK----KIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM----RLRIAMGMAYCLEHMHQ 601
+ +VFE+ + L + + + + ++ G+A+C H H+
Sbjct: 66 DVIHTENKL--YLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFC--HSHR 120
Query: 602 LTPPIAHRNLQSSSIYLTEDYAAKISDF------------------SFWNNTTAAKTGSA 643
+ HR+L+ ++ + + A K++DF + W G
Sbjct: 121 ----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 176
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITGR 673
++AVD ++S G I EM+T R
Sbjct: 177 ----YYSTAVD----IWSLGCIFAEMVTRR 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 5e-04
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 320 ASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPSP--SPSESP---SVSSPLIIPPA 374
++ S+++ + SP +V+PS SP L SP +PS SPS SP + SP P +
Sbjct: 576 SAASSNTTFSSDSPSTVVAPSTSPPAGHLGSPPATPSKIVSPSTSPPASHLGSPSTTPSS 635
Query: 375 PVNIPIVSSPPHLHSAPTSFAASTPSQV 402
P + V+S + AST S V
Sbjct: 636 PESSIKVASTETASPESSIKVASTESSV 663
|
Length = 670 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 46/170 (27%)
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH----LDWA 583
++I L ++ H+N VNLI + +VFE+ +H + + E LD
Sbjct: 49 REIRMLKQLRHENLVNLIEVFRRKKRL--YLVFEF------VDHTVLDDLEKYPNGLDE- 99
Query: 584 MRLR-----IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 638
R+R I G+ +C H H I HR+++ +I +++ K+ DF F T A
Sbjct: 100 SRVRKYLFQILRGIEFC--HSHN----IIHRDIKPENILVSQSGVVKLCDFGF--ARTLA 151
Query: 639 KTGSA-----------AMELL--ETS---AVDLESNVYSFGTILFEMITG 672
G A ELL +T AVD +++ G ++ EM+TG
Sbjct: 152 APGEVYTDYVATRWYRAPELLVGDTKYGRAVD----IWAVGCLVTEMLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-04
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 524 SQFRKKIDTLSKVNHKNFVNLI--GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 581
++FR++ +++ H N V L+ G F VFEY P +L E L A
Sbjct: 23 ARFRRETALCARLYHPNIVALLDSGEAPPGLLFA---VFEYVPGRTLREVLAADGALPAG 79
Query: 582 WAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSF------ 631
RL M L+ + I HR+L+ +I +++ AK+ DF
Sbjct: 80 ETGRL-----MLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPG 134
Query: 632 ---WNNTTAAKTGS-------AAMELLETSAVDLESNVYSFGTILFEMITGR 673
+ T +T A E L V S++Y++G I E +TG+
Sbjct: 135 VRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-04
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 588 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGSA-- 643
IA+ L ++ + I HR+++ S+I L + K+ DF S + AKT A
Sbjct: 112 IAVATVKALNYLKE-ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGC 170
Query: 644 ----AMELLETSAV---DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696
A E ++ SA D+ S+V+S G L+E+ TG+ Y N + ++ +KG+ P
Sbjct: 171 RPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQ-LTQVVKGDPP 229
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
I+ + + + I C+ D +RP
Sbjct: 230 ---ILSNSEE---REFSPSFVNFINLCLIKDESKRPK 260
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 6e-04
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 43/272 (15%)
Query: 488 DGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIG 546
+G G V G ++SG VK R S + +F ++ + H N + +G
Sbjct: 5 NGWFGKVILGEVNSG--YTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLRIAMGMAYCLEHMHQLT 603
C E P+ ++V E+ P G L +L L D R+A +A L H+H+
Sbjct: 63 QCTEVTPY--LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120
Query: 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-------TTAAKTGSA----AMELLETSA 652
H +L + LT D KI D+ +N T + A EL++
Sbjct: 121 --FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178
Query: 653 VDL-------ESNVYSFGTILFEMITGRISYSIENGSLENWASE----YLKGEQPLKDIV 701
+L ESNV+S G ++E+ + + + + + E Y EQ LK +
Sbjct: 179 GNLLVVDQTKESNVWSLGVTIWEL------FELGSQPYRHLSDEQVLTYTVREQQLK-LP 231
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
P LK + E V++ C P+QRPS
Sbjct: 232 KPRLKLPLSDRWYE---VMQFCWLQ-PEQRPS 259
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 44/229 (19%)
Query: 521 NLESQFRKKID-------TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH 573
N E+Q K+D S + F + YCE + + E G
Sbjct: 50 NQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRD--LDCKLEELKHTGKTLS--- 104
Query: 574 IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633
E + +W ++L +G+ Y MHQ I HR+L++ +I+L + KI DF
Sbjct: 105 --ENQVCEWFIQL--LLGVHY----MHQRR--ILHRDLKAKNIFLKNNLL-KIGDFGVSR 153
Query: 634 ------NTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE 684
+ TG+ + E L+ D +S+++S G IL+EM ++++ E +
Sbjct: 154 LLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC--LAHAFEG---Q 208
Query: 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
N+ S L+ IV+ S E +L ++++ ++ DP RPS
Sbjct: 209 NFLSVVLR-------IVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPS 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 7e-04
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 558 MVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMG-MAYCLEHMHQLTPPIAHRNLQSS 614
++ +Y G LF HL +E E ++I G + LEH+H+L I +R+++
Sbjct: 82 LILDYINGGELFTHLSQRERFKEQ-----EVQIYSGEIVLALEHLHKLG--IIYRDIKLE 134
Query: 615 SIYLTEDYAAKISDFSFWNNTTAAKTGSA-----AMELLETSAV-------DLESNVYSF 662
+I L + ++DF + A +E + V D + +S
Sbjct: 135 NILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSM 194
Query: 663 GTILFEMITGRISYSI--ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVI 720
G +++E++TG +++ E S + LK E P + K ++++ LL+
Sbjct: 195 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK----DIIQRLLM-- 248
Query: 721 KNCVHPDPKQR 731
DPK+R
Sbjct: 249 -----KDPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 50/279 (17%)
Query: 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKN---LESQFRKKIDTLSKV 536
S ++GS + GTV + +S G AV ++ ++ KN E D S V
Sbjct: 37 SRVLGSGATGTV--LCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIV 94
Query: 537 N-HKNFVNLIGYCEEDEPFTRMM---VFEYSPNGSLFEHLHIQE------AEHLDWAMRL 586
H++F + P +M V +Y+ G L + + + EH + +
Sbjct: 95 KCHEDFA----KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFI 150
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTAAKTGSA 643
++ + + H+H + + HR+++S++I L + K+ DF F + T + G
Sbjct: 151 QVLLA----VHHVH--SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRT 204
Query: 644 --------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE- 694
A E+ +++++S G +L+E++T + + EN +E + L G
Sbjct: 205 FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN--MEEVMHKTLAGRY 262
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
PL + P E+ ++ + DPK+RPS
Sbjct: 263 DPLPPSISP-----------EMQEIVTALLSSDPKRRPS 290
|
Length = 496 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 9e-04
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 533 LSKVNHKNFVNL-IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA-MRLRIA- 589
L ++NH VNL + +E+ + +V + G L H+ + ++ I
Sbjct: 54 LQELNHPFLVNLWYSFQDEENMY---LVVDLLLGGDL--RYHLSQKVKFSEEQVKFWICE 108
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTG 641
+ +A LE++H + I HR+++ +I L E I+DF +T+ G
Sbjct: 109 IVLA--LEYLH--SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPG 164
Query: 642 SAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 686
A E+L + + +S G +E + G+ Y + ++ +
Sbjct: 165 YMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ 209
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 0.001
Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 57/269 (21%)
Query: 489 GTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG- 546
G+ G VYKG + E+ A+ ++ D ++++ ++I LS+ + G
Sbjct: 15 GSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQ----QEITVLSQCDSPYITRYYGS 70
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR-IAMGMAYCLEHMHQLTPP 605
Y + + + ++ EY GS + L E A LR I G L+++H +
Sbjct: 71 YLKGTKLW---IIMEYLGGGSALDLLKPGPLEETYIATILREILKG----LDYLH--SER 121
Query: 606 IAHRNLQSSSIYLTEDYAAKISDF---------SFWNNTTAAKTGSAAMELLETSAVDLE 656
HR+++++++ L+E K++DF NT A E+++ SA D +
Sbjct: 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFK 181
Query: 657 SNVYSFGTILFEMITG----------RISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
++++S G E+ G R+ + I S +Y K P K+ V+
Sbjct: 182 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSK---PFKEFVEA--- 235
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMR 735
C++ DP+ RP+ +
Sbjct: 236 ----------------CLNKDPRFRPTAK 248
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 0.001
Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 44/252 (17%)
Query: 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
IGS + G V Y L V I S +++ + + +R+ + + VNHKN +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT----HAKRAYRELV-LMKCVNHKNII 86
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSL--FEHLHIQEAEHLDWAMRLRIAMG-----MAYC 595
L+ ++P SL F+ ++I E +D + I M M+Y
Sbjct: 87 GLLNV--------------FTPQKSLEEFQDVYIV-MELMDANLCQVIQMELDHERMSYL 131
Query: 596 LEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTTAAKTGS 642
L M H + I HR+L+ S+I + D KI DF SF
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI-- 700
A E++ +++S G I+ EMI G + + + ++ W + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPEFMK 250
Query: 701 -VDPTLKSFQEN 711
+ PT++++ EN
Sbjct: 251 KLQPTVRTYVEN 262
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 608 HRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSA-------AMELLETSAVDLE 656
HR+L + +I L+E+ KI DF + + + GSA A E + +
Sbjct: 197 HRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQ 256
Query: 657 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 716
S+V+SFG +L+E+ + + S G N E+ + + D T EN E+
Sbjct: 257 SDVWSFGVLLWEIFS--LGASPYPGVQIN--------EEFCQRLKDGTRMRAPENATPEI 306
Query: 717 LVVIKNCVHPDPKQRPS 733
++ C DPK+RP+
Sbjct: 307 YRIMLACWQGDPKERPT 323
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 85/296 (28%)
Query: 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHK 539
+IG +GT G VYK +G +A+ + ++ E + +++ + L K NH
Sbjct: 13 VIG---EGTYGKVYKARHKKTGQLVAIKIMDII------EDEEEEIKEEYNILRKYSNHP 63
Query: 540 NFVNLIG-------YCEEDEPFTRMMVFEYSPNGS---LFEHLHIQ----EAEHLDWAMR 585
N G +D+ + +V E GS L + L + + E + + +R
Sbjct: 64 NIATFYGAFIKKNPPGNDDQLW---LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS- 642
G+AY H ++ + HR+++ +I LT++ K+ DF S ++T + +
Sbjct: 121 -ETLRGLAYL--HENK----VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTF 173
Query: 643 ------------AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690
A E + S D S+V+S G IT IE
Sbjct: 174 IGTPYWMAPEVIACDEQPDAS-YDARSDVWSLG------ITA-----IELA--------- 212
Query: 691 LKGEQPLKDI------------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
G+ PL D+ PTLKS EN ++ I C+ + +QRP M
Sbjct: 213 -DGKPPLCDMHPMRALFKIPRNPPPTLKS-PENWSKKFNDFISECLIKNYEQRPFM 266
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (95), Expect = 0.001
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 26/204 (12%)
Query: 488 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIG 546
+GT G VYKG ++A D + + E + +++I+ L K +H +N G
Sbjct: 16 NGTYGQVYKGRHVKTGQLAAIKV-----MDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 70
Query: 547 -YCEEDEPFTR---MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL 602
+ +++ P +V E+ GS+ + + + L I + L H+HQ
Sbjct: 71 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ- 129
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAMELLET--- 650
+ HR+++ ++ LTE+ K+ DF NT A E++
Sbjct: 130 -HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN 188
Query: 651 --SAVDLESNVYSFGTILFEMITG 672
+ D +S+++S G EM G
Sbjct: 189 PDATYDFKSDLWSLGITAIEMAEG 212
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822) | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.002
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 296 VQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSP 355
V+P +R+ + E ++ S SS SP PS PS S+ + S P
Sbjct: 62 VEPDGTTYRKG-CKPLERMEGAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFP 120
Query: 356 SPSPSESPSVSSPLIIPPAPVNIPIVSS 383
SPS +S +SS + P + +VSS
Sbjct: 121 SPSSLDSIPISSAASLLPWLSVLSLVSS 148
|
This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
LK +EL+ ++GS G GTVYKG E ++K R + S +
Sbjct: 4 LKETELKKV-----KVLGS---GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 55
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEAEHL 580
+ ++ V L+G C T +V + P G L +++ I + L
Sbjct: 56 ILDEAYVMAGVGSPYVCRLLGICLTS---TVQLVTQLMPYGCLLDYVRENKDRIGSQDLL 112
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW-----NNT 635
+W ++IA GM+Y LE + + HR+L + ++ + KI+DF + T
Sbjct: 113 NWC--VQIAKGMSY-LEEVR-----LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164
Query: 636 TAAKTGSA------AMELLETSAVDLESNVYSFGTILFEMIT 671
G A+E + +S+V+S+G ++E++T
Sbjct: 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 31/143 (21%)
Query: 606 IAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTGSA---AMELLETSAVDLE 656
+ HR+++S SI LT D K+SDF F + + G+ A E++ + E
Sbjct: 138 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTE 197
Query: 657 SNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE------ 710
+++S G ++ EM+ G Y ++ ++ + L+D P LK+ +
Sbjct: 198 VDIWSLGIMVIEMVDGEPPY---------FSDSPVQAMKRLRDSPPPKLKNAHKISPVLR 248
Query: 711 NVLEELLVVIKNCVHPDPKQRPS 733
+ LE +L +P++R +
Sbjct: 249 DFLERMLT-------REPQERAT 264
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 45/225 (20%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 592
+ +V+HK+ V L G C D +MV E+ G L +H ++++ L + ++A +
Sbjct: 58 MRQVSHKHIVLLYGVCVRDV--ENIMVEEFVEFGPLDLFMH-RKSDVLTTPWKFKVAKQL 114
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-------AKISD-----FSFWNNTTAAKT 640
A L ++ + H N+ + +I L + K+SD +
Sbjct: 115 ASALSYLED--KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERI 172
Query: 641 GSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
A E +E S + ++ +SFGT L+E I Y+ GE PLKD
Sbjct: 173 PWIAPECVEDSKNLSIAADKWSFGTTLWE-----ICYN---------------GEIPLKD 212
Query: 700 IVDPTLKSFQENVL-------EELLVVIKNCVHPDPKQRPSMRGI 737
+ F E +EL ++ +C++ DP QRP R I
Sbjct: 213 KTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAI 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.002
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 497 GTLSSG-VEIAVTSTSVKSRADWSKNLESQFRKK-----IDTLSKVNHKNFVNLI-GYCE 549
G S+G V IA + K A +L Q R++ + + +H+N V++ Y
Sbjct: 31 GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV 90
Query: 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHR 609
DE + M E + H + E + + + + L ++H + HR
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQ------IATVCLSVLRALSYLH--NQGVIHR 142
Query: 610 NLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSA---AMELLETSAVDLESNVY 660
+++S SI LT D K+SDF F + + G+ A E++ E +++
Sbjct: 143 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIW 202
Query: 661 SFGTILFEMITGRISY 676
S G ++ EMI G Y
Sbjct: 203 SLGIMVIEMIDGEPPY 218
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 23/104 (22%), Positives = 27/104 (25%), Gaps = 2/104 (1%)
Query: 311 TNGFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLI 370
+ A S+P SSS P P S S P S P
Sbjct: 175 EDADPASASPSDPPSSSP--GVPSFPSPPEDPSSPSDSSLPPAPSSFQSDTPPPSPESPT 232
Query: 371 IPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVHESLHKSKHHTV 414
P P PP P S A TP + T+
Sbjct: 233 NPSPPPGPAAPPPPPVQQVPPLSTAKPTPPSASATPAPIGGITL 276
|
Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 33/260 (12%)
Query: 489 GTVGTVYKG-TLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G VY +G E+AV + + + +I L + H+ V G
Sbjct: 13 GAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGC 72
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMAYCLEHMHQLTPP 605
+ T + E+ P GS+ + L A E++ +I G++Y +M
Sbjct: 73 LRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM------ 126
Query: 606 IAHRNLQSSSIYLTEDYAAKISDFSFWNN-TTAAKTGSAAM-----------ELLETSAV 653
I HR+++ ++I K+ DF T +G+ E++
Sbjct: 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGY 186
Query: 654 DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713
+++++S G + EM+T + ++ E A+ + QP ++ P + + L
Sbjct: 187 GRKADIWSVGCTVVEMLTEKPPWA----EFEAMAAIFKIATQPTNPVLPPHVSDHCRDFL 242
Query: 714 EELLVVIKNCVHPDPKQRPS 733
+ + V + K RPS
Sbjct: 243 KRIFV--------EAKLRPS 254
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.004
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617
++ EY G LF HL + D A + +A LEH+HQ I +R+L+ +I
Sbjct: 77 LILEYLSGGELFMHLEREGIFMEDTACFYLSEISLA--LEHLHQQG--IIYRDLKPENIL 132
Query: 618 LTEDYAAKISDFS------FWNNTTAAKTGS---AAMELLETS----AVDLESNVYSFGT 664
L K++DF T G+ A E+L S AVD +S G
Sbjct: 133 LDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDW----WSLGA 188
Query: 665 ILFEMITGRISYSIEN 680
++++M+TG ++ EN
Sbjct: 189 LMYDMLTGAPPFTAEN 204
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.004
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 313 GFEAKRKASEPSSSSSIASSPEPLVSPSLSPSMSSLLS-----------PSFSPSPSPSE 361
+ + PSS S + P S S S S S S + SP PSPS
Sbjct: 290 SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSR 349
Query: 362 SPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPS 400
SPS S PP P + P AP+S AAS
Sbjct: 350 SPSPSR----PPPPADPSSPRKRPRPSRAPSSPAASAGR 384
|
Length = 1352 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.004
Identities = 53/249 (21%), Positives = 92/249 (36%), Gaps = 35/249 (14%)
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 582
ES + L KVN + VNL E + +V G L H++ +
Sbjct: 44 ESMALNEKQILEKVNSQFVVNLAYAYETKDALC--LVLTIMNGGDLKFHIYNMGNPGFEE 101
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT-- 640
L A + LE +H+ +R+L+ +I L + +ISD ++
Sbjct: 102 ERALFYAAEILCGLEDLHR--ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR 159
Query: 641 ------GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
G A E+L L + + G +++EMI G+ + E +K E
Sbjct: 160 GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK--------EKVKRE 211
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR--------------PSMRGIAAK 740
+ + +++ T + + EE + K + DPKQR P R + K
Sbjct: 212 EVDRRVLE-TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270
Query: 741 LKEITAMEP 749
E ++P
Sbjct: 271 RLEAGMLDP 279
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 772 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.98 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.98 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.98 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.98 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.98 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.98 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.98 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.98 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.98 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.98 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.96 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.95 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.95 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.95 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.93 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.92 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.92 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.92 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.92 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.92 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.88 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.84 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.82 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.81 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.8 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.8 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.79 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.77 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.74 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.73 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.73 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.72 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.71 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.7 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.69 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.68 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.68 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.65 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.65 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.64 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.63 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.61 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.56 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.53 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.52 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.51 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.5 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.39 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.35 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.31 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.15 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.15 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.0 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.95 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.91 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 98.9 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.89 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.88 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.83 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.82 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.77 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.69 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 98.68 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 98.63 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.6 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.59 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.54 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.54 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.46 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 98.42 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.41 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.36 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.27 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.26 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 98.24 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.21 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.2 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.17 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.15 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.13 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.11 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.1 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.08 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.07 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.05 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.04 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.01 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 97.98 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 97.97 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.97 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 97.88 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 97.86 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.84 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.83 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.77 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 97.7 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 97.7 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.66 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.57 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.54 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.52 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 97.52 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 97.48 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.48 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 97.45 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 97.37 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 97.36 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 97.31 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 97.24 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 97.21 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 97.19 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-53 Score=525.48 Aligned_cols=490 Identities=22% Similarity=0.360 Sum_probs=321.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.+.|.+|..+ ..++|+.|+|++|.++|.+|..+.++++|+.|+|++|+++|.+|..++++++|++|+|
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 356778888888888877654 4578888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccccccCCCCccccccCCCChhhhhhhhccccccccccccCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTNGFEAKRKASEPSSSSS 328 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 328 (772)
++|.++|.+|..+..+++|+.|+|++|.++|.+|........+ ...++..|.+.+..|.... +.
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L----------~~l~ls~N~l~~~~p~~~~------~~ 594 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESL----------VQVNISHNHLHGSLPSTGA------FL 594 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCccc----------CEEeccCCcceeeCCCcch------hc
Confidence 8888888888888888888888888888888887642221111 0111222333222221000 00
Q ss_pred cCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 004124 329 IASSPEPLVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIVSSPPHLHSAPTSFAASTPSQVHESLHK 408 (772)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (772)
. + ....+.+++. .+........+++. ...
T Consensus 595 ~------------------~------------------~~~~~~~n~~---lc~~~~~~~~~~c~------------~~~ 623 (968)
T PLN00113 595 A------------------I------------------NASAVAGNID---LCGGDTTSGLPPCK------------RVR 623 (968)
T ss_pred c------------------c------------------ChhhhcCCcc---ccCCccccCCCCCc------------ccc
Confidence 0 0 0000000000 00000000001110 000
Q ss_pred CcccceeehhHHHHHHHHHHHHHHHHHHhhcCcccccCCCccCCcchhhhhhhc--CCCCCCHHHHHHHhhccccccccc
Q 004124 409 SKHHTVLVLAGIIGGLSLILISAIGFFVCRSSKVVTVKPWVTGLSGQLQKAFVT--GVPKLKRSELEAACEDFSNIIGSF 486 (772)
Q Consensus 409 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~el~~~~~~f~~iig~l 486 (772)
+......++++++++++++++++++++++|+++....+..... .+.+...... ....+...++. .++ +....+
T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~i 698 (968)
T PLN00113 624 KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENE-DGTWELQFFDSKVSKSITINDIL---SSL-KEENVI 698 (968)
T ss_pred ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-cccccccccccccchhhhHHHHH---hhC-CcccEE
Confidence 1111223333333333333333334444444332211111110 0001000000 01122333333 233 234567
Q ss_pred CccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccCC
Q 004124 487 SDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPN 565 (772)
Q Consensus 487 g~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~ 565 (772)
|+|+||.||+|+. .++..||||++..... ...+|++.+++++|||||+++|+|.+.+ ..++|||||++
T Consensus 699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~l~~l~HpnIv~~~~~~~~~~--~~~lv~Ey~~~ 767 (968)
T PLN00113 699 SRGKKGASYKGKSIKNGMQFVVKEINDVNS---------IPSSEIADMGKLQHPNIVKLIGLCRSEK--GAYLIHEYIEG 767 (968)
T ss_pred ccCCCeeEEEEEECCCCcEEEEEEccCCcc---------ccHHHHHHHhhCCCCCcceEEEEEEcCC--CCEEEEeCCCC
Confidence 8899999999996 5788999998753221 1234688999999999999999998876 56999999999
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC-----CCCC
Q 004124 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-----TAAK 639 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-----~~~~ 639 (772)
|+|.++++ .++|..+.+|+.|+|+||+|||.. .++|+||||||+||+++.++.+++. ||..... ..++
T Consensus 768 g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t 841 (968)
T PLN00113 768 KNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFIS 841 (968)
T ss_pred CcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCcccc
Confidence 99999984 389999999999999999999953 4569999999999999999888875 5554321 2334
Q ss_pred ccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC---CCCHHHHHHHHhhcCCCCccccCCccc---cccHHHH
Q 004124 640 TGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE---NGSLENWASEYLKGEQPLKDIVDPTLK---SFQENVL 713 (772)
Q Consensus 640 ~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~l~---~~~~~~~ 713 (772)
..|+|||.+.+..++.|+|||||||++|||+||+.||+.. .....+|.+..... .....++|+.+. ....+..
T Consensus 842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 920 (968)
T PLN00113 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDVSVNQNEI 920 (968)
T ss_pred ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc-cchhheeCccccCCCCccHHHH
Confidence 6899999999999999999999999999999999998643 34566676554432 233445555543 2334566
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.++.+++.+||+.||++||+|+||+++|+++.+...
T Consensus 921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~ 956 (968)
T PLN00113 921 VEVMNLALHCTATDPTARPCANDVLKTLESASRSSS 956 (968)
T ss_pred HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence 788999999999999999999999999999877544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-51 Score=446.51 Aligned_cols=275 Identities=41% Similarity=0.705 Sum_probs=236.8
Q ss_pred CCCCCCHHHHHHHhhccc--ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc
Q 004124 463 GVPKLKRSELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540 (772)
Q Consensus 463 ~~~~~~~~el~~~~~~f~--~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN 540 (772)
....|++.|+.+||++|+ +++ |+|+||.||+|.++++..||||++...... . .++|.+|++++++++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~----~-~~eF~~Ei~~ls~l~H~N 132 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ----G-EREFLNEVEILSRLRHPN 132 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCc----c-hhHHHHHHHHHhcCCCcC
Confidence 345689999999999997 454 568899999999999999999976543321 1 356999999999999999
Q ss_pred ccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEEC
Q 004124 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 541 IV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld 619 (772)
+|+++|||.+.+. +.+||||||++|+|.++|+......++|.+|++||.++|+||+|||+ +.|+|||||||++|||||
T Consensus 133 lv~LlGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 133 LVKLLGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred cccEEEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 9999999998773 37999999999999999986543388999999999999999999997 667999999999999999
Q ss_pred CCCcEEEccccCccCCC----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccC----CCCCHHH
Q 004124 620 EDYAAKISDFSFWNNTT----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI----ENGSLEN 685 (772)
Q Consensus 620 ~~~~~kLsDFGla~~~~----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~----~~~~~~~ 685 (772)
+++++||+|||+++... .++.+|+|||+...+..+.|+|||||||+|+||+||+.+.+. ....+.+
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~ 291 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE 291 (361)
T ss_pred CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence 99999999999987654 456689999999999999999999999999999999998873 2345889
Q ss_pred HHHHHhhcCCCCccccCCccc--cccH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 686 WASEYLKGEQPLKDIVDPTLK--SFQE-NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~--~~~~-~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
|+...+... .+.+++|+.+. .+.. ....++..++.+|++.+|++||+|.||+++|+.+...
T Consensus 292 w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 292 WAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 987777664 78899999985 4443 5778899999999999999999999999999766544
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-46 Score=404.50 Aligned_cols=249 Identities=31% Similarity=0.450 Sum_probs=207.3
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
..+|.|+||+||+|.+.....||||++......+. ..++|.+|+.+|.+++|||||+++|+|.++.. ..++|||||
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~---~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy~ 122 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDE---SRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEYM 122 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChH---HHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEeC
Confidence 34789999999999998666699999876554332 26789999999999999999999999988642 368999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC------
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT------ 636 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~~------ 636 (772)
++|+|.++++......++|..+++|+.|||+||.|||+++| ||||||||+|||++.++ ++||+|||+++...
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~ 201 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSM 201 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCccceeeccccccc
Confidence 99999999986556789999999999999999999999887 99999999999999997 99999999986332
Q ss_pred ---CCCccccchhhhc--cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 ---AAKTGSAAMELLE--TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 ---~~~~~~~aPE~~~--~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|||||++. ...|+.|+|||||||+||||+||+.||..... .+.+..+..... ....+..
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~---------Rp~~p~~ 270 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGL---------RPPIPKE 270 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCC---------CCCCCcc
Confidence 4556799999999 66999999999999999999999999964332 333333332211 1122334
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+...+..+|.+||..||++||++.|++..|+.+....
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 6778999999999999999999999999999886643
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=401.58 Aligned_cols=246 Identities=27% Similarity=0.451 Sum_probs=213.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+++.+||+|.||.||.|.++....||+|.++..... .+.|.+|+++|++|+|+|||+++|+|..++ -.+|||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~------~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--piyIVt 280 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS------PEAFLREAQIMKKLRHEKLVKLYGVCTKQE--PIYIVT 280 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccC------hhHHHHHHHHHHhCcccCeEEEEEEEecCC--ceEEEE
Confidence 457889999999999999998889999999876433 367999999999999999999999999877 469999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC--
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA-- 638 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~-- 638 (772)
|||++|+|.++|+......+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+++.....
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 9999999999998766778999999999999999999999988 999999999999999999999999999843321
Q ss_pred --------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 639 --------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 639 --------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
...|.|||.+..++++.|||||||||+||||+| |+.||. +....+.+..+-+|.+ ...+
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~--~msn~ev~~~le~GyR----------lp~P 426 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP--GMSNEEVLELLERGYR----------LPRP 426 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC--CCCHHHHHHHHhccCc----------CCCC
Confidence 235789999999999999999999999999999 999984 4455555555555532 1235
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+.|+++++++|..||+.+|++||||+.+...|+++....
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 678899999999999999999999999999998876543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=371.64 Aligned_cols=240 Identities=21% Similarity=0.323 Sum_probs=202.6
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.++.+|+|..|+|||++++ +++.+|.|.+... ......+++.+|++++.+.+||+||++||.|+.+.. ...|+|
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~----~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~m 157 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN----IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICM 157 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc----CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeeh
Confidence 4678899999999999976 6778888888433 235567889999999999999999999999998774 489999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
|||.+|+|.+++.. .+.+++...-+|+.+|.+||.|||+ ++ ||||||||+|||++..|++||||||.++.
T Consensus 158 EYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~ 233 (364)
T KOG0581|consen 158 EYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI 233 (364)
T ss_pred hhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccCCCEEeccccccHHhhhhh
Confidence 99999999999853 3668999999999999999999995 66 99999999999999999999999998753
Q ss_pred --CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC---CCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 635 --TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN---GSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 --~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
...|+..|||||.+.+..|+.++||||||++++|+++|+.||.... .+..+.+..++.+. .+..+
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p----------pP~lP 303 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP----------PPRLP 303 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC----------CCCCC
Confidence 3457788999999999999999999999999999999999997642 24444444444332 22233
Q ss_pred H-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 E-NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~-~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+ .+++++.+++..|+++||.+||+++|+++.
T Consensus 304 ~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 304 EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred cccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 4 378899999999999999999999999874
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=398.99 Aligned_cols=250 Identities=27% Similarity=0.438 Sum_probs=209.5
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
....++|+|+||+||+|+.. +...||||.++.+.. ...+.+|++|++++..++|||||+++|+|.++++
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~----~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P- 563 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE----NQARQDFRREAELLAELQHPNIVRLLGVCREGDP- 563 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc----HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe-
Confidence 45678999999999999853 345788988765432 3457899999999999999999999999999986
Q ss_pred eEEEEEeccCCCChhhhhhhhc------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
.+||+|||..|||.++|.... ...|+..+.+.||.|||.||+||-++. +|||||..+|+||.++.
T Consensus 564 -~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 -LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGENL 640 (774)
T ss_pred -eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceeccce
Confidence 499999999999999996431 123889999999999999999998877 99999999999999999
Q ss_pred cEEEccccCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHH
Q 004124 623 AAKISDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEY 690 (772)
Q Consensus 623 ~~kLsDFGla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~ 690 (772)
.+||+|||+++..... ...||+||.+..++||++||||||||||||++| |+.||.+- +-.+.+..+
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl--Sn~EVIe~i 718 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL--SNQEVIECI 718 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc--chHHHHHHH
Confidence 9999999999865432 236899999999999999999999999999999 99999532 223333333
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..+ .+-+.+++++.++++||..||+.+|++||+++||-..|+...+..+.
T Consensus 719 ~~g----------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 719 RAG----------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred HcC----------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 222 23345688999999999999999999999999999999998776543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=368.96 Aligned_cols=240 Identities=20% Similarity=0.344 Sum_probs=208.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.-..+|+|+|+++|+++. .+|..||+|++.++.... ....++..+||++.++|+|||||+++++|++.+ ..||
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k--~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~--nVYi 95 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK--PKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN--NVYI 95 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC--cchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC--ceEE
Confidence 45666788999999999997 899999999998765433 445678999999999999999999999999988 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|.|+|++|+|.++++ ..+.+++..+..+..||+.||.|||+.+ |+|||||..|++|++++++||+|||+|...
T Consensus 96 vLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 96 VLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999985 5678999999999999999999999998 999999999999999999999999998643
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..|++.|.|||++.....+..+||||+|||||-|++|++||. ..++.+....+...+.. ++
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe--tk~vkety~~Ik~~~Y~-----------~P 238 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE--TKTVKETYNKIKLNEYS-----------MP 238 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc--cchHHHHHHHHHhcCcc-----------cc
Confidence 357888999999999999999999999999999999999995 44455555554444322 23
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.+..+||.++|+.+|.+|||+++|+..
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 3566788999999999999999999999864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=351.25 Aligned_cols=238 Identities=25% Similarity=0.393 Sum_probs=191.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+..++|.|+||+||+|+++ ++..||||.+..+.. .....+.+..|+++|+.++|||||.++++++.++ ..+||
T Consensus 13 ~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~--~i~lV 87 (429)
T KOG0595|consen 13 ELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD--FIYLV 87 (429)
T ss_pred eehhhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC--eEEEE
Confidence 45566999999999999964 678999999876643 2345667899999999999999999999999988 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC------CcEEEccccCcc
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED------YAAKISDFSFWN 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~------~~~kLsDFGla~ 633 (772)
||||.+|||.+|++. .+.+++.....++.|+|.||++||+.+ ||||||||.||||+.. -.+||+|||+++
T Consensus 88 MEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999964 457999999999999999999999998 9999999999999764 568999999998
Q ss_pred CCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .|.+.|||||++..++|+.|+|+||.|+||||+++|+.||+.. +..+....+.++...+.
T Consensus 164 ~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~--t~~eL~~~~~k~~~~~~------- 234 (429)
T KOG0595|consen 164 FLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE--TPKELLLYIKKGNEIVP------- 234 (429)
T ss_pred hCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc--CHHHHHHHHhccccccC-------
Confidence 654 3567899999999999999999999999999999999999643 34444444333322111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ev 737 (772)
..+........+++..-++.+|.+|-++.+-
T Consensus 235 -~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 235 -VLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred -chhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 1122233344566666667777777665553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-42 Score=355.27 Aligned_cols=252 Identities=23% Similarity=0.362 Sum_probs=202.9
Q ss_pred HhhcccccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhh--hHHHHHHHHHHHHhcCCCCcccceeEEEEcC
Q 004124 475 ACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK--NLESQFRKKIDTLSKVNHKNFVNLIGYCEED 551 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~--~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~ 551 (772)
..++++.+.+.+|.|+||.|-+|. .++|+.||||++.+......+. .......+|+++|++++|||||++++++..+
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 356778888999999999999998 5689999999998765444332 1223357999999999999999999999988
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEcc
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISD 628 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsD 628 (772)
+ ..|||||||.+|+|.+.+-. .+.+....-..+++|++.|+.|||+.| |+||||||+|||+..+ ..+||+|
T Consensus 249 d--s~YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 249 D--SSYMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred C--ceEEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecc
Confidence 8 66999999999999999853 345667777889999999999999999 9999999999999654 7899999
Q ss_pred ccCccCC--------CCCCccccchhhhccCCC---CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 629 FSFWNNT--------TAAKTGSAAMELLETSAV---DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 629 FGla~~~--------~~~~~~~~aPE~~~~~~~---s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
||+|+.. ..|++.|.|||++.+..+ ..|.|+||+|||||-+++|..||..+.+.. .....+.++...+
T Consensus 323 FGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQI~~G~y~f 401 (475)
T KOG0615|consen 323 FGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQILKGRYAF 401 (475)
T ss_pred cchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHHHhcCcccc
Confidence 9999865 346789999999865543 358899999999999999999997554432 1223333443222
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .......++..++|.++|..||++|||+.|+++.
T Consensus 402 ~p-------~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 402 GP-------LQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cC-------hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11 1224677899999999999999999999999863
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=377.57 Aligned_cols=262 Identities=20% Similarity=0.355 Sum_probs=216.7
Q ss_pred CCCCCHHHHHHHhhccc--------ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHH
Q 004124 464 VPKLKRSELEAACEDFS--------NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKID 531 (772)
Q Consensus 464 ~~~~~~~el~~~~~~f~--------~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~ 531 (772)
+..++|+|-.+|...|. .|-+.||.|.||.||+|+++ ....||||.++... .+..+.+|+.|+.
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy----tekqrrdFL~EAs 682 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY----TEKQRRDFLSEAS 682 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc----cHHHHhhhhhhhh
Confidence 34567777777777765 34567899999999999975 23568888876543 4556789999999
Q ss_pred HHhcCCCCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCC
Q 004124 532 TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL 611 (772)
Q Consensus 532 ~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDL 611 (772)
||++++||||++|.|+.....+ .+||.|||+||+|+.+|+.+. +.+++.+..-+.+|||.||.||-+.+ +|||||
T Consensus 683 IMGQFdHPNIIrLEGVVTks~P--vMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~--YVHRDL 757 (996)
T KOG0196|consen 683 IMGQFDHPNIIRLEGVVTKSKP--VMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDL 757 (996)
T ss_pred hcccCCCCcEEEEEEEEecCce--eEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC--chhhhh
Confidence 9999999999999999998874 599999999999999997654 55999999999999999999999988 999999
Q ss_pred CCCCeEECCCCcEEEccccCccCCCCCC------------ccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccC
Q 004124 612 QSSSIYLTEDYAAKISDFSFWNNTTAAK------------TGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSI 678 (772)
Q Consensus 612 Kp~NILld~~~~~kLsDFGla~~~~~~~------------~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~ 678 (772)
.++|||++.+...||+|||+++...... ..|.|||.+..+++|.+||||||||||||.++ |.+||.
T Consensus 758 AARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW- 836 (996)
T KOG0196|consen 758 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW- 836 (996)
T ss_pred hhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc-
Confidence 9999999999999999999998653321 25789999999999999999999999999998 999985
Q ss_pred CCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+.+-.+.++.+..+- .+ +.+.+++..+.+||+.||++|-.+||.|.+|+..|+++..
T Consensus 837 -dmSNQdVIkaIe~gy-RL---------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 837 -DMSNQDVIKAIEQGY-RL---------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred -ccchHHHHHHHHhcc-CC---------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 223333344333331 11 2345788899999999999999999999999999988643
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=336.56 Aligned_cols=247 Identities=21% Similarity=0.347 Sum_probs=204.9
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEE-EEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY-CEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~-~~~~~~~~~~L 558 (772)
++++++|.|+||+|||+. ..+|..+|.|.+.... .....+.....|+.+|++|+|||||+++++ +.++.. -.+|
T Consensus 22 ~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~---md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e-vlni 97 (375)
T KOG0591|consen 22 QILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM---MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE-VLNI 97 (375)
T ss_pred HHHHHHcCCcchheEEeeeccCcchhhhhhcchhh---ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch-hhHH
Confidence 577889999999999998 5688999999887433 234556789999999999999999999994 333331 3689
Q ss_pred EEeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcCCCC--eEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 559 VFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPP--IAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~--IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
|||||..|||...++. +..+.+++...+++..|+++||.++|+.-++ |+||||||.||+|+.+|.+||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999863 2456799999999999999999999995555 99999999999999999999999999874
Q ss_pred C---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 635 T---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ..|+++||+||.+....|+.||||||+||++|||+.-+.||.+. ++.+.-+++-.++.
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~qgd~---------- 245 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQGDY---------- 245 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHcCCC----------
Confidence 3 34788999999999999999999999999999999999999654 55555555544422
Q ss_pred cccc-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 706 KSFQ-ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 706 ~~~~-~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
+..+ +..+.++.+||..|+..||+.||+.-.++..+..
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 2233 5678899999999999999999986666655544
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=345.54 Aligned_cols=262 Identities=24% Similarity=0.341 Sum_probs=214.3
Q ss_pred hcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++| ++++.+|+|+||+||.++. ++++.+|+|+++++.... ....+....|..+|.+++||+||+++-.+++.+ .
T Consensus 25 ~dF-~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~--~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~--k 99 (357)
T KOG0598|consen 25 DDF-EILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE--KKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE--K 99 (357)
T ss_pred hhe-eeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh--hhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC--e
Confidence 345 6788899999999999985 567889999988765443 334567889999999999999999999898877 7
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN- 634 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~- 634 (772)
.|||+||+.||.|..+|. +.+.+++..+.-++..|+.||.|||+.+ ||||||||+|||||++|+++|+|||+++.
T Consensus 100 LylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 899999999999999985 4567889888899999999999999999 99999999999999999999999999862
Q ss_pred --------CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 635 --------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 --------~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
...|+..|||||++....|+..+|+||+||++|||+||..||.. .+..++...+.++..+
T Consensus 176 ~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~--~~~~~~~~~I~~~k~~---------- 243 (357)
T KOG0598|consen 176 LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA--EDVKKMYDKILKGKLP---------- 243 (357)
T ss_pred ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC--ccHHHHHHHHhcCcCC----------
Confidence 23567889999999999999999999999999999999999964 4456666666655311
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhhh
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILS 768 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~~ 768 (772)
..+.-...+..+++.+.++.||++|-... ........+|.+...+|+++...+
T Consensus 244 ~~p~~ls~~ardll~~LL~rdp~~RLg~~---------~d~~~ik~HpfF~~inW~~l~~k~ 296 (357)
T KOG0598|consen 244 LPPGYLSEEARDLLKKLLKRDPRQRLGGP---------GDAEEIKRHPFFKGINWEKLLAKK 296 (357)
T ss_pred CCCccCCHHHHHHHHHHhccCHHHhcCCC---------CChHHhhcCcccccCCHHHHHhcC
Confidence 11222456788999999999999996411 011113457888899999986543
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=364.13 Aligned_cols=248 Identities=27% Similarity=0.494 Sum_probs=204.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+...||.|.||+||+|+|.. .||||++...... ....+.|+.|+.++++-||.||+-+.|||..+. . .||+
T Consensus 395 ~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt---~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--~-AIiT 466 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPT---PEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--L-AIIT 466 (678)
T ss_pred hccceeccccccceeeccccc--ceEEEEEecCCCC---HHHHHHHHHHHHHHhhcchhhheeeehhhcCCc--e-eeee
Confidence 466788999999999999873 5899999876543 346688999999999999999999999999876 3 8999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
.+|++-+|+.++|..+ ..++..+.+.||.|||+||.|||.++ |||||||..||++++++.+||+|||++....
T Consensus 467 qwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred hhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 9999999999998654 56899999999999999999999998 9999999999999999999999999975321
Q ss_pred -------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 -------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 -------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.+...|||||+++ ...|++.+||||||||+|||+||..||.....+..-|+ +-.| ...+.+.
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm--VGrG------~l~pd~s 615 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM--VGRG------YLMPDLS 615 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE--eccc------ccCccch
Confidence 2234689999985 45799999999999999999999999974333221111 1111 1112223
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
....++..++.+|+..||..++++||.+.+|+..|+++...
T Consensus 616 ~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 616 KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 33456778999999999999999999999999999887763
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=356.72 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=206.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+.+++|+|.||.|..+....+..||||+++... ..+.+++|.+|+++|.+++|||||+++|+|..+++. ++|+
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a----~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi--cmI~ 614 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA----TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL--CMIT 614 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCccc----chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch--HHHH
Confidence 5678999999999999999988999999886543 345678999999999999999999999999998854 8999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCC-
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK- 639 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~~- 639 (772)
|||++|+|.+++.....+.+.-....+|+.|||.||+||.+++ +||||+.++|||+|.++++||+|||+++....+.
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 9999999999997665555555667789999999999999999 9999999999999999999999999999665543
Q ss_pred ----------ccccchhhhccCCCCCCCchHHHHHHHHHHHc--CCCcccCC-CCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 640 ----------TGSAAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIE-NGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 640 ----------~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt--G~~P~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
-.|||+|.+.-+++|++||||+|||+|||+++ ...||..- +....+-...++.+... ....
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~------~~~l 766 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR------QVVL 766 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc------ceec
Confidence 36899999999999999999999999999987 67888532 12222222222222111 1112
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+.-++.+++++|.+||..|.++||+++++...|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 23456778899999999999999999999999988764
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=380.41 Aligned_cols=248 Identities=27% Similarity=0.425 Sum_probs=203.9
Q ss_pred ccccccCccceEEEEEEEEcC--C----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--G----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--~----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+....+|+|.||.||+|.+.+ + ..||||.+.... +.....+|.+|..+|++++|||||+++|+|.+..
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~----~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~-- 768 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS----SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG-- 768 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC----CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC--
Confidence 345677899999999999653 3 247777665432 2445688999999999999999999999999866
Q ss_pred eEEEEEeccCCCChhhhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE-----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
..+|++|||++|||..+|+..+ ...++..+.+.++.|||+|+.||++++ +|||||.++|+||++...+||+||
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecccCcEEEccc
Confidence 4599999999999999997542 346889999999999999999999988 999999999999999999999999
Q ss_pred cCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 630 SFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+|+..... ...|||||.+..+.++.|+|||||||+|||++| |..||... +-.+....++.+. .
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~--~n~~v~~~~~~gg-R- 922 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR--SNFEVLLDVLEGG-R- 922 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc--chHHHHHHHHhCC-c-
Confidence 999843221 247899999999999999999999999999999 99999532 2233333344442 1
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.+.+..+++.++++|..||+.+|++||++..|++++..+....
T Consensus 923 --------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 923 --------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 1235678899999999999999999999999999998876543
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=340.39 Aligned_cols=244 Identities=20% Similarity=0.340 Sum_probs=196.7
Q ss_pred ccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc--CCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE--DEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~--~~~~~~~LV~Ey 562 (772)
.+++|++|.||+|++ +|+.||||.+...... .....+.|.+|+++|++++|||||+++|++.+ .+....++||||
T Consensus 27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKG--HKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred EEeeCCceEEEEEEE-CCEEEEEEeccccccc--cHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 457889999999998 5889999988653221 12334678899999999999999999999876 333357899999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------ 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------ 635 (772)
+++|+|.+++.. ...++|.....++.+++.||+|||+. + ++||||||+|||+++++.+||+|||+++..
T Consensus 104 ~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 104 CTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred CCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCCCcEEEcccchHhhhcccccc
Confidence 999999999863 35689999999999999999999974 6 889999999999999999999999997642
Q ss_pred CCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 ~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||... +..+............ ..+..++
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~--~~~~~~~~i~~~~~~~---------~~~~~~~ 248 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL--TTKEIYDLIINKNNSL---------KLPLDCP 248 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcCCCC---------CCCCcCc
Confidence 234567899999865 68999999999999999999999999633 3334433333322211 1122356
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+++.+++.+||+.||++|||++|+++.|+.+..
T Consensus 249 ~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 249 LEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 678999999999999999999999999988754
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=357.38 Aligned_cols=251 Identities=27% Similarity=0.409 Sum_probs=205.0
Q ss_pred cccccCccceEEEEEEEEcCC----cE-EEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 482 IIGSFSDGTVGTVYKGTLSSG----VE-IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~----~~-vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+.+++|+|+||.||+|++..+ .. ||||..+... ........+|.+|+++|++++|||||++||++....|.
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl-- 236 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL-- 236 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccc--cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc--
Confidence 457899999999999997543 22 7888766422 22355678899999999999999999999999988864
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++|||+|+||+|.++|+.. ...++..+++.++.++|.||+|||+.+ +|||||.++|+|++.++.+||+|||+++...
T Consensus 237 ~ivmEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEEEEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 9999999999999999643 336999999999999999999999998 9999999999999999999999999987543
Q ss_pred C---------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 A---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 ~---------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
. -...|.|||.+....|+.++|||||||++||+++ |..||.+ ....+....+.....+.
T Consensus 314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g--~~~~~v~~kI~~~~~r~--------- 382 (474)
T KOG0194|consen 314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPG--MKNYEVKAKIVKNGYRM--------- 382 (474)
T ss_pred ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCC--CCHHHHHHHHHhcCccC---------
Confidence 1 2347899999999999999999999999999999 8889953 33334444443322211
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..+...+.++..++.+||..+|++||+|.++.+.|+.+......
T Consensus 383 ~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 383 PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 12234456788899999999999999999999999998776543
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-40 Score=348.98 Aligned_cols=230 Identities=26% Similarity=0.464 Sum_probs=191.2
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
+=+|.|+.|.||+|+++ ++.||||+++.. =..+|+-|++|+||||+.+.|+|.... ..|||||||
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el------------kETdIKHLRkLkH~NII~FkGVCtqsP--cyCIiMEfC 194 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL------------KETDIKHLRKLKHPNIITFKGVCTQSP--CYCIIMEFC 194 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh------------hhhhHHHHHhccCcceeeEeeeecCCc--eeEEeeecc
Confidence 45678889999999997 578999976422 125688999999999999999999876 569999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC--------C
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN--------T 635 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~--------~ 635 (772)
+.|-|++.|+ ..+.+.......+..+||.||.|||.++ |||||||+-||||..+..+||+|||.++. .
T Consensus 195 a~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 195 AQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred ccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh
Confidence 9999999995 4567888888999999999999999988 99999999999999999999999997652 3
Q ss_pred CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc-ccccHHHHH
Q 004124 636 TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL-KSFQENVLE 714 (772)
Q Consensus 636 ~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~ 714 (772)
..++..|||||++.....++|+||||||||||||+||..||..-+....-| + +=...+ ...+..+++
T Consensus 271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw------G------VGsNsL~LpvPstcP~ 338 (904)
T KOG4721|consen 271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW------G------VGSNSLHLPVPSTCPD 338 (904)
T ss_pred hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE------e------ccCCcccccCcccCch
Confidence 457788999999999999999999999999999999999995332211111 1 001111 134567888
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 715 ELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.+.-|++.||+..|..||+|++++..|+-.
T Consensus 339 GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 339 GFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 899999999999999999999999988643
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=346.90 Aligned_cols=248 Identities=23% Similarity=0.365 Sum_probs=196.1
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||.||+|.. ..+..||||++..... ....+.+.+|++++.++ +|||||+++|+|...+.
T Consensus 10 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 10 RLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT----ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred eeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc----hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 5678899999999999974 2346799998764321 22346789999999999 89999999999876543
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++||||+++|+|.+++....
T Consensus 86 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 86 -PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred -ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 4689999999999999986421
Q ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-----------CCccc
Q 004124 577 ---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGS 642 (772)
Q Consensus 577 ---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-----------~~~~~ 642 (772)
...+++...+.++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.... ++..|
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 134788889999999999999999988 99999999999999999999999999864321 12468
Q ss_pred cchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHH
Q 004124 643 AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIK 721 (772)
Q Consensus 643 ~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~ 721 (772)
+|||.+.+..++.++|||||||++|||+| |+.||...... .........+. .. ..+...+.++.+++.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~-~~---------~~~~~~~~~l~~li~ 311 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFCQRLKDGT-RM---------RAPENATPEIYRIML 311 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHhcCC-CC---------CCCCCCCHHHHHHHH
Confidence 99999988999999999999999999997 99999643322 12222222211 10 112234567889999
Q ss_pred HcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 722 NCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 722 ~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+||+.||++||++.|+++.|+++..
T Consensus 312 ~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 312 ACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=343.69 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=204.9
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
...+.+|+|+|++||+|+ ..+++++|||++.++.... +...+....|-++|.+| .||.||+|+-.|.+.. ..|+
T Consensus 76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iik--e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--sLYF 151 (604)
T KOG0592|consen 76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIK--EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--SLYF 151 (604)
T ss_pred chhheeccccceeEEEeeecCCCceeeHhhhhHHHHHh--hcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--ceEE
Confidence 344567899999999998 5578999999886554321 22334577888899999 8999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|+||+++|+|.++|+ ..+.++......++.+|..||+|||++| ||||||||+|||||+||++||+|||-|+..
T Consensus 152 vLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 999999999999996 4577999999999999999999999999 999999999999999999999999976532
Q ss_pred -------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 636 -------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 636 -------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
..|+..|.+||++.....+..+|+|+||||||+|+.|+.||...+.. ...++++.-+.
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney--liFqkI~~l~y- 304 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY--LIFQKIQALDY- 304 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH--HHHHHHHHhcc-
Confidence 12345688999999999999999999999999999999999654432 22333333222
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhh
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEIL 767 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~ 767 (772)
++++..++.+.+|+.+.|..||.+|++..+|-+ +|.+...+|+.+..+
T Consensus 305 ----------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~-------------HpFF~~Vdw~nlw~~ 352 (604)
T KOG0592|consen 305 ----------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA-------------HPFFEGVDWENLWQQ 352 (604)
T ss_pred ----------cCCCCCCHHHHHHHHHHHccCccccccHHHHhh-------------CcccccCChhhhhhc
Confidence 244555678899999999999999999977754 566777777776544
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=321.67 Aligned_cols=250 Identities=19% Similarity=0.315 Sum_probs=193.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+|++|+|+||.|||++.+ +|+.||||++...... +...+-.++||++|++++|+|+|.++.+|.... ..+|
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd---~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr--klhL 78 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD---PVVKKIALREIRMLKQLKHENLVNLIEVFRRKR--KLHL 78 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCcc---HHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--eeEE
Confidence 367899999999999999965 6899999998754422 445667899999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+|||+.- +.+.|. .....++.....++..|+++|+.|+|+++ +|||||||+|||+..++.+||||||+|+....
T Consensus 79 VFE~~dhT-vL~eLe-~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 79 VFEYCDHT-VLHELE-RYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred EeeecchH-HHHHHH-hccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99999874 444443 23456888899999999999999999998 99999999999999999999999999987653
Q ss_pred --------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHH--HH-----------HhhcCC
Q 004124 638 --------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA--SE-----------YLKGEQ 695 (772)
Q Consensus 638 --------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~--~~-----------~~~~~~ 695 (772)
.+..|.|||.+-+ ..|....||||.||++.||+||..-|.+.. ++.+.. .. ++...+
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-DiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-DIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-hHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 2335689999866 789999999999999999999998776433 222221 11 111111
Q ss_pred CCccccCCccc------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 PLKDIVDPTLK------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~~~d~~l~------~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
-+..+.=|... .-.+..+.-++++++.|++.||.+|++.+|++.
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111111 112344557899999999999999999999874
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=341.47 Aligned_cols=252 Identities=20% Similarity=0.304 Sum_probs=200.8
Q ss_pred cccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+.+++++|.|+||.||+|+ ..++..||||+++.+-. .|.+ -.=.+|++.|+++. |||||++.+++.+.+. ..+
T Consensus 12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee---~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~ 86 (538)
T KOG0661|consen 12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEE---CMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILY 86 (538)
T ss_pred HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHH---HHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEe
Confidence 5789999999999999999 56788999999876543 2322 22368999999998 9999999999988765 689
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
+|||||+ .+|+++++.+ .+.++...+..|+.||.+||+|+|.+| +.|||+||+|||+.....+||+|||+||....
T Consensus 87 fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 87 FVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccceeEeccccccccccc
Confidence 9999996 4999999765 788999999999999999999999999 99999999999999999999999999986544
Q ss_pred --------CCccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc----------
Q 004124 638 --------AKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK---------- 698 (772)
Q Consensus 638 --------~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~---------- 698 (772)
.+..|.|||++ +.+.|+.+.|+||+|||++|+.+-+.-|.+.+.-..-|..-.+-|.....
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 34457899986 67889999999999999999999998887544322222211222211111
Q ss_pred -------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 699 -------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 699 -------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+......++.+..++|.+|+++||.+|||+.|.++.
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111222334567889999999999999999999999875
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=335.71 Aligned_cols=244 Identities=22% Similarity=0.321 Sum_probs=194.3
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
..+.+|+|+||+||++... +|...|||.+...... ..+.+.+|+++|.+++|||||+++|.....+....++.|
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~-----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP-----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccch-----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3466788999999999965 4889999988654211 145689999999999999999999975444322368999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~~~~--- 636 (772)
||+++|+|.+++..... .++......+..||++||+|||+++ ||||||||+|||++. ++.+||+|||+++...
T Consensus 96 Ey~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999999999975444 7999999999999999999999988 999999999999999 7999999999876333
Q ss_pred ---------CCCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 ---------AAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|||||++..+. ...++||||+||++.||+||+.||... ....++........ ..+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~---------~~P 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGRED---------SLP 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccC---------CCC
Confidence 3456799999998533 335999999999999999999999643 22233332222221 112
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
.++...+.+..+++.+|++.||++||||.++++..-.
T Consensus 243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 3445577889999999999999999999999986543
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-39 Score=343.62 Aligned_cols=241 Identities=22% Similarity=0.387 Sum_probs=202.1
Q ss_pred cccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+-.++|-|.||.||.|.|+. .-.||||.++.... ..++|+.|+.+|+.++|||+|+++|+|....++ |||+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM------eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF--YIiT 342 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF--YIIT 342 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcch------hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe--EEEE
Confidence 34678889999999999874 56788988764432 357899999999999999999999999987754 9999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCC-
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK- 639 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~~- 639 (772)
|||.+|+|.+||+......+.--..+.+|.||+.||+||...+ +|||||.++|+|+.++..+||+|||+++.+...+
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTY 420 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTY 420 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccccceEEeeccchhhhhcCCce
Confidence 9999999999998777777888888999999999999999887 9999999999999999999999999998664322
Q ss_pred ---------ccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 640 ---------TGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 640 ---------~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..|.|||.+....++.|+|||+|||+|||+.| |-.||.+- ++.+ +...+.... ..+-+
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi--dlSq-VY~LLEkgy---------RM~~P 488 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQ-VYGLLEKGY---------RMDGP 488 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc--cHHH-HHHHHhccc---------cccCC
Confidence 25789999999999999999999999999999 88999643 2222 222222211 12345
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+.|++.+++||+.||++.|.+||+++|+-+.++.+
T Consensus 489 eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 489 EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 67889999999999999999999999999998765
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=335.29 Aligned_cols=250 Identities=21% Similarity=0.290 Sum_probs=193.5
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.+++||+|+||.||||+ ..+|+.||+|++......+ ....-..+||.+|++|+|||||++.+...+......|||
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~---~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE---GFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCC---cchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 567889999999999999 6789999999998765433 223456799999999999999999999988744468999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCC
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 639 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~~ 639 (772)
+|||++ ||.-++. ...-.++..++..++.|++.||+|+|+++ |+|||||.+|||||.+|.+||+|||+|+......
T Consensus 197 FeYMdh-DL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred Eecccc-hhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 999987 8888774 23457999999999999999999999999 9999999999999999999999999998543322
Q ss_pred ----------ccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCC----------C
Q 004124 640 ----------TGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQ----------P 696 (772)
Q Consensus 640 ----------~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~----------~ 696 (772)
..|.+||++. ...|+.+.|+||.||||.||++|+..|.+.. ++ +.+..+++ |.. +
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t-Ev-eQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT-EV-EQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc-HH-HHHHHHHHHhCCCChhccccccCC
Confidence 2478999875 4579999999999999999999998886432 11 11222211 110 0
Q ss_pred CccccCCc------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 LKDIVDPT------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~~~~d~~------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.+. +.+.....+...++|+..+|..||.+|.|+.++++
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 00111111 11112233457788999999999999999999876
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=332.75 Aligned_cols=240 Identities=32% Similarity=0.521 Sum_probs=190.0
Q ss_pred cccccCccceEEEEEEEEc-----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+.+.+|.|.||.||+|.+. .+..|+||.++... .....++|.+|++.+++++||||++++|+|...+ ..
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~ 76 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS----SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PL 76 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS----SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc----ccccceeeeecccccccccccccccccccccccc--cc
Confidence 5678899999999999987 35678888884322 2334678999999999999999999999999665 47
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.++|+......+++..+..|+.||++||+|||+.+ |+||||+++||++++++.+||+|||+++...
T Consensus 77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence 99999999999999998665677999999999999999999999988 9999999999999999999999999876541
Q ss_pred -----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.....|+|||.+....++.++||||||+++||++| |+.||... +..++......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~~~~~~--------- 223 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKLKQGQR--------- 223 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHHHTTEE---------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccc---------
Confidence 12346789999988889999999999999999999 77888432 44444444432211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...+..++..+.+++.+||+.+|++||+|.++++.|
T Consensus 224 -~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 -LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112233456788999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=333.66 Aligned_cols=242 Identities=19% Similarity=0.258 Sum_probs=193.8
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|.. .+++.+|+|.+....... ......+.+|++++.+++|+||+++++++.+.+ ..++|
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~--~~~lv 78 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKRILEKVNSRFVVSLAYAYETKD--ALCLV 78 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh--hhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--eEEEE
Confidence 4567789999999999985 578899999876543221 223356889999999999999999999998777 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 99999999998876444456899999999999999999999988 9999999999999999999999999976422
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||....... .......... ...++
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------~~~~~ 225 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED-----------QEEYS 225 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc-----------cccCC
Confidence 24567999999999999999999999999999999999997433211 1111111110 01122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...+.++.+|+.+||+.||++||+ ++|+++
T Consensus 226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 345567889999999999999997 677764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=323.34 Aligned_cols=250 Identities=20% Similarity=0.277 Sum_probs=200.7
Q ss_pred cccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++...+|.|.-++||+|+ .+.+..||||++...... .....+.+|+..|+.++|||||+++..|..+. ..|+
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~----~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--~LWv 101 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN----NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--ELWV 101 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh----hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc--eeEE
Confidence 3667788889999999999 457799999999764422 23578999999999999999999999988877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc-----
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----- 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~----- 633 (772)
||.||.+|++.++++..-...+++..+..|.+++++||.|||.+| -||||||+.|||||.+|.+||+|||...
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999999999998666667999999999999999999999998 9999999999999999999999998632
Q ss_pred --------CCCCCCccccchhhh--ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 634 --------NTTAAKTGSAAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 634 --------~~~~~~~~~~aPE~~--~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
....++..|||||++ ....|+.|+|||||||+..||++|..||... ...+.....+.+..+..... .
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~--pPmkvLl~tLqn~pp~~~t~-~ 256 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY--PPMKVLLLTLQNDPPTLLTS-G 256 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC--ChHHHHHHHhcCCCCCcccc-c
Confidence 233567789999995 3457999999999999999999999999532 22333333444433322210 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.-.+........+.+++..|+++||++|||+.++++.
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011123345678899999999999999999999753
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=331.37 Aligned_cols=249 Identities=23% Similarity=0.365 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEcC-----------------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----------------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----------------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
.+.+.+|+|+||.||+|.+++ +..||+|.+.... ......+|.+|++++.+++||||++
T Consensus 8 ~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 8 LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA----NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 566788999999999998543 2368888775432 1334567999999999999999999
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhhhhhhc-----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCe
Q 004124 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE-----------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPI 606 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~-----------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~I 606 (772)
++|++.+.+ ..++||||+++|+|.+++.... ...++|....+++.|++.||+|||+.+ |
T Consensus 84 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i 159 (304)
T cd05096 84 LLGVCVDED--PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--F 159 (304)
T ss_pred EEEEEecCC--ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--c
Confidence 999998876 5799999999999999885321 124788899999999999999999988 9
Q ss_pred EeeCCCCCCeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc--CC
Q 004124 607 AHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT--GR 673 (772)
Q Consensus 607 vHrDLKp~NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt--G~ 673 (772)
+||||||+|||+++++.+||+|||+++.... ....|+|||.+....++.++|||||||++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999864321 1346899999988899999999999999999997 55
Q ss_pred CcccCCC-CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 674 ISYSIEN-GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 674 ~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
.||.... ................ ... ...+..++..+.+++.+||+.||++|||+.||.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGR--QVY----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccc--ccc----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 6664322 1111212111111100 000 01122345678999999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=336.56 Aligned_cols=243 Identities=22% Similarity=0.332 Sum_probs=201.0
Q ss_pred cccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCce
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~ 555 (772)
+.+.+...+|+|+||+||.|+. .++..||+|.+..+..........+.+.+|+.++++++ ||||++++.++.... .
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--~ 94 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--K 94 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC--e
Confidence 3456778899999999999985 46799999966543221111133456778999999998 999999999999887 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNN 634 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~ 634 (772)
.++||||+.+|+|++++.. ...+.+.....++.|++.|++|+|+++ |+||||||+|||+|.+ +++||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 8999999999999999964 567888999999999999999999998 9999999999999999 9999999999875
Q ss_pred C---------CCCCccccchhhhccCC-CC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 635 T---------TAAKTGSAAMELLETSA-VD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 635 ~---------~~~~~~~~aPE~~~~~~-~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ..|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+. .+.......+..+.-.+...++
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d--~~~~~l~~ki~~~~~~~p~~~~- 247 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD--SNVPNLYRKIRKGEFKIPSYLL- 247 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--ccHHHHHHHHhcCCccCCCCcC-
Confidence 4 23567899999998877 86 889999999999999999999964 4444444445554433333321
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl 738 (772)
+.++..++.+|+..||.+|+++.||+
T Consensus 248 ---------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 248 ---------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 57889999999999999999999998
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=337.26 Aligned_cols=238 Identities=23% Similarity=0.343 Sum_probs=198.0
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
....++|+|+-|.||.|+ ..++..||||++....... ++-+.+|+.+|+..+|+|||++++.|...+ +.++|
T Consensus 276 ~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-----keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--eLWVV 348 (550)
T KOG0578|consen 276 TDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-----KELLLNEILVMRDLHHPNIVNFLDSYLVGD--ELWVV 348 (550)
T ss_pred cchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-----hhhhHHHHHHHHhccchHHHHHHHHhcccc--eeEEE
Confidence 334578899999999998 5678899999998765332 356889999999999999999999777666 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
||||++|+|.+.+. ...+++.++..|++++++||+|||..+ |+|||||.+|||++.++++||+|||++..
T Consensus 349 MEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred EeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99999999999884 345899999999999999999999998 99999999999999999999999998743
Q ss_pred ----CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 635 ----TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 635 ----~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
...|+++|||||+.....|++|.||||+|++++||+-|+.||..++.....|. +..... +.+ ..++
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL--Ia~ng~-------P~l-k~~~ 493 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--IATNGT-------PKL-KNPE 493 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH--HhhcCC-------CCc-CCcc
Confidence 33467899999999999999999999999999999999999975443322222 111111 111 1345
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+.++.+++.+||+.|+++|+++.|+++.
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 677899999999999999999999999874
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=303.89 Aligned_cols=249 Identities=19% Similarity=0.264 Sum_probs=196.6
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..++.+|+|+||.||+|+ .++|+.||+|+++.....+ .......+||+.|+.++|+||+.+++++-..+ ...||
T Consensus 5 ~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd---Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lV 79 (318)
T KOG0659|consen 5 EKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD---GINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLV 79 (318)
T ss_pred hhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc---CccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEE
Confidence 456789999999999999 5689999999998875443 23456789999999999999999999998877 56899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+|||+. +|...++. ....++..+...++.++.+|++|||+.. |+||||||.|+|++++|.+||+|||+++....
T Consensus 80 fEfm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 80 FEFMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred EEeccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 999975 99988863 4567899999999999999999999998 99999999999999999999999999986542
Q ss_pred -------CCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc-----
Q 004124 638 -------AKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT----- 704 (772)
Q Consensus 638 -------~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----- 704 (772)
.+.-|.|||.+. ...|+...||||.|||+.||+-|.+-| .++.++++...-+..-..|..+ ..|.
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f-pG~sDidQL~~If~~LGTP~~~-~WP~~~~lp 233 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF-PGDSDIDQLSKIFRALGTPTPD-QWPEMTSLP 233 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC-CCCchHHHHHHHHHHcCCCCcc-cCccccccc
Confidence 234578999874 567999999999999999999987544 4444554443222211111110 0111
Q ss_pred ------------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 705 ------------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 ------------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.......+..++.+++..+|..+|.+|.++.|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111223455678999999999999999999999864
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-37 Score=326.83 Aligned_cols=239 Identities=20% Similarity=0.259 Sum_probs=194.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 79 (291)
T cd05612 4 ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR--LKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR--FLYML 79 (291)
T ss_pred eeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh--hHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC--eEEEE
Confidence 56788899999999999965 67889999886432211 223456889999999999999999999988776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 80 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 999999999999853 356889999999999999999999988 9999999999999999999999999976432
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+... ++....
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 222 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD--NPFGIYEKILAGKLE-----------FPRHLD 222 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCcC-----------CCccCC
Confidence 2456789999999889999999999999999999999999643 333334444333221 122234
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPS-----MRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs-----~~evl~~ 740 (772)
..+.+++.+||+.||.+||+ +.|+++.
T Consensus 223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 67889999999999999995 7777653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-37 Score=331.65 Aligned_cols=234 Identities=21% Similarity=0.265 Sum_probs=191.1
Q ss_pred ccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||.||+++. .+++.+|+|++...... .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~~ 77 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVII--AKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--RLCFVMEYA 77 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--EEEEEEeCC
Confidence 468899999999986 46889999988643221 1223456889999999999999999999998877 679999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--------
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-------- 635 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-------- 635 (772)
++|+|.+++.. ...+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 153 (323)
T cd05571 78 NGGELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence 99999998853 456899999999999999999999998 999999999999999999999999987642
Q ss_pred -CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 636 -TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 636 -~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..........+... ++.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~-----------~p~~~~~ 220 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIR-----------FPRTLSP 220 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC--CHHHHHHHHHcCCCC-----------CCCCCCH
Confidence 12456799999999999999999999999999999999999643 223333333222111 2233456
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 715 ELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 788999999999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=317.49 Aligned_cols=238 Identities=21% Similarity=0.373 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+++++++..+++|.+..... ..++|.+|++++++++||||+++++++...+ ..++||
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv~ 78 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--PLYIVT 78 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCc------cHHHHHHHHHHHHHCCCCCceeEEEEEccCC--CEEEEE
Confidence 56788999999999999998888899997653321 1357889999999999999999999998776 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++... ..++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 79 EFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 9999999999986432 35899999999999999999999988 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
....|+|||...+..++.++||||||+++|||++ |+.||... +..+.......+.... .+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~--~~~~~~~~i~~~~~~~----~~------ 223 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK--SNYEVVEMISRGFRLY----RP------ 223 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCCCC----CC------
Confidence 1235899999988889999999999999999999 89998533 2333333333332111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...+.++.+++.+||+.+|++||++.|+++.|
T Consensus 224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 12345789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=320.43 Aligned_cols=243 Identities=22% Similarity=0.324 Sum_probs=195.1
Q ss_pred ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++...+|+|+||.||+|++. .+..+|+|.++... .......|.+|+.++.+++||||++++|++..++ ..
T Consensus 8 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~ 81 (266)
T cd05064 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC----SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--TM 81 (266)
T ss_pred EEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC--Cc
Confidence 56677889999999999864 35678888876432 1233467999999999999999999999998776 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...++|..++.++.|++.||+|||+.+ ++||||||+|||++.++.+|++|||......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999998643 346899999999999999999999988 9999999999999999999999999764321
Q ss_pred ----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 ----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.+...|+|||.+.+..++.++|||||||++||+++ |+.||... ...+.......+ ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~--~~~~~~~~~~~~-~~--------- 226 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM--SGQDVIKAVEDG-FR--------- 226 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC--CHHHHHHHHHCC-CC---------
Confidence 12246899999998999999999999999999875 99999533 222323322211 11
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
...+..++..+.+++.+||+.+|++||++.||.+.|.++
T Consensus 227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011234556788999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=348.89 Aligned_cols=246 Identities=20% Similarity=0.355 Sum_probs=204.4
Q ss_pred ccccccCccceEEEEEEEEcCC-cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeE-EEEc---CC-C
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG-VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIG-YCEE---DE-P 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~-~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g-~~~~---~~-~ 553 (772)
+|.+.|.+|||+.||.|+...+ ..+|+|++.... +...+...+||++|++|+ |+|||.+++ .... .+ .
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-----e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-----EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC-----HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 5677889999999999997766 999999987653 334567899999999996 999999999 3322 22 4
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
++.+|.||||++|.|-+++..+....|++.++++|+.|+++|+++||.+.|||||||||-+||||+.++..||||||-+.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 67899999999999999998665566999999999999999999999999999999999999999999999999999765
Q ss_pred CCC------------------CCCccccchhhh---ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004124 634 NTT------------------AAKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 634 ~~~------------------~~~~~~~aPE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
... ..+..|++||.+ .+...++|+|||++||+||-|+....||+..+.
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----------- 263 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----------- 263 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----------
Confidence 321 134578999986 677899999999999999999999999964321
Q ss_pred cCCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 693 GEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 693 ~~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..|++.... +..+.++..+.+||..||+.+|++||++-+|+..+.++...
T Consensus 264 -----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 -----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 122222221 11257889999999999999999999999999999887664
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=307.27 Aligned_cols=260 Identities=20% Similarity=0.296 Sum_probs=212.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.+..+|.|+||+|..++.+ +|..+|.|++.+..... -...+...+|..+|+.+.||+++++++.+.+.+ ..+||
T Consensus 47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVk--lKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--~lymv 122 (355)
T KOG0616|consen 47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVK--LKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--NLYMV 122 (355)
T ss_pred hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHH--HHHHHHHhhHHHHHhhccCceeEEEEEeeccCC--eEEEE
Confidence 46788999999999999965 67889999887654333 334466789999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|.|..+++ ..+.++......+|.+|+.||+|||+++ |++|||||+|||||.+|.+||+|||+|+..
T Consensus 123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 99999999999995 4567999999999999999999999999 999999999999999999999999999754
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
-.|++.|.|||.+....|..++|.|||||++|||+.|..||...+. .+...+++.+.-. ++....
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~KI~~~~v~-----------fP~~fs 265 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEKILEGKVK-----------FPSYFS 265 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHHHHhCccc-----------CCcccC
Confidence 3567889999999999999999999999999999999999975543 4445555555433 344455
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh-cCCCCCCCCCCCchHHHHhhhhcc
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA-MEPDGATPKLSPLWWAELEILSSE 770 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~-~~~~~~~p~~~~~~~~~~~~~~~~ 770 (772)
.++.+|+...++.|-.+|- -.+.. ......+|.+....|.++...+.|
T Consensus 266 ~~~kdLl~~LL~vD~t~R~---------gnlknG~~dIk~H~wF~~v~W~~i~~r~ie 314 (355)
T KOG0616|consen 266 SDAKDLLKKLLQVDLTKRF---------GNLKNGVEDIKNHPWFKGVDWEAILQRKIE 314 (355)
T ss_pred HHHHHHHHHHHhhhhHhhh---------cCcCCCccccccCcccccccHHHHhhcccc
Confidence 6788899999999988882 22221 223345677778888887766554
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=335.62 Aligned_cols=243 Identities=20% Similarity=0.350 Sum_probs=202.0
Q ss_pred ccccCccceEEEEEEEEc---CCc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 483 IGSFSDGTVGTVYKGTLS---SGV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~---~~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
-..+|+|.||.||+|.+. .|. .||||..+... .....+.|.+|..+|++++|||||+++|+|.+.. .+
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~----t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P---~W 466 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC----TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP---MW 466 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCC----ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---ee
Confidence 356789999999999864 333 45666554322 2334678999999999999999999999998764 68
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
||||.++.|.|.+||+. +...++......++.||+.||+|||+.. .|||||..+|||+...-.+|++|||+++....
T Consensus 467 ivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999964 4567888889999999999999999988 99999999999999999999999999886543
Q ss_pred C----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 638 A----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 638 ~----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
. .-.|||||.+...+++.+||||-|||++||++. |..||.+-.. ..-+..+-.....
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------------sDVI~~iEnGeRl 611 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------------SDVIGHIENGERL 611 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc------------cceEEEecCCCCC
Confidence 2 225899999999999999999999999999988 9999964322 1222333344455
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+.++.|+..++.||.+||++||.+||.+.|+...|.++...
T Consensus 612 P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 612 PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999999999887663
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=330.31 Aligned_cols=239 Identities=16% Similarity=0.256 Sum_probs=194.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+|+|.+....... ....+.+.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 96 (329)
T PTZ00263 21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK--MKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN--RVYFL 96 (329)
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC--EEEEE
Confidence 67788999999999999975 57889999886432211 223467899999999999999999999998877 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 999999999999853 346788888999999999999999988 9999999999999999999999999986432
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+...+ +....
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 239 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD--TPFRIYEKILAGRLKF-----------PNWFD 239 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC--CHHHHHHHHhcCCcCC-----------CCCCC
Confidence 2456789999999999999999999999999999999999533 2333333333332111 11234
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPS-----MRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs-----~~evl~~ 740 (772)
.++.+++.+||+.||++||+ ++|++..
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 56789999999999999996 6777643
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=337.63 Aligned_cols=239 Identities=22% Similarity=0.340 Sum_probs=206.4
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|.|+-|.|-.|+ ..+|+.+|||++.+.... .......+.+||-+|+-+.||||+++|+++++.. +.|+|
T Consensus 15 kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~--s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~--~lylv 90 (786)
T KOG0588|consen 15 KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL--SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ--HLYLV 90 (786)
T ss_pred eccccccCCCCceehhhhcccccceeEEEeecccccc--ccccccchhhhhHHHHHhcCCCeeeeeeeeccCc--eEEEE
Confidence 455678899999999998 568999999998766322 2333456889999999999999999999999887 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
.||+++|.|++++. ..+.+...+..+++.||..|+.|+|..+ |+||||||+|+|||.+.++||+|||+|..
T Consensus 91 lEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 91 LEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 99999999999995 4567889999999999999999999998 99999999999999999999999999863
Q ss_pred ---CCCCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 635 ---TTAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 635 ---~~~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
..+|.++|++||++.+..|. .++||||.|||||.|+||+.||+ ++++.....++..|.-. ++.
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd--DdNir~LLlKV~~G~f~-----------MPs 233 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD--DDNIRVLLLKVQRGVFE-----------MPS 233 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC--CccHHHHHHHHHcCccc-----------CCC
Confidence 34577899999999999986 79999999999999999999996 55677776666666432 335
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.++.+|+.+|+..||++|.|++||.+.
T Consensus 234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 234 NISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 566789999999999999999999999976
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=335.64 Aligned_cols=246 Identities=22% Similarity=0.351 Sum_probs=193.9
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||.||+|+.. ++..||+|++..... ....+.+.+|+++++.+ +|+|||+++|+|...+
T Consensus 41 ~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~- 115 (374)
T cd05106 41 QFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH----TDEREALMSELKILSHLGQHKNIVNLLGACTHGG- 115 (374)
T ss_pred eehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC----HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC-
Confidence 56788899999999999742 235799998864332 22345788999999999 8999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++||||+++|+|.++++...
T Consensus 116 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 116 -PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred -CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 5799999999999999885321
Q ss_pred -----------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--------
Q 004124 577 -----------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-------- 637 (772)
Q Consensus 577 -----------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-------- 637 (772)
...+++....+|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 124788889999999999999999988 99999999999999999999999999764321
Q ss_pred ---CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|+|||.+....++.++|||||||++|||++ |+.||....... .+ ......... +. .+...+
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~-~~~~~~~~~------~~---~~~~~~ 341 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KF-YKMVKRGYQ------MS---RPDFAP 341 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HH-HHHHHcccC------cc---CCCCCC
Confidence 1235999999988899999999999999999997 999996432211 11 111111110 00 111234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.++.+++.+||+.||++||++.+|++.|+++.
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 67889999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=328.60 Aligned_cols=233 Identities=19% Similarity=0.254 Sum_probs=189.8
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|+|+||.||+|+.. +++.+|+|.+...... .......+.+|++++.+++|||||++++++...+ ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV--SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--KLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--eEEEEEcCCC
Confidence 578999999999965 5788999988643221 1233467889999999999999999999998776 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--------- 635 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--------- 635 (772)
+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 77 ~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 152 (312)
T cd05585 77 GGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNT 152 (312)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccc
Confidence 9999999853 346899999999999999999999988 999999999999999999999999987642
Q ss_pred CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHH
Q 004124 636 TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEE 715 (772)
Q Consensus 636 ~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 715 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+... ++.....+
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~--~~~~~~~~~~~~~~~-----------~~~~~~~~ 219 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE--NVNEMYRKILQEPLR-----------FPDGFDRD 219 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC--CHHHHHHHHHcCCCC-----------CCCcCCHH
Confidence 12456799999999999999999999999999999999999643 334444444333211 22334567
Q ss_pred HHHHHHHcccCCCCCCCC---HHHHHH
Q 004124 716 LLVVIKNCVHPDPKQRPS---MRGIAA 739 (772)
Q Consensus 716 l~~Li~~Cl~~dP~~RPs---~~evl~ 739 (772)
+.+++.+||+.||++||+ +.|++.
T Consensus 220 ~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 889999999999999975 566554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=334.91 Aligned_cols=244 Identities=23% Similarity=0.360 Sum_probs=192.3
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|++ .++..||||+++.... ....+.+.+|++++..+ +|||||+++|+|...+
T Consensus 38 ~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~- 112 (375)
T cd05104 38 SFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHINIVNLLGACTVGG- 112 (375)
T ss_pred ehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC----cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence 5567889999999999974 2356799998753321 22346789999999999 8999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++||||+++|+|.++++...
T Consensus 113 -~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 113 -PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred -cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 5799999999999999986321
Q ss_pred ----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 577 ----------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 577 ----------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
...++|..+.+++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 124788999999999999999999988 99999999999999999999999998764321
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
....|+|||.+.+..++.++|||||||++|||+| |..||...... ..+......+.... .
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~----------~ 338 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRML----------S 338 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccCC----------C
Confidence 1235899999999999999999999999999998 88888643221 12222211111100 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
+...+.++.+++.+||+.||++||+|.||++.|++
T Consensus 339 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 339 PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 11224578899999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=316.23 Aligned_cols=242 Identities=21% Similarity=0.372 Sum_probs=197.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||.||+|... .+..+++|...... ...+++.+|++++.+++||||+++++++...+ ..++|
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 80 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCCc------hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--CcEEE
Confidence 45577889999999999965 57788998775321 12357899999999999999999999998776 56999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~- 638 (772)
|||+++|+|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999986555567899999999999999999999988 999999999999999999999999987643321
Q ss_pred ---------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 639 ---------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 639 ---------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
...|+|||...+..++.++|||||||++|||+| |..||... +..+.......+... ..
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~----------~~ 226 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKGYRM----------ER 226 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCCC----------CC
Confidence 235899999988999999999999999999998 89998533 333333333221110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
++..+.++.+++.+||+.+|++||++.|+++.|+.+
T Consensus 227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 233457789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=329.89 Aligned_cols=237 Identities=22% Similarity=0.327 Sum_probs=201.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||+||||+.+ +.+.||+|.+.+..+. +...+.+.+|++++++++|||||.++++|+... +.++|
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~---~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~--~~~vV 79 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN---EKELKNLRQEVRILRSLKHPNIVEMLESFETSA--HLWVV 79 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCCc---hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--eEEEE
Confidence 56678899999999999865 5677888887654432 334567999999999999999999999999887 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
.||+.+ +|+.+|.. .+.+++.....|+.++..||.|||+.+ |+|||+||.|||++..+.+|++|||+++.+.
T Consensus 80 te~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred ehhhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 999976 99999953 456899999999999999999999988 9999999999999999999999999998554
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.|++.|||||...+..|+..+|.||+|||+||+++|++||.. .++.+.++.+.++... .+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a--~si~~Lv~~I~~d~v~-----------~p~ 221 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA--RSITQLVKSILKDPVK-----------PPS 221 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--HHHHHHHHHHhcCCCC-----------Ccc
Confidence 466789999999999999999999999999999999999953 3455566666554322 223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+..+..++...+.+||.+|.+-.+++..
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 566788999999999999999999998754
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=323.13 Aligned_cols=244 Identities=24% Similarity=0.435 Sum_probs=196.4
Q ss_pred ccccccCccceEEEEEEEEcCC------cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~------~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||.||+|..... ..+++|.+.... ......+|.+|++++.+++||||+++++++...+
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 81 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA----EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ-- 81 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC----CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC--
Confidence 5678899999999999986432 468888775332 1234567999999999999999999999998766
Q ss_pred eEEEEEeccCCCChhhhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
..+++|||+++|+|.+++..... ..+++...+.++.|++.||+|||+.+ ++||||||+||++++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~ 159 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE 159 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence 56999999999999999864321 45888999999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004124 621 DYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++.+||+|||+++.... .+..|+|||.+....++.++|||||||++|||+| |..||.... ..+...
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--~~~~~~ 237 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--NQEVIE 237 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHH
Confidence 99999999998764311 1245899999988899999999999999999998 999986432 223332
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.+..+. ....+..++.++.+|+.+||+.||++||++.||++.|+++
T Consensus 238 ~i~~~~----------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 MIRSRQ----------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHcCC----------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 222221 1112345668899999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=314.26 Aligned_cols=242 Identities=21% Similarity=0.402 Sum_probs=198.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++++|+|+||.||+|...++..+++|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..++||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 80 (261)
T cd05072 9 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--PIYIIT 80 (261)
T ss_pred EEeeecCCcCCceEEEEEecCCceEEEEEccCCc------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEEEE
Confidence 6788999999999999998888889999865322 12467899999999999999999999988766 569999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 9999999999997655667899999999999999999999987 99999999999999999999999999864321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|+|||......++.++|||||||++|||+| |+.||.... ........... ... + ..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~-~~~-----~----~~ 226 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQRG-YRM-----P----RM 226 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHHcC-CCC-----C----CC
Confidence 1235899999988889999999999999999999 999995432 22222222211 111 1 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
...+.++.+++.+||..+|++||+++++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 22446788999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=324.06 Aligned_cols=245 Identities=19% Similarity=0.328 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEc-CCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++..+|+|+||+||+|++. ++. .||+|.+.... .....++|.+|+.+++.++||||++++|+|....
T Consensus 10 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~--- 82 (316)
T cd05108 10 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 82 (316)
T ss_pred eeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC---
Confidence 66788999999999999864 333 37888775322 1233567999999999999999999999998653
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+++|+|.++++.. ...+++...+.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCCCcEEEccccccccc
Confidence 57999999999999998643 346889999999999999999999988 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. .+..|+|||.+....++.++|||||||++|||+| |+.||... ...++.. .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~--~~~~~~~-~~~~~~~~~----- 231 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISS-ILEKGERLP----- 231 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHH-HHhCCCCCC-----
Confidence 21 1235899999998999999999999999999998 99998533 2222222 222111110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+..+..++.+++.+||+.+|++||++.+++..+..+...
T Consensus 232 ----~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 232 ----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 1122345688999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=326.95 Aligned_cols=235 Identities=20% Similarity=0.256 Sum_probs=191.3
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||.||+++.. +++.+|+|++...... .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~Ey~ 77 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVII--AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--RLCFVMEYV 77 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--EEEEEEeCC
Confidence 4678999999999864 6889999988643221 1233467889999999999999999999998877 679999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--------
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-------- 635 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-------- 635 (772)
++|+|..++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 153 (328)
T cd05593 78 NGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK 153 (328)
T ss_pred CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence 99999988753 356899999999999999999999988 999999999999999999999999987642
Q ss_pred -CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 636 -TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 636 -~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+........... ++.....
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~--~~~~~~~~~~~~~~~-----------~p~~~~~ 220 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEDIK-----------FPRTLSA 220 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC--CHHHHHHHhccCCcc-----------CCCCCCH
Confidence 12456799999999889999999999999999999999999533 233333332222111 2233456
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 715 ELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
++.+++.+||+.||++|| ++.|+++.
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 788999999999999997 88988753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=328.51 Aligned_cols=239 Identities=18% Similarity=0.255 Sum_probs=193.2
Q ss_pred ccccccCccceEEEEEEEEcC--CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+... +..+|+|++...... .....+.+.+|++++..++|||||++++++.+.+ ..++
T Consensus 33 ~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~l 108 (340)
T PTZ00426 33 NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--YLYL 108 (340)
T ss_pred EEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC--EEEE
Confidence 677889999999999998653 357999987643211 1223457889999999999999999999998876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999999853 346889999999999999999999988 9999999999999999999999999986432
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..........+... ++...
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~~~~~~~i~~~~~~-----------~p~~~ 251 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE--PLLIYQKILEGIIY-----------FPKFL 251 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC--HHHHHHHHhcCCCC-----------CCCCC
Confidence 24567999999988889999999999999999999999996432 22223333332211 12223
Q ss_pred HHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
..++.+++.+|++.||++|+ +++|+++.
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 45678899999999999995 88888753
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=326.32 Aligned_cols=234 Identities=20% Similarity=0.264 Sum_probs=189.9
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||.||+++.. ++..||+|.+...... .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEYA 77 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--EEEEEEeCC
Confidence 4688999999999964 6889999988653221 1223456788999999999999999999998876 679999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--------
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-------- 635 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-------- 635 (772)
++|+|..++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 153 (323)
T cd05595 78 NGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 153 (323)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence 99999988753 346899999999999999999999988 999999999999999999999999987532
Q ss_pred -CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 636 -TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 636 -~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +.............. ++....+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~--~~~~~~~~~~~~~~~-----------~p~~~~~ 220 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIR-----------FPRTLSP 220 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCC-----------CCCCCCH
Confidence 12456799999998889999999999999999999999999533 222222222222111 1223456
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 715 ELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 788999999999999998 8888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=324.76 Aligned_cols=239 Identities=22% Similarity=0.312 Sum_probs=192.3
Q ss_pred hhcccccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 476 CEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+|| +++..||+|+||.||.|+ ..+|..+|+|++++..... ....+..+.|-.+|...++|.||++|-.|++.+
T Consensus 140 ~~DF-e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~--~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~-- 214 (550)
T KOG0605|consen 140 LDDF-ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLK--KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE-- 214 (550)
T ss_pred cccc-hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHh--hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--
Confidence 3455 678899999999999998 4578999999998765433 344567889999999999999999999999887
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+.||||||.||||+..+|. ....|+......++.+++.|++-+|+.| +|||||||+|+|||..|++||+||||+..
T Consensus 215 ~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred eeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCCCCEeeccccccch
Confidence 7899999999999999995 4567888888899999999999999999 99999999999999999999999998631
Q ss_pred C--------------------------------------------------------CCCCccccchhhhccCCCCCCCc
Q 004124 635 T--------------------------------------------------------TAAKTGSAAMELLETSAVDLESN 658 (772)
Q Consensus 635 ~--------------------------------------------------------~~~~~~~~aPE~~~~~~~s~ksD 658 (772)
. ..|++-|+|||++.+..|+..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 0 11234588999999999999999
Q ss_pred hHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC
Q 004124 659 VYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733 (772)
Q Consensus 659 VwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 733 (772)
+||+|||+|||+.|-+||..++. .+..++++.-...+.. | .......+..+||.+|+. ||++|-.
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp--~~T~rkI~nwr~~l~f---P----~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETP--QETYRKIVNWRETLKF---P----EEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhhhccC---C----CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999999999975442 2323333322111110 0 012234789999999999 9999965
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=330.67 Aligned_cols=247 Identities=18% Similarity=0.246 Sum_probs=197.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ....+.+.+|++++..++||||+++++++...+ ..++|
T Consensus 4 ~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~~lv 79 (333)
T cd05600 4 QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK--LNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE--YLYLA 79 (333)
T ss_pred EEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh--hhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC--EEEEE
Confidence 57788999999999999975 57899999886543211 223467889999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~ 155 (333)
T cd05600 80 MEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA 155 (333)
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEEEeCcCCccccccc
Confidence 999999999999853 356889999999999999999999988 999999999999999999999999998643
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||.... ..+............. .+.........+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~---~~~~~~~~~~~s 230 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST--PNETWENLKYWKETLQ---RPVYDDPRFNLS 230 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC--HHHHHHHHHhcccccc---CCCCCccccccC
Confidence 235667999999998899999999999999999999999996432 2222222221111110 111111112346
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.+++.+||..+|++||++.|+++.
T Consensus 231 ~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 231 DEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 788899999999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=312.93 Aligned_cols=250 Identities=20% Similarity=0.328 Sum_probs=202.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+.. ++..+++|.+...... .......|.+|++++++++||||+++++++...+ ..++|
T Consensus 5 ~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 80 (267)
T cd08228 5 QIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM--DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN--ELNIV 80 (267)
T ss_pred eeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC--CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC--eEEEE
Confidence 56677899999999999964 6789999987643322 2334567899999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
+||+++|+|.+++... ....+++.....++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999888532 2345788899999999999999999988 9999999999999999999999999875422
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.+...|+|||.+.+..++.++||||||+++|||+||+.||.....+...+......... +.. .
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~--~ 229 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-------PPL--P 229 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC-------CCC--C
Confidence 23456899999988889999999999999999999999997555444444443322111 100 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
......++.+++.+||+.+|++||++.+|++.++.++
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 2345577899999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=321.23 Aligned_cols=253 Identities=24% Similarity=0.351 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEc-----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||.||+|..+ ++..+++|++.... ....+.|.+|++++++++||||+++++++...+...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 7 KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred eeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 56788999999999999753 57789999876432 233467899999999999999999999886544335
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++... ...++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 79999999999999998532 345899999999999999999999988 999999999999999999999999987743
Q ss_pred CCC------------CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc-----
Q 004124 636 TAA------------KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK----- 698 (772)
Q Consensus 636 ~~~------------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~----- 698 (772)
... ...|+|||...+..++.++|||||||++|||++|..++..... .+... ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~ 234 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRM-MGNDKQGQMIVYH 234 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhh-cccccccccchHH
Confidence 221 1247899999888899999999999999999998776532111 11110 00000000
Q ss_pred --cccC-CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 699 --DIVD-PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 699 --~~~d-~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
+.+. ......+...+.++.+++.+||+.+|++||||.||++.|+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0000 0001112334567999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=313.41 Aligned_cols=243 Identities=23% Similarity=0.401 Sum_probs=199.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|.|+||.||+|...++..+++|.+..... ....++.+|++++++++|+||+++++++...+ ..++||
T Consensus 9 ~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~ 81 (261)
T cd05148 9 TLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-----LKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--PVYIIT 81 (261)
T ss_pred HHhhhhccCCCccEEEeEecCCCcEEEEeccccch-----hhHHHHHHHHHHHhcCCCcchhheeeeEecCC--CeEEEE
Confidence 56778899999999999988889999998765432 12456889999999999999999999998877 569999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++......+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999999999997655667899999999999999999999988 99999999999999999999999998754321
Q ss_pred ------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 ------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 ------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
....|++||......++.++||||||+++|||++ |+.||.... ..+.......+... ..+.
T Consensus 160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~----------~~~~ 227 (261)
T cd05148 160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQITAGYRM----------PCPA 227 (261)
T ss_pred cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHHhCCcC----------CCCC
Confidence 1235889999988899999999999999999999 899985432 22233322222110 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.+++++.++|.+||+.||++|||++++.+.|+.+
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 3456788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=312.15 Aligned_cols=239 Identities=19% Similarity=0.353 Sum_probs=193.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|++.++..+|+|.+..... ...+|.+|+.++.+++||||+++++++...+ ..++||
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 78 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--PIYIVT 78 (256)
T ss_pred EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--CcEEEE
Confidence 56788999999999999988777899998764321 1356899999999999999999999998776 469999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 79 e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 79 EYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999998643 236899999999999999999999988 99999999999999999999999998763321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|++||...+..++.++|||||||++|||+| |+.||.... ..+.......+.... .+
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~----------~~ 223 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--NSETVEKVSQGLRLY----------RP 223 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHhcCCCCC----------CC
Confidence 1235899999988889999999999999999999 999985332 222233332221110 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
...+.++.+++.+||+.+|++||++.++++.|+
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 123467899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=314.33 Aligned_cols=245 Identities=22% Similarity=0.360 Sum_probs=190.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcE----EEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~----vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|++. ++.. +++|..... .......++..|+..+++++|||||+++|++... .
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---~ 82 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR----SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---S 82 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc----cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC---c
Confidence 46678999999999999964 3443 555554321 1123345788899999999999999999998643 3
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+++|+|.+++.. ....++|..+..++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEEcCCccceec
Confidence 5799999999999999864 3356899999999999999999999988 999999999999999999999999988643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. +...|++||...+..++.++|||||||++||++| |+.||.... ..... ......... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~-~~~~~~~~~---~~~ 233 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR--PHEVP-DLLEKGERL---AQP 233 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHH-HHHHCCCcC---CCC
Confidence 21 2236899999988899999999999999999998 999985432 12211 112111111 111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.+++.+||..+|++|||+.|+++.|..+...
T Consensus 234 ------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 234 ------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11235678899999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=320.66 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=186.9
Q ss_pred ccccccCccceEEEEEEEEc--CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcC---C
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEED---E 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~---~ 552 (772)
++++.+|+|+||+||+|+.. ++..+|+|.+....... .....+.+|+++++.+ +||||++++++|... .
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 4 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred ceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC---CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 56788999999999999863 46789999876543222 1223456677766655 799999999998632 2
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
....++||||++ |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 225799999996 69999986555556899999999999999999999988 999999999999999999999999987
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-C----Cc-
Q 004124 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-P----LK- 698 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~----~~- 698 (772)
+... .++..|+|||.+....++.++|||||||++|||++|+.||..... .+.......... + ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~--~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCChhhchh
Confidence 5432 235578999999888999999999999999999999999964321 122222211100 0 00
Q ss_pred ------cccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 ------DIVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ------~~~d~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+. +..........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000 00111234467789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=323.97 Aligned_cols=249 Identities=18% Similarity=0.281 Sum_probs=192.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. ++..+|+|.+.... .....+++.+|++++++++||||+++++++..++ ..++|
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 81 (331)
T cd06649 8 ERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 81 (331)
T ss_pred eEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEE
Confidence 67788999999999999965 57788888776432 1234567999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ .|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 82 MEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKH-QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred eecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999999853 345889999999999999999999742 39999999999999999999999999876432
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh----cCCCCcc---------
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK----GEQPLKD--------- 699 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~----~~~~~~~--------- 699 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||..... .+.....-. +......
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA--KELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhcccccccccCCccccCcccccc
Confidence 245678999999988999999999999999999999999964321 111111000 0000000
Q ss_pred -----------------------ccCCccccc-cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 -----------------------IVDPTLKSF-QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 -----------------------~~d~~l~~~-~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+........ ......++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 11245678999999999999999999999875
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=319.37 Aligned_cols=240 Identities=20% Similarity=0.262 Sum_probs=190.0
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|+|+||.||+++.+ +|+.+|+|.+..+.... ....+.+..|++++++++||||+++++++..+. +.++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK--KSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--HLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc--chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--eEEEEEecCC
Confidence 578999999999864 58899999886433211 122345667999999999999999999998776 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--------C
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--------T 636 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--------~ 636 (772)
+|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++... .
T Consensus 77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 154 (277)
T cd05607 77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQR 154 (277)
T ss_pred CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeecc
Confidence 999998886555556899999999999999999999988 999999999999999999999999987532 2
Q ss_pred CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 637 AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 637 ~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
.++..|+|||.+.+..++.++||||+||++|||++|+.||..... ...+......... ..........
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 224 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE----------VKFEHQNFTE 224 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc----------cccccccCCH
Confidence 345578999999888899999999999999999999999964322 1122222222111 0001123456
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 715 ELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
++.+++.+||+.||++||+++|+++.+
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchhhh
Confidence 789999999999999999998876433
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=312.96 Aligned_cols=242 Identities=21% Similarity=0.359 Sum_probs=197.6
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|...+++.+++|.+..... ..++|.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 80 (261)
T cd05068 9 QLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM------DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--PIYIVT 80 (261)
T ss_pred eeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc------cHHHHHHHHHHHHHCCCCCccceeEEEecCC--Ceeeee
Confidence 56788899999999999988888899998764321 1356899999999999999999999998776 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++.......++|..+..++.|++.|+.|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 9999999999986544457899999999999999999999988 99999999999999999999999998754321
Q ss_pred ----C---CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 ----A---KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 ----~---~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+ ...|+|||...+..++.++||||||+++|||+| |+.||.... ........... ... ..+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-~~~---------~~~ 226 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--NAEVLQQVDQG-YRM---------PCP 226 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcC-CCC---------CCC
Confidence 1 125899999988899999999999999999999 999985332 22222222111 111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
...+..+.+++.+||+.+|++||++.++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 23456789999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=318.41 Aligned_cols=256 Identities=25% Similarity=0.368 Sum_probs=196.3
Q ss_pred ccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||++.. .++..+|+|.+..... ....+.|.+|++++++++||||+++++++...+...
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG----QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 5678899999999988753 3567899998764321 223467889999999999999999999987654435
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCCCcEEEeeccccccc
Confidence 7899999999999999853 35899999999999999999999988 999999999999999999999999997643
Q ss_pred CC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCCCcccc
Q 004124 636 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDIV 701 (772)
Q Consensus 636 ~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~ 701 (772)
.. +...|++||......++.++|||||||++|||+||+.|+........+........ .....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 22 22347899999888899999999999999999999999853322211111000000 00000111
Q ss_pred CCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 702 DPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 702 d~~l-~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
+... ...+...+.++.+++.+||+.+|++||+++++++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1100 1122345578999999999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=322.64 Aligned_cols=236 Identities=21% Similarity=0.308 Sum_probs=189.8
Q ss_pred cccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 484 GSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.+|+|+||.||+++. ..++.+|+|.+....... .......+.+|++++++++||||+++++++..++ ..++|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv 78 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR-NQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG--KLYLI 78 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh-hhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--eEEEE
Confidence 5678999999999985 357889999886432211 1223356789999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+.+.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 79 LEYLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred EeCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999999853 345788888899999999999999988 999999999999999999999999987532
Q ss_pred -----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 636 -----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||...+ ..........+... .+.
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~--~~~~~~~~~~~~~~-----------~~~ 221 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN--RKKTIDKILKGKLN-----------LPP 221 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCCC-----------CCC
Confidence 124567999999988889999999999999999999999996432 33333333333221 122
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
....++.+++.+||+.+|++|| ++.++++
T Consensus 222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 3346788999999999999999 7888765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=311.16 Aligned_cols=237 Identities=22% Similarity=0.348 Sum_probs=191.1
Q ss_pred ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
++|+|+||.||+|.++ ++..+++|++..... .....++|.+|+.++++++||||++++|++... ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN---DPALKDELLREANVMQQLDNPYIVRMIGICEAE---SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC---cHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CcEEEEe
Confidence 5789999999999753 567899998754322 233457899999999999999999999998643 3589999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC---
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA--- 638 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~--- 638 (772)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 76 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 76 LAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 9999999999853 346899999999999999999999988 999999999999999999999999987643211
Q ss_pred ---------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 639 ---------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 639 ---------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
...|+|||.+....++.++|||||||++|||+| |+.||.... ..++......+..+ ..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i~~~~~~----------~~ 219 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMIESGERM----------EC 219 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCCCC----------CC
Confidence 136889999988889999999999999999998 999996432 23333333222110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
+...+.++.++|.+||+.||++||++.+|.+.|+.
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 23345778899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=320.54 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=194.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||++... +++.||+|++....... ......+.+|++++++++||||+++++++..++ ..++|
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 78 (285)
T cd05605 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLV 78 (285)
T ss_pred eEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh--hhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--eEEEE
Confidence 46678899999999999964 67899999886533221 223456788999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999998886544456899999999999999999999988 9999999999999999999999999876432
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhcCCCCccccCCccccccH
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||........ +.+...... ....++.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~~ 226 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----------DQEEYSE 226 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----------cccccCc
Confidence 234578999999888999999999999999999999999964332111 111111111 0111233
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
..+..+.+++.+||+.||++|| ++.++++
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 4567788999999999999999 7778755
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=310.71 Aligned_cols=238 Identities=19% Similarity=0.342 Sum_probs=190.8
Q ss_pred ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+|+|+||.||+|++. .+..+|+|...... .....+.|.+|++++++++||||+++++++... ..++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN----EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---ALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc----ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---CeEEEEE
Confidence 3789999999999864 34568888775432 133456799999999999999999999998643 4689999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---- 637 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~---- 637 (772)
|+++|+|.+++.. ....+++..+.+++.|++.||+|||+++ ++||||||+|||++.++.+||+|||+++....
T Consensus 75 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 75 MASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY 151 (257)
T ss_pred eCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence 9999999999853 2456899999999999999999999988 99999999999999999999999998753221
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
....|+|||......++.++|||||||++||+++ |+.||... ...++......+... ..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~ 219 (257)
T cd05115 152 YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM--KGPEVMSFIEQGKRL----------DC 219 (257)
T ss_pred eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC--CHHHHHHHHHCCCCC----------CC
Confidence 1236899999988889999999999999999997 99999533 223333333222111 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+..+++++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 233457888999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=303.72 Aligned_cols=273 Identities=19% Similarity=0.252 Sum_probs=201.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++.++++|+||.||+|+.+ +++.||+|+++.....+.-. -.-.+||.+|.+++|||||.+..+....+-...|||
T Consensus 79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFP---ItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFP---ITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCc---chhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45677889999999999964 67889999987654332211 235799999999999999999999987665578999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~- 638 (772)
||||+. ||..+++. -.+.+...+...++.|+++|++|||... |+|||||++|+|+.+.|.+||+|||+|+.....
T Consensus 156 Me~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred HHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 999976 99998864 3467889999999999999999999988 999999999999999999999999999876554
Q ss_pred --------Cccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccccCCccc--
Q 004124 639 --------KTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVDPTLK-- 706 (772)
Q Consensus 639 --------~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~l~-- 706 (772)
+-.|.|||.+. ...|++..|+||+|||+.||+++++-|.+.. .+.+. ..++.. ..|. +.+.|...
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s-E~dQl-~~If~llGtPt-e~iwpg~~~l 308 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS-EIDQL-DKIFKLLGTPS-EAIWPGYSEL 308 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc-hHHHH-HHHHHHhCCCc-cccCCCcccc
Confidence 22578999875 4579999999999999999999998886432 22222 122211 1111 11111110
Q ss_pred ------------------cccHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 707 ------------------SFQEN-VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 707 ------------------~~~~~-~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
.+... ..+.-++|+...+..||++|.|+.|.++. +.-...+.+..|..-|.|.+..+
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h--~~F~e~P~p~~P~~~Pt~P~k~~ 384 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH--EYFRETPLPIDPSMFPTWPAKSE 384 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc--cccccCCCCCChhhcCCCccccc
Confidence 01111 34678899999999999999999998763 22222223333444455544443
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=314.05 Aligned_cols=238 Identities=21% Similarity=0.362 Sum_probs=201.3
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.|-+|. ...|+.||||.+++....+ +...-.+.+||++|+.++||||+.+|.+|+..+ .+.||
T Consensus 56 E~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd--eqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--KIviv 131 (668)
T KOG0611|consen 56 EITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD--EQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--KIVIV 131 (668)
T ss_pred HHHHHhcCCcccceeehhhccCCcEeehhhhhhhhccc--HHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--eEEEE
Confidence 567789999999999998 5789999999987665544 334456899999999999999999999999887 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||..+|.|++|+. +.+.|+......++.||..|+.|+|..+ ++|||||.+|||||.++++||+|||++...
T Consensus 132 MEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 132 MEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 99999999999995 4577999999999999999999999988 999999999999999999999999997643
Q ss_pred ----CCCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 636 ----TAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
..+.+-|++||.+.+..|. +..|-||+||+||-|+.|..||++. +....++.+..|.. . .|
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--Dhk~lvrQIs~GaY--r---EP------- 273 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--DHKRLVRQISRGAY--R---EP------- 273 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--hHHHHHHHhhcccc--c---CC-------
Confidence 4567789999999998885 8899999999999999999999643 34444555544421 1 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.+....-||++|+..+|++|.|+.||...
T Consensus 274 ~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 274 ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 122345679999999999999999999865
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=329.99 Aligned_cols=261 Identities=18% Similarity=0.291 Sum_probs=210.1
Q ss_pred hcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCc
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
++| ++++.+|+|.||+|+.+..+ +++.+|||++++...-. .+..+..+.|-+++.-. +||.+++++..++..+
T Consensus 368 ~~F-~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~--~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~-- 442 (694)
T KOG0694|consen 368 DDF-RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ--RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE-- 442 (694)
T ss_pred cce-EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec--cccHHHHHHHHHHHHHhccCCeEeecccccccCC--
Confidence 455 67889999999999999965 56789999987654332 34456778888887777 6999999999999888
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+.|.||||+.||++..+. ..+.++...+.-+|..|+.||+|||+++ ||+||||.+|||||.+|.+||+|||+++.
T Consensus 443 ~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred eEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcccCcEEecccccccc
Confidence 889999999999955443 4567999999999999999999999999 99999999999999999999999999874
Q ss_pred C---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 635 T---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ..|++.|+|||++.+..|+.+.|.|||||+||||+.|..||.++ +-++....++.++..
T Consensus 518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--dEee~FdsI~~d~~~--------- 586 (694)
T KOG0694|consen 518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--DEEEVFDSIVNDEVR--------- 586 (694)
T ss_pred cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHhcCCCC---------
Confidence 3 34677899999999999999999999999999999999999644 334555555544322
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhhh
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILS 768 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~~ 768 (772)
++...+.+...+|++.+.++|++|..+.| .........|.+-..+|++++..+
T Consensus 587 --yP~~ls~ea~~il~~ll~k~p~kRLG~~e--------~d~~~i~~hpFFr~i~w~~L~~r~ 639 (694)
T KOG0694|consen 587 --YPRFLSKEAIAIMRRLLRKNPEKRLGSGE--------RDAEDIKKHPFFRSIDWDDLLNRR 639 (694)
T ss_pred --CCCcccHHHHHHHHHHhccCcccccCCCC--------CCchhhhhCCccccCCHHHHhhcc
Confidence 23445678999999999999999986621 111122345777777888876543
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=331.97 Aligned_cols=247 Identities=21% Similarity=0.326 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~ 553 (772)
.+.+.+|+|+||.||+|+.. .+..||||++..... ....+.|.+|++++++++ |||||+++|+|.+.+
T Consensus 40 ~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 40 VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR----SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 56678899999999999853 134689998854321 233467999999999996 999999999998766
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++|||||++|+|.++++...
T Consensus 115 -~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 115 -PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred -ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 6799999999999999886421
Q ss_pred -------------------------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC
Q 004124 577 -------------------------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 577 -------------------------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld 619 (772)
...+++..++.++.|+++||+|||+.+ |+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~ 271 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEe
Confidence 124788889999999999999999988 99999999999999
Q ss_pred CCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHH
Q 004124 620 EDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687 (772)
Q Consensus 620 ~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~ 687 (772)
+++.+||+|||+++.... +...|+|||.+.+..++.++|||||||++|||++ |..||...... ...
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~ 349 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STF 349 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHH
Confidence 999999999998764211 2245899999988899999999999999999997 99998643211 111
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.......... ..+...+.++.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 350 ~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 350 YNKIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1112211110 1123445788999999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=311.56 Aligned_cols=250 Identities=21% Similarity=0.353 Sum_probs=201.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+|+. .++..++||.+......+ .....+|.+|+++++.++||||+++++++..++ ..++|
T Consensus 5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v 80 (267)
T cd08229 5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIV 80 (267)
T ss_pred hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh--HHHHHHHHHHHHHHHHccCCchhhhhheeEeCC--eEEEE
Confidence 4567788999999999995 578899999876533222 334467999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++++|.+++... ....+++.....++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999988632 2356899999999999999999999988 9999999999999999999999999865322
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.+...|+|||...+..++.++||||||+++|||++|..||.....+...+......... +.. .
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~--~ 229 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-------PPL--P 229 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCC-------CCC--C
Confidence 23456899999988889999999999999999999999996544443333332221110 111 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.....+++.+++.+||+.+|++||||.+|++.++++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1235678999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=313.90 Aligned_cols=248 Identities=21% Similarity=0.345 Sum_probs=197.4
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|+|+||.||+|+.. ++..+++|...... ....+.+.+|++++++++|+||+++++++...+
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 80 (291)
T cd05094 8 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-----LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-- 80 (291)
T ss_pred EEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-----HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC--
Confidence 45678889999999999843 34557777764322 223467899999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
..++||||+++|+|.+++.... ...++|..++.++.|++.|++|||+.+ |+||||||+|||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 5799999999999999986432 234899999999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004124 621 DYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++.+||+|||+++.... +...|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+...
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~ 236 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--NTEVIE 236 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHH
Confidence 99999999998764321 1335899999988999999999999999999999 999985332 222222
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
....+.. . ......+.++.+++.+||+.+|++||++.+|++.|+++.+..+
T Consensus 237 ~~~~~~~--~--------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 237 CITQGRV--L--------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred HHhCCCC--C--------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 2222111 0 1112345678899999999999999999999999999977543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=296.42 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=201.3
Q ss_pred ccccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC---CCc
Q 004124 479 FSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED---EPF 554 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~---~~~ 554 (772)
.+.+...+|+|+|+-||.++ ..+++.+|+|++.-... ...+..++|++..++++||||+++++++..+ ...
T Consensus 22 Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~-----~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 22 RYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ-----EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred eEEEeeeecCCCceeeeeecccCcccchhhheeeccch-----HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 35788899999999999998 67788999999876542 2356789999999999999999999987543 223
Q ss_pred eEEEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
+.||+++|...|+|.+.+... ++..+++.+.+.|+.|+++||++||+..|+++||||||.|||+.+.+.+++.|||.+
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 579999999999999998654 345799999999999999999999999999999999999999999999999999986
Q ss_pred cCCCC------------------CCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh
Q 004124 633 NNTTA------------------AKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691 (772)
Q Consensus 633 ~~~~~------------------~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~ 691 (772)
+.... .+..|.|||.+. +...++++|||||||+||+|+.|..||+... -
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~----------~ 246 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY----------Q 246 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh----------h
Confidence 54321 234688999974 5567899999999999999999999996211 0
Q ss_pred hcCCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 692 KGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.|..-...+..+.+. .-....++.+.++++.|++.||.+||++.+++..++++.
T Consensus 247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111111112222211 111236788999999999999999999999999988763
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=310.53 Aligned_cols=243 Identities=21% Similarity=0.361 Sum_probs=195.4
Q ss_pred ccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.. ...+++|.+.... ......+|.+|+.++.+++||||+++++++...+ ..
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 80 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--PV 80 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC--ce
Confidence 466788999999999999753 3578888775432 2334567999999999999999999999998776 57
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 81 ~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999998643 346899999999999999999999988 9999999999999999999999999876542
Q ss_pred -----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.....|+|||...+..++.++||||||+++|||++ |..||... ...+.......+. ..
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~-~~------- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM--SNQDVIKAVEDGY-RL------- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHcCC-CC-------
Confidence 11235899999988899999999999999999998 99998532 2222222222211 10
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+..+++.+.+++.+||+.+|++||++.||++.|+++
T Consensus 228 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 --PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01123456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=314.00 Aligned_cols=243 Identities=23% Similarity=0.379 Sum_probs=196.0
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||.||+|+..+ +..+++|.+..... ....+.|.+|++++++++|+||+++++++....
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 81 (280)
T cd05049 8 VLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS----NDARKDFEREAELLTNFQHENIVKFYGVCTEGD-- 81 (280)
T ss_pred hHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC----HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC--
Confidence 567888999999999998643 47799998754322 223568999999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhc------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
..++||||+++|+|.+++.... ...+++.....++.|++.|++|||+.+ ++||||||+||+++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~ 159 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYDL 159 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCCC
Confidence 6799999999999999986432 235789999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHH
Q 004124 623 AAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEY 690 (772)
Q Consensus 623 ~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~ 690 (772)
.+||+|||+++.... ....|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+.....
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~~~ 237 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIECI 237 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHH
Confidence 999999998764211 1235899999999999999999999999999999 999985332 23333333
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
..+.. ...+...+.++.+++.+||+.||++||++.||++.|++
T Consensus 238 ~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 TQGRL----------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HcCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 22211 11122345678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=329.92 Aligned_cols=244 Identities=20% Similarity=0.280 Sum_probs=191.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.+|+|++....... ......+.+|++++.+++|||||++++++.+.+ ..++
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~--~~~l 78 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN--RNQVAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYF 78 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--EEEE
Confidence 36788999999999999985 467889999886543221 233467899999999999999999999998876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 v~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 79 VMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999853 346888888999999999999999988 999999999999999999999999986421
Q ss_pred -----------------------------------------------------CCCCccccchhhhccCCCCCCCchHHH
Q 004124 636 -----------------------------------------------------TAAKTGSAAMELLETSAVDLESNVYSF 662 (772)
Q Consensus 636 -----------------------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSf 662 (772)
..++..|+|||.+.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 135567999999988899999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHH--cccCCCCCCCCHHHHHHH
Q 004124 663 GTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN--CVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 663 GvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~--Cl~~dP~~RPs~~evl~~ 740 (772)
||++|||+||+.||..... .+............. . + .......++.+++.+ |+..+|.+||++.|+++.
T Consensus 235 G~il~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~-~--~----~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTP--TETQLKVINWENTLH-I--P----PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred hhHHHHHHhCCCCCcCCCH--HHHHHHHHccccccC-C--C----CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999999964432 121222221111110 0 0 011234567778877 666777779999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=321.49 Aligned_cols=250 Identities=18% Similarity=0.273 Sum_probs=191.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+++.. ++..+++|.+..... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 81 (333)
T cd06650 8 EKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 81 (333)
T ss_pred heeccccCCCCEEEEEEEECCCCcEEEEEEeecccC----HHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--EEEEE
Confidence 67788999999999999976 577788887654321 233567999999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+. + |+||||||+|||+++++.+||+|||++....
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 82 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999999853 34588899999999999999999974 5 9999999999999999999999999876322
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH-HHhhcCCCCccc----------
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS-EYLKGEQPLKDI---------- 700 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~~---------- 700 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||............ ....+.......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence 2455799999998888999999999999999999999999643221111110 000000000000
Q ss_pred ---cCCc------------------ccccc-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 701 ---VDPT------------------LKSFQ-ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 701 ---~d~~------------------l~~~~-~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+. ....+ .....++.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000 00000 1134678899999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=325.47 Aligned_cols=243 Identities=17% Similarity=0.248 Sum_probs=188.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++...... .......+.+|++++.+++|+||+++++++.+.. ..++|
T Consensus 4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~--~~~lv 79 (363)
T cd05628 4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL--NLYLI 79 (363)
T ss_pred eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--HhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--eEEEE
Confidence 56788999999999999864 5789999988643221 1233457889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 80 MEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999863 356899999999999999999999988 999999999999999999999999987532
Q ss_pred ----------------------------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCc
Q 004124 636 ----------------------------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRIS 675 (772)
Q Consensus 636 ----------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P 675 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 1345679999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcc--cCCCCCCCCHHHHHHH
Q 004124 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV--HPDPKQRPSMRGIAAK 740 (772)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl--~~dP~~RPs~~evl~~ 740 (772)
|.... ..+....+....... .+.+. ....+++.+++.+++ ..++..||+++||++.
T Consensus 236 f~~~~--~~~~~~~i~~~~~~~--~~p~~-----~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 236 FCSET--PQETYKKVMNWKETL--IFPPE-----VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCC--HHHHHHHHHcCcCcc--cCCCc-----CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 96432 233333333221111 01110 112345666666533 3344467999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=318.68 Aligned_cols=246 Identities=21% Similarity=0.352 Sum_probs=197.1
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|+|+||+||++... ++..+++|.+.... ....+.+.+|++++.+++||||+++++++...+
T Consensus 8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 80 (288)
T cd05093 8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-- 80 (288)
T ss_pred eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 56678899999999999852 34557787765332 233567999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhc-----------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE-----------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-----------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~ 623 (772)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 158 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccCCc
Confidence 5799999999999999986332 235899999999999999999999988 999999999999999999
Q ss_pred EEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHh
Q 004124 624 AKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYL 691 (772)
Q Consensus 624 ~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~ 691 (772)
+||+|||+++.... +...|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+......
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--~~~~~~~i~ 236 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNEVIECIT 236 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH
Confidence 99999999864321 1236899999988899999999999999999999 898885332 233333333
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+... ..+...+.++.+++.+||+.+|.+|||+.|+.+.|+++...
T Consensus 237 ~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 237 QGRVL----------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred cCCcC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 32111 01122345789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=308.49 Aligned_cols=238 Identities=22% Similarity=0.385 Sum_probs=192.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|+++.+..+++|.+..... ...+|.+|++++++++||||+++++++...+ ..++||
T Consensus 7 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~ 78 (256)
T cd05059 7 TFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM------SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--PIFIVT 78 (256)
T ss_pred chhhhhccCCCceEEEeEecCCccEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ceEEEE
Confidence 45677889999999999988777899998754321 1246889999999999999999999998776 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++... ...+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 79 EYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred ecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999998643 346899999999999999999999988 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
....|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+.......+... ..+
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~----------~~~ 223 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS--NSEVVESVSAGYRL----------YRP 223 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC--HHHHHHHHHcCCcC----------CCC
Confidence 1125899999988899999999999999999999 888985332 22222222221110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...+.++.+++.+||+.+|++||++.|+++.|
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 22456899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=316.70 Aligned_cols=249 Identities=17% Similarity=0.238 Sum_probs=190.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 78 (287)
T cd07848 4 EVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN---EEVKETTLRELKMLRTLKQENIVELKEAFRRRG--KLYLV 78 (287)
T ss_pred eEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhhHHHHHHHHHhCCCccccchhhhEecCC--EEEEE
Confidence 57788999999999999975 5778999988654221 223467889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++++.+..+.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 79 FEYVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred EecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99999877765432 3356899999999999999999999988 9999999999999999999999999976432
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHH--HHHh-----------hcCCC
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA--SEYL-----------KGEQP 696 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~--~~~~-----------~~~~~ 696 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||...... .... .... .....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhCCCCHHHHHhhhccch
Confidence 2345689999998888999999999999999999999999643221 1110 0000 00000
Q ss_pred CccccCCcc-------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 LKDIVDPTL-------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~~~~d~~l-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.. .......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 0011224567999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=327.12 Aligned_cols=235 Identities=19% Similarity=0.279 Sum_probs=184.5
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.++.+|+|+||+||+|+.. +++.||+|.+..... ....+.+.+|++++++++|+||+++++++...+ ..++||
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 151 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE----DTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--EIQVLL 151 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc----HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--eEEEEE
Confidence 4677899999999999965 688999998754321 234567999999999999999999999998776 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.... ...+.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 999999986542 3456777889999999999999988 9999999999999999999999999876422
Q ss_pred -----CCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 -----AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+.. ...+.++|||||||++|||++|+.||..... +.............
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---------- 293 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP---------- 293 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC----------
Confidence 34567999998742 2345689999999999999999999963221 22221111111110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.........++.+++.+||+.||++||++.|+++.
T Consensus 294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11123445678999999999999999999999875
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=308.12 Aligned_cols=237 Identities=25% Similarity=0.407 Sum_probs=190.1
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||.||+|+.. +++.+++|...... .......|.+|++++++++||||+++++++...+ ..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 75 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMELV 75 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--CeEEEEeec
Confidence 5788999999999964 68889999765322 1234567999999999999999999999998876 579999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-----
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----- 638 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~----- 638 (772)
++++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 76 QGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred cCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 99999999853 2346899999999999999999999988 999999999999999999999999987643211
Q ss_pred ------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 639 ------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 639 ------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
...|+|||.+.+..++.++|||||||++|||++ |..||.... ........... ... ..+..
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~--~~~~~~~~~~~-~~~---------~~~~~ 220 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS--NQQTREAIEQG-VRL---------PCPEL 220 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC--HHHHHHHHHcC-CCC---------CCccc
Confidence 124899999988889999999999999999998 888885322 11111111111 110 11233
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.+.++.+++.+||+.+|++||++.|+.++|+
T Consensus 221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 4567899999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=333.18 Aligned_cols=240 Identities=24% Similarity=0.383 Sum_probs=198.0
Q ss_pred cccccCccceEEEEEEEEc--CC--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS--SG--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~--~~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+.+.+|+|.||.|++|.|. +| ..||||.+...... ....+|++|+.+|.+|+|||+++|||+..+. -..
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~----~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~m 186 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN----AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAM 186 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc----hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhh
Confidence 4567889999999999986 33 46888887654432 2467899999999999999999999999874 358
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
||+|.++.|+|.+.|+......|-......++.|||.||+||.+++ .|||||..+|+||.....+||+|||+.+....
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999999998755666778888899999999999999888 99999999999999999999999999886554
Q ss_pred CCc------------cccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 638 AKT------------GSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 638 ~~~------------~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
+.. .|.|||.+...+++.+||||+|||++|||+| |+.||.+..+ ...++.+ .+.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qIL~~i----------D~~e 332 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQILKNI----------DAGE 332 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHHHHhc----------cccc
Confidence 432 4679999999999999999999999999999 8899964332 2222221 1222
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
...-++.|+++++++|+.||+.+|++||+|.+|.+.+-
T Consensus 333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 33446778999999999999999999999999986543
|
|
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=307.73 Aligned_cols=249 Identities=20% Similarity=0.342 Sum_probs=203.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|... +++.+++|.+......+ ....+.+.+|++++++++|+||+++++++...+ ..++|
T Consensus 5 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~--~~~lv 80 (267)
T cd08224 5 KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD--AKARQDCLKEIDLLKQLDHPNVIKYLASFIENN--ELNIV 80 (267)
T ss_pred eeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc--hhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEE
Confidence 55677889999999999976 78899999876433222 233567999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++|+|.+++... ....+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999988542 2355899999999999999999999988 9999999999999999999999999875322
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.+...|.|||.+.+..++.++|||||||++|||++|+.||.....+..+.......+.. ...
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~ 228 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY----------PPL 228 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC----------CCC
Confidence 23346889999988889999999999999999999999997555554444333222211 111
Q ss_pred c-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 709 Q-ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 709 ~-~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
+ +....++.+++.+||..+|++||++.+|++.|+++.
T Consensus 229 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1 245567889999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=320.53 Aligned_cols=229 Identities=19% Similarity=0.265 Sum_probs=185.3
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.+ +++.+|+|.+...... .....+.+..|.+++..+ +||||+++++++...+ ..++||||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--~~~iv~Ey 77 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL--QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--RLFFVMEF 77 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh--hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--EEEEEEcC
Confidence 4688999999999965 5788999988643211 122345677888888877 6999999999998876 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~ 153 (320)
T cd05590 78 VNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153 (320)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence 999999988853 356899999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+.... +....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------~~~~~ 220 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILNDEVVY-----------PTWLS 220 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCCCC-----------CCCCC
Confidence 12456799999999889999999999999999999999999643 3334344433322111 12234
Q ss_pred HHHHHHHHHcccCCCCCCCCH
Q 004124 714 EELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.++.+++.+||+.||++||++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 678899999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=320.36 Aligned_cols=234 Identities=16% Similarity=0.245 Sum_probs=188.7
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. +++.+|+|.+...... .....+.+..|.+++..+ +||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--~~~lv~E~ 77 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL--QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--RLFFVMEY 77 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--eEEEEEeC
Confidence 4788999999999965 5788999988653221 123345678889998876 8999999999998877 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (321)
T cd05591 78 VNGGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 153 (321)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence 999999988853 356899999999999999999999988 999999999999999999999999987532
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+.... +....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 220 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD--NEDDLFESILHDDVLY-----------PVWLS 220 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCC-----------CCCCC
Confidence 12456799999999889999999999999999999999999643 3334444444332211 11234
Q ss_pred HHHHHHHHHcccCCCCCCC-------CHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-------SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-------s~~evl~ 739 (772)
.++.+++.+||+.||++|| ++.++++
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 6788999999999999999 7777764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=296.03 Aligned_cols=243 Identities=20% Similarity=0.328 Sum_probs=202.2
Q ss_pred cccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+| ++-+.+|+|.||.||.|+. +++..||+|++.+.... ......++.+|+++-+.|+||||.++|||+.+.. ..
T Consensus 23 df-eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~--~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~--ri 97 (281)
T KOG0580|consen 23 DF-EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQIL--KTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK--RI 97 (281)
T ss_pred hc-cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHH--HhcchhhhhheeEeecccCCccHHhhhhheeccc--ee
Confidence 44 5667789999999999995 46788999988755432 2345678999999999999999999999999887 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC--
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-- 634 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~-- 634 (772)
||++||.++|+++..|.......++......++.|+|.|+.|+|.++ ||||||||+|+|++.++..||+|||.+-.
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999998666777888888899999999999999988 99999999999999999999999997532
Q ss_pred -----CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 635 -----TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 -----~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+..++.-|.+||..++..++.+.|+|++||+.||++.|..||.... ..+..+++.+-. +. ++
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~k~~-----~~------~p 242 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIRKVD-----LK------FP 242 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHHHcc-----cc------CC
Confidence 3345567889999999999999999999999999999999996433 333333333221 11 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.++|.+|+..+|.+|.+..|+++.
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 4556788999999999999999999998763
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=313.76 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=195.6
Q ss_pred ccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--- 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--- 553 (772)
++.+.+|+|+||.||+|+... +..+|+|++..... .......+.+|++.+++++||||+++++++...+.
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 345678899999999998642 36799998764322 12334679999999999999999999998876442
Q ss_pred -ceEEEEEeccCCCChhhhhhhh----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 554 -FTRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 554 -~~~~LV~Ey~~~GsL~~~L~~~----~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
...++|+||+++|+|..++... ....+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCCCeEEECC
Confidence 2368999999999999988543 2246899999999999999999999988 99999999999999999999999
Q ss_pred ccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 629 FSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 629 FGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
||+++.... ....|+|||.+....++.++|||||||++|||++ |..||.... ..+.......+..
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~- 233 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDYLRHGNR- 233 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC-
Confidence 999864321 1235889999988889999999999999999999 888885332 2233333322211
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
...+..++.++.+++.+||+.||++||++.|+++.|+++
T Consensus 234 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 ---------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 112234557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=316.96 Aligned_cols=251 Identities=24% Similarity=0.413 Sum_probs=197.4
Q ss_pred ccccccCccceEEEEEEEEcC-Cc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|+..+ +. .+++|.++... .....+.|.+|++++.++ +||||+++++++...+ ..
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~ 78 (297)
T cd05089 5 KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA----SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG--YL 78 (297)
T ss_pred eeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC----CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--cc
Confidence 456788999999999998753 32 45676654221 122346789999999999 7999999999998766 57
Q ss_pred EEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
++|+||+++|+|.++++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGENL 156 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCCC
Confidence 99999999999999986432 135889999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCCC--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004124 623 AAKISDFSFWNNTTA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 623 ~~kLsDFGla~~~~~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
.+||+|||++..... ....|+|||......++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~--~~~~~~~~~~~~ 234 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM--TCAELYEKLPQG 234 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhcC
Confidence 999999998753211 1235899999988889999999999999999998 99999533 233333332222
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
.. ...+..++.++.+++.+||+.+|.+||++.++++.|+++.......
T Consensus 235 ~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~ 282 (297)
T cd05089 235 YR----------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY 282 (297)
T ss_pred CC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence 10 0112234567889999999999999999999999999988766543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=308.51 Aligned_cols=241 Identities=25% Similarity=0.423 Sum_probs=195.3
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|... +..+++|...... ..+.|.+|+.++++++|+||+++++++...+. ..++||
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~ 79 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 79 (256)
T ss_pred eeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC-ceEEEE
Confidence 56778899999999999875 6778888764321 23578999999999999999999998754432 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++......+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 9999999999987555556899999999999999999999988 99999999999999999999999998764322
Q ss_pred ---CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|+|||......++.++|||||||++|||++ |+.||... ...+.......+..+ ...+.++
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~~~~~ 225 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKM----------DAPDGCP 225 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCCCC----------CCCCCCC
Confidence 2336899999988899999999999999999998 99998532 333433333222111 1112345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 226 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 226 PVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 6788999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=317.27 Aligned_cols=243 Identities=22% Similarity=0.387 Sum_probs=193.3
Q ss_pred ccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||+||+|+. ..+..+++|.+..... ......|.+|++++++++||||+++++++...+ .
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 81 (283)
T cd05090 8 RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN----PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--P 81 (283)
T ss_pred eeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC----HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC--c
Confidence 5678899999999999984 2457788888764321 223467899999999999999999999998776 5
Q ss_pred EEEEEeccCCCChhhhhhhhc---------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQE---------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~---------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
.++||||+++|+|.+++.... ...+++...+.++.|++.||+|||+.+ |+||||||+|||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 799999999999999985321 234788999999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004124 621 DYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++.+||+|||+++.... ....|+|||.+.+..++.++|||||||++|||+| |..||.... ......
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~ 237 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIE 237 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHH
Confidence 99999999998864321 1235899999988889999999999999999999 988985432 222222
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
..... ... ..+..++.++.+++.+||+.+|++||++.+|.+.|..
T Consensus 238 ~~~~~-~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 238 MVRKR-QLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHcC-CcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22211 110 1223345678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=323.48 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=194.8
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|.|+||.||+|+.. +++.||+|++..... ....+.+.+|++++.++ +|+||++++++|...+.
T Consensus 10 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 10 KLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT----ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred hhhcccccCcCceEEeccccccccccccceeeeeeccCCCC----HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 56788899999999999642 346899998753221 22345688899999999 89999999998876543
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..+++|||+++|+|.+++....
T Consensus 86 -~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 86 -PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred -CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5789999999999999885321
Q ss_pred --cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-----------CCcccc
Q 004124 577 --AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSA 643 (772)
Q Consensus 577 --~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-----------~~~~~~ 643 (772)
...++|..+.+++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.... +...|+
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 136899999999999999999999988 99999999999999999999999998864321 123689
Q ss_pred chhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHH
Q 004124 644 AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN 722 (772)
Q Consensus 644 aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~ 722 (772)
|||.+.+..++.++|||||||++|||++ |+.||...... +............ ..+.....++.+++.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRLKEGTRM---------RAPEYATPEIYSIMLD 311 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHHhccCCC---------CCCccCCHHHHHHHHH
Confidence 9999999999999999999999999998 99998642221 1111112111110 1112345678999999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhhh
Q 004124 723 CVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 723 Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
||+.+|++||++.|+++.|+++.+
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=323.62 Aligned_cols=235 Identities=20% Similarity=0.267 Sum_probs=189.9
Q ss_pred ccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||.||+++. .+++.+|+|.+....... ......+.+|++++..++||||+++++++...+ ..++||||+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--~~~lv~E~~ 77 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEYA 77 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--EEEEEEeCC
Confidence 468899999999985 468899999886532211 223456788999999999999999999998877 689999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
++|+|..++.. ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (325)
T cd05594 78 NGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 153 (325)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence 99999988753 3568999999999999999999997 67 999999999999999999999999987532
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+........... ++....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~--~~~~~~~~i~~~~~~-----------~p~~~~ 220 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIR-----------FPRTLS 220 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC--CHHHHHHHHhcCCCC-----------CCCCCC
Confidence 12456799999999899999999999999999999999999533 223333333222111 122344
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
.++.+++.+||+.||++|+ ++.++++.
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 6788999999999999996 89998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=321.92 Aligned_cols=238 Identities=19% Similarity=0.282 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..+..+|+|.||.||||.. ..++.||+|++...... ...+++.+|+.+|.+++++||.++||.+..+. ..+++
T Consensus 16 ~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~----deIediqqei~~Ls~~~~~~it~yygsyl~g~--~Lwii 89 (467)
T KOG0201|consen 16 TKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE----DEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--KLWII 89 (467)
T ss_pred ccchhccccccceeeeeeeccccceEEEEEechhhcc----hhhHHHHHHHHHHHhcCcchHHhhhhheeecc--cHHHH
Confidence 3347788999999999994 57889999998765433 34568899999999999999999999888877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc------
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------ 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~------ 633 (772)
||||.+|++.+.|.. ...++.....-|..++..|+.|||..+ .+|||||+.|||+..+|.+|++|||++-
T Consensus 90 Mey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999999852 333466677778999999999999988 9999999999999999999999999863
Q ss_pred ---CCCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 634 ---NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 634 ---~~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
....+++.|||||++....|+.|+||||+||+.+||++|.+|+..... . .-+.-+-....+....
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--m----------rvlflIpk~~PP~L~~ 233 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--M----------RVLFLIPKSAPPRLDG 233 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--c----------eEEEeccCCCCCcccc
Confidence 445678899999999988999999999999999999999999853221 0 0001111111122334
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++..+.+++..|+.++|+.||+|.++++.
T Consensus 234 ~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 677889999999999999999999998854
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=316.51 Aligned_cols=243 Identities=21% Similarity=0.340 Sum_probs=192.4
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|... .+..+|+|++..... .....+|.+|+.+++.++||||+++++++....
T Consensus 9 ~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-- 82 (277)
T cd05062 9 TMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 82 (277)
T ss_pred eeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--
Confidence 56788899999999999753 245788887643221 123457899999999999999999999998766
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++||||+++|+|.++++... ...++|..++.++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCCCCEEE
Confidence 6799999999999999986422 124678899999999999999999987 999999999999999999999
Q ss_pred ccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.... ....|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~--~~~~~~~~~~~~~ 238 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM--SNEQVLRFVMEGG 238 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCC
Confidence 99998763211 1235899999988899999999999999999999 78888532 2233333222221
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
. ...+...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 239 ~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 239 L----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred c----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 11122345678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=314.42 Aligned_cols=237 Identities=20% Similarity=0.247 Sum_probs=188.1
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|+|+||+||+++.. +++.+|+|++....... ....+.+..|++++++++|+||+++.+++.... ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK--RKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--DLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh--hHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--eEEEEEeCCC
Confidence 578999999999865 67899999886433221 222356788999999999999999999988776 6799999999
Q ss_pred CCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 565 NGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 565 ~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+|+|..++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 154 (280)
T cd05608 77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT 154 (280)
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc
Confidence 99998887532 3356899999999999999999999988 9999999999999999999999999875322
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC--HHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||...... ............ ...++.
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 223 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS-----------VTYPDK 223 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-----------CCCccc
Confidence 2345799999999999999999999999999999999999643322 111111111110 112234
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.+.++.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 567788999999999999999 6666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=314.59 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=194.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchh---------hhhHHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW---------SKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~---------~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
++++..+|+|.||.|-+|+. .+++.||+|++.++..... .....++..+||.+|++++|||||+|+.+..
T Consensus 99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLD 178 (576)
T KOG0585|consen 99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLD 178 (576)
T ss_pred eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeec
Confidence 47888999999999999995 4788999999876543221 0011257899999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhhhhhccCC-CCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 550 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~-l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
++.....|||+|||..|.+...- .... ++..+..+|..++..||+|||.++ ||||||||+|+||+++|++||+|
T Consensus 179 DP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~g~VKIsD 253 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSDGTVKISD 253 (576)
T ss_pred CcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCCCcEEeec
Confidence 87776899999999999885432 2333 899999999999999999999999 99999999999999999999999
Q ss_pred ccCccCC--------------CCCCccccchhhhccCC----CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH
Q 004124 629 FSFWNNT--------------TAAKTGSAAMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690 (772)
Q Consensus 629 FGla~~~--------------~~~~~~~~aPE~~~~~~----~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~ 690 (772)
||.+... ..|++.++|||...++. .+.+.||||+||+||-|+.|+.||..+ ...+...++
T Consensus 254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~--~~~~l~~KI 331 (576)
T KOG0585|consen 254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD--FELELFDKI 331 (576)
T ss_pred cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc--hHHHHHHHH
Confidence 9986532 34677899999876522 357899999999999999999999532 223333333
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
+...-.+ ...++..+++.+||+++|.+||++|.+..||....
T Consensus 332 vn~pL~f---------P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 332 VNDPLEF---------PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred hcCcccC---------CCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 3221111 11234667899999999999999999999987644
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=325.99 Aligned_cols=241 Identities=18% Similarity=0.276 Sum_probs=192.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||+||+|+.. +++.||||++...... .......+.+|++++..++||||+++++++.+++ ..++|
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv 79 (364)
T cd05599 4 ESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML--EKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN--YLYLI 79 (364)
T ss_pred eEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--eEEEE
Confidence 56788999999999999965 6789999998643221 1233456889999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 80 MEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred ECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999999863 346899999999999999999999988 9999999999999999999999999875321
Q ss_pred --------------------------------------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcC
Q 004124 637 --------------------------------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITG 672 (772)
Q Consensus 637 --------------------------------------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG 672 (772)
.++..|+|||.+....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 245679999999989999999999999999999999
Q ss_pred CCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 004124 673 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS---MRGIAA 739 (772)
Q Consensus 673 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs---~~evl~ 739 (772)
+.||.... ..+............. . +. ....++++.+++.+|+. +|.+|++ +.|+++
T Consensus 236 ~~Pf~~~~--~~~~~~~i~~~~~~~~-~--~~----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDN--PQETYRKIINWKETLQ-F--PD----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCC--HHHHHHHHHcCCCccC-C--CC----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99996432 2333333332211111 0 00 01234677889999996 8999997 888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=313.34 Aligned_cols=243 Identities=20% Similarity=0.372 Sum_probs=195.1
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||.||+|+... +..+|+|++..... ....+.|.+|+.++.+++|||||++++++...+
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-- 81 (283)
T cd05091 8 RFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE----GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ-- 81 (283)
T ss_pred HHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC----HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC--
Confidence 467788999999999998642 46789998764321 233467899999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhh--------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ--------------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~--------------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
..++++||+++++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 579999999999999998521 1235788899999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004124 621 DYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++.+||+|||+++.... ....|+|||.+....++.++|||||||++|||+| |..||... ...++..
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~~~ 237 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVIE 237 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHH
Confidence 99999999998764321 1236899999988889999999999999999998 88888532 2334444
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
....... ...+..++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 238 ~i~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQV----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCc----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 3333211 11223456778899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=319.66 Aligned_cols=237 Identities=16% Similarity=0.293 Sum_probs=188.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHH---hcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL---SKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L---~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|+|+||.||+|... +++.+|||++....... ....+.+.+|++++ ++++||||+++++++...+ ..
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~--~~ 77 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA--RDEVESLMCEKRIFETANSERHPFLVNLFACFQTED--HV 77 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC--EE
Confidence 46778899999999999864 67899999986542111 22234566666554 5678999999999998877 78
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
++||||+++|+|..+++ ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 78 CFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999999988874 346899999999999999999999988 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+.......+...
T Consensus 153 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~--~~~~~~~~i~~~~~~----------- 219 (324)
T cd05589 153 GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD--DEEEVFDSIVNDEVR----------- 219 (324)
T ss_pred CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC-----------
Confidence 12456799999999889999999999999999999999999633 333333333333211
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.+...+.++.+++.+||+.||++|| ++.++++
T Consensus 220 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 220 YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1223456788999999999999999 4666654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=308.52 Aligned_cols=240 Identities=23% Similarity=0.391 Sum_probs=196.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++++|+|+||.||+|..+++..+++|.+..... ..++|.+|++++++++|+||+++++++... ..++||
T Consensus 9 ~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 79 (260)
T cd05067 9 KLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM------SPEAFLAEANLMKQLQHPRLVRLYAVVTQE---PIYIIT 79 (260)
T ss_pred eeeeeeccCccceEEeeecCCCceEEEEEecCCCC------cHHHHHHHHHHHHhcCCcCeeeEEEEEccC---CcEEEE
Confidence 67889999999999999988899999998764332 135789999999999999999999987543 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999999999987555567899999999999999999999988 9999999999999999999999999875332
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.....|++||......++.++||||||+++||+++ |+.||.... ..+.......+. .. ..+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~-~~---------~~~ 225 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNLERGY-RM---------PRP 225 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHHHcCC-CC---------CCC
Confidence 11235899999988889999999999999999999 999996332 223222222111 10 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+.++.+++.+||+.+|++||+++++...|+.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2334679999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=320.75 Aligned_cols=230 Identities=20% Similarity=0.264 Sum_probs=183.5
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH-HHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~-~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. +++.+|+|++....... ....+++..|.. +++.++||||+++++++...+ ..++||||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK--KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--KLYFVLDY 77 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh--hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--EEEEEEcC
Confidence 4688999999999965 68899999886533211 122344555554 567899999999999998776 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+++|+|..++.. ...+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 78 ~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (323)
T cd05575 78 VNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT 153 (323)
T ss_pred CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence 999999998853 456889999999999999999999988 9999999999999999999999999876321
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+.......+... .....+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 220 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--DTAEMYDNILNKPLR-----------LKPNIS 220 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC--CHHHHHHHHHcCCCC-----------CCCCCC
Confidence 2455789999999999999999999999999999999999633 334444444332211 112235
Q ss_pred HHHHHHHHHcccCCCCCCCCHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
.++.+++.+||+.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 6788999999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=323.16 Aligned_cols=257 Identities=19% Similarity=0.237 Sum_probs=190.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~~ 556 (772)
++.+.+|+|+||.||+|+.. ++..||+|++...... .....++.+|++++++++||||+++++++..... ...
T Consensus 3 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 3 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH---VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred EEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc---chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 56778899999999999954 6889999987643211 1223568899999999999999999998865321 246
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||++ ++|.+++. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 80 YVVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 99999995 68988875 3346899999999999999999999998 9999999999999999999999999976321
Q ss_pred ------------CCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCC----
Q 004124 637 ------------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPL---- 697 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~---- 697 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+.. ....+.... +..+.
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL-GTPSPETIS 233 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh-CCCCHHHHH
Confidence 24456899999865 67899999999999999999999999643311 001111100 00000
Q ss_pred -----------ccccC---CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004124 698 -----------KDIVD---PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 698 -----------~~~~d---~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
..+.. .......+....++.+++.+||+.||++||++.|+++. ++.+..
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 00000 00000011234567899999999999999999999965 444444
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=308.51 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=195.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|..+++..+++|.+..... ..+.|.+|+.++++++|+||+++++++... ..++||
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~ 79 (260)
T cd05070 9 QLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------SPESFLEEAQIMKKLRHDKLVQLYAVVSEE---PIYIVT 79 (260)
T ss_pred hhhheeccccCceEEEEEecCCceeEEEEecCCCC------CHHHHHHHHHHHHhcCCCceEEEEeEECCC---CcEEEE
Confidence 56788999999999999988888899998764332 134689999999999999999999988543 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++......+++..+..++.+++.||+|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 9999999999997555566899999999999999999999988 99999999999999999999999998753221
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|+|||...+..++.++||||||+++|||++ |+.||...+ ..+.......+. .. ..+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~-~~---------~~~ 225 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVLEQVERGY-RM---------PCP 225 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCC-CC---------CCC
Confidence 1235899999988889999999999999999999 888985432 223333222211 10 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+.++.+++.+||..+|++|||++++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 3345678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=321.58 Aligned_cols=232 Identities=18% Similarity=0.281 Sum_probs=184.3
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. +++.+|+|.+....... ....+.+.+|+.++.++ +|||||++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E~ 77 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIEY 77 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc--hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--EEEEEEeC
Confidence 4688999999999965 57889999887543222 22345678899888877 8999999999998876 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++. ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~ 153 (329)
T cd05618 78 VNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 153 (329)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence 99999988874 3356899999999999999999999988 999999999999999999999999987642
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC------CCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------GSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~------~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||.... .....+.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~ 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------C
Confidence 124567899999999999999999999999999999999995211 1222233222221110 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++.....++.+++.+||+.||++||++
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 223345678899999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=311.75 Aligned_cols=242 Identities=21% Similarity=0.349 Sum_probs=195.2
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++.+++|+|+||.||+|+..++..+++|++..... ..++|.+|++++++++||||+++++++.+. ..++|
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv 78 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIV 78 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------CHHHHHHHHHHHHhCCCCCcceEEEEECCC---CcEEE
Confidence 467888999999999999987777899988764221 135789999999999999999999987543 35899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++....
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999997544456899999999999999999999988 99999999999999999999999998753221
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
+...|++||......++.++|||||||++|||+| |+.||.... ..+.......+ ... ..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~--~~~~~~~~~~~-~~~---------~~ 224 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVERG-YRM---------PC 224 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--hHHHHHHHhcC-CCC---------CC
Confidence 1235899999988889999999999999999999 888885332 12222222111 110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
....+..+.+++.+||+.+|++||++.++.+.|++.
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 234556788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=335.39 Aligned_cols=243 Identities=20% Similarity=0.332 Sum_probs=196.9
Q ss_pred cccccCccceEEEEEEEE-cCCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 482 IIGSFSDGTVGTVYKGTL-SSGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~-~~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
..+.+|.|+||+||||.| ..|+ +||+|++..... .....+|.+|+-+|.+++|||+++++|+|..+. .
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~----~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~ 772 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS----PKASIELLDEALRMASLDHPNLLRLLGVCMLST---L 772 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCC----chhhHHHHHHHHHHhcCCCchHHHHhhhcccch---H
Confidence 356789999999999985 3443 466666654332 333468999999999999999999999998765 5
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
.||++|||.|+|.+|++. .+..+.-...+.|..|||+||.|||++. +|||||..+|||+.+-..+||.|||+++...
T Consensus 773 qlvtq~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHHhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 799999999999999974 4566888889999999999999999887 9999999999999999999999999988654
Q ss_pred CCC-----------ccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 AAK-----------TGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 ~~~-----------~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
... ..|+|-|.+....|+.++|||||||++||++| |..||+. ....+......++++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g--i~~~eI~dlle~geR--------- 918 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG--IPAEEIPDLLEKGER--------- 918 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC--CCHHHhhHHHhcccc---------
Confidence 322 24567788899999999999999999999999 9999953 333333222222221
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..-++.+..+++.+|.+||..|++.||+|+++...+.++..
T Consensus 919 -LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 919 -LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 12345677889999999999999999999999998887654
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=306.96 Aligned_cols=240 Identities=22% Similarity=0.369 Sum_probs=194.2
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|....+..+++|.+.... ...+.|.+|++++++++|+|++++++++... ..++||
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 79 (260)
T cd05069 9 RLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT------MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE---PIYIVT 79 (260)
T ss_pred eeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC------ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC---CcEEEE
Confidence 5677899999999999998877789998765332 1235788999999999999999999988543 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.++++......++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 9999999999997555556899999999999999999999988 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
....|++||...+..++.++|||||||++|||+| |+.||.... ..+.......+ ... ..+
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-~~~---------~~~ 225 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQVERG-YRM---------PCP 225 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC-CCC---------CCC
Confidence 1235899999988899999999999999999999 899986432 22222222211 110 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+..+.+++.+||+.+|++||++++|.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 3345778999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=316.32 Aligned_cols=247 Identities=17% Similarity=0.239 Sum_probs=188.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||+||+|+.. ++..||+|.+...... .....+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 81 (288)
T cd07871 8 VKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKNLKHANIVTLHDIIHTER--CLTLV 81 (288)
T ss_pred eEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC----CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEE
Confidence 66788999999999999865 6788999988643321 12346789999999999999999999998766 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ |+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 82 ~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 82 FEYLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred EeCCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 99997 599888853 2345789999999999999999999988 9999999999999999999999999875422
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCc----------
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLK---------- 698 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~---------- 698 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ ..+......... .+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST--VKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHHhhccccch
Confidence 23456899998754 568999999999999999999999996432 222222211110 0000
Q ss_pred ---cccCCccc-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 ---DIVDPTLK-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ---~~~d~~l~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+... ........+..+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 001123467889999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=336.49 Aligned_cols=239 Identities=17% Similarity=0.272 Sum_probs=193.4
Q ss_pred cccccccCccceEEEEEEEEc-C-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-S-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+.+...+|+|+||.||+|... + +..|++|.+.... ......+.+|+++++.++|||||++++++...+ ..+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~ 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--KLL 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--EEE
Confidence 467778899999999999854 3 5667777654332 223356788999999999999999999998877 789
Q ss_pred EEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 558 MVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
+||||+++|+|.++++.. ....+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 999999999999988643 3446889999999999999999999988 999999999999999999999999998642
Q ss_pred C-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 T-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+...
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~--~~~~~~~~~~~~~~~-------- 289 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP--SQREIMQQVLYGKYD-------- 289 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC--------
Confidence 2 2456799999999899999999999999999999999999532 334444444333211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+...+.++.+++.+||+.||++||++.+++.
T Consensus 290 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 --PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112234467899999999999999999999874
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=318.70 Aligned_cols=237 Identities=18% Similarity=0.284 Sum_probs=188.2
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. +++.+|+|.+....... ....+.+.+|..++.++ +||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--~~~lv~e~ 77 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND--DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--RLFFVIEF 77 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--EEEEEEeC
Confidence 4678999999999965 67889999887543221 22345688999999998 7999999999998876 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 153 (329)
T cd05588 78 VSGGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT 153 (329)
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence 999999988753 356899999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC------CCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------GSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~------~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||+..+ ....++.......... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------C
Confidence 124557999999999999999999999999999999999996321 1222333222222110 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCC------HHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPS------MRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs------~~evl~ 739 (772)
.+...+.++.+++.+||+.||++||+ +.|+++
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 12234567889999999999999997 566653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=318.89 Aligned_cols=241 Identities=19% Similarity=0.303 Sum_probs=190.2
Q ss_pred ccccccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+++. .+++.+|+|++....... .....+.+.+|++++.++ +|+||+++++++...+ .
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~ 79 (332)
T cd05614 3 ELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ-KAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA--K 79 (332)
T ss_pred eEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh-hhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--E
Confidence 5678899999999999975 357889999886432211 122345688999999999 5999999999988776 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 7999999999999999853 356889999999999999999999988 999999999999999999999999987632
Q ss_pred ----------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccC
Q 004124 636 ----------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ----------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+. .++.++|||||||++|||+||+.||..... ..............+
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------ 229 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP------ 229 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC------
Confidence 1245679999998765 478999999999999999999999964322 222222222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.+.....++.+++.+||+.||++|| +++++++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 230 -----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1123446788999999999999999 6777765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=316.35 Aligned_cols=233 Identities=19% Similarity=0.260 Sum_probs=185.2
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. +++.+|+|.+....... ....+.+..|..++... +||||+++++++.+.+ ..++||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ey 77 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--NLFFVMEY 77 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--cchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 5789999999999965 56789999886542111 12234566778888764 9999999999998877 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05619 78 LNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT 153 (316)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence 999999998853 346889999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+........... ++....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 220 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH--DEEELFQSIRMDNPC-----------YPRWLT 220 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC-----------CCccCC
Confidence 12455799999999889999999999999999999999999643 233333332222111 112234
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMR-GIA 738 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~-evl 738 (772)
.++.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHHH
Confidence 6788999999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=316.16 Aligned_cols=233 Identities=20% Similarity=0.284 Sum_probs=183.7
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. +++.||+|.+....... ....+.+..|.+++... +||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--~~~lv~e~ 77 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE--DDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--HLFFVMEY 77 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 4788999999999965 57789999886532211 22234556677777654 8999999999998776 68999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~ 153 (316)
T cd05592 78 LNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153 (316)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence 999999988853 346889999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||...+ ..+........... ++....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~--~~~~~~~i~~~~~~-----------~~~~~~ 220 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED--EDELFDSILNDRPH-----------FPRWIS 220 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCCC-----------CCCCCC
Confidence 124567999999998899999999999999999999999996432 23333333222111 122344
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMR-GIA 738 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~-evl 738 (772)
.++.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 6778899999999999999875 453
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=317.38 Aligned_cols=233 Identities=16% Similarity=0.233 Sum_probs=186.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC-cccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK-NFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp-NIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.+|+|++...... .....+.+..|++++..++|+ +|+++++++...+ ..++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~l 78 (324)
T cd05587 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 78 (324)
T ss_pred eEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC--EEEE
Confidence 56788999999999999965 5678999988643221 122345688899999999764 5888888888766 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 v~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 79 VMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999988853 346889999999999999999999988 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+........... ++
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--~~~~~~~i~~~~~~-----------~~ 221 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELFQSIMEHNVS-----------YP 221 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCCC-----------CC
Confidence 124567999999999999999999999999999999999996432 23333333322111 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.....++.+++.+||+.||++|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 2345678899999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=315.11 Aligned_cols=248 Identities=26% Similarity=0.443 Sum_probs=193.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcE--EEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVE--IAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~--vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|... ++.. +++|...... .......|.+|++++.++ +||||+++++++...+ ..
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~--~~ 83 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 83 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC----CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC--Cc
Confidence 56678899999999999964 3443 4555543211 123456789999999999 8999999999998876 57
Q ss_pred EEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
++||||+++|+|.++++... ...+++..++.++.|++.|++|||+.+ |+||||||+|||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~~ 161 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 161 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCCC
Confidence 99999999999999986432 135789999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCCC--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004124 623 AAKISDFSFWNNTTA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 623 ~~kLsDFGla~~~~~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
.+||+|||+++.... ....|+|||......++.++|||||||++|||+| |..||.... ..+.......+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~ 239 (303)
T cd05088 162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CAELYEKLPQG 239 (303)
T ss_pred cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC--hHHHHHHHhcC
Confidence 999999998753211 1235899999988889999999999999999998 999985322 22222222111
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
... ..+...+.++.+++.+||+.+|++||++.++++.|+++....
T Consensus 240 -~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 240 -YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred -CcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 011223457889999999999999999999999998875543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=316.16 Aligned_cols=234 Identities=18% Similarity=0.268 Sum_probs=188.8
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. ++..+|+|.+....... ......+..|++++..+ +||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 77 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ--DDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--RLFFVMEY 77 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh--hhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEcC
Confidence 4788999999999965 57789999886532211 22345677889999888 7999999999998876 68999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (318)
T cd05570 78 VNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT 153 (318)
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence 999999988753 346899999999999999999999988 999999999999999999999999987532
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +.............. ++...+
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 220 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD--DEDELFQSILEDEVR-----------YPRWLS 220 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC--CHHHHHHHHHcCCCC-----------CCCcCC
Confidence 12455789999999999999999999999999999999999633 233333333322111 122345
Q ss_pred HHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSM-----RGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~-----~evl~ 739 (772)
.++.+++.+||+.||++||++ .++++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 678899999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=305.39 Aligned_cols=238 Identities=25% Similarity=0.379 Sum_probs=191.4
Q ss_pred ccCccceEEEEEEEEcC--C--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 485 SFSDGTVGTVYKGTLSS--G--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~--~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+|+|+||.||+|.+.. + ..+++|.+...... ...+.|.+|++++++++||||+++++++.. . ..++||
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~~~v~ 74 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS----DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--PLMMVT 74 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH----HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--eEEEEE
Confidence 46789999999998753 2 35888887654321 445789999999999999999999999887 4 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.......++|.....++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9999999999987543356899999999999999999999988 99999999999999999999999998764322
Q ss_pred ---------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ---------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
+...|++||.+....++.++|||||||++|||+| |+.||... +..+........... . .
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~---~------~ 221 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL--SGSQILKKIDKEGER---L------E 221 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHhcCCc---C------C
Confidence 2346899999988899999999999999999999 99998533 222333222211110 0 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11234567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=325.70 Aligned_cols=242 Identities=18% Similarity=0.256 Sum_probs=190.8
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++. .+++.+|+|++...... .....+.+.+|++++.+++|||||++++++.+.+ ..++|
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv 79 (377)
T cd05629 4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF--KKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ--YLYLI 79 (377)
T ss_pred eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH--HhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eeEEE
Confidence 5678899999999999985 46889999988643211 1233467889999999999999999999998877 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 80 MEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999853 356888889999999999999999998 999999999999999999999999987521
Q ss_pred ----------------------------------------------------CCCCccccchhhhccCCCCCCCchHHHH
Q 004124 636 ----------------------------------------------------TAAKTGSAAMELLETSAVDLESNVYSFG 663 (772)
Q Consensus 636 ----------------------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfG 663 (772)
..++..|+|||.+.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 1255679999999988999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 004124 664 TILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR---PSMRGIAAK 740 (772)
Q Consensus 664 vvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R---Ps~~evl~~ 740 (772)
|++|||+||+.||.... ..+............. . +. ......++.+++.+|+. +|.+| +++.|+++.
T Consensus 236 vil~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~-~--p~----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 236 AIMFECLIGWPPFCSEN--SHETYRKIINWRETLY-F--PD----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhhhcCCCCCCCCC--HHHHHHHHHccCCccC-C--CC----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999999996433 2222222222111110 0 10 01234678889999997 66665 599998864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=307.56 Aligned_cols=246 Identities=21% Similarity=0.362 Sum_probs=191.2
Q ss_pred cccccCccceEEEEEEEEcCCc---EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC----Cc
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGV---EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~---~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~----~~ 554 (772)
+.+.+|+|+||.||+|+..... .+|+|.+..... .....+.|.+|++++++++|+||+++++++.... ..
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC---TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3456789999999999976433 578887654321 1233567899999999999999999999885422 12
Q ss_pred eEEEEEeccCCCChhhhhhhh----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~----~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
..++||||+++|+|.+++... ....+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCCCCEEECCCC
Confidence 468999999999999887432 2345899999999999999999999987 9999999999999999999999999
Q ss_pred CccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 631 FWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 631 la~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
+++.... ....|++||......++.++|||||||++|||++ |+.||... ...+.......+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~-~- 233 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV--ENSEIYDYLRQGNR-L- 233 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCC-C-
Confidence 9764321 2235789999988889999999999999999999 78888532 22233332222211 1
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+...+..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 234 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 --------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01123446788999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=309.32 Aligned_cols=242 Identities=23% Similarity=0.350 Sum_probs=191.9
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|+|+||.||+|.+.. +..+++|...... .......|.+|+.++++++|+||+++++++.+.+
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 82 (277)
T cd05036 9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC----SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-- 82 (277)
T ss_pred EeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--
Confidence 567888999999999999753 4667777664322 1233467999999999999999999999988776
Q ss_pred eEEEEEeccCCCChhhhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~-----~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kL 626 (772)
..++||||+++|+|.++++.... ..++|..+++++.||+.||+|||+.+ ++||||||+||+++.++ .+||
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceEe
Confidence 46899999999999999865421 35899999999999999999999988 99999999999998654 6999
Q ss_pred ccccCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++..... ...|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+.........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~--~~~~~~~~~~~~ 238 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT--NQEVMEFVTGGG 238 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCC
Confidence 999998754211 135899999988899999999999999999997 999986332 223332222211
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
. . ..+...+.++.+++.+||+.+|++||++.+|++.|+
T Consensus 239 ~-~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 R-L---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred c-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1 0 112234567889999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=320.87 Aligned_cols=231 Identities=19% Similarity=0.286 Sum_probs=187.1
Q ss_pred cccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 484 GSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.+|+|+||.||+++. .++..+|+|++...... ......+.+|++++++++||||+++++++...+ ..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK---VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--KLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh---hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--EEEEE
Confidence 4678999999999875 35788999988653321 223356788999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 77 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 77 LDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 999999999999853 356899999999999999999999988 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+....++.++|||||||++|||+||+.||... +..+........... .+.
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~--~~~~~~~~i~~~~~~-----------~p~ 219 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK--DRKETMTMILKAKLG-----------MPQ 219 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC--CHHHHHHHHHcCCCC-----------CCC
Confidence 2345789999998888999999999999999999999999643 223333333322111 122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRG 736 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~e 736 (772)
....++.+++.+||+.||++||++.+
T Consensus 220 ~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 220 FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 34467889999999999999999555
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=315.22 Aligned_cols=233 Identities=18% Similarity=0.251 Sum_probs=185.4
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. ++..+|+|.+....... ....+.+..|.+++... +||||+++++++...+ ..++||||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E~ 77 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI--DDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--HLFFVMEF 77 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--cchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--EEEEEECC
Confidence 4788999999999965 57889999886532211 12234567788888754 8999999999998876 78999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (316)
T cd05620 78 LNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153 (316)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence 999999988853 356889999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||...+ ..+........... .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--~~~~~~~~~~~~~~-----------~~~~~~ 220 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--EDELFESIRVDTPH-----------YPRWIT 220 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCC-----------CCCCCC
Confidence 124567999999999999999999999999999999999996432 23333332222111 112234
Q ss_pred HHHHHHHHHcccCCCCCCCCHH-HHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMR-GIA 738 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~-evl 738 (772)
.++.+++.+||+.||++||++. ++.
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 6788999999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=307.22 Aligned_cols=247 Identities=22% Similarity=0.345 Sum_probs=197.9
Q ss_pred ccccccCccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||.||+|.... +..|++|++.... .....+.+.+|+.++++++|+||+++++++...+. .
T Consensus 9 ~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~ 83 (280)
T cd05043 9 TLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA----SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE-P 83 (280)
T ss_pred EEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-C
Confidence 456778899999999999765 6778888765321 23345678999999999999999999999876432 5
Q ss_pred EEEEEeccCCCChhhhhhhhcc------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEA------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
.++++||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCCCcEEECCC
Confidence 6899999999999999864321 46899999999999999999999988 999999999999999999999999
Q ss_pred cCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 630 SFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+++.... +...|+|||.+....++.++|||||||++||+++ |+.||... +..++......+ ...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~-~~~ 238 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI--DPFEMAAYLKDG-YRL 238 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC--CHHHHHHHHHcC-CCC
Confidence 99874321 2335899999988889999999999999999999 99999643 223333322222 111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. ....+++++.+++.+||..+|++|||+.|+++.|+++.+
T Consensus 239 ~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 239 A---------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C---------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 011234678899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=323.80 Aligned_cols=242 Identities=21% Similarity=0.335 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||+|++...... .......+.+|++++..++||||+++++++.+.+ ..++|
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 79 (350)
T cd05573 4 EVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI--KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE--HLYLV 79 (350)
T ss_pred eEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh--hccHHHHHHHHHHHHHhcCCCCccchhhheecCC--eEEEE
Confidence 56788999999999999965 6889999988653221 1233467899999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 80 MEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 9999999999998643 56899999999999999999999988 9999999999999999999999999875322
Q ss_pred -----------------------------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC
Q 004124 637 -----------------------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681 (772)
Q Consensus 637 -----------------------------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~ 681 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~- 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT- 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-
Confidence 23457899999999999999999999999999999999996443
Q ss_pred CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 004124 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS-MRGIAAK 740 (772)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-~~evl~~ 740 (772)
..+............. -+. ....++++.+++.+|+. ||++||+ +.|+++.
T Consensus 235 -~~~~~~~i~~~~~~~~---~p~----~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 -LQETYNKIINWKESLR---FPP----DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -HHHHHHHHhccCCccc---CCC----CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 2222222222111100 010 01145678899999997 9999999 9999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=306.81 Aligned_cols=241 Identities=27% Similarity=0.460 Sum_probs=189.1
Q ss_pred ccCccceEEEEEEEEcC-Cc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEE
Q 004124 485 SFSDGTVGTVYKGTLSS-GV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~-~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+|+|+||.||+|+..+ +. .+++|...... .....+.+.+|++++.++ +||||+++++++...+ ..++||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv~ 75 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLAI 75 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC----CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--CceEEE
Confidence 46789999999999754 33 35666654221 123346789999999999 8999999999998876 569999
Q ss_pred eccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 561 EYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
||+++|+|.++++... ...+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCCCeEEE
Confidence 9999999999986432 124789999999999999999999987 999999999999999999999
Q ss_pred ccccCccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 627 SDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 627 sDFGla~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
+|||+++... .....|+|||.+....++.++|||||||++|||+| |+.||... +..+.......+. ..
T Consensus 154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~--~~~~~~~~~~~~~-~~ 230 (270)
T cd05047 154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQGY-RL 230 (270)
T ss_pred CCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc--CHHHHHHHHhCCC-CC
Confidence 9999975221 11235899999988889999999999999999997 99998532 2233332222211 10
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
..+.....++.+++.+||+.+|.+||++.|+++.|+++.
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 ---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111234467889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=314.76 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=195.6
Q ss_pred ccccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 479 FSNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
|.++++.+|+|+||.||++++ .++..+++|.+..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc----HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 457889999999999999984 3567899998754321 2234679999999999999999999999987643
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...++||||+++|+|.+++... ...++|..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCCCCEEECCCcccc
Confidence 3579999999999999998533 346899999999999999999999988 9999999999999999999999999876
Q ss_pred CCCC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-------------CHHHHHH
Q 004124 634 NTTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-------------SLENWAS 688 (772)
Q Consensus 634 ~~~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-------------~~~~~~~ 688 (772)
.... +...|+|||...+..++.++|||||||++|||+|++.|...... ....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 4321 22358899998888899999999999999999998766432110 0111111
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
. ..... ....+..++.++.+++.+||+.+|++||++.|+++.|+++
T Consensus 238 ~-~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 V-LEEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred H-HHcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1 11100 0111223557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=306.47 Aligned_cols=243 Identities=20% Similarity=0.326 Sum_probs=194.3
Q ss_pred ccccccCccceEEEEEEEEcC-C---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+....+|+|+||.||+|+... + ..+++|++..... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 81 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT----EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--PA 81 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC----HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC--Cc
Confidence 345678899999999999753 3 2688887754321 223467899999999999999999999998776 57
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 82 MIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999998642 356899999999999999999999988 9999999999999999999999999876332
Q ss_pred CC------------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 AA------------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~~------------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ...|++||.+....++.++|||||||++|||+| |+.||.... ..++......+ ...
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--~~~~~~~i~~~-~~~------ 229 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--NHEVMKAINDG-FRL------ 229 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--HHHHHHHHhcC-CCC------
Confidence 11 124899999988889999999999999999998 999995432 23333333221 111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
......+.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 230 ---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 ---PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11123456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=303.02 Aligned_cols=240 Identities=20% Similarity=0.316 Sum_probs=196.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|++|.||+|+.. ++..+++|.+...... ......+.+|++++++++||||+++++++...+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 77 (256)
T cd08529 3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN---RREREEAIDEARVLAKLDSSYIIRYYESFLDKG--KLNIV 77 (256)
T ss_pred eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC---HHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--EEEEE
Confidence 34567889999999999965 6788999987643322 334567999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++++|.++++......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999999997654567899999999999999999999987 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||...+..++.++|||||||++|||+||+.||.... ..........+.. .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~----------~~~~~ 223 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--QGALILKIIRGVF----------PPVSQ 223 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCC----------CCCcc
Confidence 23456899999998889999999999999999999999996433 2232333322211 11222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 44567899999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=315.00 Aligned_cols=248 Identities=18% Similarity=0.255 Sum_probs=187.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+|+|++...... .....+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 81 (303)
T cd07869 8 EKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE----GTPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTLV 81 (303)
T ss_pred eEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc----ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--eEEEE
Confidence 67889999999999999975 6788999988644321 12245778999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ ++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 82 ~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 82 FEYVH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred EECCC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 99995 688888753 3356888899999999999999999988 9999999999999999999999999875321
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcc---------
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKD--------- 699 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~--------- 699 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||..... ..+........ ..+...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-IQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhCCCChhhccchhhcc
Confidence 23456899998754 4588999999999999999999999964322 22222221110 000000
Q ss_pred ccCCc-cc-----cccH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 IVDPT-LK-----SFQE-----NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~-l~-----~~~~-----~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++. .. .... ....++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 00 0000 12356789999999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=302.18 Aligned_cols=237 Identities=24% Similarity=0.409 Sum_probs=191.6
Q ss_pred ccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 485 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
.+|.|+||.||+|...++..+++|....... ......|.+|++++++++||||+++++++...+ ..++||||++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP----QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--PIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--ccEEEEECCC
Confidence 4678999999999988888999998754321 233457899999999999999999999998776 5699999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------- 637 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~------- 637 (772)
+|+|.+++... ...+++..+..++.|++.||.|+|+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 76 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 76 GGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence 99999988543 345899999999999999999999988 99999999999999999999999998753221
Q ss_pred ---CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|+|||...+..++.++||||||+++||+++ |..||... ...........+.. . ..+..++
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~--~~~~~~~~~~~~~~-~---------~~~~~~~ 220 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM--TNQQAREQVEKGYR-M---------SCPQKCP 220 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHHcCCC-C---------CCCCCCC
Confidence 1235899999988899999999999999999999 99998533 22222222222111 0 1122345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.++.+++.+||+.+|++||++.|+++.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 67899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=304.32 Aligned_cols=238 Identities=23% Similarity=0.375 Sum_probs=190.8
Q ss_pred ccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 485 SFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+|+|+||.||+|++.. +..+++|.+...... ...+++.+|++++++++|+|||++++++... ..++||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v~ 74 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA----AGKKEFLREASVMAQLDHPCIVRLIGVCKGE---PLMLVM 74 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---ceEEEE
Confidence 57889999999998532 267888887644321 3456799999999999999999999988643 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC--
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA-- 638 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~-- 638 (772)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 75 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 75 ELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred EeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 999999999999643 36899999999999999999999988 999999999999999999999999987633211
Q ss_pred ----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 639 ----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 639 ----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
...|+|||......++.++|||||||++|||++ |+.||...+ ..+........ ... .
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~-~~~---------~ 218 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESG-ERL---------P 218 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcC-CcC---------C
Confidence 125899999988899999999999999999998 999996432 22332222222 111 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.+..++.++.+++.+||..+|++||++.++++.|+++.
T Consensus 219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 12234567889999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=316.13 Aligned_cols=233 Identities=16% Similarity=0.229 Sum_probs=187.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++..+|+|+||.||+|+.. ++..+|+|.+...... .....+.+..|..++..+ +|++|+++++++...+ ..++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~l 78 (323)
T cd05616 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD--RLYF 78 (323)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC--EEEE
Confidence 46778899999999999865 5678999988653221 122334577788888877 6899999999998776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 79 v~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 79 VMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999988853 356889999999999999999999988 999999999999999999999999987632
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..+........... ++
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~--~~~~~~~i~~~~~~-----------~p 221 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSIMEHNVA-----------YP 221 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCC-----------CC
Confidence 124567999999999999999999999999999999999996432 33333333322111 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.....++.+++.+|++.+|++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 3345678899999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=313.90 Aligned_cols=249 Identities=25% Similarity=0.396 Sum_probs=198.5
Q ss_pred cccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~ 550 (772)
+.+.+.+|+|+||.||+++.. ....+|+|.+.... ......++.+|++++.++ +||||+++++++..
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC----ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 367789999999999999753 22468888775321 122345688999999999 89999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 616 (772)
.+ ..++||||+++|+|.+++.... ...++|..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 96 ~~--~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Ni 171 (307)
T cd05098 96 DG--PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAARNV 171 (307)
T ss_pred CC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHHhe
Confidence 76 5799999999999999996532 135899999999999999999999988 99999999999
Q ss_pred EECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHH
Q 004124 617 YLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 684 (772)
Q Consensus 617 Lld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~ 684 (772)
++++++.+||+|||+++.... ....|+|||.+.+..++.++|||||||++|||++ |+.||.. ....
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~--~~~~ 249 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVE 249 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc--CCHH
Confidence 999999999999998764321 1236899999988889999999999999999998 8888853 2333
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+.......+ .. ...+.....++.+++.+||+.+|++||++.||++.|+++.+..
T Consensus 250 ~~~~~~~~~-~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 250 ELFKLLKEG-HR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHHcC-CC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 333332221 11 0122334568889999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=316.89 Aligned_cols=230 Identities=19% Similarity=0.252 Sum_probs=182.3
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH-HHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~-~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||.||+|+.. ++..+|+|.+....... ......+.+|.. +++.++|||||++++++.+.+ ..++||||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 77 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK--KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--KLYFVLDY 77 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH--hhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--EEEEEEcC
Confidence 4788999999999975 57889999886543211 222344555554 678899999999999998776 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+.......++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (321)
T cd05603 78 VNGGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT 153 (321)
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence 999999888753 356788888899999999999999988 999999999999999999999999987642
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +.............. .+....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 220 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR--DVSQMYDNILHKPLQ-----------LPGGKT 220 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC--CHHHHHHHHhcCCCC-----------CCCCCC
Confidence 12345799999998889999999999999999999999999643 333333333322111 122334
Q ss_pred HHHHHHHHHcccCCCCCCCCHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
.++.+++.+||+.||++||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCC
Confidence 6788999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=320.37 Aligned_cols=235 Identities=17% Similarity=0.246 Sum_probs=185.6
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH-HHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~-~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. +++.+|+|++..+.... ......+..|.. +++.++||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN--RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--KLYFVLDF 77 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--EEEEEEcC
Confidence 4688999999999864 68899999886543211 222345556654 567899999999999998877 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+++|+|..++. ....+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 78 ~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 153 (325)
T cd05604 78 VNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT 153 (325)
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence 99999998875 3456899999999999999999999988 9999999999999999999999999876421
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+........... + .+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--~~~~~~~~~~~~~~~----~-------~~~~~ 220 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR--DVAEMYDNILHKPLV----L-------RPGAS 220 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC--CHHHHHHHHHcCCcc----C-------CCCCC
Confidence 2455799999999999999999999999999999999999643 333333333332111 1 11234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.+++.+|++.+|++||++++.++.
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 567889999999999999988654433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=310.56 Aligned_cols=246 Identities=23% Similarity=0.377 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++...+|+|+||.||+|+... ...+++|.+..... .....++.+|++++++++||||+++++.+...+
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 76 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS----SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG-- 76 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC----HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--
Confidence 456778899999999998532 24577776643221 223467999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhh----------------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ----------------------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~----------------------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++|+||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+|||||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dik 154 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLA 154 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhh
Confidence 569999999999999987532 1135789999999999999999999988 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||+++++.+||+|||+++... .....|+|||...+..++.++||||||+++|||+| |+.||...
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~- 233 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI- 233 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC-
Confidence 999999999999999999976421 12346899999888889999999999999999999 99998532
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...++....... ... ..+...+.++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 234 -~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 234 -APERLFNLLKTG-YRM---------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -CHHHHHHHHhCC-CCC---------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 233332222111 100 0112344678899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=311.78 Aligned_cols=245 Identities=24% Similarity=0.399 Sum_probs=195.3
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
+++..+|+|+||.||++.... ...+++|.+..... .....++.+|++++.++ +|+||+++++++...+
T Consensus 15 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 89 (293)
T cd05053 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG- 89 (293)
T ss_pred EEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC-
Confidence 567788999999999998642 35788887754321 22345688999999999 8999999999998876
Q ss_pred ceEEEEEeccCCCChhhhhhhh--------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQ--------------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~--------------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld 619 (772)
..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++
T Consensus 90 -~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 -PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVLVT 166 (293)
T ss_pred -CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEEEc
Confidence 569999999999999998642 2346899999999999999999999987 99999999999999
Q ss_pred CCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHH
Q 004124 620 EDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687 (772)
Q Consensus 620 ~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~ 687 (772)
+++.+||+|||+++.... ....|+|||......++.++|||||||++|||++ |..||... ...+..
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~ 244 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI--PVEELF 244 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC--CHHHHH
Confidence 999999999998764321 1235899999988899999999999999999998 88888532 222322
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.....+ ... ..+.....++.+++.+||..+|++|||+.|+++.|+++.
T Consensus 245 ~~~~~~-~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 KLLKEG-YRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHcC-CcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 222221 110 112234567889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=312.20 Aligned_cols=248 Identities=23% Similarity=0.402 Sum_probs=197.6
Q ss_pred ccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
.+...+|+|+||.||+|+.. ++..+++|...... .....+++.+|+.+++.+ +||||+++++++...
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 18 TLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred eecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc----chHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 56788899999999999742 23468888765321 123346789999999999 899999999999877
Q ss_pred CCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
. ..++||||+++|+|.+++.... ...++|..+..++.||+.||+|||+.+ |+||||||+||+
T Consensus 94 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Nil 169 (304)
T cd05101 94 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAARNVL 169 (304)
T ss_pred C--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeecccccceEE
Confidence 6 5799999999999999986532 135788999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
+++++.+||+|||+++.... ....|+|||.+.+..++.++||||||+++|||+| |..||.. ....+
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~--~~~~~ 247 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVEE 247 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc--CCHHH
Confidence 99999999999998764321 1235899999988889999999999999999999 7788743 23444
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+......+. .. ..+..++.++.+++.+||+.+|++||++.|+++.|+++....
T Consensus 248 ~~~~~~~~~-~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 248 LFKLLKEGH-RM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred HHHHHHcCC-cC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 443332221 11 112244577889999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=304.38 Aligned_cols=242 Identities=19% Similarity=0.248 Sum_probs=193.4
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|++|.||+|.. .+++.+++|.+.............+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v 82 (263)
T cd06625 5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE--TLSIF 82 (263)
T ss_pred cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC--eEEEE
Confidence 4567788999999999985 46889999987654332222333467899999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++++|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 83 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 83 MEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 999999999998853 345888899999999999999999988 9999999999999999999999999875321
Q ss_pred ---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|+|||...+..++.++|||||||++|||++|+.||..... ............ ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~---------~~~ 227 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--MAAIFKIATQPT---------NPQ 227 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch--HHHHHHHhccCC---------CCC
Confidence 123468999999888899999999999999999999999853321 111111111110 111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+.....++.+++.+||..+|++||++.|+++
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 22345567889999999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=313.21 Aligned_cols=245 Identities=20% Similarity=0.321 Sum_probs=194.0
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|..+ .+..+|+|.+..... ......+.+|+.++++++||||+++++++...+
T Consensus 9 ~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 82 (288)
T cd05061 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ-- 82 (288)
T ss_pred eeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--
Confidence 67788999999999999754 245788887653321 222346889999999999999999999988776
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++||||+++|+|.+++.... ....++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCCCcEEE
Confidence 5799999999999999996422 134577788999999999999999988 999999999999999999999
Q ss_pred ccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.... +...|++||.+....++.++|||||||++|||++ |+.||.. ....++......+.
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~--~~~~~~~~~~~~~~ 238 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGG 238 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCC
Confidence 99998763211 1235899999988899999999999999999999 7888853 22333333333221
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
. ...+...+.++.+++.+||+.+|++||++.|+++.|++..
T Consensus 239 ~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 239 Y----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred C----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1 1112233468999999999999999999999999888753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=319.69 Aligned_cols=242 Identities=20% Similarity=0.287 Sum_probs=192.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.. +++.+|+|++...... .....+.+.+|++++..++|+||+++++++.+.+ ..++|
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~--~~~lv 79 (330)
T cd05601 4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL--AQETVSFFEEERDILSISNSPWIPQLQYAFQDKD--NLYLV 79 (330)
T ss_pred eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--eEEEE
Confidence 56788899999999999864 6788999988754321 1234567889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++... ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999998643 356899999999999999999999988 9999999999999999999999999875432
Q ss_pred -------CCCccccchhhhc------cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 -------AAKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 -------~~~~~~~aPE~~~------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||... ................ .. +
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~--~~~~~~~~i~~~~~~~-~~--~ 231 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG--TSAKTYNNIMNFQRFL-KF--P 231 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC--CHHHHHHHHHcCCCcc-CC--C
Confidence 2455799999985 456889999999999999999999999643 2233333333221111 00 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++..|+. +|++||++.++++
T Consensus 232 ----~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 232 ----EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ----CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 011245678889999997 9999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=309.17 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=197.1
Q ss_pred ccccccCccceEEEEEEEEc-----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||.||+|++. .+..+|||.+...... ...+.|.+|++++++++||||+++++++...+...
T Consensus 7 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 7 KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE----QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch----HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 56688899999999999864 3678999988644321 24568999999999999999999999998744446
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 79999999999999998643 335899999999999999999999988 999999999999999999999999987654
Q ss_pred CC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH------------HHHHHHh
Q 004124 636 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE------------NWASEYL 691 (772)
Q Consensus 636 ~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~------------~~~~~~~ 691 (772)
.. ....|++||......++.++||||||+++|||+||+.|+........ ......+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 31 12347899999888999999999999999999999998753221110 0111111
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
..... ...+..++.++.+++.+||+.+|++||+|.||+++|+.+.
T Consensus 240 ~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGER---------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCCc---------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 11100 0112234467899999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=310.31 Aligned_cols=233 Identities=23% Similarity=0.356 Sum_probs=179.6
Q ss_pred ccCccceEEEEEEEEcC-------------------------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC
Q 004124 485 SFSDGTVGTVYKGTLSS-------------------------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~-------------------------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp 539 (772)
.+|+|+||.||+|++.. ...|++|.+.... ......|.+|++++++++||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~l~h~ 76 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-----RDIALAFFETASLMSQVSHI 76 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-----HHHHHHHHHHHHHHhcCCCC
Confidence 47899999999998521 1346677664321 22345788999999999999
Q ss_pred cccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC
Q 004124 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 540 NIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld 619 (772)
||++++|+|.... ..++||||+++|+|..++.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++
T Consensus 77 niv~~~~~~~~~~--~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~ 151 (274)
T cd05076 77 HLAFVHGVCVRGS--ENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLA 151 (274)
T ss_pred CeeeEEEEEEeCC--ceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEe
Confidence 9999999998876 67999999999999988853 3456889999999999999999999987 99999999999997
Q ss_pred CCC-------cEEEccccCccCC-----CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHH-cCCCcccCCCCCHHH
Q 004124 620 EDY-------AAKISDFSFWNNT-----TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMI-TGRISYSIENGSLEN 685 (772)
Q Consensus 620 ~~~-------~~kLsDFGla~~~-----~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELl-tG~~P~~~~~~~~~~ 685 (772)
+.+ .+|++|||++... ..+...|+|||.+.. ..++.++|||||||++||++ +|+.||.........
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 231 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE 231 (274)
T ss_pred ccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 643 4899999986432 223457899998864 56899999999999999995 699998643221111
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
......... ++....++.++|.+||+.+|++||+|.+|++.|
T Consensus 232 ---~~~~~~~~~-----------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 232 ---RFYEKKHRL-----------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ---HHHHhccCC-----------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 111111111 111234688999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=307.46 Aligned_cols=246 Identities=18% Similarity=0.317 Sum_probs=193.8
Q ss_pred ccccccCccceEEEEEEEEc-CCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++..+|.|+||+||+|++. ++. .||+|.+.... .....+++.+|+.++..++||||+++++++... .
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~ 82 (279)
T cd05109 10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT----SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---T 82 (279)
T ss_pred eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC----CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---C
Confidence 56788899999999999853 444 36788765332 233456789999999999999999999999764 3
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++++||+++|+|.++++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCcEEECCCCceeec
Confidence 57999999999999998642 346899999999999999999999988 999999999999999999999999987643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ....|++||...+..++.++|||||||++|||+| |..||..... ..... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~-~~~~~~~~~----- 231 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPD-LLEKGERLP----- 231 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH-HHHCCCcCC-----
Confidence 21 1235899999988899999999999999999999 8999853321 11111 111111110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.+...+.++.+++.+||+.||++||++.|+++.|+.+....
T Consensus 232 ----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 ----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11234567889999999999999999999999998875543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=308.31 Aligned_cols=242 Identities=21% Similarity=0.372 Sum_probs=192.3
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+++|+|+||.||+++.. ++..+++|...... ......|.+|++++++++|+||+++++++...+
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 80 (280)
T cd05092 8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR-- 80 (280)
T ss_pred eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC--
Confidence 45678999999999999742 34567777765332 234567999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhcc-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA-------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~-------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
..++||||+++|+|.++++.... ..+++..++.++.|++.|++|||+.+ |+||||||+|||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~ 158 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQG 158 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCC
Confidence 56999999999999999864321 35889999999999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHH
Q 004124 622 YAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689 (772)
Q Consensus 622 ~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~ 689 (772)
+.+||+|||+++.... ....|+|||...+..++.++|||||||++|||++ |+.||.... ..+....
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~ 236 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS--NTEAIEC 236 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC--HHHHHHH
Confidence 9999999998753311 1235899999988899999999999999999999 899985322 2222222
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+... ..+..++..+.+++.+||+.||++||+++||.+.|++
T Consensus 237 ~~~~~~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 237 ITQGREL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHcCccC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 2222111 0112344678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=309.73 Aligned_cols=243 Identities=23% Similarity=0.363 Sum_probs=194.6
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|.|+||.||+|+.. ++..+++|.+.... .....++|.+|++++++++||||+++++++...+
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 66788999999999999864 45778888775432 1234467999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~ 159 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATR 159 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHh
Confidence 5699999999999999986321 124788899999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCC
Q 004124 615 SIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS 682 (772)
Q Consensus 615 NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~ 682 (772)
||++++++.+||+|||+++.... ....|+|||...+..++.++|||||||++|||++ |..||.. ..
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~--~~ 237 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG--MA 237 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC--CC
Confidence 99999999999999998753211 1235899999988899999999999999999998 8888842 23
Q ss_pred HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 683 LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
..++......+.. ...++..+.++.+++.+||+.+|++||++.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 HEEVIYYVRDGNV----------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHHhcCCC----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 3344333322211 11123345778999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=326.39 Aligned_cols=242 Identities=20% Similarity=0.289 Sum_probs=198.1
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.-..+|+|+|-+||||... +|.+||--.++..... ......++|..|+.+|+.|+|||||++|.++.+.......+|+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~-q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT-QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhh-cChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3446778999999999854 5666664333222211 1233347899999999999999999999999887655678999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNNT---- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~~---- 635 (772)
|.|..|+|..|++ +.+.++......|++||++||.|||++.|||||||||.+||+|+.+ |.+||+|.|+|...
T Consensus 123 EL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 9999999999985 4567888999999999999999999999999999999999999865 99999999998643
Q ss_pred ---CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC--ccccCCccccccH
Q 004124 636 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL--KDIVDPTLKSFQE 710 (772)
Q Consensus 636 ---~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~l~~~~~ 710 (772)
..|++.+||||.+. ..|++..||||||++|+||+|+..||. +-.+..+..+++..|..|- ..+-
T Consensus 201 aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs-EC~n~AQIYKKV~SGiKP~sl~kV~--------- 269 (632)
T KOG0584|consen 201 AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS-ECTNPAQIYKKVTSGIKPAALSKVK--------- 269 (632)
T ss_pred cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh-hhCCHHHHHHHHHcCCCHHHhhccC---------
Confidence 34778899999987 889999999999999999999999996 5556777777777765431 1222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+++.++|.+|+.. .++|||+.|+++.
T Consensus 270 --dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 --DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 25788999999999 9999999999864
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=312.07 Aligned_cols=250 Identities=24% Similarity=0.328 Sum_probs=189.9
Q ss_pred ccccccCccceEEEEEEEEcC---------------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCccccee
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS---------------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 545 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~---------------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~ 545 (772)
++.+.+|+|+||.||+++... ...+|+|.+.... .......|.+|++++++++|+||++++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 8 RLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred eehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 567889999999999987542 2347888775432 123346799999999999999999999
Q ss_pred EEEEcCCCceEEEEEeccCCCChhhhhhhhc----------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCC
Q 004124 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE----------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 615 (772)
Q Consensus 546 g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~----------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~N 615 (772)
+++...+ ..++||||+++++|.+++.... ...++|..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~N 159 (295)
T cd05097 84 GVCVSDD--PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATRN 159 (295)
T ss_pred EEEcCCC--ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhh
Confidence 9998776 6799999999999999985421 124788999999999999999999988 9999999999
Q ss_pred eEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc--CCCcccCCCCC
Q 004124 616 IYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENGS 682 (772)
Q Consensus 616 ILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt--G~~P~~~~~~~ 682 (772)
|++++++.+||+|||+++.... ....|+|||......++.++|||||||++|||++ |..||....
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~-- 237 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS-- 237 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--
Confidence 9999999999999998764321 1236899999988889999999999999999998 556764322
Q ss_pred HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 683 LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
..+.............. ......++..+..+.+++.+||+.+|++||++.+|++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 238 DEQVIENTGEFFRNQGR---QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred hHHHHHHHHHhhhhccc---cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 22222111110000000 00001112234689999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=324.30 Aligned_cols=246 Identities=20% Similarity=0.332 Sum_probs=194.1
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~ 553 (772)
.+.+.+|+|+||.||+|++. .+..||+|++..... ....+.+.+|+++|.++. |||||+++|+|...+
T Consensus 40 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~- 114 (401)
T cd05107 40 VLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR----SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG- 114 (401)
T ss_pred ehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC----hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC-
Confidence 45678999999999999864 345799999864322 222356899999999997 999999999998876
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++||||+++|+|.++++...
T Consensus 115 -~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 115 -PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred -CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 5799999999999999986421
Q ss_pred ---------------------------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 577 ---------------------------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 577 ---------------------------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
...++|...+.|+.|++.||+|||+.+ |+||||||+|||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~NiL 271 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNVL 271 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceEE
Confidence 124678888999999999999999887 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
+++++.+||+|||+++... .+...|+|||.+....++.++|||||||++|||++ |+.||.... ..+
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~--~~~ 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP--MNE 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC--chH
Confidence 9999999999999976421 12235899999988889999999999999999998 888985332 122
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
............ ..+..+..++.+++.+||..+|++||+++||++.|+++.
T Consensus 350 ~~~~~~~~~~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFYNAIKRGYRM---------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 222222221111 012234578899999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=315.52 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=184.0
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHH-HHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKI-DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei-~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. +++.+|+|.+....... ......+..|. .+++.++||||+++++++...+ ..++||||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--~~~lv~e~ 77 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLDY 77 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh--hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--eEEEEEeC
Confidence 4788999999999965 56789999886533211 11223444444 4578899999999999998877 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|.+++.. ...+.......++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~ 153 (325)
T cd05602 78 INGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT 153 (325)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence 999999998853 345778888889999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+........... ..+...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~-----------~~~~~~ 220 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNKPLQ-----------LKPNIT 220 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCcC-----------CCCCCC
Confidence 12456799999999999999999999999999999999999633 333333333322111 112344
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.+++.+|++.+|.+||++.+.+..
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 678899999999999999998765443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=306.82 Aligned_cols=233 Identities=23% Similarity=0.385 Sum_probs=180.0
Q ss_pred ccCccceEEEEEEEEcC-------------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC
Q 004124 485 SFSDGTVGTVYKGTLSS-------------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED 551 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~-------------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~ 551 (772)
.+|+|+||.||+|++.. ...+++|.+.... ......|.+|+.+++.++||||+++++++...
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-----RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 47889999999998532 2246677654322 22345788999999999999999999999877
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-------E
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-------A 624 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-------~ 624 (772)
. ..++||||+++|+|..+++. ....+++..+.+++.||++||+|||+.+ |+||||||+|||++.++. +
T Consensus 77 ~--~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 77 V--ENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred C--CCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCcee
Confidence 6 56999999999999888753 3346899999999999999999999988 999999999999987654 8
Q ss_pred EEccccCccCCC-----CCCccccchhhhc-cCCCCCCCchHHHHHHHHHHH-cCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 625 KISDFSFWNNTT-----AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMI-TGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 625 kLsDFGla~~~~-----~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELl-tG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|++|||++.... .++..|+|||.+. +..++.++|||||||++|||+ +|+.|+..... .+. .........
T Consensus 152 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~-~~~~~~~~~- 227 (262)
T cd05077 152 KLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL--AEK-ERFYEGQCM- 227 (262)
T ss_pred EeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--hHH-HHHHhcCcc-
Confidence 999999876432 2345799999886 567899999999999999998 58888753221 111 111111110
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.. ....+++.++|.+||+.||++||++.+|++.+
T Consensus 228 --~~--------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 228 --LV--------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --CC--------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 11 11235688999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=315.25 Aligned_cols=247 Identities=17% Similarity=0.255 Sum_probs=187.5
Q ss_pred cccccCcc--ceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 482 IIGSFSDG--TVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 482 iig~lg~G--~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+|+| +|++||+++. .+++.||+|++...... ....+.+.+|+++++.++|||||++++++..++ ..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc---HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--EEEE
Confidence 34556666 7899999985 57889999988654321 223456788999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.....
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMINH 154 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence 999999999999986544456899999999999999999999988 999999999999999999999999853211
Q ss_pred -------------CCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 636 -------------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 636 -------------~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
..+...|+|||.+.. ..++.++|||||||++|||+||+.||..... .........+.. ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~--~~~ 230 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA--TQMLLEKLNGTV--PCL 230 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch--hHHHHHHhcCCc--ccc
Confidence 112335899999865 4689999999999999999999999963221 111111111100 000
Q ss_pred cC-------------------C------------------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VD-------------------P------------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d-------------------~------------------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ . ...........++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 0 000112234567889999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=303.14 Aligned_cols=241 Identities=26% Similarity=0.439 Sum_probs=196.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++...+|.|+||.||+|... ++.+++|.+..... ..+++.+|+.++++++|+||+++++++...+ ..++||
T Consensus 9 ~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~ 79 (256)
T cd05039 9 KLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST------AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--PLYIVT 79 (256)
T ss_pred cceeeeecCCCceEEEEEec-CcEEEEEEeccchh------HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--CeEEEE
Confidence 45677889999999999876 78899998864321 3467999999999999999999999998765 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 9999999999997554457999999999999999999999988 99999999999999999999999998765432
Q ss_pred ---CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|+|||.+....++.++||||||+++||+++ |+.||... ...+.......+ ... ..+...+
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~-~~~---------~~~~~~~ 225 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPHVEKG-YRM---------EAPEGCP 225 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhcC-CCC---------CCccCCC
Confidence 2335889999988889999999999999999997 99998533 222222222211 110 1112345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+++.+++.+||..+|++||++.|++++|+.+
T Consensus 226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 7788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=316.71 Aligned_cols=248 Identities=21% Similarity=0.350 Sum_probs=193.9
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|.|+||+||+|+. .+++.||||.+..... ......+.+|++++.++ +||||+++++++...+.
T Consensus 10 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 10 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred cccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC----hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 6778899999999999973 3467899998864321 22345788999999999 78999999998876543
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------------------------------------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------------------------------------------------- 576 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------------------------- 576 (772)
..++||||+++|+|.++++...
T Consensus 86 -~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 86 -PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred -ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 4689999999999999986421
Q ss_pred --------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-----------
Q 004124 577 --------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA----------- 637 (772)
Q Consensus 577 --------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~----------- 637 (772)
...++|..+..++.|++.||+|||+.+ |+||||||+|||+++++++||+|||+++....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123688889999999999999999988 99999999999999999999999998764311
Q ss_pred CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHH
Q 004124 638 AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 716 (772)
Q Consensus 638 ~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l 716 (772)
+...|+|||.+.+..++.++|||||||++|||++ |..||...... .........+ ... ..+.....++
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~-~~~---------~~~~~~~~~~ 311 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEG-TRM---------RAPDYTTPEM 311 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHHHHhcc-CCC---------CCCCCCCHHH
Confidence 1235899999988899999999999999999997 89998643222 1112211111 110 0111223568
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 717 LVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 717 ~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+++.+||+.+|++||++.||++.|+.+.+
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=303.49 Aligned_cols=242 Identities=24% Similarity=0.363 Sum_probs=182.6
Q ss_pred ccCccceEEEEEEEEcC---CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLSS---GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~---~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+|+|+||.||+|+..+ +..+++|++..... ......|.+|+.++++++||||++++|++.+.. ..++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS----VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--PYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--CcEEEEE
Confidence 57899999999998653 35678887654321 223457899999999999999999999998766 5699999
Q ss_pred ccCCCChhhhhhhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 562 YSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 562 y~~~GsL~~~L~~~~---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+++|+|.++++... ....++..+..++.|++.|++|||+.+ ++||||||+||++++++++||+|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 999999999986432 234677888899999999999999988 99999999999999999999999998753221
Q ss_pred ----------CCccccchhhhccC-------CCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 638 ----------AKTGSAAMELLETS-------AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 638 ----------~~~~~~aPE~~~~~-------~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
+...|+|||.+... .++.++|||||||++|||++ |+.||..... .+.......+. ...
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~--~~~ 229 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTYTVREQ--QLK 229 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHhhcc--cCC
Confidence 23458999987532 36789999999999999996 9999964322 11111111111 111
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
..++... ....+++.+++.+|| .+|++|||++||++.|+
T Consensus 230 ~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1122211 123456788999999 58999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=325.39 Aligned_cols=242 Identities=18% Similarity=0.244 Sum_probs=190.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|.+...... .......+.+|++++.+++||||+++++.+.+.+ ..++|
T Consensus 4 ~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv 79 (376)
T cd05598 4 VKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL--MRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFV 79 (376)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH--hhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--EEEEE
Confidence 67889999999999999854 5788999987543211 1223456889999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...++......++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 80 ~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 80 MDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999999853 346788888899999999999999988 999999999999999999999999986311
Q ss_pred ------------------------------------------------CCCCccccchhhhccCCCCCCCchHHHHHHHH
Q 004124 636 ------------------------------------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILF 667 (772)
Q Consensus 636 ------------------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ 667 (772)
..++..|+|||.+.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 13556799999999999999999999999999
Q ss_pred HHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCC---CHHHHHHH
Q 004124 668 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP---SMRGIAAK 740 (772)
Q Consensus 668 ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP---s~~evl~~ 740 (772)
||+||+.||.... ..+............. .+ .....+.++.+++.+|+ .+|++|+ ++.|+++.
T Consensus 236 ell~G~~Pf~~~~--~~~~~~~i~~~~~~~~---~~----~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADT--PAETQLKVINWETTLH---IP----SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCC--HHHHHHHHhccCcccc---CC----CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999999996433 2222222221111100 01 01123456777888876 5999999 88998764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=310.49 Aligned_cols=243 Identities=23% Similarity=0.371 Sum_probs=193.7
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|.... +..+++|...... .......|.+|++++..++||||+++++++....
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred eEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 577889999999999998642 3678888865332 1223457889999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++||||+++|+|.+++.... ...++|..+..++.|++.||.|||+.+ |+||||||+||++++++.+||
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCCCCEEE
Confidence 5799999999999999986432 234789999999999999999999988 999999999999999999999
Q ss_pred ccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.... ++..|+|||......++.++|||||||++||++| |+.||... +..+.......+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~- 237 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFVIDG- 237 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHHhcC-
Confidence 99998753211 1346899999988889999999999999999998 89898532 223322222211
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
.. ...+..++.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 238 ~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 GH---------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CC---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11 11122335788999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=323.66 Aligned_cols=242 Identities=18% Similarity=0.245 Sum_probs=185.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|.. .+++.||+|+.. ...+.+|++++++++|||||++++++.... ..++
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~l 160 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----------RGGTATEAHILRAINHPSIIQLKGTFTYNK--FTCL 160 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--eeEE
Confidence 47888999999999999985 467888988532 134678999999999999999999998776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|+||+. ++|..++.. ...+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 161 v~e~~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 161 ILPRYK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred EEecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 999995 789888753 356899999999999999999999988 999999999999999999999999998532
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-----CHHHHHHHHhh--cCCCCcc--
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-----SLENWASEYLK--GEQPLKD-- 699 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-----~~~~~~~~~~~--~~~~~~~-- 699 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.|+..... +.......... +..+...
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1245678999999888999999999999999999999988753211 11111111111 0000000
Q ss_pred -----------------ccCCccc-c--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 -----------------IVDPTLK-S--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 -----------------~~d~~l~-~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+... . .....+.++.+++.+||+.||++|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0 01134567889999999999999999999985
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=323.83 Aligned_cols=241 Identities=18% Similarity=0.257 Sum_probs=188.0
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.+|+|++...... .......+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 4 ~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~--~~~lv 79 (382)
T cd05625 4 VKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL--LRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFV 79 (382)
T ss_pred EEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh--hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--EEEEE
Confidence 5678899999999999986 46788999988643221 1234467889999999999999999999998877 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 80 MDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999999853 345788888999999999999999988 999999999999999999999999986421
Q ss_pred ----------------------------------------------------CCCCccccchhhhccCCCCCCCchHHHH
Q 004124 636 ----------------------------------------------------TAAKTGSAAMELLETSAVDLESNVYSFG 663 (772)
Q Consensus 636 ----------------------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfG 663 (772)
..++..|+|||.+.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 1245579999999989999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 004124 664 TILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS---MRGIAA 739 (772)
Q Consensus 664 vvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs---~~evl~ 739 (772)
|++|||+||+.||.... ..+............. .+. ....++++.+++.+++ .+|++|++ +.|+++
T Consensus 236 vil~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~---~p~----~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQT--PLETQMKVINWQTSLH---IPP----QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCC--HHHHHHHHHccCCCcC---CCC----cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 99999999999996432 2222222222111110 010 1123456677777765 59999987 888765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=333.25 Aligned_cols=244 Identities=18% Similarity=0.298 Sum_probs=197.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC-----
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----- 553 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----- 553 (772)
+.+.+.+|+|+||+||+|+. .+++.||||.+..... .......+.+|+.++..++|+||+++++.+...+.
T Consensus 34 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 34 YWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred EEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 36778899999999999985 4789999998865432 23345678899999999999999999887654321
Q ss_pred -ceEEEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 554 -FTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 554 -~~~~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
...++||||+++|+|.++++.. ....+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCCCCEEEEecc
Confidence 1358999999999999998643 2356889999999999999999999988 9999999999999999999999999
Q ss_pred CccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 631 FWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 631 la~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
+++... .++..|+|||.+.+..++.++|||||||++|||++|+.||.. .+..+.+.....+...
T Consensus 189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~--~~~~~~~~~~~~~~~~--- 263 (496)
T PTZ00283 189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG--ENMEEVMHKTLAGRYD--- 263 (496)
T ss_pred cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHhcCCCC---
Confidence 875321 245679999999999999999999999999999999999953 3444444444433211
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+...+.++.+++.+||+.||++||++.++++.
T Consensus 264 -------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 264 -------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1223445778999999999999999999999864
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-36 Score=322.45 Aligned_cols=243 Identities=19% Similarity=0.294 Sum_probs=207.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.++.+|.|+||.++..+.+ ++..+++|++...... ...++...+|+.++++++|||||.+++.+..++. ..+|
T Consensus 6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t---~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~-~l~I 81 (426)
T KOG0589|consen 6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT---EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ-LLCI 81 (426)
T ss_pred hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC---chhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-eEEE
Confidence 356788999999999988854 5678899988765533 3344578899999999999999999999988773 2799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||+|++||++.+.+..+....++..+...++.|++.|+.|||+.. |+|||||+.||++..+..+||+|||+++...
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 999999999999998777778999999999999999999999777 9999999999999999999999999987543
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.+++.|+.||.+.+..|..|+||||+||++|||++-+.+|.. .++...+.++..+. ....+
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a--~~m~~Li~ki~~~~----------~~Plp 227 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA--SNMSELILKINRGL----------YSPLP 227 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc--cchHHHHHHHhhcc----------CCCCC
Confidence 357789999999999999999999999999999999999954 34555555555442 22344
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++..++..|+..+|+.||++.+++.+
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 5677889999999999999999999999976
|
|
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=306.65 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=192.0
Q ss_pred hcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++|+++++.+|+|+||.||+|... ++..+++|.+.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~ 76 (282)
T cd06643 4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-----EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--N 76 (282)
T ss_pred HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--E
Confidence 455678899999999999999976 46677777764332 223467889999999999999999999998776 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|..++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 77 ~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 77 LWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccCCCEEEccccccccc
Confidence 7999999999999888753 2356899999999999999999999988 999999999999999999999999987532
Q ss_pred C---------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 636 T---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~---------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
. .++..|+|||.+. ...++.++|||||||++|||++|+.||.... ..+..........+ ...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--~~~~~~~~~~~~~~--~~~ 229 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSEPP--TLA 229 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC--HHHHHHHHhhcCCC--CCC
Confidence 1 2345789999873 4567889999999999999999999986432 22222222222111 111
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+...+.++.+++.+||+.+|++||++.++++
T Consensus 230 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 ------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11234567899999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=310.56 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=194.1
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
.+...+|+|+||.||+|... .+..+|+|.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH----SSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC----hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 56677889999999999742 345788887654321 22346789999999999 7999999999998776
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
..++||||+++|+|.++++......+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+|++|||+++
T Consensus 113 -~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 113 -PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred -ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCCCeEEECCCcccc
Confidence 5799999999999999997544445899999999999999999999988 9999999999999999999999999876
Q ss_pred CCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 634 NTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 634 ~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.... ....|+|||.+....++.++|||||||++|||+| |+.||...... .. ...........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~-~~~~~~~~~~~---- 263 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SK-FYKLIKEGYRM---- 263 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HH-HHHHHHcCCcC----
Confidence 4321 1235899999988889999999999999999998 99998643321 11 11112111100
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+....+++.+++.+||..+|++||++.|+++.|+++
T Consensus 264 -----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 -----AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 01122346789999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=308.61 Aligned_cols=251 Identities=19% Similarity=0.306 Sum_probs=188.6
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ceEEE
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FTRMM 558 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~~~L 558 (772)
...+|.|+||.||+|++. ++..||||++...... -.+|+++|++++|||||++.-++..... ....+
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 456778999999999965 5689999988654321 2378999999999999999988865432 24578
Q ss_pred EEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~~ 635 (772)
||||||. +|+++++.. ....++...+.-+..||.+||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+..
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 9999987 999888632 2456777777889999999999999988 9999999999999976 99999999999876
Q ss_pred CCCC--------ccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC--HHHHHHHHhhcCCC--------
Q 004124 636 TAAK--------TGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQP-------- 696 (772)
Q Consensus 636 ~~~~--------~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~--~~~~~~~~~~~~~~-------- 696 (772)
..+. ..|.|||.+. ...|+.+.||||.|||+.||+-|+.-|.++... +.+.+ +++ |...
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIi-k~l-G~Pt~e~I~~mn 254 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEII-KVL-GTPTREDIKSMN 254 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHH-HHh-CCCCHHHHhhcC
Confidence 6543 3678999875 467999999999999999999999988754321 11111 111 1000
Q ss_pred --CccccCCcccc------ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 697 --LKDIVDPTLKS------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 697 --~~~~~d~~l~~------~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
..+...+.+.. +......+..+++.++++.+|.+|.++.|++.. .++++..
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 01111122211 233456789999999999999999999998854 4454443
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=342.44 Aligned_cols=252 Identities=19% Similarity=0.217 Sum_probs=198.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++...... .....++|.+|++++++++|||||++++++.+++ ..++|
T Consensus 5 eIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~--~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~--~lyLV 80 (932)
T PRK13184 5 DIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE--NPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD--PVYYT 80 (932)
T ss_pred EEEEEEecCCCEEEEEEEECCCCcEEEEEEECccccc--CHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC--EEEEE
Confidence 67788999999999999965 5889999988643221 1334567999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhh---------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 560 FEYSPNGSLFEHLHIQ---------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~---------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
|||+++|+|.+++... ....+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999988632 1234677888999999999999999988 9999999999999999999999999
Q ss_pred CccCC---------------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH
Q 004124 631 FWNNT---------------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 683 (772)
Q Consensus 631 la~~~---------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~ 683 (772)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 87643 124567999999999999999999999999999999999996432211
Q ss_pred HHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhhhcC
Q 004124 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAME 748 (772)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~ 748 (772)
. .... ...++.........+..+.+++.+||+.||++|| +++++.+.|+...+..
T Consensus 239 i--~~~~--------~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 239 I--SYRD--------VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred h--hhhh--------hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1 1000 0001100000123456788899999999999995 6777888888775543
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=300.66 Aligned_cols=241 Identities=24% Similarity=0.391 Sum_probs=187.6
Q ss_pred ccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 485 SFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+|+|+||.||+|+..+ ...+++|.+.... .....+.+.+|+.+++.++||||+++++++...+. ..++|+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 76 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT----DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVVL 76 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccC----CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEEE
Confidence 46889999999998642 3468888764321 12234678899999999999999999998865443 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 77 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 77 PYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred ecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999998643 345678888999999999999999987 99999999999999999999999998864321
Q ss_pred ----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCC-CcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 638 ----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 638 ----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
....|+|||......++.++|||||||++|||++|. .||.. .+..+.......+...
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~--~~~~~~~~~~~~~~~~---------- 221 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD--VDSFDITVYLLQGRRL---------- 221 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC--CCHHHHHHHHhcCCCC----------
Confidence 123589999998889999999999999999999954 45532 2333333333322111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
..+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 011223467889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=306.97 Aligned_cols=243 Identities=20% Similarity=0.343 Sum_probs=193.5
Q ss_pred ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|+.. .+..+++|.+.... .....+.|.+|+.++.+++||||+++++++..++ ..
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 80 (267)
T cd05066 7 KIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--PV 80 (267)
T ss_pred EeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--cc
Confidence 46678899999999999864 23368888765322 1233567999999999999999999999998776 57
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999998643 346899999999999999999999988 9999999999999999999999999876432
Q ss_pred CC------------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 AA------------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~~------------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ...|++||.+.+..++.++|||||||++||+++ |+.||.... ..+.......+ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~~~-~~~------ 228 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS--NQDVIKAIEEG-YRL------ 228 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC--HHHHHHHHhCC-CcC------
Confidence 11 125889999988899999999999999999887 999985332 22222222221 110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
......+..+.+++.+||+.+|++||+|.++++.|+++
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 ---PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ---CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01123456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=311.54 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=198.1
Q ss_pred ccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
.+.+.+|+|+||.||+|+.. ....+++|.+..... .....++.+|+++++++ +||||+++++++...
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT----DKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC----hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 56788999999999999742 234678887653321 22345788999999999 699999999999876
Q ss_pred CCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++.... ...++|...+.++.|++.||+|||+.+ |+||||||+|||
T Consensus 91 ~--~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~Nil 166 (314)
T cd05099 91 G--PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAARNVL 166 (314)
T ss_pred C--ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccceeEE
Confidence 6 5799999999999999986432 235899999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
+++++.+||+|||+++.... ....|+|||.+....++.++|||||||++|||++ |..||... ...+
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~--~~~~ 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI--PVEE 244 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC--CHHH
Confidence 99999999999999864321 1135899999988899999999999999999999 88888532 2223
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
.......+ ... ..+..++.++.+++.+||+.+|++||++.|+++.|+++.....+.
T Consensus 245 ~~~~~~~~-~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 300 (314)
T cd05099 245 LFKLLREG-HRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEE 300 (314)
T ss_pred HHHHHHcC-CCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCC
Confidence 22222221 110 112334567889999999999999999999999999987755443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=303.91 Aligned_cols=243 Identities=19% Similarity=0.331 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEEcC-C---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|.|+||.||+|+... + ..+++|.+.... .....++|..|++++++++||||+++++++..++ ..
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~ 80 (269)
T cd05065 7 KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--PV 80 (269)
T ss_pred EEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC--ce
Confidence 566778899999999999653 2 358898875432 1334567999999999999999999999998776 56
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 81 MIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred EEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCCCcEEECCCccccccc
Confidence 9999999999999998643 356899999999999999999999988 9999999999999999999999999875332
Q ss_pred CC--------------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 637 AA--------------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 637 ~~--------------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.. ...|++||.+.+..++.++|||||||++||+++ |..||.... ..+........ ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~~~-~~~---- 230 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIEQD-YRL---- 230 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHHcC-CcC----
Confidence 11 125889999998999999999999999999987 999985322 22222222111 111
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+.+++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 231 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 -----PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01123456788999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=302.03 Aligned_cols=240 Identities=23% Similarity=0.350 Sum_probs=195.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+++.. ++..+++|.+..... ....+.+.+|+.++++++|+||+++++++.+.+ ..++|
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 76 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS----SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIV 76 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--EEEEE
Confidence 56788999999999999965 678899998754321 223467889999999999999999999998876 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.......+++.....++.|++.||.|||+.+ |+|+||||+||++++++.++++|||+++...
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 99999999999886545566889999999999999999999988 9999999999999999999999999875332
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||...+..++.++||||||+++|||++|+.||... +..........+... ..+.
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~~ 222 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN--SWKNLILKVCQGSYK----------PLPS 222 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC--CHHHHHHHHhcCCCC----------CCCc
Confidence 2344689999998888999999999999999999999999643 223333332222111 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.+++.+||+.||++||++.|++..
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 345678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=299.71 Aligned_cols=241 Identities=24% Similarity=0.396 Sum_probs=197.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|.|+||.||+|..++++.++||.+..... ..+++.+|++++++++|+||+++++++.... ..++||
T Consensus 9 ~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 80 (261)
T cd05034 9 KLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--PIYIVT 80 (261)
T ss_pred eeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc------CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--ceEEEE
Confidence 56788899999999999988888899998764322 1357899999999999999999999988766 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++.......+++..+..++.+++.|++|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 9999999999997655567899999999999999999999988 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
....|++||...+..++.++|||||||++||++| |+.||... ...........+... ..+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~ 226 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM--TNREVLEQVERGYRM----------PRP 226 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------CCC
Confidence 1235899999988889999999999999999999 99998533 222333332222110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 2235678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=320.92 Aligned_cols=242 Identities=18% Similarity=0.246 Sum_probs=190.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. ++..+|+|.+...... .....+.+.+|+++++.++||||+++++++.+.+ ..++|
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--~~~lv 121 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI--KRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--YLYMV 121 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEE
Confidence 67788999999999999965 6788999988643211 1223345789999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ..++......++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 122 MEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999998853 34778888889999999999999988 9999999999999999999999999875322
Q ss_pred -------CCCccccchhhhccC----CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 -------AAKTGSAAMELLETS----AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~----~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+... .++.++|||||||++|||+||+.||.... ................ .+.
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--~~~~~~~i~~~~~~~~---~~~- 270 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--LVGTYSKIMDHKNSLT---FPD- 270 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC--HHHHHHHHHcCCCcCC---CCC-
Confidence 245679999988543 47899999999999999999999996433 2333333332211110 010
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
....+.++.+++.+|++.+|++ |+++.|+++.
T Consensus 271 ---~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 271 ---DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ---cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1124567889999999999988 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=299.82 Aligned_cols=238 Identities=21% Similarity=0.366 Sum_probs=192.8
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|.|+||.||+|.+.++..+++|.+..... ...+|.+|++++++++||||+++++++.... ..++||
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~ 78 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM------SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--PICLVF 78 (256)
T ss_pred EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC------CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--ceEEEE
Confidence 45678899999999999987788899998754322 1346889999999999999999999988766 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++... ...+++..+..++.+++.|++|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred EcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999999998633 345889999999999999999999988 99999999999999999999999998753211
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
....|+|||...+..++.++|||||||++|||++ |+.||... ...+.......+... ..+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~----~~~~----- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR--SNSEVVETINAGFRL----YKPR----- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC--CHHHHHHHHhCCCCC----CCCC-----
Confidence 1236899999988899999999999999999998 99998532 223333333222111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
..++++.+++.+||+.+|++||++.|+++.|
T Consensus 225 -~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 -LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1246789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=311.49 Aligned_cols=243 Identities=20% Similarity=0.271 Sum_probs=192.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||++... +++.+|+|.+....... ......+.+|+.++++++|+||+++++.+...+ ..++|
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv 78 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGESMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLV 78 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc--hHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--EEEEE
Confidence 34567889999999999865 67899999876543221 223356788999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++....
T Consensus 79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999999999886545556899999999999999999999988 9999999999999999999999999875432
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhcCCCCccccCCccccccH
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||........ +......... . .....
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~-------~~~~~ 226 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---Q-------EEYSE 226 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---h-------hhcCc
Confidence 245578999999988999999999999999999999999964332111 1111111110 0 01122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
....++.+++.+||+.||++||| +.|+++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 34567889999999999999999 788875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=313.15 Aligned_cols=233 Identities=18% Similarity=0.273 Sum_probs=185.3
Q ss_pred ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEec
Q 004124 485 SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
.+|+|+||+||+|+.. +++.+|+|++......+ ....+.+.+|+.++.++ +||||+++++++...+ ..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~ 77 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD--DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--RLFLVIEY 77 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--EEEEEEeC
Confidence 4788999999999964 56889999886543221 23345688999999888 6999999999998776 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
+++|+|..++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 78 ~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 153 (327)
T cd05617 78 VNGGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT 153 (327)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence 999999988753 356899999999999999999999988 999999999999999999999999987632
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC----CCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN----GSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....++........ +. ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~---------~~p 223 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-PI---------RIP 223 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC-CC---------CCC
Confidence 124567899999999999999999999999999999999996321 12223333222221 10 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
...+.++.+++.+||+.||++|+++.
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 23446678999999999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=303.78 Aligned_cols=242 Identities=22% Similarity=0.351 Sum_probs=181.7
Q ss_pred ccCccceEEEEEEEEcCC---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLSSG---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
++|+|+||.||+|+..++ ..+++|.+.... .......|.+|+++++.++||||++++|++...+ ..++|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA----TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--PYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC----ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--ceEEEEE
Confidence 578999999999985443 356666554321 1233467899999999999999999999998776 5799999
Q ss_pred ccCCCChhhhhhhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 562 YSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 562 y~~~GsL~~~L~~~~---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+++|+|.+++.... ....++.....++.|++.|++|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCCCcEEEeccccccccccc
Confidence 999999999986532 233567888899999999999999988 99999999999999999999999998754211
Q ss_pred ----------CCccccchhhhc-------cCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 638 ----------AKTGSAAMELLE-------TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 638 ----------~~~~~~aPE~~~-------~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
....|+|||... ...++.++|||||||++|||++ |..||.... ..+.......... ..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~~~~~~~~~~~~--~~ 229 (269)
T cd05042 154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS--DEQVLKQVVREQD--IK 229 (269)
T ss_pred hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC--HHHHHHHHhhccC--cc
Confidence 123589999864 3456889999999999999999 778885322 1222222222211 11
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
..++. .......++.+++..|| .||++||+++||++.|.
T Consensus 230 ~~~~~---~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 230 LPKPQ---LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCc---ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11121 22334567778899999 49999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=305.68 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=191.2
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHh--cCCCCcccceeEEEEcCC--CceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS--KVNHKNFVNLIGYCEEDE--PFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~--~l~HpNIV~l~g~~~~~~--~~~~ 556 (772)
++++.+|+|+||.||||++.+ +.||||++... .+..|..|-++.+ .++|+||++++++-.... ..+.
T Consensus 213 ~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~--------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ--------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhHHHhhcCccceeehhhccC-ceeEEEecCHH--------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 356677899999999999874 88999998643 3456777777666 458999999999865433 3356
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-------CCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-------LTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-------~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
+||+||.++|+|.+||. ...++|....+|+..+++||+|||+ .+|+|+|||||++||||..|+++.|+||
T Consensus 284 wLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred eEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 99999999999999995 3468999999999999999999996 3578999999999999999999999999
Q ss_pred cCccCC-----------CCCCccccchhhhccCC-CC-----CCCchHHHHHHHHHHHcCCCccc---------------
Q 004124 630 SFWNNT-----------TAAKTGSAAMELLETSA-VD-----LESNVYSFGTILFEMITGRISYS--------------- 677 (772)
Q Consensus 630 Gla~~~-----------~~~~~~~~aPE~~~~~~-~s-----~ksDVwSfGvvL~ELltG~~P~~--------------- 677 (772)
|+|... ..|+..|||||++++.. +. .+.||||+|.|||||+++..-++
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 998643 23566899999986532 11 46899999999999998654332
Q ss_pred CCCCCHHHHHHHHhhcCCCCccccCCccccc--cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 678 IENGSLENWASEYLKGEQPLKDIVDPTLKSF--QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
+....+.+....++... ..|.+++. ....+..+.+.+..||..||+.|.|+.-|.+++.++....+.
T Consensus 441 G~hPt~e~mq~~VV~kK------~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKK------QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred cCCCCHHHHHHHHHhhc------cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 11122222222222211 11222211 123456788899999999999999999999999998887765
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=308.60 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=190.6
Q ss_pred ccccccCccceEEEEEEEEc-----------------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-----------------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-----------------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
++.+.+|+|+||.||++... ++..+|+|...... ......+|.+|++++++++|+||++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 8 TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA----NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 67788999999999998643 23457888775332 1233567999999999999999999
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhhhhhhc---------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004124 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE---------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
+++++...+ ..++||||+++|+|.+++.... ...+++.....++.|++.||+|||+.+ |+||||||+
T Consensus 84 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~ 159 (296)
T cd05095 84 LLAVCITSD--PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRDLATR 159 (296)
T ss_pred EEEEEecCC--ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecccCChh
Confidence 999998876 5699999999999999986432 124788899999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc--CCCcccCCCC
Q 004124 615 SIYLTEDYAAKISDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENG 681 (772)
Q Consensus 615 NILld~~~~~kLsDFGla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt--G~~P~~~~~~ 681 (772)
|||+++++.+||+|||+++..... ...|++||....+.++.++|||||||++|||+| |..||...
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~-- 237 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL-- 237 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc--
Confidence 999999999999999998643211 235889998888889999999999999999998 66777532
Q ss_pred CHHHHHHHH---hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 682 SLENWASEY---LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 682 ~~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+..... ..... ..... ..+..++..+.+++.+||+.||++||++.||++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIENTGEFFRDQG--RQVYL----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHHHHHHHHhhcc--ccccC----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 222222211 11100 00000 1112344678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=308.24 Aligned_cols=251 Identities=21% Similarity=0.259 Sum_probs=186.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcCC---C
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDE---P 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~~---~ 553 (772)
++++.+|+|+||+||+|+.. +++.+|+|.+......+ .....+.+|+++++++ +||||+++++++.... .
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 3 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred eEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 56778899999999999865 67889999876543221 1123455677666655 7999999999886431 2
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...++||||++ ++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccCccc
Confidence 35799999997 58988886544556899999999999999999999988 9999999999999999999999999876
Q ss_pred CCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cC---CCCc--
Q 004124 634 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GE---QPLK-- 698 (772)
Q Consensus 634 ~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~---~~~~-- 698 (772)
... .++..|+|||.+.+..++.++||||+||++|||++|+.||..... ......... +. ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH--HHHHHHHHHHhCCCChhhCccc
Confidence 432 234568999999888999999999999999999999999854322 111111111 00 0000
Q ss_pred -----cccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 -----DIVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 -----~~~d~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+. .....+...+++.+++.+|++.||++|||+.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 11112234567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=306.80 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=191.9
Q ss_pred ccccccCccceEEEEEEEEcC-----------------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----------------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----------------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
++++.+|+|+||.||+|+... +..+++|.+..... ....+.|.+|++++.+++||||++
T Consensus 8 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 8 NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS----DNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred cccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC----HHHHHHHHHHHHHHHhcCCCCEeE
Confidence 677889999999999998643 24578887654321 234568999999999999999999
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhhhhhhc---------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004124 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE---------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
+++++..++ ..++||||+++++|.+++.... ...+++...+.++.|++.||+|||+.+ |+||||||+
T Consensus 84 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~ 159 (296)
T cd05051 84 LLGVCTVDP--PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATR 159 (296)
T ss_pred EEEEEecCC--CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--ccccccchh
Confidence 999998876 5799999999999999986432 126899999999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc--CCCcccCCCC
Q 004124 615 SIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT--GRISYSIENG 681 (772)
Q Consensus 615 NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt--G~~P~~~~~~ 681 (772)
||+++.++.+||+|||+++.... .+..|+|||.+....++.++|||||||++|||++ |..||....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~- 238 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT- 238 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC-
Confidence 99999999999999998764321 1236899999988889999999999999999998 667774322
Q ss_pred CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
................ .......+..++.++.+++.+||+.||++||++.||++.|+
T Consensus 239 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 -DQQVIENAGHFFRDDG---RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -hHHHHHHHHhcccccc---ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1221121111100000 00001112234568999999999999999999999998876
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=300.64 Aligned_cols=231 Identities=24% Similarity=0.350 Sum_probs=180.9
Q ss_pred ccCccceEEEEEEEEcCCc-----------EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 485 SFSDGTVGTVYKGTLSSGV-----------EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~~-----------~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
.+|+|+||.||+|...... .+++|...... .....|.+|+.++++++||||++++|++.. .
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH------RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccch------hhHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 4788999999999976433 35555543221 114679999999999999999999999987 4
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-------cEEE
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-------AAKI 626 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-------~~kL 626 (772)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 74 -~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 74 -ENIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred -CcEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEe
Confidence 468999999999999998643 236899999999999999999999988 99999999999999887 7999
Q ss_pred ccccCccCCC-----CCCccccchhhhccC--CCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 627 SDFSFWNNTT-----AAKTGSAAMELLETS--AVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 627 sDFGla~~~~-----~~~~~~~aPE~~~~~--~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
+|||++.... .+...|+|||.+... .++.++|||||||++|||++ |..||.... ..++..... ......
T Consensus 150 ~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~--~~~~~~~~~-~~~~~~ 226 (259)
T cd05037 150 SDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS--SSEKERFYQ-DQHRLP 226 (259)
T ss_pred CCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC--chhHHHHHh-cCCCCC
Confidence 9999987532 345578999998766 78999999999999999999 577774332 222222111 111000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.....++.+++.+||..+|++||++.||++.|
T Consensus 227 -----------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 227 -----------MPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -----------CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00116788999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=305.34 Aligned_cols=241 Identities=22% Similarity=0.263 Sum_probs=190.7
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
..+.+|+|+||+||+|+.. +++.+|+|.+....... ......+.+|++++++++|+||+.+++++..++ ..++||
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~ 79 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK--RKGESMALNEKQILEKVNSQFVVNLAYAYETKD--ALCLVL 79 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh--hhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--EEEEEE
Confidence 4566889999999999864 67889999876543221 223356788999999999999999999988776 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 9999999998886544557999999999999999999999988 9999999999999999999999999875321
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||....... ..+......... .+..
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 226 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE-----------VYSA 226 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc-----------ccCc
Confidence 23557899999988899999999999999999999999996432211 111111111110 1123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
....++.+++.+||+.||++||+ +.+++.
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 34567889999999999999999 556654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=301.00 Aligned_cols=240 Identities=22% Similarity=0.364 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|....+..+++|.+.... ...+.|.+|++++++++|+||+++++++.. . ..+++|
T Consensus 9 ~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--~~~~v~ 79 (260)
T cd05073 9 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 79 (260)
T ss_pred eEEeEecCccceEEEEEEecCCccEEEEecCCCh------hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C--CeEEEE
Confidence 6778899999999999998878889998775322 124578999999999999999999999877 3 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.+.....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 9999999999997555567899999999999999999999987 99999999999999999999999998753221
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|++||.+....++.++|||||||++||++| |+.||.... ........ ...... ...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~-~~~~~~---------~~~ 225 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRAL-ERGYRM---------PRP 225 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHH-hCCCCC---------CCc
Confidence 1234889999988889999999999999999999 899986432 12222211 111111 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
...+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2345678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=310.39 Aligned_cols=233 Identities=15% Similarity=0.234 Sum_probs=186.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
+....+|+|+||+||+|+.. +++.||+|++...... .....+.+..|.+++..+. |++|+++++++...+ ..++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~l 78 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD--RLYF 78 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC--EEEE
Confidence 44567889999999999864 6788999988643211 1223456788899998885 577888998888776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 79 v~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 79 VMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999999999885 3356899999999999999999999988 999999999999999999999999987642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +.............. .+
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~--~~~~~~~~i~~~~~~-----------~p 221 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE--DEDELFQSIMEHNVS-----------YP 221 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC-----------CC
Confidence 12456799999999889999999999999999999999999643 233333333332211 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
...+.++.+++.+||+.+|++|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 2344678899999999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=318.52 Aligned_cols=241 Identities=17% Similarity=0.264 Sum_probs=188.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.. +++.+|+|++...... .......+.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~lv 79 (360)
T cd05627 4 ESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML--EKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR--NLYLI 79 (360)
T ss_pred eEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh--hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEE
Confidence 56788999999999999865 6788999988643221 1233467889999999999999999999998877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 80 MEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999853 356889999999999999999999988 999999999999999999999999987532
Q ss_pred ----------------------------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCc
Q 004124 636 ----------------------------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRIS 675 (772)
Q Consensus 636 ----------------------------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P 675 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 1245679999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 004124 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS---MRGIAA 739 (772)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs---~~evl~ 739 (772)
|.... ............... .+.+. .....++.+++.+++ .+|++|++ +.|+++
T Consensus 236 f~~~~--~~~~~~~i~~~~~~~--~~p~~-----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSET--PQETYRKVMNWKETL--VFPPE-----VPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCC--HHHHHHHHHcCCCce--ecCCC-----CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 96432 233333332211110 01110 113456777888766 49999985 566654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=307.93 Aligned_cols=237 Identities=22% Similarity=0.310 Sum_probs=191.8
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|.|+||.||+|+. .++..+++|.+...... ..+.+.+|+++++.++|+||+++++++.... ..++|
T Consensus 23 ~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--~~~lv 95 (296)
T cd06654 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVV 95 (296)
T ss_pred eeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEe
Confidence 5667889999999999985 46789999987654322 2356889999999999999999999998766 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 96 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred ecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 999999999999852 35789999999999999999999988 9999999999999999999999999875321
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||.+....++.++|||||||++|||++|+.||..... ............+ .. ..+.
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--~~~~~~~~~~~~~--~~------~~~~ 240 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATNGTP--EL------QNPE 240 (296)
T ss_pred cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH--HHhHHHHhcCCCC--CC------CCcc
Confidence 234578999999888899999999999999999999999964432 1111111111110 00 1123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.+++.+||..+|++||++.|+++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 45567889999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=304.19 Aligned_cols=241 Identities=20% Similarity=0.231 Sum_probs=188.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+. .+++.+++|+...+... ....+.+|+.++.+++||||+++++++...+ ..++|
T Consensus 12 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-----~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--~~~iv 84 (267)
T cd06646 12 ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD-----DFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--KLWIC 84 (267)
T ss_pred chhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc-----hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--EEEEE
Confidence 6778899999999999996 46788999987644321 2346789999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 85 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999999998853 346899999999999999999999988 9999999999999999999999999876332
Q ss_pred ------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|+|||.+. ...++.++|||||||++|||++|+.||...... .. ...... . ....+...
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~-~~-~~~~~~--~---~~~~~~~~- 232 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RA-LFLMSK--S---NFQPPKLK- 232 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-hh-heeeec--C---CCCCCCCc-
Confidence 1334689999873 455788999999999999999999998532211 00 000000 0 00011111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.+|++||+++++++.
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 112345688999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=305.37 Aligned_cols=240 Identities=21% Similarity=0.346 Sum_probs=187.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC----c
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~----~ 554 (772)
++...+|+|+||.||+|... +++.+++|.+..... ....+.+|+.++.++ +||||+++++++...+. .
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc------cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 45677889999999999864 577889988764321 235688999999998 79999999999875321 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 5789999999999999987544567899999999999999999999988 99999999999999999999999999764
Q ss_pred CC---------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 635 TT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~---------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .+...|+|||.+. ...++.++|||||||++|||++|+.||..... ..... .... ......
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~-~~~~~-~~~~--~~~~~~ 236 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-MRALF-LIPR--NPAPRL 236 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH-HHHHH-HHhc--CCCCCC
Confidence 32 2344689999875 34688899999999999999999999953321 11111 1111 111111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....+.++.+++.+||..+|.+|||+.|+++
T Consensus 237 ~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 237 K-------SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred C-------CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1 1223467889999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=300.77 Aligned_cols=243 Identities=17% Similarity=0.269 Sum_probs=188.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|... ++..+++|++.............+.+.+|++++++++||||+++++++........+++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 45567889999999999864 68899999876543322223344678999999999999999999998876433367899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++++|.+++.. ...+++.....++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 85 MEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999853 345889999999999999999999988 9999999999999999999999999875321
Q ss_pred ---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|+|||.+.+..++.++|||||||++|||+||+.||.... .. +........ . ..+ .
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-~~-~~~~~~~~~-~-----~~~---~ 229 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-AM-AAIFKIATQ-P-----TNP---Q 229 (266)
T ss_pred ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-hH-HHHHHHhcC-C-----CCC---C
Confidence 13346899999988889999999999999999999999996332 11 111111111 0 011 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+....+.+.+++ +||..+|++||+|+||++
T Consensus 230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 230 LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 2233445666677 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=298.38 Aligned_cols=238 Identities=29% Similarity=0.445 Sum_probs=194.1
Q ss_pred ccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 485 SFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+|+|+||.||+|.... +..+++|.+...... ...+.+.+|++.+..++|+||+++++++.... ..++||
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 75 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE----EERKDFLKEARVMKKLGHPNVVRLLGVCTEEE--PLYLVL 75 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccch----hHHHHHHHHHHHHhhcCCCChheeeeeecCCC--ceEEEE
Confidence 57889999999999754 778999987654321 13568999999999999999999999998865 679999
Q ss_pred eccCCCChhhhhhhhc-------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 561 EYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~-------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
||+++|+|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||.+.
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCCCcEEEccccccc
Confidence 9999999999986431 367899999999999999999999988 9999999999999999999999999876
Q ss_pred CCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 634 NTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 634 ~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.... ....|+|||.+....++.++||||+||++|||++ |+.||... ...+.......+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~------- 224 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEYLRKGY------- 224 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCC-------
Confidence 4432 2346899999988899999999999999999999 69998643 2333333332211
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
....+...+.++.+++.+||..+|++||++.|+++.|+
T Consensus 225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 ---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11122344678999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=300.44 Aligned_cols=245 Identities=19% Similarity=0.339 Sum_probs=195.8
Q ss_pred ccccccCccceEEEEEEEEcC-Cc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||.||+|.... +. .+++|....... .....++.+|++++++++||||+++++++.. . .
T Consensus 10 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~ 82 (279)
T cd05057 10 EKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS----PKANKEILDEAYVMASVDHPHVVRLLGICLS-S--Q 82 (279)
T ss_pred EEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C--c
Confidence 567788999999999998643 32 477776643321 2345678999999999999999999999987 3 5
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++... ...+++.....++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred eEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCCCeEEECCCcccccc
Confidence 78999999999999998643 345899999999999999999999987 999999999999999999999999988643
Q ss_pred CCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
... ...|++||......++.++|||||||++||++| |+.||... ...++......+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~-~------ 230 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI--PAVEIPDLLEKGER-L------ 230 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhCCCC-C------
Confidence 221 235899999988899999999999999999999 99999643 33444433332211 1
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..+..++.+++.+||..+|++||++.++++.|+++.+.
T Consensus 231 ---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 231 ---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 01112335688899999999999999999999999987553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=302.57 Aligned_cols=239 Identities=25% Similarity=0.405 Sum_probs=188.9
Q ss_pred ccCccceEEEEEEEEcC-------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 485 SFSDGTVGTVYKGTLSS-------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~-------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+|.|+||.||+|+..+ +..+++|.+..... .....+|.+|++++++++||||+++++++...+ ..+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 75 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT----DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE--PQY 75 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc----hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--CeE
Confidence 46789999999998643 24678887643321 223467899999999999999999999998776 579
Q ss_pred EEEeccCCCChhhhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-----cEEEc
Q 004124 558 MVFEYSPNGSLFEHLHIQE-----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-----AAKIS 627 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~-----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-----~~kLs 627 (772)
+||||+++|+|.++++... ...++|..++.++.|++.||+|||+.+ ++||||||+||+++.+. .+|++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEEC
Confidence 9999999999999996432 234789999999999999999999988 99999999999999877 89999
Q ss_pred cccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCC
Q 004124 628 DFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 628 DFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
|||+++.... ....|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+.......+ .
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~-~ 230 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQHVTAG-G 230 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHHHHhcC-C
Confidence 9998764321 1346899999998999999999999999999998 999986332 22222221111 1
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
. ...+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 231 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 R---------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c---------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 01123345778899999999999999999999998863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=305.96 Aligned_cols=238 Identities=18% Similarity=0.287 Sum_probs=191.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+..++.+|.|+||.||+|... ++..+++|.+..... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 79 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--KLWI 79 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc----hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--ceEE
Confidence 345677889999999999864 567888887754321 223467999999999999999999999998766 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||+++|+|.+++. ...+++..+..++.|+++|+.|||+.+ ++|+||||+||++++++.+||+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 80 IMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 999999999999884 346889999999999999999999988 99999999999999999999999998764322
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|++||.+.+..++.++|||||||++|||+||+.|+..... ........... .....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~----------~~~~~ 222 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP--MRVLFLIPKNS----------PPTLE 222 (277)
T ss_pred chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch--hhHHhhhhcCC----------CCCCC
Confidence 34468999999888899999999999999999999999853221 11111111110 11122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.+|++||+|.|+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 3455678899999999999999999999974
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=302.47 Aligned_cols=247 Identities=20% Similarity=0.272 Sum_probs=189.9
Q ss_pred HHHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc
Q 004124 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 472 l~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
++.+++++... ..+|+|+||.||+|+.. ++..+++|.+..+.. ...+.+.+|++++++++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 3 YEYEYDENGER-VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-----RYVQPLHEEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred cccccccCCce-EEEecCCceEEEEeEecCCCcEEEEEEecCCCH-----HHHHHHHHHHHHHHhcCCCCeeeeeeeecc
Confidence 34455555433 46788999999999954 567899997764432 234578999999999999999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhccCCC--CHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEc
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQEAEHL--DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKIS 627 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l--~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLs 627 (772)
++ ..++|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+
T Consensus 77 ~~--~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 77 NG--FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred CC--EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEe
Confidence 76 6799999999999999986432 234 78888899999999999999988 999999999999986 6799999
Q ss_pred cccCccCCC---------CCCccccchhhhccC--CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 628 DFSFWNNTT---------AAKTGSAAMELLETS--AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 628 DFGla~~~~---------~~~~~~~aPE~~~~~--~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
|||++.... .+...|+|||.+... .++.++|||||||++|||++|+.||.................
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~--- 228 (268)
T cd06624 152 DFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK--- 228 (268)
T ss_pred cchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc---
Confidence 999875321 234578999998654 378999999999999999999999864322111111110000
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+....+++.+++.+||+.+|++||++.|+++
T Consensus 229 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 -------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 011122345577889999999999999999999876
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=307.94 Aligned_cols=248 Identities=19% Similarity=0.291 Sum_probs=190.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|+|+||.||+++.. ++..+++|.+..... .....++.+|++++.+++||||+++++++..++ ..++|
T Consensus 4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 77 (308)
T cd06615 4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK----PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--EISIC 77 (308)
T ss_pred eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--EEEEE
Confidence 56778899999999999865 567777777654321 234467889999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||+++|+|.++++. ...+++.....++.|+++||+|||+ ++ ++||||||+|||+++++.+||+|||++....
T Consensus 78 ~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 78 MEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999999863 3568899999999999999999997 56 9999999999999999999999999876432
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc------------
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD------------ 699 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~------------ 699 (772)
.+...|+|||.+.+..++.++|||||||++|||+||+.||...+. ..+....-........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCCCC
Confidence 234578999999888899999999999999999999999864321 1111111000000000
Q ss_pred --------------ccCCcccccc-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 --------------IVDPTLKSFQ-ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 --------------~~d~~l~~~~-~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.........+ .....++.+++.+||+.+|++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 1245578999999999999999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=311.33 Aligned_cols=250 Identities=24% Similarity=0.398 Sum_probs=198.4
Q ss_pred cccccccCccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~ 550 (772)
+++.+.+|+|+||.||+|+... +..+++|...... .....+++.+|++++.++ +||||++++++|..
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA----TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc----CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3677889999999999997421 2357888765321 123346789999999999 89999999999987
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 616 (772)
.+ ..++||||+++|+|.+++.... ...++|..++.++.|++.||+|||+.+ |+||||||+||
T Consensus 90 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp~Ni 165 (334)
T cd05100 90 DG--PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLAARNV 165 (334)
T ss_pred CC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceE
Confidence 76 5799999999999999986432 235889999999999999999999988 99999999999
Q ss_pred EECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHH
Q 004124 617 YLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 684 (772)
Q Consensus 617 Lld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~ 684 (772)
|+++++.+||+|||+++.... ....|+|||.+....++.++|||||||++|||++ |..||... ...
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~ 243 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI--PVE 243 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC--CHH
Confidence 999999999999998764321 1135899999988899999999999999999999 88888532 334
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
++......+... ..+...+.++.+++.+||+.+|++||++.|+++.|+++.....
T Consensus 244 ~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 244 ELFKLLKEGHRM----------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred HHHHHHHcCCCC----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 444333222110 1122345678899999999999999999999999999875443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=299.50 Aligned_cols=238 Identities=25% Similarity=0.430 Sum_probs=192.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|.. .++.+++|...... ..+.+.+|+.++++++||||+++++++.... .++||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---~~~v~ 77 (254)
T cd05083 9 TLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-------TAQAFLEETAVMTKLHHKNLVRLLGVILHNG---LYIVM 77 (254)
T ss_pred eeeeeeccCCCCceEeccc-CCCceEEEeecCcc-------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC---cEEEE
Confidence 5667888999999999985 56778998875321 2357899999999999999999999987643 58999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence 9999999999997555556899999999999999999999988 99999999999999999999999998764322
Q ss_pred ---CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|++||.+.+..++.++|||||||++|||++ |+.||... +..+.......+.. . ......+
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~-~---------~~~~~~~ 223 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM--SLKEVKECVEKGYR-M---------EPPEGCP 223 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC--CHHHHHHHHhCCCC-C---------CCCCcCC
Confidence 1345889999988899999999999999999998 99998533 23333333222211 0 0112345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
.++.+++.+||+.+|++||+++++++.|++
T Consensus 224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 224 ADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 678899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=300.14 Aligned_cols=232 Identities=25% Similarity=0.372 Sum_probs=197.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++++|+|+||.||||.+ .+|..+|+|++.+.. ...++.+|+.+|.+.+.|++|++||.|.... ..++|
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-------DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIV 106 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-------DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIV 106 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-------hHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEee
Confidence 6889999999999999985 478999999887643 2457899999999999999999999766554 57999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc------
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------ 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~------ 633 (772)
||||.-|+..+.++ .+.+.++......|....++||+|||... -||||||+.||||+.+|.+||+|||.+.
T Consensus 107 MEYCGAGSiSDI~R-~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 107 MEYCGAGSISDIMR-ARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hhhcCCCcHHHHHH-HhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 99999999999986 35678999999999999999999999877 8999999999999999999999999864
Q ss_pred ---CCCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc------CCc
Q 004124 634 ---NTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV------DPT 704 (772)
Q Consensus 634 ---~~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~ 704 (772)
....+++.|||||+++.-.|+.++||||+|++..||..|++||..- .+++.++ .|.
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI---------------HPMRAIFMIPT~PPPT 248 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI---------------HPMRAIFMIPTKPPPT 248 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc---------------cccceeEeccCCCCCC
Confidence 3445788999999999999999999999999999999999999521 2222211 111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
. ..++..+.++.++++.|+.+.|++|-|+.++++.
T Consensus 249 F-~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 F-KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred C-CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1 2357788999999999999999999999988764
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=300.26 Aligned_cols=245 Identities=20% Similarity=0.351 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEcCC----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+...+|+|+||.||+|...+. ..+++|....... ....+.|.+|+.++++++||||+++++++.+. ..
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~ 81 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS----PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PV 81 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---Cc
Confidence 4567788999999999986432 4678887654321 23446799999999999999999999998754 35
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 82 WIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecCCCeEEccCceeeecc
Confidence 8999999999999998642 346899999999999999999999988 9999999999999999999999999875322
Q ss_pred C----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 A----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ~----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ....|+|||.+....++.++|||||||++||+++ |+.||..... .+.......+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~~~--------- 227 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIENGERL--------- 227 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCCcC---------
Confidence 1 1235899999888889999999999999999996 9999964322 2222222222111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..++.++.++.+++.+||..+|++||++.++++.|+++...
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11233456788999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=300.40 Aligned_cols=242 Identities=22% Similarity=0.345 Sum_probs=180.9
Q ss_pred ccCccceEEEEEEEEcCCc---EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLSSGV---EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~~---~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+|+|+||.||+|+..++. .+++|.+.... .....+.|.+|+.+++.++||||++++++|.... ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA----SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--PYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC----ChHHHHHHHHHHHHHhccCCcchhheEEEecCCC--ccEEEEe
Confidence 5789999999999865443 33444433221 1233568999999999999999999999998776 5699999
Q ss_pred ccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 562 YSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|+++|+|.++++... ....++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCCccEEecccccccccCcch
Confidence 999999999986432 234667778899999999999999988 9999999999999999999999999875321
Q ss_pred --------CCCccccchhhhcc-------CCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 637 --------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~-------~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.+...|+|||.... ..++.++|||||||++|||++ |+.||... ...+.......+.. ...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~--~~~~~~~~~~~~~~--~~~ 229 (268)
T cd05086 154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL--SDREVLNHVIKDQQ--VKL 229 (268)
T ss_pred hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHhhcc--ccc
Confidence 12346899998642 345789999999999999997 56677432 22333333333211 122
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.++.+. ....+.+.+++..|| .+|++||+++||++.|.
T Consensus 230 ~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLE---LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccC---CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 233322 224466788999999 57999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=297.15 Aligned_cols=241 Identities=18% Similarity=0.321 Sum_probs=195.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|++|.||+++.. +++.+++|++...... ....+.+.+|++++++++|+|++++++.+...+. ..++|
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv 78 (257)
T cd08223 3 CFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS---RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-LLYIV 78 (257)
T ss_pred eEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC---HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC-EEEEE
Confidence 56778899999999999965 5678999988643321 2334578899999999999999999998764432 46899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++++|.+++.......+++.++..++.+++.|++|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999999987545566899999999999999999999988 9999999999999999999999999875322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||...+..++.++|||||||++|||++|+.||... +..........+.. ...+.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~--~~~~~~~~~~~~~~----------~~~~~ 224 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK--DMNSLVYRIIEGKL----------PPMPK 224 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcCC----------CCCcc
Confidence 2345789999998889999999999999999999999998633 23333333332211 11223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++||++.|+++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 45578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=297.47 Aligned_cols=240 Identities=20% Similarity=0.374 Sum_probs=197.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+++.. +++.+++|.+...... ....+++.+|++++++++||||+++++++...+ ..++|
T Consensus 3 ~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv 77 (256)
T cd08218 3 VKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS---PKEREESRKEVAVLSNMKHPNIVQYQESFEENG--NLYIV 77 (256)
T ss_pred eEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC---hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--eEEEE
Confidence 45678899999999999854 6788999987643221 233467899999999999999999999998776 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++++|.+++.......+++.....++.|++.|++|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999999999986544456889999999999999999999988 99999999999999999999999998754322
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
+...|+|||...+..++.++|||||||++|||+||+.||... +..+.+.....+..+ ..+.
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--~~~~~~~~~~~~~~~----------~~~~ 223 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG--NMKNLVLKIIRGSYP----------PVSS 223 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC--CHHHHHHHHhcCCCC----------CCcc
Confidence 344689999998888999999999999999999999998633 334444444333211 1123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++||++.||++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 34567899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=317.43 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=189.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. +++.+|+|.+...... .....+.+.+|+++++.++||||+++++++.+++ ..++|
T Consensus 46 ~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~lv 121 (370)
T cd05621 46 DVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK--YLYMV 121 (370)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEE
Confidence 67788999999999999975 5778999987543211 1223456889999999999999999999998876 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ..+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 122 MEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999853 34788889999999999999999988 999999999999999999999999987642
Q ss_pred ------CCCCccccchhhhccC----CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 636 ------TAAKTGSAAMELLETS----AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~----~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
..++..|+|||.+... .++.++||||+||++|||+||+.||... +................ . +
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~-~--p-- 269 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--SLVGTYSKIMDHKNSLN-F--P-- 269 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCcccC-C--C--
Confidence 1256679999998653 3789999999999999999999999643 23333333332211110 0 0
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
.....+..+.+++.+|+..++.+ |+++.|+++.
T Consensus 270 --~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 270 --EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 01123567788999999865544 8899998875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=306.51 Aligned_cols=249 Identities=20% Similarity=0.259 Sum_probs=188.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. ++..+++|++...... ....+.+.+|+.++.+++||||+++++++..++ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 77 (285)
T cd07861 3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE---EGVPSTAIREISLLKELQHPNIVCLQDVLMQES--RLYLI 77 (285)
T ss_pred eEeeEecccCceEEEEEEECCCCcEEEEEEecccccc---CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--eEEEE
Confidence 46678899999999999965 6889999987643221 222356889999999999999999999998766 67999
Q ss_pred EeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 99997 68988875433 356899999999999999999999988 9999999999999999999999999875321
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC-----------
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP----------- 696 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~----------- 696 (772)
.+...|+|||.+.+ ..++.++|||||||++|||+||+.||...... .......... .+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI--DQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhcchhh
Confidence 22456899998754 45789999999999999999999999643221 1111111000 00
Q ss_pred ------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 ------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.................+++.+++.+||+.||++|||+.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000001111111224567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=297.15 Aligned_cols=241 Identities=17% Similarity=0.302 Sum_probs=196.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.++.+|.|+||.||.++. .++..+++|.+...... ....+++.+|++++++++|+||+++++++.+.+ ..++|
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~~ 77 (256)
T cd08221 3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS---EKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--TLLIE 77 (256)
T ss_pred eEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc---hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--eEEEE
Confidence 4567888999999999984 45788999987654322 233467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.......+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999999987544556899999999999999999999988 9999999999999999999999999875331
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|.|||...+..++.++||||||+++|||++|+.||... ...+.......+... ....
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~--~~~~~~~~~~~~~~~----------~~~~ 223 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT--NPLNLVVKIVQGNYT----------PVVS 223 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCC----------CCcc
Confidence 2345788999988888999999999999999999999999543 333444443332211 1113
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+.++.+++.+||..+|++||++.|+++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 345678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=295.61 Aligned_cols=238 Identities=26% Similarity=0.421 Sum_probs=192.0
Q ss_pred ccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 485 SFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
.+|.|+||.||++....++.+++|........ .....|.+|++++++++|+||+++++++.... ..++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP----DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--PIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCH----HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--CeEEEEEcCC
Confidence 57889999999999877899999987643321 23567999999999999999999999998876 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------- 637 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~------- 637 (772)
+++|.+++... ...+++.....++.+++.|++|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 76 ~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 76 GGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 99999998643 346789999999999999999999988 99999999999999999999999998764331
Q ss_pred ----CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 638 ----AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 638 ----~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
....|++||.+.+..++.++|||||||++|||+| |..||.... ........... ... ..+...
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--~~~~~~~~~~~-~~~---------~~~~~~ 220 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS--NQQTRERIESG-YRM---------PAPQLC 220 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC--HHHHHHHHhcC-CCC---------CCCccC
Confidence 1124899999988899999999999999999999 888885332 12222222111 100 112234
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
+.++.+++.+||..+|++||++.|+++.|++
T Consensus 221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 5689999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=303.11 Aligned_cols=246 Identities=20% Similarity=0.357 Sum_probs=191.3
Q ss_pred ccccccCccceEEEEEEEEc-CCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.++.+|+|+||.||+|++. ++. .+++|...... ......++.+|+.++++++||||++++|+|....
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--- 82 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT----GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT--- 82 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC---
Confidence 45678899999999999864 343 35666654322 1223456899999999999999999999997643
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++++||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCCCceEEccccccccc
Confidence 4799999999999999863 2346889999999999999999999988 999999999999999999999999988643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ....|++||.+.+..++.++|||||||++|||+| |+.||.... ..... ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~-~~~~~~~~~~----- 231 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIP-DLLEKGERLP----- 231 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHH-HHHHCCCCCC-----
Confidence 21 1236899999988899999999999999999998 889985332 22221 2222211110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.+..+...+.+++.+||..+|++||+++++++.|+++....
T Consensus 232 ----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 232 ----QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 11123456889999999999999999999999999875543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=309.73 Aligned_cols=186 Identities=19% Similarity=0.246 Sum_probs=152.1
Q ss_pred ccccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..++|+|+||+||+|+.. +++.+|+|.+..... ...+.+|++++++++||||+++++++........++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence 357899999999999864 457889998753321 2357789999999999999999998876544467999
Q ss_pred EeccCCCChhhhhhhh-------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEcc
Q 004124 560 FEYSPNGSLFEHLHIQ-------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISD 628 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~-------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kLsD 628 (772)
|||+. ++|.+++... ....+++.....++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 79 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred EeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 99995 5888876432 1235888899999999999999999988 9999999999999 4568999999
Q ss_pred ccCccCCC------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccC
Q 004124 629 FSFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSI 678 (772)
Q Consensus 629 FGla~~~~------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~ 678 (772)
||+++... .++..|+|||.+.+ ..++.++||||+||++|||+||+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99986432 22456899999866 4589999999999999999999999964
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=316.51 Aligned_cols=242 Identities=18% Similarity=0.236 Sum_probs=188.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. +++.+|+|.+....... ....+.+.+|+.+++.++||||+++++++.+++ ..++|
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~lv 121 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--YLYMV 121 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEE
Confidence 67889999999999999975 57788998876432211 223456889999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ..++...+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~ 196 (371)
T cd05622 122 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 196 (371)
T ss_pred EcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence 999999999998853 34788888899999999999999988 9999999999999999999999999875322
Q ss_pred -------CCCccccchhhhccC----CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 -------AAKTGSAAMELLETS----AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~----~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+... .++.++|||||||++|||++|+.||... +.......+........ ..
T Consensus 197 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~-~~---- 269 (371)
T cd05622 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLT-FP---- 269 (371)
T ss_pred cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCccc-CC----
Confidence 245679999998643 3789999999999999999999999643 33333333332211111 10
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
.....+.++.+++.+|+..++.+ |+++.|+++.
T Consensus 270 --~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 270 --DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred --CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 01234567888999999844433 7799988875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=324.28 Aligned_cols=252 Identities=18% Similarity=0.272 Sum_probs=185.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC------C
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED------E 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~------~ 552 (772)
+++.+.+|+|+||.||+|+.. +++.||||++.... ....+|+.+|++++|||||++++++... .
T Consensus 68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 367788999999999999964 67899999875321 1245799999999999999999986432 1
Q ss_pred CceEEEEEeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDF 629 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDF 629 (772)
....++||||+++ +|.+++.. .....+++.....++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+||
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeecc
Confidence 1246799999974 77777643 23456899999999999999999999988 9999999999999966 47999999
Q ss_pred cCccCCC--------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCC---
Q 004124 630 SFWNNTT--------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQP--- 696 (772)
Q Consensus 630 Gla~~~~--------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~--- 696 (772)
|+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .+.+...... ..+
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~--~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS--VDQLVRIIQVLGTPTED 293 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHH
Confidence 9986432 23456899998765 4689999999999999999999999964321 1111111110 000
Q ss_pred --------Cccc-----cCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 004124 697 --------LKDI-----VDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 745 (772)
Q Consensus 697 --------~~~~-----~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~ 745 (772)
+.++ ....+. .++...+.++.+|+.+||+.||++|||+.|+++. ++.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 0000 000000 1222345689999999999999999999999854 44443
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=318.10 Aligned_cols=236 Identities=24% Similarity=0.319 Sum_probs=189.5
Q ss_pred ccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEecc
Q 004124 485 SFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
.+|+|+||+||-|+. .+.+.+|||-+..+...+ ..-+.+||...++++|.|||+++|.|.+++ +.-|.||-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~-----~QPLhEEIaLH~~LrHkNIVrYLGs~senG--f~kIFMEqV 654 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE-----VQPLHEEIALHSTLRHKNIVRYLGSVSENG--FFKIFMEQV 654 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchh-----hccHHHHHHHHHHHhhHhHHHHhhccCCCC--eEEEEeecC
Confidence 478999999999994 566789999887665332 345789999999999999999999998877 668899999
Q ss_pred CCCChhhhhhhhccCCC--CHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccC------
Q 004124 564 PNGSLFEHLHIQEAEHL--DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNN------ 634 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l--~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~~------ 634 (772)
|||+|.++|+.+- +++ .+...-.+.+||++||.|||+.. |||||||-+|||++ -.|.+||+|||.++.
T Consensus 655 PGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 655 PGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred CCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCc
Confidence 9999999997542 334 66777889999999999999988 99999999999996 579999999997653
Q ss_pred ---CCCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 635 ---TTAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 ---~~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
...|+-.|||||++.. ..|..++|||||||++.||.||++||..-+.......+--+. ..-++.+
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy----------KvHP~iP 801 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY----------KVHPPIP 801 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce----------ecCCCCc
Confidence 2345668999999854 458999999999999999999999996332211111111000 1112456
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
++.+.+...+|.+|...||.+||++.++++.
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 7888999999999999999999999999864
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=308.28 Aligned_cols=247 Identities=18% Similarity=0.253 Sum_probs=187.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++.+|+|+||+||+|+.. ++..+|+|.+...... .....+.+|++++++++||||+++++++..++ ..++|
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 82 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--SLTLV 82 (309)
T ss_pred EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC----CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--eEEEE
Confidence 67788999999999999865 5778999988654322 12345778999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 83 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 83 FEYLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred EeCCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 999974 88888753 3345889999999999999999999988 9999999999999999999999999875321
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCc----cc----
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLK----DI---- 700 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~----~~---- 700 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+. .+......... .+.. .+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV--EDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 23456899998754 5688999999999999999999999964332 12111111100 0000 00
Q ss_pred --cC---Cc-----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 --VD---PT-----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 --~d---~~-----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ +. ..........++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 00 00011234567889999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=297.50 Aligned_cols=243 Identities=20% Similarity=0.303 Sum_probs=192.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccc-hhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~-~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|.|+||.||+|...+++.+|+|.+..+... .........+.+|++++++++|+||+++++++.+.+ ..++|
T Consensus 3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv 80 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--TISIF 80 (265)
T ss_pred cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC--eEEEE
Confidence 345678899999999999888999999987654321 112233467999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 999999999999853 345789999999999999999999988 9999999999999999999999999875321
Q ss_pred ------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.+...|+|||...+..++.++|||||||++|||+||+.||...+. .... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~-~~~~~~~~~~------- 227 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-LAAM-FYIGAHRGLM------- 227 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-HHHH-HHhhhccCCC-------
Confidence 133468899999888899999999999999999999999963321 1111 1111110111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.....++.+++.+||+.+|++||++.|+++
T Consensus 228 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 -PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1122334567889999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=301.62 Aligned_cols=245 Identities=18% Similarity=0.304 Sum_probs=195.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.. ++..+++|+...... ....+.+.+|+++++.++||||+++++++...+ ..++|
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 81 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK----SSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--NICMC 81 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc----chHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--EEEEE
Confidence 56788999999999999965 578888887754321 234568999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||+++|+|.+++.. .+.+++.....++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++...
T Consensus 82 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999988753 3468999999999999999999996 46 999999999999999999999999987532
Q ss_pred ----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC---------HHHHHHHHhhcCCCCccccC
Q 004124 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS---------LENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~---------~~~~~~~~~~~~~~~~~~~d 702 (772)
..++..|++||.+.+..++.++|||||||++||++||+.||...... ..++.........
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 230 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP------- 230 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-------
Confidence 13455789999998889999999999999999999999999743321 1122222221111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+.+. ....+.++.+++.+||+.||++||++.|+++...-+
T Consensus 231 ~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 231 PRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred CCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 0010 122556789999999999999999999999864333
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=302.43 Aligned_cols=233 Identities=23% Similarity=0.380 Sum_probs=179.7
Q ss_pred ccCccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 485 SFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+|.|+||.||+|.... ...+++|..... .....+.|.+|+.+++.++|||||++++++..++ ..
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~ 74 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD--ES 74 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch-----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--Cc
Confidence 57899999999998642 223566655322 1233467889999999999999999999998766 56
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--------EEEcc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--------AKISD 628 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--------~kLsD 628 (772)
++||||+++|+|.++++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +|++|
T Consensus 75 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred EEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEecc
Confidence 9999999999999998643 346899999999999999999999988 999999999999987765 69999
Q ss_pred ccCccCCC-----CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCC-CcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 629 FSFWNNTT-----AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 629 FGla~~~~-----~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
||++.... .+...|+|||.+.+ ..++.++|||||||++|||++|. .|+.... ..... ........
T Consensus 152 ~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~--~~~~~-~~~~~~~~----- 223 (258)
T cd05078 152 PGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD--SQKKL-QFYEDRHQ----- 223 (258)
T ss_pred cccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc--HHHHH-HHHHcccc-----
Confidence 99875432 23457999999876 45899999999999999999985 5553221 11111 11111111
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.+.....++.+++.+||+.+|++|||++++++.|
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 224 ------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1112335688999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=301.53 Aligned_cols=240 Identities=20% Similarity=0.313 Sum_probs=190.7
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh----hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~----~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+...+|.|+||.||+|... ++..+++|.+........ .....+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 81 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD--HL 81 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--cc
Confidence 3456788999999999864 578899998765432211 1223467899999999999999999999998876 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999853 356889999999999999999999988 9999999999999999999999999876443
Q ss_pred ---------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 637 ---------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 637 ---------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.+...|+|||.+.+..++.++|||||||++|||+||+.||..... .......... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~-------~ 228 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--LQAIFKIGEN-------A 228 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--HHHHHHHhcc-------C
Confidence 123468899999888899999999999999999999999964321 1111111111 0
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ ..+.....++.+++.+||+.||++||++.|+++
T Consensus 229 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 SP---EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CC---cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 122345577889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=316.56 Aligned_cols=243 Identities=20% Similarity=0.284 Sum_probs=197.9
Q ss_pred hcccccccccCccceEEEEEEEEcCCcEE-EEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLSSGVEI-AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~~~~~v-aVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++|.+|||.+|.|+||.||||+.++...+ |.|++..++ ....++|+-||++|..++||+||++++.|+..+ .
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks-----eEELEDylVEIeILa~CdHP~ivkLl~ayy~en--k 103 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-----EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN--K 103 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc-----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC--c
Confidence 35668999999999999999997755444 445554443 334578999999999999999999999776666 5
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc--
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-- 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~-- 633 (772)
.+|..|||.||-....+-. -...|...++..++++++.||.|||+.+ |||||||+.|||+.-+|.++|+|||.+.
T Consensus 104 LwiliEFC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLDGDIRLADFGVSAKN 180 (1187)
T ss_pred eEEEEeecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEecCcEeeecccccccc
Confidence 7999999999999877643 3567999999999999999999999998 9999999999999999999999999853
Q ss_pred -------CCCCCCccccchhhh-----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 634 -------NTTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 634 -------~~~~~~~~~~aPE~~-----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
....|+++|||||+. ....|+.++|||||||+|.||..+.+|.. ..+....+..+.+.+.|. +.
T Consensus 181 ~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh--elnpMRVllKiaKSePPT--Ll 256 (1187)
T KOG0579|consen 181 KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH--ELNPMRVLLKIAKSEPPT--LL 256 (1187)
T ss_pred hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc--ccchHHHHHHHhhcCCCc--cc
Confidence 345688999999975 56789999999999999999999999874 334444444444433221 11
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
-+......+.+++.+|+..+|..||++.++++
T Consensus 257 ------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 ------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 23466788999999999999999999999875
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=313.09 Aligned_cols=250 Identities=19% Similarity=0.294 Sum_probs=188.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+++.. ++..+|+|++...... ......+.+|+.+++.++||||+++++++...+. .
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN---QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred eEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc---hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 367889999999999999864 6889999988643211 2234578899999999999999999999865432 1
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++ +|...++ ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 46999999965 6666653 24788888999999999999999988 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH------------------
Q 004124 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS------------------ 688 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~------------------ 688 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ...|..
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCcHHHHHHHHH
Confidence 32 234569999999999999999999999999999999999964321 111111
Q ss_pred ---HHhhcCCCCc-----c----ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 689 ---EYLKGEQPLK-----D----IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 689 ---~~~~~~~~~~-----~----~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+........ + ...+...........++.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000 0 00000001111234678899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=310.25 Aligned_cols=245 Identities=17% Similarity=0.255 Sum_probs=189.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.+ .++.+|+|.+...... .......|.+|+.++..++|+||+++++++.+.+ ..++|
T Consensus 4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 79 (332)
T cd05623 4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML--KRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLV 79 (332)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH--HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--EEEEE
Confidence 56788999999999999975 4677889887543211 1223456889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999999632 346899999999999999999999988 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 ------TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..++..|+|||.+. ...++.++|||||||++|||++|+.||... +..+............ .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~------~ 228 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERF------Q 228 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC--CHHHHHHHHhCCCccc------c
Confidence 23456799999875 356889999999999999999999999643 3334333333321111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
.......++.++.+++.+|+..++++ |+++.|+++.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11111234567888999988654444 6899998765
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=309.01 Aligned_cols=245 Identities=18% Similarity=0.264 Sum_probs=188.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.. +++.+|+|++..... ......+.|.+|+.++..++|+||+++++++.+++ ..++|
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 79 (331)
T cd05597 4 EILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAFQDEN--NLYLV 79 (331)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC--eEEEE
Confidence 57788999999999999965 578999998864221 11223456889999999999999999999998876 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999853 2456889999999999999999999988 9999999999999999999999999875321
Q ss_pred -------CCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -------AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.. ..++.++|||||||++|||++|+.||... +..+............ .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~--~~~~~~~~i~~~~~~~-~----- 228 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKEHF-Q----- 228 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC--CHHHHHHHHHcCCCcc-c-----
Confidence 24567999999852 46788999999999999999999999633 3333333333221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCC--CCCCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDP--KQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP--~~RPs~~evl~~ 740 (772)
+.......++++.+++.+|+..++ ..||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 111112245677888888775433 347899998865
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=299.98 Aligned_cols=238 Identities=18% Similarity=0.269 Sum_probs=193.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+..+|.|+||.||+|+.. ++..+++|.+..... ......+.+|++++++++||||+++++++.++. ..++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 79 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--KLWI 79 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEE
Confidence 456788999999999999965 578899988764321 223467999999999999999999999998876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||+++|+|.+++.. ..+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 80 IMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 9999999999998852 45888899999999999999999988 99999999999999999999999998754322
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|.|||.+.+..++.++|||||||++|||+||+.||..... .......... ......
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~----------~~~~~~ 222 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP--MRVLFLIPKN----------NPPTLT 222 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh--HhHhhhhhcC----------CCCCCc
Confidence 23467999999888899999999999999999999999863321 1111111111 011233
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.+|++||++.|+++.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 4567789999999999999999999999765
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=300.57 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=189.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|+|+||.||+|+.. +++.+++|++...... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 4 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v 78 (286)
T cd07847 4 EKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD---PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR--KLHLV 78 (286)
T ss_pred eeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC---ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--EEEEE
Confidence 56778899999999999976 5888999987643211 123356889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++++.|..++. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 79 FEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred EeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99999988877763 3346899999999999999999999988 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHH-HHHHhhc-----------CCCC
Q 004124 638 -------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENW-ASEYLKG-----------EQPL 697 (772)
Q Consensus 638 -------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~-~~~~~~~-----------~~~~ 697 (772)
+...|+|||.+.+ ..++.++|||||||++|||+||+.||.........+ ....... ....
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 2346889998765 568899999999999999999999996433211111 1111100 0000
Q ss_pred ccccCCc------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 KDIVDPT------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 ~~~~d~~------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+. .....+..+..+.+++.+||+.+|++||++.|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000 00111233567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=311.98 Aligned_cols=234 Identities=20% Similarity=0.255 Sum_probs=181.8
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcCCCceEEEEEe
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+|+|+||+||+|+.. +++.+|+|++..+.... ......+..|..++.+. +||||+++++++...+ ..++|||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA--KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--DLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh--hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--eEEEEEc
Confidence 578999999999865 58899999886433211 12233455677777665 6999999999998877 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC------
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------ 635 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------ 635 (772)
|+++|+|.+++. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 77 ~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~ 152 (330)
T cd05586 77 YMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT 152 (330)
T ss_pred CCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence 999999998885 3456899999999999999999999988 999999999999999999999999987532
Q ss_pred ---CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 636 ---TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 636 ---~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
..++..|+|||.+.+. .++.++|||||||++|||+||+.||... +..+.......+...+. ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~~----------~~~ 220 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE--DTQQMYRNIAFGKVRFP----------KNV 220 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC--CHHHHHHHHHcCCCCCC----------Ccc
Confidence 1245679999998654 5899999999999999999999999643 33333333333221111 012
Q ss_pred HHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPS----MRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs----~~evl~ 739 (772)
...++.+++.+||+.||++||+ +.|+++
T Consensus 221 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 221 LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 3467788999999999999984 555544
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=333.75 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=190.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.||.|+||+||+|+.. .+..+++|.+...... ......|..|+.++.+++|||||++++++........+||
T Consensus 16 eIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~---e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 16 EVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK---EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 78899999999999999965 4567788877644322 2345679999999999999999999998876544467999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCeEeeCCCCCCeEECC------------
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLT-----PPIAHRNLQSSSIYLTE------------ 620 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~-----~~IvHrDLKp~NILld~------------ 620 (772)
|||+++|+|.++|... ....+++..++.|+.||+.||+|||+.+ .+||||||||+||||+.
T Consensus 93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~ 172 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence 9999999999998643 2356999999999999999999999854 35999999999999964
Q ss_pred -----CCcEEEccccCccCCC--------CCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004124 621 -----DYAAKISDFSFWNNTT--------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 621 -----~~~~kLsDFGla~~~~--------~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
...+||+|||+++... .++..|+|||.+.. ..++.++||||||||||||+||+.||.... ....
T Consensus 173 ~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-~~~q 251 (1021)
T PTZ00266 173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-NFSQ 251 (1021)
T ss_pred cccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-cHHH
Confidence 3458999999876432 34668999999853 458899999999999999999999996432 3333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
++...... ..+. . ...+.++.+||..||+.+|.+||++.|++.
T Consensus 252 li~~lk~~-p~lp------i----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 252 LISELKRG-PDLP------I----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHhcC-CCCC------c----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 33222211 1100 0 123467889999999999999999999984
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=300.50 Aligned_cols=240 Identities=24% Similarity=0.311 Sum_probs=190.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|.|+||.||+|+.. ++..+++|...... ....+.+.+|++++++++||||+++++++..++ ..++
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 86 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--KLWI 86 (292)
T ss_pred hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--eEEE
Confidence 367888999999999999975 47888888876432 233567889999999999999999999988766 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++++|..++... ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 87 MIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred EEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 99999999998877532 356899999999999999999999988 9999999999999999999999999865321
Q ss_pred -------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.+...|+|||.+. ...++.++|||||||++|||+||+.||.... ..+..........+ ..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~--~~---- 235 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSEPP--TL---- 235 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc--HHHHHHHHhcCCCc--cC----
Confidence 1334689999874 3457889999999999999999999985432 22222222221111 00
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+.....++.+++.+||+.+|++||++.|+++
T Consensus 236 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 --SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 112234567889999999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=295.63 Aligned_cols=243 Identities=17% Similarity=0.223 Sum_probs=189.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|+|+||.||+|+.. ++..|++|.+.............+.+.+|++++++++||||+++++++.+......++|
T Consensus 5 ~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v 84 (265)
T cd06652 5 RLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIF 84 (265)
T ss_pred eEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEE
Confidence 45667889999999999864 58899999875432222222344678999999999999999999998876543357899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++....+++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 85 MEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 999999999999853 245788889999999999999999988 9999999999999999999999999875321
Q ss_pred ---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|+|||.+.+..++.++|||||||++|||++|+.||.... .... ....... + ....
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-~~~~-~~~~~~~--~-------~~~~ 229 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-AMAA-IFKIATQ--P-------TNPV 229 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-hHHH-HHHHhcC--C-------CCCC
Confidence 13346899999988889999999999999999999999995331 1111 1111111 1 1111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+......+.+++.+||. +|++||+++||++
T Consensus 230 ~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 230 LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 234556778889999995 8999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=295.48 Aligned_cols=252 Identities=21% Similarity=0.296 Sum_probs=203.1
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|.|.-|+||.++... +..+|+|++.+..... .....+...|-+||+.++||.++.||+.++.+. ..|+|
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~--rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~--~~cl~ 155 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS--RKKLKRAQTEREILSLLDHPFLPTLYASFETDK--YSCLV 155 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh--hhHHHHHHHHHHHHHhcCCCccchhhheeeccc--eeEEE
Confidence 567889999999999999764 4789999987655433 333456778889999999999999999999887 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
||||+||+|..+++.+..+.++...+..++..|.-||+|||-.| ||.|||||+||||.++|++-|+||-++..
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 99999999999998888889999999999999999999999999 99999999999999999999999975310
Q ss_pred ---------------------------------C---------------------------CCCCccccchhhhccCCCC
Q 004124 635 ---------------------------------T---------------------------TAAKTGSAAMELLETSAVD 654 (772)
Q Consensus 635 ---------------------------------~---------------------------~~~~~~~~aPE~~~~~~~s 654 (772)
. ..|+..|.|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0012247799999999999
Q ss_pred CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC-
Q 004124 655 LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS- 733 (772)
Q Consensus 655 ~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs- 733 (772)
.++|+|+|||++|||+.|+.||.+.+. .+....++....... . .+..+..+.+||++.|.+||++|..
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~--~~Tl~NIv~~~l~Fp--------~-~~~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNN--KETLRNIVGQPLKFP--------E-EPEVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCc--hhhHHHHhcCCCcCC--------C-CCcchhHHHHHHHHHhccChhhhhcc
Confidence 999999999999999999999975443 233334443322111 1 1256678999999999999999987
Q ss_pred ---HHHHHHHHHhhhhcCCCCCCCCCCCchHH
Q 004124 734 ---MRGIAAKLKEITAMEPDGATPKLSPLWWA 762 (772)
Q Consensus 734 ---~~evl~~L~~i~~~~~~~~~p~~~~~~~~ 762 (772)
+.||-+ +|.+....||
T Consensus 383 ~rGA~eIK~-------------HpFF~gVnWa 401 (459)
T KOG0610|consen 383 KRGAAEIKR-------------HPFFEGVNWA 401 (459)
T ss_pred ccchHHhhc-------------CccccCCChh
Confidence 555532 4566666666
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=298.42 Aligned_cols=243 Identities=24% Similarity=0.426 Sum_probs=191.8
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++..+|+|+||.||+|+.+. ...+++|....... ....+.|.+|++++++++|+||+++++++.+.+
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 81 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD----ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE-- 81 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc----hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC--
Confidence 567889999999999999642 35677876643321 224567999999999999999999999998766
Q ss_pred eEEEEEeccCCCChhhhhhhhcc-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA-------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~-------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLs 627 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|++
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCCCcEEEc
Confidence 56999999999999999864431 25899999999999999999999988 9999999999999999999999
Q ss_pred cccCccCCCC----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 628 DFSFWNNTTA----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 628 DFGla~~~~~----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
|||+++.... .+..|++||...+..++.++||||||+++|||++ |..||... ...........+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~--~~~~~~~~~~~~~~~ 237 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGL--SDEEVLNRLQAGKLE 237 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--chHHHHHHHHcCCcC
Confidence 9998753321 1234899999888888999999999999999999 78888432 222233322222111
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.. ....++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 238 ~~---------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 238 LP---------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 10 11234467889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=294.63 Aligned_cols=237 Identities=24% Similarity=0.324 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+... +..+++|.+.... ..+++.+|++++++++||||+++++++.... ..+++
T Consensus 6 ~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~ 76 (256)
T cd06612 6 DILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIV 76 (256)
T ss_pred hhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--cEEEE
Confidence 556778899999999999765 7889998875432 1468999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 77 MEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 999999999999853 3456899999999999999999999988 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
+...|++||.+.+..++.++|||||||++|||+||+.||...... ........ .. .+ ....+.
T Consensus 154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~~~~~~~~--~~-----~~-~~~~~~ 223 (256)
T cd06612 154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--RAIFMIPN--KP-----PP-TLSDPE 223 (256)
T ss_pred cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--hhhhhhcc--CC-----CC-CCCchh
Confidence 234689999998889999999999999999999999999633211 11111000 00 00 011223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++||++.|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 45567899999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=311.84 Aligned_cols=249 Identities=18% Similarity=0.274 Sum_probs=187.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~ 555 (772)
++++.+|+|+||.||++... .++.+|||++...... ....+.+.+|+.+++.++||||+++++++..... ..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred eEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC---hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 67788999999999999854 6788999987643211 2234578899999999999999999998865431 24
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred eEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 6999999964 6766663 34788889999999999999999988 999999999999999999999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH-------------------
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS------------------- 688 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~------------------- 688 (772)
. .++..|+|||.+.+..++.++|||||||++|||++|+.||...+. ...+..
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 2 235578999999988999999999999999999999999964321 111110
Q ss_pred --HHhhcCCCCccccCCc-----c----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 689 --EYLKGEQPLKDIVDPT-----L----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 689 --~~~~~~~~~~~~~d~~-----l----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..............+. . .........++.+++.+|++.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0110000000000000 0 01112234578899999999999999999999975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=314.98 Aligned_cols=250 Identities=17% Similarity=0.188 Sum_probs=187.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ceE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~~ 556 (772)
++++.+|+|+||.||+|.. .+++.||+|++...... ....+++.+|+++++.++||||+++++++...+. ...
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN---LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEeccccccc---hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 4677889999999999996 47889999987543211 2234578899999999999999999999876531 146
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++|+||+. ++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 80 YVVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 99999996 58887774 3456899999999999999999999988 9999999999999999999999999876321
Q ss_pred ----------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCCCcc----
Q 004124 637 ----------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLKD---- 699 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~---- 699 (772)
.++..|+|||.+.+. .++.++|||||||++|||++|+.||...+. .+....+.. +.....+
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP--IQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHh
Confidence 124468999998764 579999999999999999999999964331 111111100 0000000
Q ss_pred -----------ccC-C---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 -----------IVD-P---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 -----------~~d-~---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
... + ..........+++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000 0 0001112235678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=306.61 Aligned_cols=185 Identities=19% Similarity=0.265 Sum_probs=150.9
Q ss_pred cccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.++|+|+||+||+|+.. ++..+|+|.+.... ....+.+|++++++++||||+++++++........++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 46889999999999965 34678888775322 123578899999999999999999998754444679999
Q ss_pred eccCCCChhhhhhhh-------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEccc
Q 004124 561 EYSPNGSLFEHLHIQ-------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDF 629 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~-------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kLsDF 629 (772)
||++ ++|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+||
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9996 4787776422 1235888999999999999999999988 9999999999999 56689999999
Q ss_pred cCccCCC------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccC
Q 004124 630 SFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSI 678 (772)
Q Consensus 630 Gla~~~~------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~ 678 (772)
|+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9986432 12446899999865 4589999999999999999999999964
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=295.95 Aligned_cols=237 Identities=19% Similarity=0.302 Sum_probs=191.6
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|.|+||.||+|+.. ++..+++|.+....... ....+.+.+|++++++++||||+++++++.+++ ..++|+||++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE--TGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--YIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh--hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--ccEEEEecCC
Confidence 578999999999975 47889999886543221 234567999999999999999999999988776 5799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------- 637 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~------- 637 (772)
+|+|.+++.. ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++....
T Consensus 77 ~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~ 152 (262)
T cd05572 77 GGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF 152 (262)
T ss_pred CCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccc
Confidence 9999999863 345889999999999999999999988 99999999999999999999999998765433
Q ss_pred -CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHH
Q 004124 638 -AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 716 (772)
Q Consensus 638 -~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l 716 (772)
+...|++||.+....++.++||||||+++|||++|+.||.....+..+.......+.... .++.....++
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 223 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL---------EFPNYIDKAA 223 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC---------CCCcccCHHH
Confidence 345689999998888999999999999999999999999755433444444443221111 1222235788
Q ss_pred HHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 717 LVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 717 ~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
.+++.+||+.+|++||+ ++|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 99999999999999999 566554
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=293.48 Aligned_cols=240 Identities=22% Similarity=0.347 Sum_probs=194.3
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||++.. .++..+++|.+..... .....+.+.+|++++++++||||+++++.+...+ ..++|
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 77 (256)
T cd08220 3 EKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM---TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--ALMIV 77 (256)
T ss_pred eEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc---ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC--EEEEE
Confidence 4567889999999999986 4678899998865432 2234567999999999999999999999888766 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~~~-- 636 (772)
|||+++++|.+++.......+++..+.+++.+++.|++|||+++ |+||||||+||+++++ ..+||+|||++....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999999997555556899999999999999999999988 9999999999999854 568999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||.+....++.++||||||+++|||++|+.||...+ ............. . ..+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~--~--------~~~~ 223 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN--LPALVLKIMSGTF--A--------PISD 223 (256)
T ss_pred ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc--hHHHHHHHHhcCC--C--------CCCC
Confidence 23457899999988889999999999999999999999996432 2333333322211 0 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 34567889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=299.49 Aligned_cols=242 Identities=20% Similarity=0.319 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. ++..+++|.+.... .......+.+|++++.+++|+||+++++++...+ ..++|
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 77 (286)
T cd06622 4 EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL----DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--AVYMC 77 (286)
T ss_pred hhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--eEEEE
Confidence 56788999999999999975 78899999876432 1223467899999999999999999999988766 67999
Q ss_pred EeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++++|..++.... ...+++..+..++.+++.||.|||+ ++ |+||||||+||+++.++.+||+|||++....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 155 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA 155 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence 99999999998886421 3468999999999999999999996 56 9999999999999999999999999875432
Q ss_pred ------CCCccccchhhhccC------CCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCCccccCC
Q 004124 637 ------AAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~------~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.+...|+|||.+.+. .++.++|||||||++|||+||+.||...... ..........+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------- 226 (286)
T cd06622 156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD--------- 226 (286)
T ss_pred CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC---------
Confidence 234468999987543 3588999999999999999999999643221 111111111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+..+..++.+++.+||+.+|++||++.++++.
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 -PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 112233466788999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=293.98 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=191.3
Q ss_pred cccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----
Q 004124 482 IIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---- 553 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---- 553 (772)
+.+.+|+|+||.||+|.+. ++..+++|.+...... ....+++.+|++++++++||||+++++++...+.
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS---SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC---hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 4567889999999999864 3678999988643321 2234678999999999999999999998865321
Q ss_pred ceEEEEEeccCCCChhhhhhhhc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
...++++||+++|+|.+++.... ...+++....+++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCCCCEEECcc
Confidence 12478999999999998875321 235788999999999999999999988 999999999999999999999999
Q ss_pred cCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 630 SFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+++.... ....|++||......++.++|||||||++|||++ |+.||.... ..+......... ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~-~~ 234 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYLIKGN-RL 234 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHHHcCC-cC
Confidence 98764321 1235789999888889999999999999999999 888885332 222222222221 11
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
. .....+.++.+++.+||+.+|++||++.|+++.|+++
T Consensus 235 ~---------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 K---------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred C---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 1123446789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=311.17 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=187.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~ 555 (772)
++++.+|+|+||.||+|+.. .++.+|||++...... ....+.+.+|+.+++.++||||+++++++...+. ..
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred eEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC---chhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 67788999999999999854 6788999987643211 2234568899999999999999999998764321 24
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++ +|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred EEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 6999999964 7777663 34788899999999999999999988 999999999999999999999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-C----------
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-P---------- 696 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~---------- 696 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..+....++.... +
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--HIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 2 24557899999999999999999999999999999999996432 1121111111000 0
Q ss_pred -----------Ccc-----ccC----CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 -----------LKD-----IVD----PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 -----------~~~-----~~d----~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
... ... +...........++.+++.+|++.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 000 00000111224578899999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=295.07 Aligned_cols=260 Identities=21% Similarity=0.260 Sum_probs=193.8
Q ss_pred cccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc---CCCceEE
Q 004124 482 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE---DEPFTRM 557 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~---~~~~~~~ 557 (772)
.++.+|.|+||.|..+.. .+|..||+|++...-. .....++-.+|+++|+.++|+||+.+++++.. ++....|
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~---~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE---NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh---chHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 367899999999999985 4789999999863211 12345678899999999999999999999875 2223589
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
+|+|+| .-+|...++ ..+.++......+.+|+++||.|+|+.+ |+||||||+|+|++.+...||+|||+|+....
T Consensus 103 iV~elM-etDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 103 LVFELM-ETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred EehhHH-hhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEeccccceeeccc
Confidence 999999 558988885 3445888888999999999999999999 99999999999999999999999999987732
Q ss_pred -----------CCccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCC---------
Q 004124 638 -----------AKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQ--------- 695 (772)
Q Consensus 638 -----------~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~--------- 695 (772)
.+..|.|||.+ ....||.+.||||.|||+.||++|+.-|.+.+. +..+.+...+....
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 13356799986 567899999999999999999999988864321 11111111110000
Q ss_pred --------CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhcCC
Q 004124 696 --------PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEP 749 (772)
Q Consensus 696 --------~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~~~ 749 (772)
.....-........+.......+|+.+++..||.+|+|++|.++. |........
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 000000000111223455788999999999999999999999865 455544433
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=317.05 Aligned_cols=242 Identities=14% Similarity=0.175 Sum_probs=183.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||.||+|+.. .++.|+||.... ..+.+|+++|++++|+|||++++++...+ ..++|
T Consensus 172 ~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--~~~lv 238 (461)
T PHA03211 172 AIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVRVVGG--LTCLV 238 (461)
T ss_pred EEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEE
Confidence 67788999999999999975 467888885321 24678999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+. |+|.+++.. ....++|..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 239 ~e~~~-~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 239 LPKYR-SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred EEccC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 99994 799888753 2346999999999999999999999988 999999999999999999999999987532
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC------CHHHHHHHHhhcCCC---Ccc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG------SLENWASEYLKGEQP---LKD 699 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~------~~~~~~~~~~~~~~~---~~~ 699 (772)
..++..|+|||.+.+..++.++|||||||++|||++|..|+..... ........+...... ...
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 1246679999999999999999999999999999998766532111 111111111111100 000
Q ss_pred ccC----------------Cccc--ccc--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 IVD----------------PTLK--SFQ--ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d----------------~~l~--~~~--~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... +... .+. .....++.+|+.+||+.||++|||+.|+++
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 000 0000 000 012346888999999999999999999986
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=292.05 Aligned_cols=240 Identities=22% Similarity=0.326 Sum_probs=192.0
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
...+|.|+||.||+|... ++..+++|.+.............+.+.+|++++++++|+||+++++++.... ..++|+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 82 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED--NLYIFLE 82 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC--eEEEEEE
Confidence 356788999999999976 7889999988765433333445578999999999999999999999998776 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
|+++++|.+++.. ...+++..+..++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 83 LVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred ecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 9999999999853 345889999999999999999999988 9999999999999999999999999875322
Q ss_pred ---CCCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 637 ---AAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
.+...|++||.+.... ++.++|||||||++|||++|+.||.... ........... ... ...++..
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~-~~~--------~~~~~~~ 227 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE--GVAAVFKIGRS-KEL--------PPIPDHL 227 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc--HHHHHHHHHhc-ccC--------CCcCCCc
Confidence 2345689999987666 8999999999999999999999996433 12222221110 111 1122334
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+++.+++.+||+.+|++||++.+++.
T Consensus 228 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 228 SDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 567889999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=297.76 Aligned_cols=240 Identities=23% Similarity=0.320 Sum_probs=191.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.. ++..+++|...... ....+.|.+|++++++++||||+++++++..+. ..++|
T Consensus 8 ~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (280)
T cd06611 8 EIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-----EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--KLWIL 80 (280)
T ss_pred HHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEE
Confidence 67788999999999999974 57889999876442 223467999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 81 IEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred eeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 999999999998853 2346899999999999999999999988 9999999999999999999999999864322
Q ss_pred ------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 ------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|++||.+. ...++.++|||||||++|||++|+.||.... ..+.......+..+. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~--~----- 228 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN--PMRVLLKILKSEPPT--L----- 228 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC--HHHHHHHHhcCCCCC--c-----
Confidence 2345689999874 3457889999999999999999999995432 222222222221110 0
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+...+.++.+++.+||+.+|++||++.++++.
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 -DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 1122345678899999999999999999999763
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=300.85 Aligned_cols=251 Identities=19% Similarity=0.249 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|... +++.+++|.+...............+..|++++++++|+||+++++++.+.+ ..++|
T Consensus 3 ~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv 80 (298)
T cd07841 3 EKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS--NINLV 80 (298)
T ss_pred eeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--EEEEE
Confidence 45567889999999999965 6889999998765433222334456788999999999999999999998866 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 999999986432 36899999999999999999999998 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCC----------Cc
Q 004124 638 -------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQP----------LK 698 (772)
Q Consensus 638 -------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~----------~~ 698 (772)
....|+|||.+.+ ..++.++|||||||++|||++|..||.... ..... ...... ..+ ..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-DIDQL-GKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-cHHHH-HHHHHHcCCCchhhhhhccccc
Confidence 2235889998754 567899999999999999999977775433 22211 111110 000 00
Q ss_pred cc------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 DI------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ~~------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. ..............++.+++.+||+.+|++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00 000011112334678899999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=297.99 Aligned_cols=237 Identities=20% Similarity=0.295 Sum_probs=187.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+. .++..+|+|.+.... .....++|.+|++++.+++||||+++++++...+ ..++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 77 (279)
T cd06619 4 QYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--RISIC 77 (279)
T ss_pred hheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--EEEEE
Confidence 4667889999999999985 567889999875432 1233467999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|..+. .+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 78 ~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 78 TEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred EecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 9999999996542 3678888899999999999999988 9999999999999999999999999876422
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-----HHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-----LENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||...... ...+......... +...
T Consensus 150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~- 221 (279)
T cd06619 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-------PVLP- 221 (279)
T ss_pred ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-------CCCC-
Confidence 2345789999998888999999999999999999999999632211 1111111111100 1110
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......++.+++.+||+.+|++||+++|+++.
T Consensus 222 -~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 -VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11234578899999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=307.84 Aligned_cols=245 Identities=18% Similarity=0.252 Sum_probs=189.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++.. +++.+|+|.+...... .......+.+|+.++..++|+||+++++++.+.+ ..++|
T Consensus 4 ~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~--~~~lv 79 (331)
T cd05624 4 EIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML--KRAETACFREERNVLVNGDCQWITTLHYAFQDEN--YLYLV 79 (331)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH--hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEE
Confidence 56788999999999999965 5778999987643211 1223456889999999999999999999998876 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999998642 346889999999999999999999988 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 ------TAAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||... +..+............ .
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~------~ 228 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHEERF------Q 228 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC--CHHHHHHHHHcCCCcc------c
Confidence 124567999998865 56889999999999999999999999643 2333333333221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
........++++.+++.+|+..++++ |++++++.+.
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11111234567888999998865544 4678887653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=300.79 Aligned_cols=245 Identities=19% Similarity=0.229 Sum_probs=193.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+++.. .++.|++|.+....... ....+.+.+|+++++.++||||+++++.+..++ ..++|
T Consensus 4 ~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 79 (305)
T cd05609 4 ETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL--RNQIQQVFVERDILTFAENPFVVSMFCSFETKR--HLCMV 79 (305)
T ss_pred eEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh--HHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC--EEEEE
Confidence 56778899999999999965 56789999876443211 223457889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 80 MEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999853 346899999999999999999999988 999999999999999999999999987521
Q ss_pred --------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 636 --------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 --------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
..+...|+|||.+....++.++|||||||++|||+||+.||... ...++......+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--~~~~~~~~~~~~~~ 233 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--TPEELFGQVISDDI 233 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccc
Confidence 11234689999988888999999999999999999999999633 33344444333221
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
.. +. .....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 234 ~~-----~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 234 EW-----PE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CC-----CC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11 10 011345678899999999999999997666655544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=301.01 Aligned_cols=238 Identities=21% Similarity=0.313 Sum_probs=192.2
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||+||+|.. .+++.+++|.+..... ...+.+.+|+++++.++||||+++++++...+ ..++|
T Consensus 22 ~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 94 (296)
T cd06655 22 TRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-----PKKELIINEILVMKELKNPNIVNFLDSFLVGD--ELFVV 94 (296)
T ss_pred EEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-----chHHHHHHHHHHHHhcCCCceeeeeeeEecCc--eEEEE
Confidence 5678899999999999985 5788999998865432 22457889999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++|+|.+++.. ..+++.++..++.+++.|++|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 95 MEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred EEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 999999999998742 35899999999999999999999988 9999999999999999999999999875322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|+|||.+.+..++.++|||||||++|||+||+.||..... ............+ .. ..+.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--~~~~~~~~~~~~~--~~------~~~~ 239 (296)
T cd06655 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRALYLIATNGTP--EL------QNPE 239 (296)
T ss_pred ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCc--cc------CCcc
Confidence 234468999999888899999999999999999999999964432 2222222111111 00 1123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.+++.+||..||++||++.+++..
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 345678899999999999999999999853
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=298.66 Aligned_cols=249 Identities=20% Similarity=0.286 Sum_probs=194.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.++.+|.|++|.||+|... +++.+++|.+..... .....++.+|++++++++||||+++++++........++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN----PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc----hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 45678899999999999974 577888887764321 2345679999999999999999999999876554467999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++++|.+++... ....+++.....++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999999887532 3456888999999999999999999988 9999999999999999999999999875322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC---CHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG---SLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|++||.+.+..++.++||||+||++|||+||+.||..... ...+.......... ....+. ..
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~ 233 (287)
T cd06621 158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--PELKDE--PG 233 (287)
T ss_pred cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc--hhhccC--CC
Confidence 234568999999888999999999999999999999999975421 22222222211111 111000 00
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+++.+++.+||+.+|++|||+.|+++
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 01224567899999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=290.78 Aligned_cols=241 Identities=21% Similarity=0.260 Sum_probs=191.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+|... ++..+++|.+..... ...+.+.+|++++++++||||+++++++...+ ..+++
T Consensus 6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~l~ 78 (262)
T cd06613 6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRD--KLWIV 78 (262)
T ss_pred EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCC--EEEEE
Confidence 56788899999999999964 567888988764432 13467899999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 79 ~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 9999999999988532 356889999999999999999999988 9999999999999999999999999875322
Q ss_pred ------CCCccccchhhhccC---CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ------AAKTGSAAMELLETS---AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~---~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|++||.+... .++.++|||||||++|||+||+.||..... .+-........ . .+....
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~--~~~~~~~~~~~--~----~~~~~~ 227 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP--MRALFLISKSN--F----PPPKLK 227 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcc--C----CCcccc
Confidence 223468999998766 889999999999999999999999964331 11111111110 0 111111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||..+|.+||++.+|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 23445678999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=291.60 Aligned_cols=241 Identities=29% Similarity=0.452 Sum_probs=193.8
Q ss_pred ccccccCccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|.|+||.||+++... +..+++|.+..... ....+.+.+|++.+.+++|+||+++++++...+ .
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~ 75 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD----EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE--P 75 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC----hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--e
Confidence 356788999999999999754 37789998754322 114568999999999999999999999998876 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.+++|||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccCCeEEEcccCCceec
Confidence 799999999999999986543333899999999999999999999988 999999999999999999999999987533
Q ss_pred CC----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 TA----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ~~----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.. ....|++||......++.++||||+|+++|||++ |+.||.. .+..........+...
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~--~~~~~~~~~~~~~~~~-------- 223 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG--MSNEEVLEYLKKGYRL-------- 223 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHhcCCCC--------
Confidence 21 2346899999988889999999999999999999 7888753 2333333333322111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
..+...+.++.+++.+||..+|++|||+.|+++.|
T Consensus 224 --~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 --PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11122456788999999999999999999998754
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=314.77 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=185.8
Q ss_pred cccccccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++..+|+|+||.||++... .+..|++|.+... +.+.+|++++++++|||||++++++.... ..
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~ 161 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAYRWKS--TV 161 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeEeeCC--EE
Confidence 377889999999999999753 3467888866432 23568999999999999999999988766 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+. ++|.+++. ....+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 162 ~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EEEehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 99999995 68888883 3467899999999999999999999988 9999999999999999999999999875322
Q ss_pred -----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCC--CC--cc-
Q 004124 637 -----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQ--PL--KD- 699 (772)
Q Consensus 637 -----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~--~~--~~- 699 (772)
.++..|+|||.+....++.++|||||||++|||++|+.||...... ....+..+..... +. ..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 2456789999999899999999999999999999999999643221 1111111111000 00 00
Q ss_pred --------------ccCCcc--ccc--cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 --------------IVDPTL--KSF--QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 --------------~~d~~l--~~~--~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.. ... ......++.+++.+||..||++||++.|++..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 000 01123567889999999999999999999874
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=294.31 Aligned_cols=247 Identities=20% Similarity=0.318 Sum_probs=193.5
Q ss_pred ccccccCccceEEEEEEEEcC--CcEEEEEEeeecccch-----hhhhHHHHHHHHHHHHhc-CCCCcccceeEEEEcCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRAD-----WSKNLESQFRKKIDTLSK-VNHKNFVNLIGYCEEDE 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--~~~vaVK~~~~~~~~~-----~~~~~~~~f~~Ei~~L~~-l~HpNIV~l~g~~~~~~ 552 (772)
++.+.+|.|+||.||+|.... +..+++|.+....... .......++.+|+.++.+ ++||||+++++++...+
T Consensus 3 ~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 82 (269)
T cd08528 3 AVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND 82 (269)
T ss_pred hhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC
Confidence 456778999999999999765 6789999876432211 112234567889998875 79999999999998876
Q ss_pred CceEEEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+ .+ ++||||||+||+++.++.+||+||
T Consensus 83 --~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 83 --RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred --eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCCCcEEEecc
Confidence 679999999999999987532 34568999999999999999999996 55 999999999999999999999999
Q ss_pred cCccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 630 SFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 630 Gla~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
|++.... .+...|++||...+..++.++||||||+++|||++|+.||... +..........+.. ...
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~--~~~~~~~~~~~~~~--~~~- 233 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST--NMLSLATKIVEAVY--EPL- 233 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc--CHHHHHHHHhhccC--CcC-
Confidence 9875422 2344689999998888999999999999999999999998532 23333333222211 100
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.......++.+++.+||+.||++||++.|+..+++
T Consensus 234 ------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 234 ------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 01123467889999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=301.69 Aligned_cols=242 Identities=22% Similarity=0.300 Sum_probs=193.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||+||+|+.. +++.+++|.+....... ....+.+.+|++++.+++|+||+++++++...+ ..++|
T Consensus 4 ~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv 79 (316)
T cd05574 4 KKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK--RNKVKRVLTEQEILATLDHPFLPTLYASFQTET--YLCLV 79 (316)
T ss_pred EEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch--HHHHHHHHHHHHHHHhCCCCCchhheeeeecCC--EEEEE
Confidence 56678899999999999965 48899999887543221 234567999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+.+++|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999999987544567899999999999999999999988 9999999999999999999999999865321
Q ss_pred -----------------------------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC
Q 004124 637 -----------------------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681 (772)
Q Consensus 637 -----------------------------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~ 681 (772)
.++..|+|||...+..++.++||||||+++|||++|+.||...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 123458999999888899999999999999999999999964332
Q ss_pred CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 004124 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS----MRGIAA 739 (772)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs----~~evl~ 739 (772)
............... .....+.++.+++.+||+.+|++||+ ++|+++
T Consensus 238 --~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 --DETFSNILKKEVTFP---------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred --HHHHHHHhcCCccCC---------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 122222221111110 01125678999999999999999999 666654
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=294.18 Aligned_cols=245 Identities=22% Similarity=0.345 Sum_probs=189.7
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccch-----hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRAD-----WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~-----~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.+.+|.|+||.||+|... +++.+++|.+....... ......+.+.+|++++++++||||+++++++...+ .
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~ 82 (272)
T cd06629 5 KGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE--Y 82 (272)
T ss_pred ecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC--c
Confidence 4567889999999999854 68889999875432111 11223457889999999999999999999998776 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 79999999999999998643 56899999999999999999999987 999999999999999999999999987643
Q ss_pred C-----------CCCccccchhhhccCC--CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 636 T-----------AAKTGSAAMELLETSA--VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ~-----------~~~~~~~aPE~~~~~~--~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
. .+...|++||.+.... ++.++||||||+++||+++|+.||..... ..... ...... ....++
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~-~~~~~~--~~~~~~ 234 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-IAAMF-KLGNKR--SAPPIP 234 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-HHHHH-Hhhccc--cCCcCC
Confidence 2 1234688999986554 88999999999999999999999953221 22111 111110 011111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ......+.++.+++.+||+.+|++||+++||++
T Consensus 235 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 235 P---DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred c---cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 1 112234578899999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=302.22 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=188.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.. ++..||+|.+...... .....+.+|++++++++||||+++++++...+ ..++|
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~lv 82 (301)
T cd07873 9 IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLV 82 (301)
T ss_pred EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc----CchhHHHHHHHHHHhcCCCCcceEEEEEecCC--eEEEE
Confidence 67788999999999999865 5788999987644321 12345778999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ ++|.+++.. ....+++.....++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 83 ~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 99997 689888753 2346889999999999999999999988 9999999999999999999999999875422
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC----CccccC--
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP----LKDIVD-- 702 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~----~~~~~d-- 702 (772)
.+...|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+......... .+ ...+.+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCChhhchhhhccc
Confidence 12446899998754 457889999999999999999999996432 222221111100 00 000000
Q ss_pred -------Cc-----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 -------PT-----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 -------~~-----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. ..........++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00111234567889999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=292.03 Aligned_cols=242 Identities=22% Similarity=0.330 Sum_probs=195.2
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||++.. .++..+++|.+..... .....+++.+|++++++++||||+++++++........+++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 3 EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM---TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred eeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 5677889999999999985 4678889888764332 23345678999999999999999999998876544467999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMH-----QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH-----~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
|||+++++|.+++... ....+++.....++.+++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999998643 2457899999999999999999999 555 999999999999999999999999987
Q ss_pred cCCC---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 633 NNTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 633 ~~~~---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.... .+...|++||.+....++.++||||||+++|||++|+.||.... ..........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~--------- 226 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGK--------- 226 (265)
T ss_pred ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCC---------
Confidence 6432 23456889999988889999999999999999999999996433 333333222221
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+...+.++.+++.+||+.+|++||++.+|++
T Consensus 227 -~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 -FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred -CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11223445678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=300.39 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=192.9
Q ss_pred HHHHHHhhcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEE
Q 004124 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGY 547 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~ 547 (772)
.++..++++| ++++.+|+|+||.||++.. .+++.+++|.+.... .....+.+|+.++.++ +||||++++++
T Consensus 15 ~~~~~~~~~y-~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 15 ESLGDPTDTW-EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS------DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred ccCCCCCCCe-EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc------cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 4455555666 6778899999999999996 467888998875432 1235678899999999 89999999999
Q ss_pred EEcCCC---ceEEEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 548 CEEDEP---FTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 548 ~~~~~~---~~~~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
+...+. ...++||||+++|+|.++++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~~ 165 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTEG 165 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCC
Confidence 875431 2479999999999999988632 3456899999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCC---------CCCccccchhhhccC-----CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH
Q 004124 623 AAKISDFSFWNNTT---------AAKTGSAAMELLETS-----AVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS 688 (772)
Q Consensus 623 ~~kLsDFGla~~~~---------~~~~~~~aPE~~~~~-----~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~ 688 (772)
.+||+|||++.... .+...|++||.+... .++.++|||||||++|||++|+.||.... ..+-..
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~--~~~~~~ 243 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH--PVKTLF 243 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc--HHHHHH
Confidence 99999999876422 234468999987543 36899999999999999999999986332 111122
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....... .... .++....++.+++.+||+.+|++||++.|+++
T Consensus 244 ~~~~~~~--~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 244 KIPRNPP--PTLL------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHhcCCC--CCCC------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2211111 1111 12334567899999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=299.17 Aligned_cols=234 Identities=22% Similarity=0.293 Sum_probs=185.0
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|+|+||+||++... +++.+++|.+....... ......+..|++++++++||||+++++++...+ ..++||||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK--RKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--DLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh--hhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--eEEEEEecCC
Confidence 578999999999854 67889999876543221 223456788999999999999999999998776 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-------- 636 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-------- 636 (772)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++....
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (277)
T cd05577 77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGR 154 (277)
T ss_pred CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccc
Confidence 999999987554457899999999999999999999988 9999999999999999999999999875432
Q ss_pred CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 637 AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 637 ~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
.+...|++||...+..++.++|||||||++|||++|+.||..... ........... .....+.....
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 223 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-----------MAVEYPDKFSP 223 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-----------ccccCCccCCH
Confidence 233468999999888899999999999999999999999964332 11111111100 01112233456
Q ss_pred HHHHHHHHcccCCCCCCCCHHH
Q 004124 715 ELLVVIKNCVHPDPKQRPSMRG 736 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RPs~~e 736 (772)
++.+++.+||+.+|++||+++|
T Consensus 224 ~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 224 EAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHHccCChhHccCCCc
Confidence 7889999999999999994444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=299.34 Aligned_cols=249 Identities=19% Similarity=0.289 Sum_probs=189.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|.|+||.||+|+.. ++..+++|++...... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 77 (284)
T cd07860 3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLV 77 (284)
T ss_pred eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc---cccchHHHHHHHHHHhcCCCCCcchhhhcccCC--cEEEE
Confidence 46778899999999999865 6888999987644321 223357889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 99995 68998887555567899999999999999999999988 99999999999999999999999998754321
Q ss_pred -------CCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC------------
Q 004124 638 -------AKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP------------ 696 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~------------ 696 (772)
+...|+|||.+.+.. ++.++|||||||++|||+||+.||..... ........... .+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCCCChhhhhhhhHHH
Confidence 234689999876544 68899999999999999999999964321 11111111110 00
Q ss_pred -----CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 -----LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 -----~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..................++.+++.+||+.||++||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000011111111223467789999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=295.68 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=187.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+.. +++.+++|.+..... .....+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 12 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--~~~lv 84 (267)
T cd06645 12 ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--KLWIC 84 (267)
T ss_pred HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEEE
Confidence 45677889999999999854 678899988764421 12346889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++.+...++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 85 MEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred EeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 999999999998853 346899999999999999999999988 9999999999999999999999999875321
Q ss_pred ------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.++..|+|||.+. ...++.++|||||||++|||++|+.||........ .......... .+....
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--~~~~~~~~~~-----~~~~~~ 233 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LFLMTKSNFQ-----PPKLKD 233 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--HHhhhccCCC-----CCcccc
Confidence 2345789999874 45688999999999999999999999853322111 1111111100 011100
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+..+.+++.+||+.+|++||++++|++
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 -KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 1123456889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=297.50 Aligned_cols=243 Identities=26% Similarity=0.406 Sum_probs=190.8
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+++... +..+|+|.+....... .......+|+.++.+++||||+++++++.... ..++|
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~v 76 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE---EEREENIREIKILRRLRHPNIVQILDVFQDDN--YLYIV 76 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH---HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--EEEEE
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc---cccchhhhhhhccccccccccccccccccccc--ccccc
Confidence 567889999999999999764 5589999887654322 22234456999999999999999999998866 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
|||+++++|.+++. ....+++..+..++.|+++||+|||+.+ |+||||||+||++++++.++|+|||.+..
T Consensus 77 ~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccc
Confidence 99999999999996 3456899999999999999999999988 99999999999999999999999998753
Q ss_pred ----CCCCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCccccc
Q 004124 635 ----TTAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 635 ----~~~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
...++..|+|||... ...++.++||||+|+++|||++|+.||..... +............ .... .. .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~----~~-~ 225 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP--LPSS----SQ-Q 225 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH--HHHH----TT-S
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc--cccc----cc-c
Confidence 122345689999988 88899999999999999999999999964311 1111111111110 0000 00 0
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......++.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011378999999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=301.54 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=191.2
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++.+|.|+||.||+|+. .++..+++|.+...... ..+.+.+|+.+++.++|+||+++++++..++ ..++|
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv 94 (297)
T cd06656 22 TRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVV 94 (297)
T ss_pred eeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--EEEEe
Confidence 5678899999999999995 57889999988643321 2356889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++++|.+++.. ..+++.++..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999998842 45789999999999999999999988 9999999999999999999999999875322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|++||...+..++.++|||||||++||++||+.||...+.. ...........+ . ...+.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~--~~~~~~~~~~~~-------~-~~~~~ 239 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIATNGTP-------E-LQNPE 239 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc--hheeeeccCCCC-------C-CCCcc
Confidence 2344688999998888999999999999999999999999643321 100000110000 0 01123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.+++.+||+.+|++||++.++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 44567889999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=292.08 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=192.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||+||+|... ++..+++|++...... .....+.+|+++++.++|+||+++++.+...+ ..++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv 77 (267)
T cd06610 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ----TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--ELWLV 77 (267)
T ss_pred eeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc----hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--EEEEE
Confidence 56778899999999999954 6778889887543321 13467999999999999999999999988776 67999
Q ss_pred EeccCCCChhhhhhhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~-~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
+||+++++|.+++..... ..+++.....++.|++.|++|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999999865433 56899999999999999999999988 9999999999999999999999999864222
Q ss_pred -----------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -----------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -----------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.+...|++||.+... .++.++|||||||++|||++|+.||..... .+..........+ .....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~~~~~---~~~~~ 230 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP--MKVLMLTLQNDPP---SLETG 230 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh--hhhHHHHhcCCCC---CcCCc
Confidence 234468899998766 789999999999999999999999964322 1222222222111 00000
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......++++.+++.+||+.||++||++.|+++
T Consensus 231 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 --ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 001245678899999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=313.07 Aligned_cols=243 Identities=17% Similarity=0.223 Sum_probs=181.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. .+..||+|.... .....|+.++++++|||||++++++...+ ..++
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 134 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----------GTTLIEAMLLQNVNHPSVIRMKDTLVSGA--ITCM 134 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----------cccHHHHHHHHhCCCCCCcChhheEEeCC--eeEE
Confidence 377889999999999999975 456788876322 12356899999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|+||+ .|+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 135 v~e~~-~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred EEEcc-CCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 99999 4689888853 3456899999999999999999999988 999999999999999999999999988632
Q ss_pred -----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcc-cCCCCCHHHH-------HHHHhhcCCCCccccC
Q 004124 636 -----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY-SIENGSLENW-------ASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~-~~~~~~~~~~-------~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+..++.++|||||||++|||+++..|+ .........+ ................
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 12456789999999889999999999999999999965554 3222111111 1111110000000000
Q ss_pred --Ccc--------------ccc-------cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 --PTL--------------KSF-------QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 --~~l--------------~~~-------~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+.. ... ......+..++|.+||+.||++|||+.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000 000 0122345667999999999999999999986
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=293.04 Aligned_cols=248 Identities=23% Similarity=0.390 Sum_probs=189.9
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC--CCCcccceeEEEEcCC--CceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV--NHKNFVNLIGYCEEDE--PFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l--~HpNIV~l~g~~~~~~--~~~~ 556 (772)
.+++.+|+|.||.||+|.|+ |..||||++.... ++.+.+|.++...+ ||+||..+++.-..++ ..+.
T Consensus 214 ~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd--------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD--------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred EEEEEecCccccceeecccc-CCceEEEEecccc--------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 56788999999999999997 7889999987543 35677888887754 9999999998654332 2357
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc------CCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ------LTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~------~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
+||++|.++|||++||.. ..++....++++..+|.||+|||- -+|.|.|||||+.|||+.+++...|+|+|
T Consensus 285 wLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 999999999999999953 568999999999999999999993 35789999999999999999999999999
Q ss_pred Ccc-------------CCCCCCccccchhhhccCC----C--CCCCchHHHHHHHHHHHcC----------CCcccC---
Q 004124 631 FWN-------------NTTAAKTGSAAMELLETSA----V--DLESNVYSFGTILFEMITG----------RISYSI--- 678 (772)
Q Consensus 631 la~-------------~~~~~~~~~~aPE~~~~~~----~--s~ksDVwSfGvvL~ELltG----------~~P~~~--- 678 (772)
+|- ....|+..|||||++.... + -..+||||||.|+||++-+ +.||..
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 863 2334678999999974321 1 1468999999999999863 245542
Q ss_pred CCCCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 679 ENGSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+.+.++ +++++-- +.+.|.++. ...+.+..+.++|+.||..+|..|-|+-.+-+.|.++.+
T Consensus 442 ~DPs~ee-MrkVVCv-----~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 442 SDPSFEE-MRKVVCV-----QKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCHHH-Hhcceee-----cccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1222222 1111111 111122221 124677889999999999999999999999999988775
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=294.67 Aligned_cols=238 Identities=23% Similarity=0.326 Sum_probs=191.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||++... +++.+++|.+...... .....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 4 ~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 79 (290)
T cd05580 4 EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV--KLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS--NLYLV 79 (290)
T ss_pred EEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--eEEEE
Confidence 56788899999999999965 5788999987543211 1233467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 80 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 999999999999853 356899999999999999999999988 9999999999999999999999999876432
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.+...|++||.+....++.++||||||+++|||+||+.||.... ..........+... .+....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~-----------~~~~~~ 222 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--PIQIYEKILEGKVR-----------FPSFFS 222 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCCcc-----------CCccCC
Confidence 23456899999988888999999999999999999999996433 22222222222111 112234
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
..+.+++.+||+.+|.+|+ +++|+++
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 6788999999999999998 6666653
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=306.88 Aligned_cols=250 Identities=16% Similarity=0.207 Sum_probs=187.0
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+.+++.+|.|+||+||+|.. .++..||||++..... .....+.+.+|++++++++||||+++++++..... .
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ---SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh---hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 36788999999999999985 4678899998764321 12234567899999999999999999998764321 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++++|++ +++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCCCCEEEcCCcccee
Confidence 468999998 789988764 346899999999999999999999988 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcccc-----
Q 004124 635 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIV----- 701 (772)
Q Consensus 635 ~~------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~----- 701 (772)
.. .++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+ ..+......... .+..+..
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 168 ADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND--YIDQLKRIMEVVGTPSPEVLKKISS 245 (343)
T ss_pred cCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHhcch
Confidence 32 23557899999866 578999999999999999999999996432 111111111100 0000000
Q ss_pred --------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 702 --------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 --------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
............+.+.+++.+|++.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000001123457899999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=307.62 Aligned_cols=239 Identities=20% Similarity=0.279 Sum_probs=194.9
Q ss_pred ccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+..||.|+||.||-|+. .+...||||++....... .....++.+|+..|.+++|||+|.+.|+|.... ..+||||
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs--~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWLVME 106 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWLVME 106 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeecccccccc--HHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHHHHH
Confidence 45688999999999995 466789999987544322 233467999999999999999999999998765 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----CC
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-----TT 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~-----~~ 636 (772)
|| -|+-.+++.. ..+++....+..|+.|.+.||+|||+.+ .||||||+.||||.+.|.+||+|||.+.. ..
T Consensus 107 YC-lGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 107 YC-LGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred HH-hccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 99 5688888753 3456888889999999999999999998 99999999999999999999999998754 35
Q ss_pred CCCccccchhhh---ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 AAKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ~~~~~~~aPE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.|+++|||||++ ..+.|+-|+||||+||+..||.-.++|+. +.+...-+..+...+.| .+. ..+.+
T Consensus 183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF--nMNAMSALYHIAQNesP-------tLq--s~eWS 251 (948)
T KOG0577|consen 183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNAMSALYHIAQNESP-------TLQ--SNEWS 251 (948)
T ss_pred cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc--CchHHHHHHHHHhcCCC-------CCC--CchhH
Confidence 578899999997 56889999999999999999999999974 33333333333333222 222 35678
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.+..++..|+++-|.+|||..++++.
T Consensus 252 ~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 889999999999999999999988753
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=319.79 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=179.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC------CCcccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN------HKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~------HpNIV~l~g~~~~~~ 552 (772)
+++++.+|+|+||+||+|+.. .++.||||++..... ..+++..|++++.+++ |.+++++++++....
T Consensus 131 y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 131 FKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK------YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred EEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh------hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 367889999999999999864 577899998854221 1234555666666655 456889999887654
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCC---------
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDY--------- 622 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~--------- 622 (772)
. +.++|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+ .+ ||||||||+|||++.++
T Consensus 205 ~-~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 205 G-HMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred c-eEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCccccccccc
Confidence 3 579999998 7789888853 3568999999999999999999997 57 99999999999998765
Q ss_pred -------cEEEccccCccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHH
Q 004124 623 -------AAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWAS 688 (772)
Q Consensus 623 -------~~kLsDFGla~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~ 688 (772)
.+||+|||.+... ..++..|+|||.+.+..|+.++|||||||++|||+||+.||...+.. ....+.
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 4999999986532 23566899999999999999999999999999999999999643321 001111
Q ss_pred HHhh--------------------cCCCCccccCCc-c------cccc-HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 689 EYLK--------------------GEQPLKDIVDPT-L------KSFQ-ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 689 ~~~~--------------------~~~~~~~~~d~~-l------~~~~-~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+. .........++. + .... ......+.+|+.+||+.||++|||++|+++
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 1100 000000000000 0 0000 011345779999999999999999999987
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=291.95 Aligned_cols=240 Identities=22% Similarity=0.356 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||++... +++.+++|.+..... ....+++.+|++++++++||||+++++++...+ ..++|
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 77 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN----EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--DISIC 77 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC----hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--EEEEE
Confidence 45677889999999999976 578899988765432 234567899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
+||+++++|.+++.... ..+++.....++.|++.|++|||+ .+ ++||||||+||++++++.+||+|||.+...
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 78 MEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999999986432 678889999999999999999999 77 999999999999999999999999987532
Q ss_pred ----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC---CCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN---GSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..+...|++||...+..++.++||||||+++|||++|+.||.... ....+..........+ ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 224 (265)
T cd06605 155 LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP----------RL 224 (265)
T ss_pred HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC----------CC
Confidence 234457899999988899999999999999999999999996442 2223333333222111 11
Q ss_pred cH-HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QE-NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~-~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. ....++.++|.+||..+|++||++.|++.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 11 25677899999999999999999999975
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=298.01 Aligned_cols=241 Identities=20% Similarity=0.263 Sum_probs=189.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|+|+||+||+|+.. ++..|++|.+....... ....+++.+|++++++++||||++++++|...+ ..++|
T Consensus 18 ~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv 93 (307)
T cd06607 18 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH--TAWLV 93 (307)
T ss_pred hhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC--eEEEE
Confidence 45677899999999999864 67889999875432221 233457899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ |++.+++.. ....+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++....
T Consensus 94 ~e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 94 MEYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred HHhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 99996 677777643 2346899999999999999999999988 9999999999999999999999999876433
Q ss_pred --CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 --AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 --~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.+...|+|||.+. ...++.++||||||+++|||+||+.||...+ ............. +.. ....
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~--~~~~~~~~~~~~~-------~~~--~~~~ 238 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNDS-------PTL--SSND 238 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc--HHHHHHHHhcCCC-------CCC--Cchh
Confidence 2345789999863 4668899999999999999999999985332 2222221111111 111 1123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...++.+++.+||+.+|++||++.+|+..
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 55678999999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=296.74 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=190.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|.|+||.||+|+.. ++..+++|.+..... ......+.+|++++++++|+||+++++++.++. ..++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 77 (274)
T cd06609 4 TLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA----EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--KLWII 77 (274)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc----chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--eEEEE
Confidence 45677889999999999965 678899998764321 223456889999999999999999999988776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+||+++++|.+++.. ..+++.....++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++....
T Consensus 78 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 78 MEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred EEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999999999853 27899999999999999999999988 99999999999999999999999998754322
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
+...|++||.+.+..++.++|||||||++|||+||+.||...+ ............. +.... .
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~-------~~~~~--~ 221 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH--PMRVLFLIPKNNP-------PSLEG--N 221 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc--hHHHHHHhhhcCC-------CCCcc--c
Confidence 2345899999988889999999999999999999999996433 2222222211111 11110 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+.++.+++.+||..+|++||+++++++
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 14567889999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=296.84 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=190.1
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEE
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYC 548 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~ 548 (772)
++......| ++...+|.|+||.||+|+. .+++.+++|...... ....++..|+.++.++ +|+||+++++++
T Consensus 10 ~~~~~~~~~-~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 10 ALRDPAGIF-ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE------DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhcChhhhh-hhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh------HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 333333333 5677889999999999996 467888888765432 1235688899999998 799999999998
Q ss_pred EcC----CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcE
Q 004124 549 EED----EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 624 (772)
Q Consensus 549 ~~~----~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~ 624 (772)
... .....++||||+++|+|.+++.......+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCE
Confidence 632 1225799999999999999986555556888889999999999999999988 9999999999999999999
Q ss_pred EEccccCccCCC---------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH
Q 004124 625 KISDFSFWNNTT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690 (772)
Q Consensus 625 kLsDFGla~~~~---------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~ 690 (772)
||+|||++.... .+...|+|||.+. ...++.++|||||||++|||+||+.||..... ... ....
T Consensus 161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~-~~~-~~~~ 238 (282)
T cd06636 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-MRA-LFLI 238 (282)
T ss_pred EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH-Hhh-hhhH
Confidence 999999875322 2344689999874 35688899999999999999999999953221 111 1111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... .. +.. ....++.++.+++.+||+.||.+||++.|+++
T Consensus 239 ~~~--~~-----~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PRN--PP-----PKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhC--CC-----CCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 100 00 000 11234568999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=298.83 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=190.0
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEE
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYC 548 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~ 548 (772)
++..+.++| ++++.+|+|+||.||+++.. +++.+++|...... .....+.+|+.++.++ +||||+++++++
T Consensus 12 ~~~~~~~~~-~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 12 SFPDPSDTW-EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH------DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred cCCCcccce-eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc------chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 344445555 67788999999999999864 56788888764321 1235688899999999 699999999988
Q ss_pred EcC---CCceEEEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc
Q 004124 549 EED---EPFTRMMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623 (772)
Q Consensus 549 ~~~---~~~~~~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~ 623 (772)
... .....++||||+++|+|.++++.. ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCCCC
Confidence 532 122579999999999999987532 2356889999999999999999999988 999999999999999999
Q ss_pred EEEccccCccCCC---------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHH
Q 004124 624 AKISDFSFWNNTT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689 (772)
Q Consensus 624 ~kLsDFGla~~~~---------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~ 689 (772)
+||+|||+++... .+...|+|||.+. ...++.++|||||||++|||+||+.||..... .... ..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-~~~~-~~ 240 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-MRAL-FK 240 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-hHHH-hh
Confidence 9999999875322 2345689999874 34578999999999999999999999863321 1111 11
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.... . .....+ +.....++.+++.+||+.+|++||++.|+++.
T Consensus 241 ~~~~-~-~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 IPRN-P-PPTLHQ------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cccc-C-CCcccC------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1111 0 001111 12234578899999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=298.64 Aligned_cols=236 Identities=20% Similarity=0.304 Sum_probs=187.9
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
...+|+|+||.||++... ++..+++|.+.... ....+.+.+|+.++++++|+||+++++.+..++ ..++|||
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~lv~e 99 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--ELWVVME 99 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecch-----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--eEEEEEe
Confidence 355788999999999864 67889999875432 223456899999999999999999999988776 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
|+++++|.+++. ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 100 ~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 100 FLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 999999999874 235889999999999999999999988 9999999999999999999999999875321
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
.++..|+|||......++.++|||||||++|||++|+.||..... .......... ..+... .....
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~-------~~~~~~-~~~~~ 244 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--LQAMRRIRDN-------LPPRVK-DSHKV 244 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhc-------CCCccc-ccccc
Confidence 234568999999888899999999999999999999999964322 1111111111 011111 11223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.+++.+||..||++|||+.|+++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 4578889999999999999999999874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=298.01 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=188.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|..+ +++.+++|++...... ....+.+.+|++++++++||||+++++++..++ ..++|
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 78 (286)
T cd07846 4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD---KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK--RLYLV 78 (286)
T ss_pred eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc---chhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--eEEEE
Confidence 56788999999999999975 5788999987543321 223457889999999999999999999998766 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++++|..+.. ....++|..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 79 FEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred EecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999998887764 2345899999999999999999999988 99999999999999999999999998754321
Q ss_pred -------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC------------
Q 004124 638 -------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL------------ 697 (772)
Q Consensus 638 -------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~------------ 697 (772)
+...|+|||...+ ..++.++|||||||++|||+||+.||.... ....+. .........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS-DIDQLY-HIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc-hHHHHH-HHHHHhCCCchhhHHHhccch
Confidence 3346889998764 457889999999999999999999886432 111111 111000000
Q ss_pred --ccccCCccc------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 --KDIVDPTLK------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 --~~~~d~~l~------~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+... ...+..+..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000 011234577899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=296.04 Aligned_cols=238 Identities=19% Similarity=0.291 Sum_probs=192.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|.|+||.||+|... ++..+|+|....... ....+.|.+|++++.+++||||+++++++..++ ..++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~l 79 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWI 79 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--eEEE
Confidence 456778899999999999864 678899997653321 223467899999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||+++|+|.+++. ...+++.....++.+++.|++|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 80 IMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999999884 245899999999999999999999988 99999999999999999999999998753322
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|++||......++.++|||||||++|||++|+.||.... ...+......... ....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~----------~~~~ 222 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH--PMKVLFLIPKNNP----------PTLE 222 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc--hHHHHHHHhcCCC----------CCCC
Confidence 3446899999988889999999999999999999999985322 2222222111111 1122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.+|++||++.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 3345678899999999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=292.75 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+|+.. ++..+++|.+....... ....+.+.+|++++++++||||+++++++.+++ ..++|
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 78 (258)
T cd05578 3 ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE--KGSVRNVLNERRILQELNHPFLVNLWYSFQDEE--NMYLV 78 (258)
T ss_pred eEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc--hhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--eEEEE
Confidence 56778899999999999975 58889999886543211 234568999999999999999999999988766 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+||+++++|.+++... ..+++.....++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 79 VDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred EeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 9999999999998533 57899999999999999999999988 99999999999999999999999998754322
Q ss_pred ------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 638 ------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 638 ------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
+...|++||......++.++||||||+++|||++|+.||.........+........ ....+..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 224 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA----------DVLYPAT 224 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccc----------cccCccc
Confidence 334678999998888999999999999999999999999755433233322222110 0112233
Q ss_pred HHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSM--RGIA 738 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~--~evl 738 (772)
.+.++.+++.+||+.||.+||++ +|++
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 225 WSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 45788899999999999999999 5554
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=299.02 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=187.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.. +|..+++|.+...... ......+.+|++++++++||||+++++++.+.. ..++|
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~lv 77 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLYDVLHSDK--KLTLV 77 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc---ccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--ceEEE
Confidence 45677899999999999965 6888999988654321 122356788999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||++ ++|.+++... ...+++.....++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 78 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 78 FEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred EecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 99996 5888877532 356899999999999999999999988 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC--------Ccccc
Q 004124 637 ------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP--------LKDIV 701 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 701 (772)
.+...|+|||.+.+. .++.++|||||||++|||+||+.|+..... ..+........... .....
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC-HHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 123468999987654 478999999999999999999998643322 22222221110000 00000
Q ss_pred C----Ccc------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 D----PTL------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d----~~l------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+ +.. .......+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 000 0111234578889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=288.62 Aligned_cols=241 Identities=21% Similarity=0.326 Sum_probs=191.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|... +++.+++|.+...... ....+.+.+|++++++++|+||+++++++...+ ..++|
T Consensus 3 ~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~lv 77 (264)
T cd06626 3 QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--KVYIF 77 (264)
T ss_pred eeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC--EEEEE
Confidence 45677899999999999864 6788999988654322 335678999999999999999999999988766 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++++|.+++.. ...+++..+..++.++++|++|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 78 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 78 MEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred EecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999999853 345788999999999999999999988 9999999999999999999999999875432
Q ss_pred ----------CCCccccchhhhccCC---CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 ----------AAKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~~---~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.+...|++||.+.... ++.++||||||+++||+++|+.||...... .........+.. +
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~-------~ 225 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGAGHK-------P 225 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhcCCC-------C
Confidence 2344688999987665 889999999999999999999999643221 122211111111 1
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++. ......++.+++.+||+.+|++||++.|++.
T Consensus 226 ~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PIPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111 1123567789999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=289.01 Aligned_cols=252 Identities=19% Similarity=0.280 Sum_probs=189.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc-ccceeEEEEcCCC----c
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN-FVNLIGYCEEDEP----F 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN-IV~l~g~~~~~~~----~ 554 (772)
+.++++|+|+||+||+|+. .+|+.||+|++......+. ......+|+.+|++++|+| ||++++++...+. .
T Consensus 14 ~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG---~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 14 EKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG---VPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC---CCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3456789999999999994 5788999999987654321 2245679999999999999 9999999987552 2
Q ss_pred eEEEEEeccCCCChhhhhhhhcc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA--EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~--~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
..++|+||+. -+|..++..... ..++......++.|+++||+|||+++ |+||||||.||||+++|.+||+|||+|
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCCCcEeeeccchH
Confidence 4689999995 499999865432 45777889999999999999999998 999999999999999999999999998
Q ss_pred cCCCCC---------CccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCC----C
Q 004124 633 NNTTAA---------KTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQP----L 697 (772)
Q Consensus 633 ~~~~~~---------~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~----~ 697 (772)
+..... +-.|.|||++.+. .|++..||||+|||+.||++++.-|.+... ..+ ...+..- ..| .
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~q-l~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQ-LFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHH-HHHHHHHcCCCCccCC
Confidence 744321 2247899998665 799999999999999999999888864432 222 2222110 011 1
Q ss_pred cccc---C--Ccc------ccccH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 KDIV---D--PTL------KSFQE---NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ~~~~---d--~~l------~~~~~---~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.+. + ... ..... .......+++.+|++.+|.+|.|++.++++
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1110 0 000 01111 112478899999999999999999999875
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=293.28 Aligned_cols=240 Identities=20% Similarity=0.306 Sum_probs=184.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHH-HhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~-L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +|+.||+|.+...... ....++..|+.. ++..+||||+++++++..++ ..++
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~--~~~l 77 (283)
T cd06617 4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS----QEQKRLLMDLDISMRSVDCPYTVTFYGALFREG--DVWI 77 (283)
T ss_pred eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc----HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--cEEE
Confidence 56788899999999999965 6889999987654221 123455566665 66679999999999998766 6799
Q ss_pred EEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
||||++ |+|.+++... ....+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||+++..
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999996 7888887542 234689999999999999999999985 6 999999999999999999999999987643
Q ss_pred C--------CCCccccchhhhcc----CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 T--------AAKTGSAAMELLET----SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. .+...|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .....+..+
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~------- 226 (283)
T cd06617 155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL-KQVVEEPSP------- 226 (283)
T ss_pred ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH-HHHHhcCCC-------
Confidence 2 23446899998754 457899999999999999999999996433222222 222221110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... ....++++.+++.+||..+|++||++.++++
T Consensus 227 ~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 227 QLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 010 1234567899999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=290.14 Aligned_cols=240 Identities=20% Similarity=0.368 Sum_probs=192.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+|... ++..+++|.+...... ....+.+.+|++++++++|+||+++++++...+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--~~~lv 77 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP---VKEKEASKKEVILLAKMKHPNIVTFFASFQENG--RLFIV 77 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc---chhhHHHHHHHHHHHhCCCCChhhhhheeccCC--eEEEE
Confidence 34567889999999999965 5788899987653221 223457889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~~-- 636 (772)
+||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++ .+||+|||.+....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999999987554556899999999999999999999988 99999999999998875 57999999875432
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.+...|+|||......++.++|||||||++|||++|+.||... +..++......+. .. ...
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~--~~--------~~~ 223 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN--NLHQLVLKICQGY--FA--------PIS 223 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHhccc--CC--------CCC
Confidence 2344689999998888999999999999999999999998532 3334443332221 11 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....++.+++.+||..+|++|||+.|+++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 233467889999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=296.42 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=186.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.+ +++.+++|.+....... ....+.+|++++++++|+||+++++++.+.+ ..++|
T Consensus 8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 81 (291)
T cd07844 8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG----APFTAIREASLLKDLKHANIVTLHDIIHTKK--TLTLV 81 (291)
T ss_pred eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC----CchhHHHHHHHHhhCCCcceeeEEEEEecCC--eEEEE
Confidence 67788999999999999965 67889999876533211 1235678999999999999999999998776 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ ++|.+++... ...+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 82 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 99997 5999888533 346889999999999999999999988 9999999999999999999999999875421
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCccc--------
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDI-------- 700 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~-------- 700 (772)
.....|+|||...+ ..++.++||||+||++|||++|+.||....... +......... .+..+.
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE-DQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH-HHHHHHHHhcCCCChhhhhhhhhcc
Confidence 12346889998764 558899999999999999999999996443211 1111111100 000000
Q ss_pred --c--------CCccccccHHH--HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 --V--------DPTLKSFQENV--LEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 --~--------d~~l~~~~~~~--~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ...+....... ..++.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00000000111 267789999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=281.64 Aligned_cols=241 Identities=20% Similarity=0.305 Sum_probs=195.4
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++-+.+|+|.|+.||++. ..+|+.+++|.+..+.... ...+++.+|+++...++|||||++.+.+.+.. ..|||
T Consensus 14 ~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~---~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--~~ylv 88 (355)
T KOG0033|consen 14 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA---RDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLV 88 (355)
T ss_pred hHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc---ccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--eeEEE
Confidence 455677889999999997 4578899999887665432 24567899999999999999999999887766 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccCCC
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNTT 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla~~~~ 636 (772)
+|+|.+|+|..-+-.+ ..+++...-.++.||++||.|+|..+ |||||+||+|+||.. .--+||+|||++....
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 9999999998766432 45677888899999999999999998 999999999999953 3568999999986543
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++++|+|||++...+|+..+|||+.|||||-|+.|..||.+++ .......+..+...+.. +..
T Consensus 165 ~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~~g~yd~~~---~~w--- 236 (355)
T KOG0033|consen 165 DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIKAGAYDYPS---PEW--- 236 (355)
T ss_pred CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHhccccCCCC---ccc---
Confidence 45778999999999999999999999999999999999997543 33444555555332221 111
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...++..+|+++|+..||.+|.|+.|.++
T Consensus 237 -~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 237 -DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 245578899999999999999999998764
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=281.34 Aligned_cols=242 Identities=22% Similarity=0.335 Sum_probs=192.6
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhh---hhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWS---KNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~---~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+|.|..++|-++.. ++|.+.|+|++......... ....+.-.+|+.+|+++ .||+|+++.++|+.+. ..++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s--F~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA--FVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--hhhh
Confidence 3455677778888874 46889999998765433322 23445677899999999 7999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+|.|+.|.|+++|. +.-.++.....+|+.|+..|++|||..+ ||||||||+|||+|++.++||+|||+++....
T Consensus 101 VFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn~~i~isDFGFa~~l~~G 176 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDNMNIKISDFGFACQLEPG 176 (411)
T ss_pred hhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccccceEEeccceeeccCCc
Confidence 999999999999995 4456899999999999999999999988 99999999999999999999999999986543
Q ss_pred -------CCccccchhhhc------cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 638 -------AKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 638 -------~~~~~~aPE~~~------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
|+++|.|||.+. ...|+...|+||.|||||.|+.|..||..... .-..+.++.|...+ -.|.
T Consensus 177 ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--mlMLR~ImeGkyqF---~spe 251 (411)
T KOG0599|consen 177 EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--MLMLRMIMEGKYQF---RSPE 251 (411)
T ss_pred hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--HHHHHHHHhccccc---CCcc
Confidence 578999999873 45688999999999999999999999953211 11123333332211 1111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
-.+.+..+.+||.+|++.||.+|.|++|+++.
T Consensus 252 ----Wadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 252 ----WADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ----hhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 13456788999999999999999999999865
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=300.26 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=203.3
Q ss_pred hcccccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCc
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~ 554 (772)
.+++++...+|.|.||.||+++.+. |+.+|+|.+.++.... ....+.+.+|+++|+++. |||||.+++++++..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~--~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-- 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG--KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-- 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc--cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--
Confidence 3456777889999999999999764 8999999997765433 223467999999999998 999999999999887
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC----CcEEEcccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED----YAAKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~----~~~kLsDFG 630 (772)
..++|||++.+|.|.+.+... .++......++.|++.|++|||+.+ |+||||||+|+|+... +.+|++|||
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 789999999999999998654 3899999999999999999999988 9999999999999533 579999999
Q ss_pred CccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 631 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 631 la~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
++.... .++..|+|||++....|+.++||||.||++|.|++|..||..+..... ...+..+... ..+
T Consensus 185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~--~~~i~~~~~~---f~~ 259 (382)
T KOG0032|consen 185 LAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI--FLAILRGDFD---FTS 259 (382)
T ss_pred CceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH--HHHHHcCCCC---CCC
Confidence 986443 356789999999999999999999999999999999999976543222 2234443321 111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+ .-+..+..+.+++..|+..||.+|+++.++++.
T Consensus 260 ~----~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 260 E----PWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred C----CccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1 223457789999999999999999999999984
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=295.50 Aligned_cols=235 Identities=18% Similarity=0.289 Sum_probs=188.1
Q ss_pred cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
..+|.|+||.||+|... ++..+++|.+..+.. ...+.+.+|+.++..++||||+++++++..++ ..++||||
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~iv~e~ 99 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--ELWVLMEF 99 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----chHHHHHHHHHHHHhCCCCchhhhhhheeeCC--eEEEEEec
Confidence 46789999999999864 688999998764432 12456889999999999999999999988776 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+++++|..++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 100 ~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 100 LQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred CCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence 99999998774 245899999999999999999999988 9999999999999999999999999875321
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.+...|+|||.+.+..++.++|||||||++|||++|+.||.... ..+............ . .......
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~--~------~~~~~~~ 244 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--PVQAMKRLRDSPPPK--L------KNAHKIS 244 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhccCCCC--c------cccCCCC
Confidence 23456899999988889999999999999999999999996432 122222211111100 0 0112234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.+++.+||+.+|++||++.|+++.
T Consensus 245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 245 PVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 568889999999999999999999884
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=290.10 Aligned_cols=241 Identities=20% Similarity=0.267 Sum_probs=189.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC----Cc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~----~~ 554 (772)
++++.+|.|+||.||+|+.. +++.+++|.+..... ..++|.+|+++++++ +|+||+++++++.... ..
T Consensus 9 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 9 ELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED------EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred eheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch------hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 67788999999999999975 567889888764321 235789999999999 7999999999997643 22
Q ss_pred eEEEEEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccCCeEEECCCccc
Confidence 4799999999999999986433 457899999999999999999999988 999999999999999999999999987
Q ss_pred cCCC---------CCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 633 NNTT---------AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 633 ~~~~---------~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
.... .+...|+|||.+.. ..++.++|||||||++|||+||+.||.... ............ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~--~~ 236 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH--PMRALFKIPRNP--PP 236 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc--hHHHHHHhhccC--CC
Confidence 5322 23446899998743 357889999999999999999999996322 111122222111 11
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ .......+++.+++.+||..||++|||+.|+++
T Consensus 237 ~~------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 TL------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CC------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 112335678889999999999999999999976
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=294.95 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=189.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|++|.||+|... ++..+++|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--~~~iv 76 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED---EGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--KLYLV 76 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc---ccchhHHHHHHHHHHhcCCCCccCHhheeccCC--eEEEE
Confidence 45678899999999999864 7889999988654321 222356889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ ++|.+++.......+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.+||+|||+++...
T Consensus 77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 77 FEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred EeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 99995 69999986544456899999999999999999999987 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCC-----------
Q 004124 637 ------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPL----------- 697 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~----------- 697 (772)
.+...|+|||.+.+. .++.++|||||||++|||+||+.||...+. ..+ ........ .+.
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQ-LFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHH-HHHHHHHhCCCChHHhhhhhhch
Confidence 123468999987553 578999999999999999999999964321 111 11111110 000
Q ss_pred ------ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 ------KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 ------~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
............+..+.++.+++.+||+.+|++||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000001111112234467889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=294.82 Aligned_cols=250 Identities=19% Similarity=0.238 Sum_probs=187.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|.|+||.||+|+.. +++.+++|.+...... ......+.+|++++.+++||||+++++++...+....++|
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK---EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc---ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 45678889999999999976 5788999988654322 2223467789999999999999999999887633378999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++ ++|.+++... ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 85 ~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99997 5998888543 346899999999999999999999988 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-C----------C-
Q 004124 638 -------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-P----------L- 697 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~----------~- 697 (772)
+...|+|||.+.+. .++.++||||||+++|||++|+.||..... .+.......... + +
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE--IDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchHHHHHhhccc
Confidence 23458999988654 468999999999999999999999864321 111111111000 0 0
Q ss_pred -------ccccCCccc-cccHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 -------KDIVDPTLK-SFQEN-VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 -------~~~~d~~l~-~~~~~-~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......+. .++.. ..+.+.+++.+||+.+|++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000 11111 3567889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=292.51 Aligned_cols=237 Identities=19% Similarity=0.229 Sum_probs=181.4
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHH---HhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT---LSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~---L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+|+|+||.||++... +++.+|+|.+....... ......+.+|..+ +...+||||+.+++++...+ ..++|||
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--KLCFILD 77 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEcccccc--chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--eEEEEEe
Confidence 678999999999964 57889999876543221 1112234444433 33457999999999998776 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC------
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------ 635 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------ 635 (772)
|+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++...
T Consensus 78 ~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (279)
T cd05633 78 LMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (279)
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCCCCEEEccCCcceeccccCcc
Confidence 9999999988853 356899999999999999999999988 999999999999999999999999987532
Q ss_pred -CCCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 -TAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 -~~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||... +..++.++|||||||++|||+||+.||................. .+. ..++..+
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~ 223 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-------VNV---ELPDSFS 223 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc-------CCc---CCccccC
Confidence 23456789999886 45689999999999999999999999964433222222221111 001 1233456
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
.++.+++.+||..||++|| +++|+++.
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 7889999999999999999 58888763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=296.41 Aligned_cols=240 Identities=21% Similarity=0.332 Sum_probs=198.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+-+.+|+|-|..|-.|++ -+|..||||++.+....+. ....+.+|++.|+-++|||||++|.+..... ..||
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~---st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--KlyL 94 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL---STGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--KLYL 94 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh---hhhHHHHHHHHHHHhcCcCeeeeeehhcccc--eEEE
Confidence 44556789999999999984 4799999999987665443 3456889999999999999999999998776 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTTA 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~~~~~ 637 (772)
|+|.-.+|+|++|+.. ....+.+....+++.||..|+.|+|+.. +|||||||+||.+-+ -|-+||.|||++.....
T Consensus 95 iLELGD~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EEEecCCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 9999999999999964 4456889999999999999999999988 999999999999865 58999999999875544
Q ss_pred --------CCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
+...|.|||.+.+..|+ ++.||||+|||||-|+.|+.||...+.+ +.+..++|-.. ..
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS------------ETLTmImDCKY-tv 238 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS------------ETLTMIMDCKY-TV 238 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch------------hhhhhhhcccc-cC
Confidence 34578999999998887 7899999999999999999999754432 11222333222 24
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+...+.+..+||..|+..||++|.+.+||+..
T Consensus 239 PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 239 PSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred chhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 56778899999999999999999999999853
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=294.43 Aligned_cols=243 Identities=22% Similarity=0.311 Sum_probs=185.9
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..+.+|+|+||.||+++.. ++..+|+|.+...... .....+.+|+.++.++. |+||+++++++..++ ..+++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--~~~~~ 81 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE----KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--DCWIC 81 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh----HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--cEEEE
Confidence 3567889999999999964 5788999987643321 33467899999999996 999999999988765 57899
Q ss_pred EeccCCCChhhhh---hhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 560 FEYSPNGSLFEHL---HIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L---~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
|||+. +++.++. .......+++.....++.++++||+|||+ .+ |+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 82 MELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred Eeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99986 4554433 22234678999999999999999999996 46 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhhccC---CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 --------TAAKTGSAAMELLETS---AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~---~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..+...|+|||.+... .++.++|||||||++|||++|+.||.... ...+.......+..+. . .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~--~-~-- 232 (288)
T cd06616 159 VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-SVFDQLTQVVKGDPPI--L-S-- 232 (288)
T ss_pred ccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-hHHHHHhhhcCCCCCc--C-C--
Confidence 1234568999998765 68999999999999999999999996433 1222222222221110 0 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......++.++.+++.+||+.+|++||++.||++.
T Consensus 233 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 233 -NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01113456789999999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=286.87 Aligned_cols=240 Identities=21% Similarity=0.317 Sum_probs=195.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|++|.||+|+.. +++.+++|++...... ...+.+.+|++.+.+++|+||+++++++...+ ..++|
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv 77 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE----EFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--EISIV 77 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--eEEEE
Confidence 56678889999999999976 4889999987654321 33567999999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||+++++|.+++... ..+++..+..++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||++....
T Consensus 78 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 78 LEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred EEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999998533 668999999999999999999999 88 9999999999999999999999999876432
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.+...|+|||......++.++||||||+++|||+||+.||...+. ...+.......... ...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----------~~~ 223 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP----------PSL 223 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC----------CCC
Confidence 123468899999888999999999999999999999999964431 22332322221111 111
Q ss_pred cHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 709 QEN-VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~-~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.. .+..+.+++.+||+.+|++||++.|+++.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 222 55789999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=294.17 Aligned_cols=244 Identities=19% Similarity=0.243 Sum_probs=183.8
Q ss_pred CccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccCCC
Q 004124 487 SDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNG 566 (772)
Q Consensus 487 g~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~G 566 (772)
|.|+++.||+++. +++.+|+|++..... .....+.+.+|++++++++|+||+++++++...+ ..+++|||+++|
T Consensus 11 ~~~~~v~~~~~~~-~~~~~avK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~e~~~~~ 84 (314)
T cd08216 11 EDLMIVHLAKHKP-TNTLVAVKKINLDSC---SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--ELYVVSPLMAYG 84 (314)
T ss_pred cCCceEEEEEecC-CCCEEEEEEEecccc---chhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--eEEEEEeccCCC
Confidence 4555666666654 688999999875421 1234567999999999999999999999998776 679999999999
Q ss_pred ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----------
Q 004124 567 SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------- 636 (772)
Q Consensus 567 sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---------- 636 (772)
+|.+++.......+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.+....
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 9999997554556889999999999999999999988 9999999999999999999999999764221
Q ss_pred ------CCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC------------
Q 004124 637 ------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP------------ 696 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~------------ 696 (772)
.+...|+|||.+.. ..++.++|||||||++|||++|+.||..... ....... ..+..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA-TQMLLEK-VRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH-HhccCccccccCchhhhc
Confidence 12335889999865 4588999999999999999999999964321 1111111 111000
Q ss_pred --Ccc----ccCCcc-----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 --LKD----IVDPTL-----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 --~~~----~~d~~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
... ..++.. .........++.+++.+||+.+|++|||++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 000000 11223445688999999999999999999999874
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=286.24 Aligned_cols=243 Identities=18% Similarity=0.248 Sum_probs=190.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+. .++..+++|.+.............+.|.+|++++++++|+||+++++++.+......++|
T Consensus 5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v 84 (264)
T cd06653 5 RLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIF 84 (264)
T ss_pred eeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEE
Confidence 4567788999999999986 468899999875432222223345679999999999999999999999876544457899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++++|.+++.. ...+++.....++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++...
T Consensus 85 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 85 VEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 999999999999853 345788999999999999999999988 9999999999999999999999999876421
Q ss_pred ---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+...|+|||.+.+..++.++|||||||++|||++|+.||.... .... +...... +.. ..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~-~~~~~~~--~~~-------~~ 229 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-AMAA-IFKIATQ--PTK-------PM 229 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-HHHH-HHHHHcC--CCC-------CC
Confidence 13446899999988889999999999999999999999995321 1111 1111111 111 11
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+....+++.+++.+||+ +|.+||++.+++.
T Consensus 230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 230 LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 234556789999999999 5799999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=293.56 Aligned_cols=244 Identities=19% Similarity=0.264 Sum_probs=191.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.++.+|+|+||.||+|+.. ++..+++|.+...... .......+.+|++++++++|||+|++++++.+++ ..++|
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 103 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH--TAWLV 103 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC--chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--eEEEE
Confidence 34667889999999999964 6788999987643222 2233467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++ |+|.+++.. ....++|..+..++.+++.|+.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 104 ~e~~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 104 MEYCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred EeCCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 99996 588777643 3456899999999999999999999988 99999999999999999999999998764332
Q ss_pred ---CCccccchhhh---ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 638 ---AKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 638 ---~~~~~~aPE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
+...|+|||.+ ..+.++.++|||||||++|||++|+.||.... .............+. .....
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--~~~~~~~~~~~~~~~---------~~~~~ 248 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNESPT---------LQSNE 248 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHhccCCC---------CCCcc
Confidence 34568999987 34678999999999999999999999985432 222222222221110 01123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
....+.+++.+||+.+|++||++.++++.+-.
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 45678899999999999999999999986544
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=288.24 Aligned_cols=238 Identities=23% Similarity=0.297 Sum_probs=189.0
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|.|+||.||+++.. +++.+++|.+....... ....+.+.+|++++.+++||||+++++.+...+ ..++||||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR--KNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--NLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh--hhHHHHHHHHHHHHHhCCCcchhHHHHheecCc--EEEEEEecCC
Confidence 478999999999976 48899999876543221 334567899999999999999999999888766 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------- 637 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~------- 637 (772)
+++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.....
T Consensus 77 ~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 77 GGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 99999998643 36899999999999999999999988 99999999999999999999999998653221
Q ss_pred ----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 638 ----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
+...|++||......++.++||||||+++||++||+.||.... ..+.......+......
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-------- 222 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET--PEEIFQNILNGKIEWPE-------- 222 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCCcCCCc--------
Confidence 2346889999888889999999999999999999999996432 33333333222111110
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
....+.++.+++.+||+.+|++||++.++.+.|+
T Consensus 223 -~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 -DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0012577889999999999999999955555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=290.84 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=190.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+.. ++..+++|++...... ....+.+.+|+.++++++||||+++++++..+. ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v 77 (286)
T cd07832 3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE---GGIPNQALREIKALQACQHPYVVKLLDVFPHGS--GFVLV 77 (286)
T ss_pred eEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc---chhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--eeEEE
Confidence 56778899999999999964 6889999988754322 233467999999999999999999999998866 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+ +++|.+++... ...+++..+..++.|+++||+|||+.+ ++|+||||+||++++++.++|+|||++.....
T Consensus 78 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 78 MEYM-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred eccc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9999 99999998643 356899999999999999999999988 99999999999999999999999998764322
Q ss_pred --------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCC-----------
Q 004124 638 --------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQP----------- 696 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~----------- 696 (772)
+...|+|||.+.+. .++.++||||+||++|||+||+.||.... +...+ ...... ..+
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-DIEQL-AIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-HHHHH-HHHHHHcCCCChHHHhhccCc
Confidence 23468999987544 46899999999999999999987775332 22211 111110 000
Q ss_pred --CccccCCc-----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 --LKDIVDPT-----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 --~~~~~d~~-----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+..+. +....++...++.+++.+||+.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000000 01111234578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=297.55 Aligned_cols=254 Identities=19% Similarity=0.260 Sum_probs=189.9
Q ss_pred ccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+|. |.|+||+||+++. .+++.||+|.+...... ....+.+.+|+.+++.++||||+++++++..++ ..++|+|
T Consensus 6 ig~-g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--~~~~v~e 79 (328)
T cd08226 6 IGR-GFCNLTSVYLARHTPTGTLVTVRITDLENCT---EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--WLWVISP 79 (328)
T ss_pred hCC-cccCceeEEEEEEcCCCcEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--ceEEEEe
Confidence 444 4669999999996 47899999987654322 223467899999999999999999999998876 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC------
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------ 635 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------ 635 (772)
|+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+|++||+.+...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 999999999987544456899999999999999999999988 999999999999999999999999743211
Q ss_pred ----------CCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc-----
Q 004124 636 ----------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK----- 698 (772)
Q Consensus 636 ----------~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~----- 698 (772)
..+...|++||.+.+ ..++.++|||||||++|||++|+.||...... ......+.......
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--QMLLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--HHHHHHhcCCCCCCccccc
Confidence 112235899999865 35789999999999999999999999643211 11111111100000
Q ss_pred ------------------------------cccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 004124 699 ------------------------------DIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 745 (772)
Q Consensus 699 ------------------------------~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~ 745 (772)
...+..+. .....+..++.+++.+||+.||++|||+.|+++. ++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 00000000 1123456789999999999999999999999854 44444
Q ss_pred h
Q 004124 746 A 746 (772)
Q Consensus 746 ~ 746 (772)
+
T Consensus 316 ~ 316 (328)
T cd08226 316 E 316 (328)
T ss_pred H
Confidence 4
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=286.89 Aligned_cols=243 Identities=19% Similarity=0.283 Sum_probs=191.4
Q ss_pred cccccCccceEEEEEEEE-cCCcEEEEEEeeecccch-hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRAD-WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~-~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
....+|+|+||.||+|.. .++..+++|.+....... ......+.+.+|++++++++|+||+++++++.+.+ ..++|
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~v 81 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS--HFNLF 81 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--eEEEE
Confidence 345678899999999985 568899999886433211 11234578999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~~-- 636 (772)
|||+++++|.+++.. ...+++.....++.|++.||+|||+.+ ++||||||+||+++.++ .+||+|||++....
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999853 346889999999999999999999998 99999999999998775 69999999875322
Q ss_pred -----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ............. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------~ 228 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT---------T 228 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC---------C
Confidence 123468999999888899999999999999999999999964322 1112111111110 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++....++.+++.+||..+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11233456678899999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=321.79 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=197.6
Q ss_pred cccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC
Q 004124 482 IIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+-..+|+|.||.|++|... ....||||..+.... ....+.+..|+++|+.+ +|+|||.++|+|...+
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~----~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS----SSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccC----cHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 3448899999999999843 145688887754332 24567899999999999 7999999999999865
Q ss_pred CceEEEEEeccCCCChhhhhhhhc------------c--CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQE------------A--EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 618 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~------------~--~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl 618 (772)
..++|+||+.+|+|.++|+..+ . ..++..+.+.++.|||.|++||++.. +|||||.++|||+
T Consensus 376 --~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 376 --PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAARNVLI 451 (609)
T ss_pred --ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhhhhEEe
Confidence 5699999999999999997544 0 13888999999999999999999887 9999999999999
Q ss_pred CCCCcEEEccccCccCCCC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 619 TEDYAAKISDFSFWNNTTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 619 d~~~~~kLsDFGla~~~~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
.++..+||+|||+++.... -...|||||.+....|+.|+|||||||+|||++| |..||..-. ...+
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~ 530 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEE 530 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHH
Confidence 9999999999999973211 1234899999999999999999999999999999 889996411 1222
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
... .++... ....+..+..+++++|+.||+.+|++||++.|+++.++...
T Consensus 531 l~~-~l~~G~---------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 LLE-FLKEGN---------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHH-HHhcCC---------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 222 222211 11234566789999999999999999999999999998853
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=289.09 Aligned_cols=234 Identities=21% Similarity=0.305 Sum_probs=188.6
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
..+|+|++|.||++.. .++..+++|++.... ....+.+.+|+.++++++||||+++++++...+ ..++|+||
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--~~~~v~e~ 97 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--ELWVVMEF 97 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccc-----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--eEEEEEec
Confidence 5677899999999985 467889999875432 122456889999999999999999999988766 67999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+++++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~ 172 (285)
T cd06648 98 LEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172 (285)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence 999999999853 45889999999999999999999988 9999999999999999999999999765321
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.+...|++||...+..++.++|||||||++|||++|+.||...+ .............+. .. ......
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~--~~~~~~~~~~~~~~~-------~~-~~~~~~ 242 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP--PLQAMKRIRDNLPPK-------LK-NLHKVS 242 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC--HHHHHHHHHhcCCCC-------Cc-ccccCC
Confidence 23456899999988889999999999999999999999986432 233333332221110 00 112244
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++.+++.+||+.+|++||++.++++
T Consensus 243 ~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 243 PRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHcc
Confidence 67899999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=290.58 Aligned_cols=237 Identities=19% Similarity=0.303 Sum_probs=187.1
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC---CCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|.|+||.||+|.. .++..+++|.+..... ....+++.+|++++++++ |||++++++++.... ..
T Consensus 4 ~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~--~~ 77 (277)
T cd06917 4 QRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP----DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP--RL 77 (277)
T ss_pred hhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC----chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC--EE
Confidence 4567788999999999996 5688899998764322 223457889999999997 999999999998766 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++++|.+++.. ..+++.....++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++....
T Consensus 78 ~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 999999999999998853 36899999999999999999999988 9999999999999999999999999875432
Q ss_pred ---------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 ---------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.+...|+|||.+.. ..++.++|||||||++|||++|+.||.... ........... ..+.+.
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~--~~~~~~~~~~~-------~~~~~~ 223 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD--AFRAMMLIPKS-------KPPRLE 223 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC--hhhhhhccccC-------CCCCCC
Confidence 23345889998764 457899999999999999999999996432 11211111000 011111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ...+.++.+++.+||+.||++||++.|+++
T Consensus 224 ~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 D--NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred c--ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0 124567889999999999999999999986
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=287.92 Aligned_cols=238 Identities=21% Similarity=0.304 Sum_probs=192.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|+|+||.||+|... ++..+++|++..... ..+.+.+|++.+++++|+||+++++++...+ ..++|
T Consensus 22 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv 93 (286)
T cd06614 22 KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------NKELIINEILIMKDCKHPNIVDYYDSYLVGD--ELWVV 93 (286)
T ss_pred hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--EEEEE
Confidence 55677889999999999976 678899998864432 3467889999999999999999999998876 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++++|.+++.... ..+++..+..++.+++.||+|||+.+ |+|+||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 99999999999986432 47999999999999999999999987 9999999999999999999999999765322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|++||.+.+..++.++|||||||++|||+||+.||..... ........... ..... ...
T Consensus 171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~--~~~~~~~~~~~--~~~~~------~~~ 240 (286)
T cd06614 171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP--LRALFLITTKG--IPPLK------NPE 240 (286)
T ss_pred hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcC--CCCCc------chh
Confidence 134568999999888899999999999999999999999863322 22222211111 11111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+..++.+++.+||+.+|.+||++.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 24567889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=305.14 Aligned_cols=189 Identities=23% Similarity=0.310 Sum_probs=164.0
Q ss_pred cccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CC-----cccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HK-----NFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-Hp-----NIV~l~g~~~~~~ 552 (772)
++|++.+|+|+||.|-||. .++++.||||+++.+. ....+-..|+.+|..++ |. |+|++++|+...+
T Consensus 188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k------~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK------RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEecccccceeEEEEecCCCcEEEEEeeccCh------HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 4788999999999999998 4578999999987543 23356678999999996 43 8999999999988
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEcccc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFS 630 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kLsDFG 630 (772)
+.|||+|.+. -+|+++++.+....++......|+.||+.||.+||+.+ |||+||||+||||.+ ...+||+|||
T Consensus 262 --HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 262 --HLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred --ceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEecc
Confidence 8899999995 59999999888888999999999999999999999988 999999999999964 3579999999
Q ss_pred CccCCCCC------CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC
Q 004124 631 FWNNTTAA------KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 631 la~~~~~~------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
.+...... ...|.|||++.+.+|+.+.||||||||+.||+||..-|.++
T Consensus 337 SSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 337 SSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 98754432 44688999999999999999999999999999997777543
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=285.18 Aligned_cols=241 Identities=18% Similarity=0.224 Sum_probs=184.0
Q ss_pred cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHH-HhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~-L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+.+|.|+||.||+|... +++.+|+|.+....... ......+..|..+ ....+|+||+++++++...+ ..++|+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA--KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--YLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH--HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--eEEEEEe
Confidence 45788999999999864 57899999875432211 1222344555544 44558999999999998776 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 78 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (260)
T cd05611 78 YLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKF 153 (260)
T ss_pred ccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEeecccceeccccccC
Confidence 9999999999853 346888899999999999999999988 9999999999999999999999999876432
Q ss_pred CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHH
Q 004124 637 AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 716 (772)
Q Consensus 637 ~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l 716 (772)
.+...|++||.+.+..++.++||||||+++|||+||+.||.... ..........+...... .....++.++
T Consensus 154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 224 (260)
T cd05611 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET--PDAVFDNILSRRINWPE-------EVKEFCSPEA 224 (260)
T ss_pred CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhcccCCCC-------cccccCCHHH
Confidence 24457899999988889999999999999999999999996432 23333322222111110 1112345778
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 717 LVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 717 ~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.+++.+||+.+|++||++.++.+.|
T Consensus 225 ~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 225 VDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHccCCHHHccCCCcHHHHH
Confidence 9999999999999999876554433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=290.03 Aligned_cols=256 Identities=21% Similarity=0.334 Sum_probs=198.0
Q ss_pred ccccccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||.||+++. .++..++||.+...... ......+.+.+|++++.++ +||||+++++.+..+. .
T Consensus 3 ~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~--~ 79 (288)
T cd05583 3 ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV-QKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT--K 79 (288)
T ss_pred eEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH-hhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--E
Confidence 4567889999999999984 35678999987643211 1123346788999999999 5999999999988766 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++.....++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 80 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 7999999999999999853 346889999999999999999999987 999999999999999999999999987542
Q ss_pred C----------CCCccccchhhhccCC--CCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCcccc
Q 004124 636 T----------AAKTGSAAMELLETSA--VDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~----------~~~~~~~aPE~~~~~~--~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~ 701 (772)
. .+...|++||...+.. .+.++||||||+++|||+||+.||...+. ...++.........+
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 230 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP----- 230 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC-----
Confidence 1 1344688999986654 78899999999999999999999953322 122222322222111
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
.+.....++.+++.+||+.+|++|||+.++.+.|+. |.+...+|+++
T Consensus 231 ------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~----------~~~~~~~~~~~ 277 (288)
T cd05583 231 ------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH----------PFFQGIDWDDL 277 (288)
T ss_pred ------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC----------cccccCCHHHH
Confidence 122344678889999999999999999988776554 45566677766
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=289.61 Aligned_cols=250 Identities=19% Similarity=0.236 Sum_probs=185.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. ++..+++|++...... .......+|+.++.++. |+||+++++++.+......++
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS----LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC----chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 45678899999999999954 6788999987643211 11224457889999985 999999999998763236799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||++ |+|.+++... ...++|..+..++.|++.||+|||+.+ |+||||||+||+++. +.+||+|||+++....
T Consensus 78 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 78 VFELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred EEecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 999996 6888887532 356899999999999999999999988 999999999999999 9999999998764321
Q ss_pred -------CCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcC-----------CC-
Q 004124 638 -------AKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGE-----------QP- 696 (772)
Q Consensus 638 -------~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~-----------~~- 696 (772)
+...|+|||.+. ...++.++|||||||++|||++|+.||...+. +...+........ ..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 234688999764 45678999999999999999999999964331 1111111111000 00
Q ss_pred ---CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 ---LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ---~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........+.......+.++.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000111111122345688999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=292.33 Aligned_cols=250 Identities=20% Similarity=0.285 Sum_probs=189.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|... ++..+++|++...... ....+.+.+|++++++++|+||+++++++..++ ..++|
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv 78 (288)
T cd07833 4 EVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD---EDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLV 78 (288)
T ss_pred eEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc---ccchhHHHHHHHHHHhcCCCCeeehhheEEECC--EEEEE
Confidence 56778899999999999975 5778999987643221 223467899999999999999999999998866 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++++.+..+.. ....+++.....++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 79 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 79 FEYVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred EecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99999877765543 3345899999999999999999999988 99999999999999999999999998764322
Q ss_pred --------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH-HHhhc-----------CCC
Q 004124 638 --------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS-EYLKG-----------EQP 696 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~-~~~~~-----------~~~ 696 (772)
+...|+|||.+.+. .++.++||||||+++|||++|+.||.........+.. ..... ...
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 23458999998877 8899999999999999999999998643221111110 00000 000
Q ss_pred C-----ccccCCcc--ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 L-----KDIVDPTL--KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~-----~~~~d~~l--~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....++.. ..++..++.++.+++++||..+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 00000000 0112233678999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=291.74 Aligned_cols=248 Identities=18% Similarity=0.191 Sum_probs=184.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++.+|+|+||.||+|... ++..+++|.+..+.... ....+.+|++++++++|+||+++++++..++ ..++|
T Consensus 8 ~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv 81 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG----VPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTFV 81 (291)
T ss_pred EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC----CcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--eEEEE
Confidence 56788999999999999864 68899999886543221 2245778999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ ++|.+++... ...+.+.....++.|++.||+|||+.+ |+||||||+||+++.++++||+|||+++...
T Consensus 82 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred Eeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 99995 7887776432 345788888899999999999999988 9999999999999999999999999876422
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCc----------
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLK---------- 698 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~---------- 698 (772)
.+...|+|||.+.+ ..++.++|||||||++|||+||+.||....... +........ ..+..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF-EQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH-HHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12446889998765 457889999999999999999999996433221 111111100 00000
Q ss_pred ----cccC----Ccccccc--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 ----DIVD----PTLKSFQ--ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ----~~~d----~~l~~~~--~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.... ....... .....++.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000 0000000 011357789999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=286.18 Aligned_cols=251 Identities=21% Similarity=0.251 Sum_probs=189.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcCCC---
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDEP--- 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~~~--- 553 (772)
++++.+|.|+||.||+|+.+ ++..+++|.+...... ......+.+|+.++.++ +|+||+++++++...+.
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE---EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEecccccc---chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 45677889999999999976 4889999988654322 12234566787776655 69999999999987652
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...+++|||++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccCCCEEEeccCcce
Confidence 12799999997 58988886544446899999999999999999999988 9999999999999999999999999875
Q ss_pred CCCC--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC---------
Q 004124 634 NTTA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP--------- 696 (772)
Q Consensus 634 ~~~~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~--------- 696 (772)
.... +...|++||.+.+..++.++|||||||++|||+||+.||.... ..+...+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS--EADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC--hHHHHHHHHHHcCCCChHhcCCC
Confidence 4322 2345889999988899999999999999999999998886432 22222222211000
Q ss_pred -------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 -------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 -------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.............+....++.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000001111122345577889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=292.04 Aligned_cols=238 Identities=22% Similarity=0.313 Sum_probs=189.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|.. .++..+++|.+..... ...+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv 94 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-----PKKELIINEILVMRENKHPNIVNYLDSYLVGD--ELWVV 94 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-----hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--cEEEE
Confidence 5677889999999999985 4678899998754321 22457889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
+||+++|+|.+++.. ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 95 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 999999999999853 35789999999999999999999988 9999999999999999999999999865322
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|++||.+....++.++|||||||++||+++|+.||...... ..+........+ .. ....
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--~~~~~~~~~~~~-------~~-~~~~ 239 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIATNGTP-------EL-QNPE 239 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--hheeehhcCCCC-------CC-CCcc
Confidence 2334589999998888999999999999999999999999643321 111111111110 00 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.+++.+||+.+|++||++.+++..
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 345678899999999999999999999864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=290.78 Aligned_cols=249 Identities=17% Similarity=0.250 Sum_probs=186.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|.+|+||+|+.. +++.+++|++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 5 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 79 (294)
T PLN00009 5 EKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLV 79 (294)
T ss_pred EEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---ccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--eEEEE
Confidence 56788899999999999965 6788999987543221 123356889999999999999999999998776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~~~~-- 636 (772)
|||++ ++|.+++.......+++.....++.||+.||+|||+.+ |+||||||+||++++ ++.+||+|||++....
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 99996 58888875444444678888899999999999999987 999999999999985 5679999999876431
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccc-------
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDI------- 700 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~------- 700 (772)
.+...|++||.+.+ ..++.++|||||||++|||+||+.||..... ..... ..... ..+....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE-IDELF-KIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHH-HHHHHhCCCChhhccccccc
Confidence 12346899998765 4578999999999999999999999964321 12211 11110 0111110
Q ss_pred ----------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 ----------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ----------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.........+...+++.+++.+|++.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001111112234567889999999999999999999986
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=300.39 Aligned_cols=257 Identities=19% Similarity=0.254 Sum_probs=189.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ceE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~~ 556 (772)
++++.+|+|+||.||+|+. .++..||+|.+..... ......+.+|+.++++++||||+++++++..... ...
T Consensus 8 ~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 8 QNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH----QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred EEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 6778899999999999985 4688999998753221 2234568899999999999999999998765431 247
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++|+||++ ++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~lv~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 99999996 48877763 346899999999999999999999988 9999999999999999999999999875432
Q ss_pred ------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCC--CCccc
Q 004124 637 ------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQ--PLKDI 700 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~--~~~~~ 700 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+.. ........+.... ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 12345899998644 56899999999999999999999999643210 0011111111000 00000
Q ss_pred cCC-------------cc--ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 701 VDP-------------TL--KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 701 ~d~-------------~l--~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
.+. .. ....+....++.+++.+||+.+|++||++.|+++. ++.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 000 00 00112235678999999999999999999999986 5555443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=294.32 Aligned_cols=253 Identities=18% Similarity=0.248 Sum_probs=186.2
Q ss_pred ccccccCccceEEEEEEEEcC---CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS---GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~---~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
++++.+|+|+||.||+|+... +..+|+|.+...... .....+.+.+|++++.+++||||+++++++........+
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ--YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc--ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 467789999999999999754 789999988753211 112235678899999999999999999999887434789
Q ss_pred EEEeccCCCChhhhhhhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC----CCcEEEcccc
Q 004124 558 MVFEYSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE----DYAAKISDFS 630 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~----~~~~kLsDFG 630 (772)
+||||+++ +|.+++.... ...++......++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 99999975 6777664321 236888899999999999999999988 999999999999999 9999999999
Q ss_pred CccCCCC------------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-----------HHH
Q 004124 631 FWNNTTA------------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL-----------ENW 686 (772)
Q Consensus 631 la~~~~~------------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-----------~~~ 686 (772)
+++.... ++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 8764321 2345899998765 457899999999999999999999996433221 000
Q ss_pred HHHHhhcC-----------CCCcc--------ccC-Cccccc-cH--HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 687 ASEYLKGE-----------QPLKD--------IVD-PTLKSF-QE--NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 687 ~~~~~~~~-----------~~~~~--------~~d-~~l~~~-~~--~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. .+... ..... ... ..+... .. ....++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 238 FE-VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HH-HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00000 00000 000 000000 00 23457889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=290.83 Aligned_cols=251 Identities=18% Similarity=0.241 Sum_probs=186.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCC---ce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~---~~ 555 (772)
++...+|+|+||.||+|... ++..|++|+....... ......+.+|++++++++ ||||+++++++...+. ..
T Consensus 4 ~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 4 EKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred eEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46678899999999999965 6788999987553321 122356888999999995 6999999998876542 12
Q ss_pred EEEEEeccCCCChhhhhhhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSF 631 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGl 631 (772)
.++||||+++ +|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeeccc
Confidence 6999999985 8988876432 246899999999999999999999988 999999999999998 89999999998
Q ss_pred ccCCC---------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCccc
Q 004124 632 WNNTT---------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDI 700 (772)
Q Consensus 632 a~~~~---------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~ 700 (772)
++... .+...|+|||.+.+ ..++.++|||||||++|||+||+.||.... ...+ ........ .+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 235 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS-ELQQ-LLHIFKLLGTPTEQV 235 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC-HHHH-HHHHHHHhCCCChhh
Confidence 76422 12345899998754 457899999999999999999999996432 2222 22221110 000000
Q ss_pred c----------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 V----------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~----------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ...+....+....++.+++.+||+.+|++||++.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00001111235577899999999999999999999875
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=292.65 Aligned_cols=250 Identities=20% Similarity=0.218 Sum_probs=188.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.. ++..||+|.+....... .....+.+|++++++++|+||+++++++.+......++|
T Consensus 10 ~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 10 EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 66788899999999999964 68899999886543221 112346789999999999999999999876543357999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+. ++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 87 ~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 87 MEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 99996 5888887532 356899999999999999999999998 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CCccc--------
Q 004124 638 -------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKDI-------- 700 (772)
Q Consensus 638 -------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~-------- 700 (772)
....|+|||.+.+ ..++.++||||+||++|||++|+.||...+ ..+.......... +....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS--EIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCChhhchhhhccc
Confidence 1335899998764 567899999999999999999999996432 2222222221100 00000
Q ss_pred ----c--C-Ccc---ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 ----V--D-PTL---KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ----~--d-~~l---~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. . ... ........+++.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 0 000 0001123567889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=296.49 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=189.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+.+|.|+||.||+|... ++..+++|++...... ......+.+|+.++.++ +||||+++++++...+....++
T Consensus 10 ~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 10 EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN---ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred HHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc---chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 55677889999999999965 5788999987543211 12234677899999999 9999999999987654446799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||++ ++|..++.. ..++|..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 87 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 87 VFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred Eecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 999997 599888753 26889999999999999999999988 99999999999999999999999998763321
Q ss_pred -------------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC-C-----
Q 004124 638 -------------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP-L----- 697 (772)
Q Consensus 638 -------------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~-~----- 697 (772)
++..|++||.+.. ..++.++|||||||++|||+||+.||..... .+........... .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST--LNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHH
Confidence 2335899997644 5678999999999999999999999963321 1111111111000 0
Q ss_pred -----------ccccCC---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 698 -----------KDIVDP---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 698 -----------~~~~d~---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
....+. .........+.++.+++.+||+.+|++|||+.++++. ++.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 000000 0011112245778999999999999999999999975 4554333
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=296.91 Aligned_cols=262 Identities=16% Similarity=0.194 Sum_probs=193.5
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+.+++.+|.|+||+||+|+. .++..|++|.+...... ......+.+|+.++++++|+||+++++++..... ..
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN---RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc---cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 36678899999999999985 46789999987643211 2223567789999999999999999998865421 24
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+. ++|.+++. ....+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999996 78988875 3356899999999999999999999988 999999999999999999999999987643
Q ss_pred CC---------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-HHHHHHHhhcCC--C------
Q 004124 636 TA---------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL-ENWASEYLKGEQ--P------ 696 (772)
Q Consensus 636 ~~---------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~~~~~~~~~~~--~------ 696 (772)
.. ++..|+|||.+.. ..++.++|||||||++|||++|+.||...+... ............ .
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07858 159 SEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRN 238 (337)
T ss_pred CCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCc
Confidence 22 2346899998754 568999999999999999999999996432110 000000000000 0
Q ss_pred ---------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhcCC
Q 004124 697 ---------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEP 749 (772)
Q Consensus 697 ---------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~~~ 749 (772)
.....++......+..+.++.+++.+||+.+|++|||++|+++. +..+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 239 EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred hhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCccc
Confidence 00000111111223456778999999999999999999999977 666554443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=284.97 Aligned_cols=236 Identities=19% Similarity=0.224 Sum_probs=180.6
Q ss_pred cCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHH---HHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 486 FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKI---DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 486 lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei---~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+|+|+||.||+|+. .+++.||+|.+..+.... ......+..|. +.++...||||+++++++.+.+ ..++|||
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~e 77 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFILD 77 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeecccccc--chhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--EEEEEEe
Confidence 67899999999986 457899999886543221 11122233443 3455568999999999998776 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
|+++|+|..++.. ...+++..+..++.|+++|++|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 78 ~~~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 153 (278)
T cd05606 78 LMNGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 153 (278)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCc
Confidence 9999999988753 356899999999999999999999988 9999999999999999999999999875322
Q ss_pred --CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 --AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.+...|+|||.+..+ .++.++||||+||++|||++|+.||.................. +. ..+...+
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~s 223 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-------AV---ELPDSFS 223 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc-------CC---CCCCcCC
Confidence 245678999998644 6899999999999999999999999644221111111111110 11 1122345
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.++.+++.+|+..+|++|| ++.|+++
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 7889999999999999999 8888874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=288.79 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=187.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+.+|.|+||+||+|+.. +++.+++|++...... .......+|+..+.+++ |+||+++++++..++ ..++
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~l 75 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS----WEECMNLREVKSLRKLNEHPNIVKLKEVFREND--ELYF 75 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc----hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--cEEE
Confidence 45677899999999999975 4778999987643221 12234567899999999 999999999998866 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||+ +|+|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+||++++++.+||+|||+++....
T Consensus 76 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 99999 889999887554457899999999999999999999988 99999999999999999999999998764332
Q ss_pred -------CCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCC------------
Q 004124 638 -------AKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQ------------ 695 (772)
Q Consensus 638 -------~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~------------ 695 (772)
+...|+|||.+. ...++.++||||||+++|||++|+.||...... +....... +..
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI--DQLYKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH--HHHHHHHHhcCCCChhhhhhHhhhh
Confidence 244688999874 456789999999999999999999998643321 11111100 000
Q ss_pred -CCc----cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 -PLK----DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 -~~~----~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... ......+....+....++.+++.+||+.+|++||+++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 00000111111122467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=294.58 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=188.9
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++++|.||-+.||++...+.+.+|+|++.....+ ......|..|+..|.++ .|.+||++|+|-..++ ..||
T Consensus 363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D---~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~--~lYm 437 (677)
T KOG0596|consen 363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEAD---NQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG--YLYM 437 (677)
T ss_pred hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcC---HHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc--eEEE
Confidence 4678999999999999999888888999887655433 34456799999999999 5999999999998877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||- .-||..+|........+| .+..+..||+.|+.+.|+.+ |||.||||.|+|+-+ |.+||+|||+|+..
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPD 512 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEe-eeEEeeeechhcccCcc
Confidence 99987 459999997655555567 66789999999999999998 999999999999864 68999999998643
Q ss_pred --------CCCCccccchhhhcc-----------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 636 --------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
..|+..||+||.+.. .+.+.+|||||+|||||+|+.|+.||. ....... .
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~----~~~n~~a-------K 581 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG----QIINQIA-------K 581 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH----HHHHHHH-------H
Confidence 456778999998732 236789999999999999999999994 2221111 1
Q ss_pred CccccCCccc-cccHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 LKDIVDPTLK-SFQEN-VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 ~~~~~d~~l~-~~~~~-~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+..+.||... ++++- ...++.++|+.||++||++||+..|+++.
T Consensus 582 l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2233344221 11110 11238999999999999999999999863
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=288.43 Aligned_cols=248 Identities=20% Similarity=0.272 Sum_probs=188.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|++|.||+|+.. ++..+++|.+...... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 76 (284)
T cd07836 3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE----GTPSTAIREISLMKELKHENIVRLHDVIHTEN--KLMLV 76 (284)
T ss_pred eEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc----cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--cEEEE
Confidence 56778899999999999975 6788999988654321 12346778999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 560 FEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++...
T Consensus 77 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 77 FEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred EecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 99998 48888875432 246899999999999999999999988 9999999999999999999999999875321
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC-----------
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP----------- 696 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~----------- 696 (772)
.++..|++||.+.+ ..++.++|||||||++|||++|+.||..... .+......... .+
T Consensus 154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN--EDQLLKIFRIMGTPTESTWPGISQL 231 (284)
T ss_pred ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCChhhHHHHhcC
Confidence 12346899998754 4578999999999999999999999964321 21111111100 00
Q ss_pred --Cc----cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 --LK----DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 --~~----~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. ...+.......+..+.++.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 00000011112234567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=287.92 Aligned_cols=250 Identities=22% Similarity=0.261 Sum_probs=188.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|+||.||+|+.. ++..+++|++..... .......+.+|++++++++|+|++++++++........++|
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE---KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc---cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 46778899999999999976 578899999876531 12234568899999999999999999999987622268999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||++ ++|.+++... ...+++..+..++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++.....
T Consensus 79 ~e~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 79 FEYMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ecccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 99997 4888887532 246899999999999999999999988 99999999999999999999999998764322
Q ss_pred --------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-C----Ccccc--
Q 004124 638 --------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-P----LKDIV-- 701 (772)
Q Consensus 638 --------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~----~~~~~-- 701 (772)
....|+|||.+.+ ..++.++||||||+++|||+||+.||...+. ............ + .....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE--LEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchhhccccccc
Confidence 1345899997654 4678999999999999999999999964432 222222211100 0 00000
Q ss_pred ------------CCccccccHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 ------------DPTLKSFQEN-VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 ------------d~~l~~~~~~-~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+...... ++.++.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000011111 2567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=296.70 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=187.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC--CceEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE--PFTRM 557 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~--~~~~~ 557 (772)
++.+.+|.|+||.||+|+.. ++..|++|++...... ....+.+.+|+.++++++||||+++++++.... ....+
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 8 KPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred eeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 56678899999999999854 6889999988643221 123456788999999999999999999876432 22579
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
+||||+. |+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 85 VVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 9999995 689888853 345899999999999999999999988 9999999999999999999999999875321
Q ss_pred ------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc--
Q 004124 637 ------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV-- 701 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-- 701 (772)
.+...|++||.+.. ..++.++|||||||++|||++|+.||...+............+ .+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g-~~~~~~~~~ 238 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG-SPSEEVLNR 238 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC-CChhHhhhh
Confidence 23346789998754 5689999999999999999999999964432111000000011 0000000
Q ss_pred -----------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 702 -----------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 -----------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+..........+.++.+++.+||+.+|++||++.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 239 IGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000011112346789999999999999999999998874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=279.63 Aligned_cols=241 Identities=22% Similarity=0.288 Sum_probs=193.2
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+...+|+|++|.||+|+.. ++..+++|+....... ....+.+.+|++++++++|+||+++++.+........++|+
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3456788999999999976 6888999987654321 23457899999999999999999999999876222679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++... ..+++..+..++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 999999999998643 37899999999999999999999987 99999999999999999999999997653322
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
+...|.+||......++.++||||||+++|||++|+.||.... +........... ......+
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~---------~~~~~~~ 226 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-NPMAALYKIGSS---------GEPPEIP 226 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-chHHHHHhcccc---------CCCcCCC
Confidence 3346889999988889999999999999999999999996544 122211111110 0111223
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....++.+++.+|++.+|++||++.|+++
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 344678999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=284.99 Aligned_cols=240 Identities=20% Similarity=0.321 Sum_probs=186.7
Q ss_pred ccccccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|.|+||.||+++. .+|..+|+|.+....... .....+.+.+|++++.++ +|+||+++++++..+. .
T Consensus 3 ~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~ 79 (290)
T cd05613 3 ELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT--K 79 (290)
T ss_pred eeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh-cchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--e
Confidence 4667889999999999986 367889999876432111 122346788999999999 5999999999988766 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++.....++.|+++||+|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 80 LHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 7999999999999999853 346888888999999999999999988 999999999999999999999999987643
Q ss_pred CC----------CCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcCCCCcccc
Q 004124 636 TA----------AKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~~----------~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.. +...|++||.... ..++.++||||||+++|||+||+.||...+ ....++.........+
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 230 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----- 230 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC-----
Confidence 22 3446899998764 346789999999999999999999996332 2233333333222221
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIA 738 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl 738 (772)
.+......+.+++.+||+.+|++|| ++.+++
T Consensus 231 ------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~ 266 (290)
T cd05613 231 ------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266 (290)
T ss_pred ------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence 1223446788999999999999997 555554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=290.15 Aligned_cols=249 Identities=12% Similarity=0.138 Sum_probs=176.5
Q ss_pred cccccccCccceEEEEEEEEcCC----cEEEEEEeeecccchhhhh------HHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKN------LESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~----~~vaVK~~~~~~~~~~~~~------~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
+++.+.+|+|+||+||+|+..++ ..+++|...........+. .......+...+..++|+||+++++++.
T Consensus 14 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~ 93 (294)
T PHA02882 14 WKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGS 93 (294)
T ss_pred eEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeee
Confidence 47788899999999999997644 3455554332221110000 0112334455667789999999999766
Q ss_pred cCCC--ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004124 550 EDEP--FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 550 ~~~~--~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLs 627 (772)
.... +..++++|++. .++.+.+.. ....++.....|+.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 94 FKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred EecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCcEEEE
Confidence 5432 24578888874 366655532 233578888999999999999999988 9999999999999999999999
Q ss_pred cccCccCC----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH--HHHH-
Q 004124 628 DFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE--NWAS- 688 (772)
Q Consensus 628 DFGla~~~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~--~~~~- 688 (772)
|||+++.. ..++..|+|||...+..++.++|||||||++|||+||+.||........ ....
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 99997532 1245678999999999999999999999999999999999975432211 1000
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
..... +..+.. .....++++.+++..||..+|++||++.++.+.|
T Consensus 249 ~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 249 DFIKR------LHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHH------hhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 01110 000000 0122357789999999999999999999998865
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=281.09 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=197.2
Q ss_pred cccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 482 IIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
....+.+|.||.||+|.|.+ .+.|.||.++. ..++.....|.+|--.+..+.|||+..+.|++.+... .
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~----~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~ 362 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ----HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-T 362 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh----cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-c
Confidence 34456789999999997653 34455554432 2334456779999999999999999999999987543 5
Q ss_pred EEEEEeccCCCChhhhhhhh------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQ------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
.+++|.++.-|+|..+|... ..+.++-.+...++.|++.|++|||.++ |||.||..+|++||+..++||+|=
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhheeEEeccc
Confidence 78999999999999999732 2345777788899999999999999998 999999999999999999999999
Q ss_pred cCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 630 SFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
.+++....+ ...||++|.+....|+.++|||||||+||||+| |+.||- +-+..+. ..++++...+
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya--eIDPfEm-~~ylkdGyRl 517 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA--EIDPFEM-EHYLKDGYRL 517 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc--ccCHHHH-HHHHhcccee
Confidence 998865543 346899999999999999999999999999999 999984 2333332 2333332222
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. -+-+++++++.+|..||+.+|++||++++++.-|.+...
T Consensus 518 a---------QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 518 A---------QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred c---------CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 2 234688999999999999999999999999999987644
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=286.73 Aligned_cols=248 Identities=19% Similarity=0.308 Sum_probs=190.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|.|++|.||+|+.. ++..+++|.+...... ......+.+|++++++++|+||+++++++..++ ..++|
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v 76 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES---EGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--DLYLV 76 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--CEEEE
Confidence 45678899999999999864 6788999987654322 233467889999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+||+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.+.....
T Consensus 77 ~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 77 FEFMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred EeccCC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 999975 888887543 357899999999999999999999988 99999999999999999999999998653322
Q ss_pred -------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCc----------
Q 004124 638 -------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLK---------- 698 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~---------- 698 (772)
+...|++||.+.+. .++.++||||||+++|||+||+.||...+. ...+ ...... ..+..
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQL-FKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHH-HHHHHHcCCCchHhcccchhhh
Confidence 23457899998766 789999999999999999999999864331 1111 111110 00000
Q ss_pred --------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 --------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 --------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.......+..+.++.+++.+||+.||.+||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00011111122346678999999999999999999999975
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=313.05 Aligned_cols=255 Identities=15% Similarity=0.207 Sum_probs=178.4
Q ss_pred cccccccCccceEEEEEEEEcCC--cEEEEEEe-------------eecccchhhhhHHHHHHHHHHHHhcCCCCcccce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSG--VEIAVTST-------------SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL 544 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~--~~vaVK~~-------------~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l 544 (772)
+++++.+|+|+||+||+|..+.. ...++|.+ ..+. ..........+.+|+++|++++|||||++
T Consensus 150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 228 (501)
T PHA03210 150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR-VKAGSRAAIQLENEILALGRLNHENILKI 228 (501)
T ss_pred cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH-hhcchHHHHHHHHHHHHHHhCCCCCcCcE
Confidence 47889999999999999875422 11111100 0000 00112234568899999999999999999
Q ss_pred eEEEEcCCCceEEEEEeccCCCChhhhhhhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004124 545 IGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE---AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 545 ~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
++++...+ ..++|+|++. ++|.+++.... ...........|+.|++.||+|||+++ ||||||||+|||++.+
T Consensus 229 ~~~~~~~~--~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~~ 303 (501)
T PHA03210 229 EEILRSEA--NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNCD 303 (501)
T ss_pred eEEEEECC--eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC
Confidence 99998877 6799999984 57877764321 122335566789999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCC----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCc-ccCCCCCHHHHHHHH
Q 004124 622 YAAKISDFSFWNNT----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRIS-YSIENGSLENWASEY 690 (772)
Q Consensus 622 ~~~kLsDFGla~~~----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P-~~~~~~~~~~~~~~~ 690 (772)
+.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||++|+.+ +..............
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999998532 1355678999999999999999999999999999998754 433332222222222
Q ss_pred hhcCCCC-ccccCC-----------cc----ccccH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 691 LKGEQPL-KDIVDP-----------TL----KSFQE-----NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 691 ~~~~~~~-~~~~d~-----------~l----~~~~~-----~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....... .+..+. .. ...+. ....++.+++.+|++.||++|||+.|+++.
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 2111000 000000 00 00000 122456778999999999999999999863
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=288.77 Aligned_cols=241 Identities=20% Similarity=0.277 Sum_probs=188.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..++++|+|+||+||+|+.. ++..+++|++....... ......+.+|++++++++|||++++++++.+.+ ..++|
T Consensus 24 ~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 99 (313)
T cd06633 24 VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT--NEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--TAWLV 99 (313)
T ss_pred hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc--hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEE
Confidence 44567899999999999864 67889998876433221 233457889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ |++.+++.. ....+++..+..++.|++.|++|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 100 ~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~ 175 (313)
T cd06633 100 MEYCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN 175 (313)
T ss_pred EecCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCCCCEEEeecCCCcccCCCC
Confidence 99996 678777753 3456899999999999999999999988 9999999999999999999999999876432
Q ss_pred --CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 --AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 --~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.+...|+|||.+. ...++.++|||||||++|||++|+.||...+ .............+ ... ...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~--~~~~~~~~~~~~~~--~~~-------~~~ 244 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNDSP--TLQ-------SNE 244 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcCCC--CCC-------ccc
Confidence 2345689999873 4668899999999999999999999986432 22222222222111 111 122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.+++.+||+.+|++||++.+++..
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 34568889999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=288.03 Aligned_cols=242 Identities=20% Similarity=0.253 Sum_probs=188.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..++.+|+|+||.||+|+.. ++..+++|.+...... ......++.+|++++++++|+|++++++++.... ..++|
T Consensus 18 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 93 (308)
T cd06634 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLV 93 (308)
T ss_pred HHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--eeEEE
Confidence 34577889999999999964 5678899887543211 1223457889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+. |++.+++.. ....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 169 (308)
T cd06634 94 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169 (308)
T ss_pred EEccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCCCcEEECCcccceeecCcc
Confidence 99996 688777643 2345899999999999999999999988 9999999999999999999999999876432
Q ss_pred --CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 --AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 --~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.+...|+|||.+. ...++.++|||||||++|||++|+.||.... ..+.......+..+ .. ....
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~-------~~--~~~~ 238 (308)
T cd06634 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNESP-------AL--QSGH 238 (308)
T ss_pred cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc--HHHHHHHHhhcCCC-------Cc--Cccc
Confidence 2345789999874 4568899999999999999999999985332 12222222221111 00 1123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
....+.+++.+||+.+|++||++.++++..
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 456788999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=288.15 Aligned_cols=241 Identities=20% Similarity=0.312 Sum_probs=185.3
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+.+|.|+||.||+|+.+. +..+|||.+...... ....++.+|++++.+.. ||||+++++++.... ..++
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~ 91 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK----EENKRILMDLDVVLKSHDCPYIVKCYGYFITDS--DVFI 91 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh----HHHHHHHHHHHHHHhccCCCchHhhheeeecCC--eEEE
Confidence 567888999999999999875 888999988644321 22345677887777774 999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
||||++ +++.+++.. ....+++..+..++.|++.||+|||+ .+ |+||||||+||++++++.+||+|||++.....
T Consensus 92 v~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 92 CMELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EeeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 999985 577766543 23478999999999999999999997 46 99999999999999999999999998754321
Q ss_pred --------CCccccchhhhccCC----CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 638 --------AKTGSAAMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~----~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
+...|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+..........+. .
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~--~----- 239 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTKILQEEPPS--L----- 239 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHHHhcCCCCC--C-----
Confidence 234689999986543 889999999999999999999999643221 22222333222111 0
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
. ....+.+++.+++.+||+.||++||++.++++.
T Consensus 240 ~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 P-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 011245678999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=276.05 Aligned_cols=239 Identities=22% Similarity=0.357 Sum_probs=191.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|.|++|.||++... ++..+++|+...... ...+.+.+|++.+++++|+||+++++++...+ ..+++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l~ 75 (253)
T cd05122 3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--ELWIV 75 (253)
T ss_pred eeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEE
Confidence 34567889999999999975 678899998865432 23467999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
+||+++++|.+++... ...+++..+..++.+++.||+|||+.+ ++||||+|+||++++++.+||+|||.+.....
T Consensus 76 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 76 MEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred EecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999999998543 256899999999999999999999987 99999999999999999999999998764433
Q ss_pred ------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 638 ------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 638 ------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
+...|++||......++.++||||||+++|||++|+.||...+. .......... ......+ ...
T Consensus 153 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~--~~~~~~~------~~~ 222 (253)
T cd05122 153 ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP--MKALFKIATN--GPPGLRN------PEK 222 (253)
T ss_pred cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch--HHHHHHHHhc--CCCCcCc------ccc
Confidence 24468899999888899999999999999999999999964321 1211111111 1111111 111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2567899999999999999999999875
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=279.24 Aligned_cols=240 Identities=21% Similarity=0.320 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||+++.. ++..+++|.+...... .....++.+|++++++++|+||+++++++.... ..++|
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v 77 (256)
T cd08530 3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS---QKEREDAVNEIRILASVNHPNIISYKEAFLDGN--KLCIV 77 (256)
T ss_pred eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc---HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--EEEEE
Confidence 56778899999999999854 6788999987643322 233467889999999999999999999988776 68999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++++|.+++... ....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9999999999998642 2356899999999999999999999988 9999999999999999999999999875432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.+...|++||...+..++.++|+||||+++|||++|+.||...+ ..+.......+. ....+.
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~----------~~~~~~ 223 (256)
T cd08530 156 NMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--MQDLRYKVQRGK----------YPPIPP 223 (256)
T ss_pred CCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCC----------CCCCch
Confidence 23457899999988889999999999999999999999996432 222222222111 111223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||+.+|++||++.|+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 55678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=293.40 Aligned_cols=250 Identities=19% Similarity=0.298 Sum_probs=187.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|+.. +++.+|+|.+...... ......+.+|++++++++||||+++++++..... .
T Consensus 18 y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 18 YQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN---VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred eEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC---hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 367788999999999999954 7889999987532211 2233567889999999999999999998865431 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+. ++|.+.+.. .+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred cEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 4699999995 588887742 2888899999999999999999988 99999999999999999999999999864
Q ss_pred CCC--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHH-----------------
Q 004124 635 TTA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE----------------- 689 (772)
Q Consensus 635 ~~~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~----------------- 689 (772)
... ++..|+|||.+.+..++.++|||||||++|||++|+.||...+. ...|...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhh
Confidence 322 33468999999999999999999999999999999999964321 1111110
Q ss_pred ----HhhcCC-----CCccccCCccc-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 690 ----YLKGEQ-----PLKDIVDPTLK-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 690 ----~~~~~~-----~~~~~~d~~l~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...... ++.+....... ........++.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 00011000000 0011345678899999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.3e-32 Score=280.45 Aligned_cols=240 Identities=23% Similarity=0.370 Sum_probs=195.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|+||.||++... ++..+++|++...... ....+.+.+|++++++++|+|++++++.+...+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~~lv 77 (258)
T cd08215 3 EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS---EKEREDALNEVKILKKLNHPNIIKYYESFEEKG--KLCIV 77 (258)
T ss_pred eEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC---hHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--EEEEE
Confidence 45677889999999999965 5788999988654321 234567899999999999999999999988775 67999
Q ss_pred EeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 560 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
+||+++++|.+++.... ...+++.....++.+++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 99999999999986543 467999999999999999999999988 99999999999999999999999998754322
Q ss_pred ---------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 ---------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
+...|++||......++.++||||+|+++|||++|+.||...+ ..+......... ....
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~----------~~~~ 223 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--LLELALKILKGQ----------YPPI 223 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--HHHHHHHHhcCC----------CCCC
Confidence 3446899999888889999999999999999999999995432 333333332221 1112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+.....++.+++.+||..+|++||++.|+++
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2244567889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=293.41 Aligned_cols=258 Identities=16% Similarity=0.243 Sum_probs=190.8
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ce
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~ 555 (772)
.+++.+|+|+||.||+|+. .++..+|+|++...... ......+.+|++++++++||||+++++++..... ..
T Consensus 18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS---EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc---ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 5678899999999999996 46889999987643211 2233568899999999999999999999875431 24
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+.. +|..++ ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 95 FYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred EEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 5899999964 676654 235889999999999999999999988 999999999999999999999999998754
Q ss_pred CC------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCc---------
Q 004124 636 TA------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLK--------- 698 (772)
Q Consensus 636 ~~------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~--------- 698 (772)
.. +...|+|||.+.+ ..++.++|||||||++|||++|+.||...+ ....+....... .+..
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T cd07879 168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGPEFVQKLEDK 245 (342)
T ss_pred CCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHhccc
Confidence 32 2345789998765 468899999999999999999999996432 111111111100 0000
Q ss_pred ----------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhcCCC
Q 004124 699 ----------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEPD 750 (772)
Q Consensus 699 ----------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~~~~ 750 (772)
......+....+....++.+++.+||+.||++||++.|++.. ++..+...+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~ 309 (342)
T cd07879 246 AAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEE 309 (342)
T ss_pred chHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccccccc
Confidence 000000000111234568899999999999999999999955 7777654443
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=285.23 Aligned_cols=234 Identities=22% Similarity=0.304 Sum_probs=186.5
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
..+|+|+||.||++.. .++..+++|++.... ......+.+|+.++++++|+||+++++++...+ ..++||||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--EEEEEEec
Confidence 4578899999999986 468889999875332 223467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------ 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------ 636 (772)
+++++|.+++. ...+++.....++.|++.|++|||+.+ ++||||||+||++++++.++|+|||++....
T Consensus 99 ~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 99 LEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEcccccceecccccccc
Confidence 99999998874 235799999999999999999999988 9999999999999999999999999865322
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.+...|++||...+..++.++|||||||++|||++|+.||.... ..+.......... +... ......
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--~~~~~~~~~~~~~-------~~~~-~~~~~~ 243 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP-------PKLK-NLHKVS 243 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhCC-------cccC-CcccCC
Confidence 12346899999888889999999999999999999999986332 2222221111111 1110 012234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++.+++.+||+.+|.+||++.|+++
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 56788999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=288.00 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=186.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC-------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------- 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------- 552 (772)
++.+.+|+|+||.||+|+.. ++..+++|.+...... ......+.+|++++++++||||+++++++.+..
T Consensus 10 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 10 DIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK---EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred heeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc---cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 56678899999999999975 5788999988654322 122356788999999999999999999987643
Q ss_pred -CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004124 553 -PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 553 -~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGl 631 (772)
....++|+||+++ ++..++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCcEEeCcccc
Confidence 1257999999975 777776432 346899999999999999999999988 99999999999999999999999998
Q ss_pred ccCCCC----------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCC--C
Q 004124 632 WNNTTA----------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQP--L 697 (772)
Q Consensus 632 a~~~~~----------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~--~ 697 (772)
+..... ....|++||.+.+ ..++.++|||||||++|||++|+.||...+.. ..+.+.....+..+ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 764321 1335889998754 45789999999999999999999999643211 11111111111100 0
Q ss_pred ccc--------cCC------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 KDI--------VDP------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 ~~~--------~d~------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+ .++ .........+.++.+++.+||+.+|++||++.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 000 000111224567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=287.60 Aligned_cols=251 Identities=18% Similarity=0.212 Sum_probs=183.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~------ 553 (772)
++++.+|+|+||.||+|+.. +++.+|+|.+...... ......+.+|++++++++||||++++++|...+.
T Consensus 15 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 15 EKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred EEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc---CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 67788999999999999965 6889999987643321 1223456789999999999999999999876431
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...++||||+. ++|.+++.. ....+++.....++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 24599999996 588887753 2346899999999999999999999988 9999999999999999999999999875
Q ss_pred CCCC-------------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-HHHHHHHhhcCCCC-
Q 004124 634 NTTA-------------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSL-ENWASEYLKGEQPL- 697 (772)
Q Consensus 634 ~~~~-------------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~~~~~~~~~~~~~- 697 (772)
.... +...|+|||.+.+. .++.++||||||+++|||+||+.||....... ....... .+..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL-CGSITPE 246 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChh
Confidence 3321 22358999987554 47899999999999999999999986433211 1111111 110000
Q ss_pred --ccc-----c------CCcccccc-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 --KDI-----V------DPTLKSFQ-----ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 --~~~-----~------d~~l~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... . +....... ......+.+++.+||..||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000 0 00000000 011345678999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=281.77 Aligned_cols=242 Identities=21% Similarity=0.255 Sum_probs=187.7
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||.||+++... +..+++|..+.....+.......++..|+.++++++||||+++++++.+.+ ..++|
T Consensus 3 ~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (260)
T cd08222 3 ILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD--AFCII 80 (260)
T ss_pred eeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC--ceEEE
Confidence 456778899999999998653 344555554432222222233456778999999999999999999988766 57999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
|||+++++|.+++... ....+++..+..++.|++.|++|||+.+ ++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec-CCEeecccCceeecCC
Confidence 9999999999988642 3456899999999999999999999988 999999999999976 469999999875432
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.+...|++||......++.++||||||+++|||++|..||.. ....+.......+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~----------~~~ 225 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG--QNFLSVVLRIVEGPT----------PSL 225 (260)
T ss_pred CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHcCCC----------CCC
Confidence 234468899998888889999999999999999999999853 233333333322211 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...+.++.+++.+||..+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 3455678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=280.42 Aligned_cols=226 Identities=15% Similarity=0.229 Sum_probs=176.3
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEEecc
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYS 563 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~Ey~ 563 (772)
+|+|+||.||+++.+ ++..+++|......... . |+.....+ +||||+++++++...+ ..++||||+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~--e~~~~~~~~~h~~iv~~~~~~~~~~--~~~iv~e~~ 91 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------I--EPMVHQLMKDNPNFIKLYYSVTTLK--GHVLIMDYI 91 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------h--hHHHHHHhhcCCCEEEEEEEEecCC--eeEEEEEcC
Confidence 499999999999964 56778888775432111 1 22222212 7999999999998877 679999999
Q ss_pred CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC-----C
Q 004124 564 PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT-----A 637 (772)
Q Consensus 564 ~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~~-----~ 637 (772)
++|+|.+++... ..++|..+..++.|+++||+|||+.+ ++||||||+||+++.++ .++|+|||+++... .
T Consensus 92 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 167 (267)
T PHA03390 92 KDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD 167 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCC
Confidence 999999998643 37899999999999999999999988 99999999999999988 99999999876432 2
Q ss_pred CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC---HHHHHHHHhhcCCCCccccCCccccccHHHHH
Q 004124 638 AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS---LENWASEYLKGEQPLKDIVDPTLKSFQENVLE 714 (772)
Q Consensus 638 ~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 714 (772)
+...|+|||.+.+..++.++|||||||++|||+||+.||...... ...+.... .. . .......+.
T Consensus 168 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~--~---------~~~~~~~~~ 235 (267)
T PHA03390 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK--K---------LPFIKNVSK 235 (267)
T ss_pred CCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc--c---------CCcccccCH
Confidence 455789999998889999999999999999999999999743322 12222111 10 0 011224557
Q ss_pred HHHHHHHHcccCCCCCCCC-HHHHHH
Q 004124 715 ELLVVIKNCVHPDPKQRPS-MRGIAA 739 (772)
Q Consensus 715 ~l~~Li~~Cl~~dP~~RPs-~~evl~ 739 (772)
.+.+++.+||+.+|.+||+ ++|+++
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 236 NANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHHHhccChhhCCchHHHHhc
Confidence 7899999999999999996 688874
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-31 Score=274.56 Aligned_cols=238 Identities=23% Similarity=0.368 Sum_probs=192.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|.|++|.||+|+.. +++.+++|........ ......+.+|++++++++|+|++++++++.+.+ ..++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v 77 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--SLYII 77 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC---HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--EEEEE
Confidence 45677889999999999865 5778999988755322 234567999999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++++|.+++.. ...+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 78 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 78 LEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred EecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999999853 356899999999999999999999988 99999999999999999999999998764322
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
+...|++||...+..++.++||||+|+++|||++|+.||..... .... ........ ...+.
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-~~~~-~~~~~~~~----------~~~~~ 221 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-MAAL-FRIVQDDH----------PPLPE 221 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-HHHH-HHHhccCC----------CCCCC
Confidence 34468999998877789999999999999999999999864332 1111 11111110 11223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++.+++.+||..+|++||++.|++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 34567889999999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=296.52 Aligned_cols=241 Identities=22% Similarity=0.346 Sum_probs=195.4
Q ss_pred cccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.++.+++.+|+|.|+.|..|+. .++..||+|.+.+.... ......+.+|+++|..++|||||+++.+..... ..
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln---~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~--~l 130 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN---PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA--TL 130 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccC---hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc--ee
Confidence 3457889999999999999985 47899999988755432 223345899999999999999999999999877 78
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
|+||||+.+|.+++|+... ..+.......+..|+.+|++|||++. |||||||++|||||.++++||+|||++...
T Consensus 131 ylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999999633 34555778889999999999999998 999999999999999999999999987643
Q ss_pred -------CCCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 -------TAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..+...|+|||++.+..|+ +++|+||+||+||-|+.|..||++. ++.+.-.+++.+...
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~--~lk~Lr~rvl~gk~r----------- 273 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ--NLKELRPRVLRGKYR----------- 273 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc--ccccccchheeeeec-----------
Confidence 3456789999999888875 8999999999999999999999633 222222222222111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+--...+..+++++.+..+|.+|++++++.+.
T Consensus 274 Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 274 IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 122234567789999999999999999999865
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=292.40 Aligned_cols=250 Identities=18% Similarity=0.253 Sum_probs=185.7
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhh---------hHHHHHHHHHHHHhcCCCCcccceeEEEEcC
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSK---------NLESQFRKKIDTLSKVNHKNFVNLIGYCEED 551 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~---------~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~ 551 (772)
+.+.+|.|+||+||+|+.. +++.+|+|++.......... .....+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 3356889999999999954 68899999876443221000 0112578999999999999999999999877
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGl 631 (772)
+ ..++||||++ |+|.+++. ....+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 93 ~--~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 93 D--FINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred C--cEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCCCCEEECCccc
Confidence 6 6799999996 69998885 3345889999999999999999999988 99999999999999999999999998
Q ss_pred ccCCC-----------------------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHH-
Q 004124 632 WNNTT-----------------------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENW- 686 (772)
Q Consensus 632 a~~~~-----------------------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~- 686 (772)
++... .+...|+|||.+.+. .++.++|||||||++|||+||+.||...+. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~ 244 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE-IDQLG 244 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHH
Confidence 75433 123358899988653 478999999999999999999999964432 1111
Q ss_pred -HHHHhhcCCC--Cc------------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 687 -ASEYLKGEQP--LK------------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 687 -~~~~~~~~~~--~~------------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+......... .. ....+...........++.+++.+||+.+|++||++.|++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1111110000 00 00001111111233567889999999999999999999986
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=282.27 Aligned_cols=247 Identities=21% Similarity=0.269 Sum_probs=188.5
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+.+.+|+|.||.||+|+.. +++.+++|.+...... ....+.+..|++++++++|+||+++++++.+.+ ..++||
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~ 77 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE---EGIPSTALREISLLKELKHPNIVKLLDVIHTER--KLYLVF 77 (282)
T ss_pred eehcccccCcceEEEeeecCCCcEEEEEEecccccc---ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--ceEEEe
Confidence 4567889999999999965 5889999988755311 223456789999999999999999999998776 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||++ ++|.+++.... ..+++..+..++.++++||+|||+.+ |+||||+|+||++++++.+||+|||+++....
T Consensus 78 e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 78 EYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 9997 59999986432 46899999999999999999999988 99999999999999999999999998764322
Q ss_pred ------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC----------------
Q 004124 638 ------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE---------------- 694 (772)
Q Consensus 638 ------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~---------------- 694 (772)
....|+|||.+... .++.++|||||||++||+++|+.||..... .+.........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 13358899998666 889999999999999999999999864321 11111111100
Q ss_pred --CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 695 --QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 695 --~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...............+....++.+++.+||..+|++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000000111223567999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=290.88 Aligned_cols=258 Identities=17% Similarity=0.210 Sum_probs=190.0
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
++...+++| ++++.+|+|+||.||+|.. .++..||+|++..... .....+.+.+|++++.+++||||+++++++.
T Consensus 11 ~~~~~~~~y-~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 11 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHhhccCce-EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch---hhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 444455554 6778899999999999985 5688899998764321 1223456889999999999999999999886
Q ss_pred cCCC----ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004124 550 EDEP----FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 550 ~~~~----~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
.... ...++++|++ +++|.+++. ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+|
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCCCCEE
Confidence 4321 1357888887 789988774 235899999999999999999999988 99999999999999999999
Q ss_pred EccccCccCCCC------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CC
Q 004124 626 ISDFSFWNNTTA------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PL 697 (772)
Q Consensus 626 LsDFGla~~~~~------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~ 697 (772)
|+|||+++.... ++..|+|||...+ ..++.++|||||||++|||++|+.||...+. ............ +.
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~ 238 (345)
T cd07877 161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPG 238 (345)
T ss_pred EecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCC
Confidence 999999765432 2446889998755 5688999999999999999999999954321 111111111100 00
Q ss_pred cccc----C---------------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 KDIV----D---------------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ~~~~----d---------------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+. + ............++.+++.+|++.||++||++.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 0 00000001134578899999999999999999999865
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=275.39 Aligned_cols=230 Identities=25% Similarity=0.337 Sum_probs=186.3
Q ss_pred cCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|.|+||.||+++.. +++.+++|.+....... ......+..|++++++++||||+++++.+..++ ..++||||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIK--RKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--KLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcc--hHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--eeEEEEecCC
Confidence 578999999999975 57889999876543221 224567899999999999999999999988766 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-------- 636 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-------- 636 (772)
+++|.+++.. ...+++.....++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++....
T Consensus 77 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (250)
T cd05123 77 GGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152 (250)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccC
Confidence 9999999853 346899999999999999999999988 9999999999999999999999999875432
Q ss_pred -CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHH
Q 004124 637 -AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEE 715 (772)
Q Consensus 637 -~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 715 (772)
.+...|++||...+...+.++||||||+++||+++|+.||...+ ..+........... .+.....+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~ 219 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED--RKEIYEKILKDPLR-----------FPEFLSPE 219 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHhcCCCC-----------CCCCCCHH
Confidence 23457899999988888999999999999999999999996433 23333333222111 12223567
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 004124 716 LLVVIKNCVHPDPKQRPSMRG 736 (772)
Q Consensus 716 l~~Li~~Cl~~dP~~RPs~~e 736 (772)
+.+++.+||..||++||++.+
T Consensus 220 l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHhcCCHhhCCCccc
Confidence 889999999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-32 Score=268.67 Aligned_cols=261 Identities=19% Similarity=0.316 Sum_probs=194.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.++.+|.|+.|.|++++.. +|..+|||.+..... ....+++...+.++.+- +.|.||+.+|||..+. ..++
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N----kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~--dV~I 168 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT--DVFI 168 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCC----HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc--hHHH
Confidence 45788999999999999965 578899998865432 33456788888877766 4899999999998766 4678
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN--- 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~--- 634 (772)
.||.|. -.+..+++ .-.+++++...-++...+.+||.||.+ ++ |+|||+||+|||+|+.|++|++|||++-.
T Consensus 169 cMelMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 169 CMELMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeecccccceeec
Confidence 899984 24444443 344568888888899999999999965 45 99999999999999999999999998643
Q ss_pred -----CCCCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 635 -----TTAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 -----~~~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++-..|||||.+. ...|+.++|||||||+|+||+||+.||...+.+.. .+..++..+.+ .+++.
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-~ltkvln~ePP---~L~~~-- 318 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-VLTKVLNEEPP---LLPGH-- 318 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-HHHHHHhcCCC---CCCcc--
Confidence 344566899999874 45799999999999999999999999976555443 33344443222 12211
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
..++..+.+++..|+++|+.+||...++++. .....+.. .....+.|+.++
T Consensus 319 ---~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h--~Fi~~ye~--a~~dVa~WF~dV 369 (391)
T KOG0983|consen 319 ---MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH--PFIKRYET--AEVDVASWFKDV 369 (391)
T ss_pred ---cCcCHHHHHHHHHHhhcCcccCcchHHHhcC--cceeecch--hhccHHHHHHHH
Confidence 2266788899999999999999999998863 11111111 113446777776
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=286.22 Aligned_cols=250 Identities=21% Similarity=0.229 Sum_probs=184.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~------ 553 (772)
++++.+|.|+||.||+|+.. ++..+++|++......+ .....+.+|++++++++||||+++++++.....
T Consensus 11 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 11 EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD---GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC---CcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 67788999999999999965 67889999886543322 112457789999999999999999998765331
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...++|+||+.+ +|...+.. ....+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECcCccch
Confidence 146999999964 67776643 3456899999999999999999999988 9999999999999999999999999876
Q ss_pred CCCC--------------------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004124 634 NTTA--------------------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 634 ~~~~--------------------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
.... +...|+|||.+.+ ..++.++|||||||++|||++|+.||..... .........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~--~~~~~~~~~ 241 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD--IDQLHLIFK 241 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 4321 1234889998754 4588999999999999999999999863322 121111111
Q ss_pred cCCC-----------Ccccc--------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 693 GEQP-----------LKDIV--------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 693 ~~~~-----------~~~~~--------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.... ..... .+..........+++.+++.+|++.||++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000 00000 00000001123357889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=280.93 Aligned_cols=238 Identities=23% Similarity=0.319 Sum_probs=191.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
++.+.+|.|+||.||+|+.. ++..+++|.+...... .....+.+.+|++++.+++ ||||+++++++...+ ..++
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~l 79 (280)
T cd05581 4 KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI--KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE--NLYF 79 (280)
T ss_pred eEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc--chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc--eEEE
Confidence 56678899999999999965 6888999987653221 1233467889999999998 999999999988776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||+++++|.+++.. ...+++..+..|+.|++.||+|||+.+ ++|+||||+||+++.++.++++|||++.....
T Consensus 80 v~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 80 VLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999999853 346999999999999999999999988 99999999999999999999999998653221
Q ss_pred ----------------------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHH
Q 004124 638 ----------------------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689 (772)
Q Consensus 638 ----------------------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~ 689 (772)
+...|++||......++.++||||||++++|+++|+.||.... .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~ 233 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--EYLTFQK 233 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHH
Confidence 2346789999888889999999999999999999999996433 1122222
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM----RGIAA 739 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~----~evl~ 739 (772)
...... ..+...++++.+++.+||+.+|++||++ +|+++
T Consensus 234 ~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 ILKLEY-----------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHhcCC-----------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 221111 1222335678899999999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-33 Score=274.61 Aligned_cols=242 Identities=21% Similarity=0.283 Sum_probs=188.3
Q ss_pred ccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEEE
Q 004124 483 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+|.+|.|+||+|+|-.+ +.|+.+|||++..... +...++++.|.++..+- +.||||++||.+...+ ..++-|
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~----~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--dcWiCM 142 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI----EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--DCWICM 142 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc----hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--ceeeeH
Confidence 57889999999999985 4789999999976543 33457889998865555 7899999999877665 579999
Q ss_pred eccCCCChhhhhh---hhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCc----
Q 004124 561 EYSPNGSLFEHLH---IQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW---- 632 (772)
Q Consensus 561 Ey~~~GsL~~~L~---~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla---- 632 (772)
|.|. -+|..+.+ ......+++...-+|..-...||.||.+ .. |||||+||+|||+|..|.+||+|||++
T Consensus 143 ELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 143 ELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHH
Confidence 9994 46655432 2244567888888899999999999964 55 999999999999999999999999974
Q ss_pred ----cCCCCCCccccchhhhc--cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 633 ----NNTTAAKTGSAAMELLE--TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 633 ----~~~~~~~~~~~aPE~~~--~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
+....+-..|||||.+. ...|+.+|||||+||+|||+.||+.||..-+. ..+.+..++.+..+.. ....
T Consensus 220 ~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql~~Vv~gdpp~l---~~~~- 294 (361)
T KOG1006|consen 220 DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQLCQVVIGDPPIL---LFDK- 294 (361)
T ss_pred HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHHHHHHHcCCCCee---cCcc-
Confidence 45566778899999884 34599999999999999999999999964332 4444555555543321 1110
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..-+....+..++..|+.+|-.+||...++.+
T Consensus 295 -~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 295 -ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 11235678899999999999999999998865
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=287.96 Aligned_cols=259 Identities=19% Similarity=0.224 Sum_probs=192.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|.. .++..||||++..... .....+.+.+|++++++++||||+++++++..... .
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 46788999999999999985 4788999998754321 12334568899999999999999999998875432 1
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+ +++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred eEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 358999999 778988874 246899999999999999999999988 99999999999999999999999998865
Q ss_pred CCC------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC----------
Q 004124 635 TTA------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL---------- 697 (772)
Q Consensus 635 ~~~------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~---------- 697 (772)
... +...|++||.+.. ..++.++||||+||++||+++|+.||..... ..............
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd07880 168 TDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH--LDQLMEIMKVTGTPSKEFVQKLQS 245 (343)
T ss_pred cccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHhhcc
Confidence 432 2446789998865 4588999999999999999999999964321 12222211111000
Q ss_pred ----------ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhhcCC
Q 004124 698 ----------KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA--KLKEITAMEP 749 (772)
Q Consensus 698 ----------~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~--~L~~i~~~~~ 749 (772)
.......+....+....++.+++.+|++.||++|||+.+++. .++.......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~ 309 (343)
T cd07880 246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED 309 (343)
T ss_pred hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence 000000111111234557889999999999999999999984 3555544433
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-33 Score=321.56 Aligned_cols=236 Identities=21% Similarity=0.288 Sum_probs=189.9
Q ss_pred cccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
-.+|.|.||.||-|. .++|.-.|+|-++..... ....+...+|+.++..++|||+|++||+-.+.+ ..+|.|||
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv~IFMEy 1315 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KVYIFMEY 1315 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc---cccCcchHHHHHHHHhccCccccccCceeecHH--HHHHHHHH
Confidence 357899999999998 667888899887654432 333456889999999999999999999998877 67899999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-------
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT------- 635 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~------- 635 (772)
|++|+|.+.+. .++..++.....+..|++.|++|||+++ ||||||||+||+||.+|.+|++|||.|...
T Consensus 1316 C~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1316 CEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred hccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 99999999984 3445666667778899999999999999 999999999999999999999999987533
Q ss_pred ------CCCCccccchhhhccC---CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 ------TAAKTGSAAMELLETS---AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~---~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..|+..|||||++.+. .-..+.||||+|||++||+||++||..-+.+.. .+..+-.+. .+
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a-IMy~V~~gh----------~P 1460 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA-IMYHVAAGH----------KP 1460 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-HHhHHhccC----------CC
Confidence 2356789999998543 345789999999999999999999964333221 122222222 22
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+++..+.+-.+++..|+..||++|-++.|+++
T Consensus 1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 355667888899999999999999988887765
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=287.14 Aligned_cols=238 Identities=21% Similarity=0.294 Sum_probs=194.3
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
..-..+|+|+||.||-++. .+|+.+|.|++.++.... ...+.....|-.+|.+++.+.||.+--.|...+ ..++|
T Consensus 188 ~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk--r~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd--~LClV 263 (591)
T KOG0986|consen 188 RVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK--RKGETMALNEKQILEKVSSPFIVSLAYAFETKD--ALCLV 263 (591)
T ss_pred eeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHH--hhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC--ceEEE
Confidence 4456677899999999985 468888988876654432 333456788999999999999999988888777 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
+..|.||||.-+|.......++...++.++.+|+.||++||... ||.||+||+|||||+.|+++|+|.|+|...
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 99999999988887656678999999999999999999999988 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++.+|||||++..+.|+...|.||+||++|||+.|+.||....... .+.-+..... -..++
T Consensus 342 ~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-----------~~ey~ 410 (591)
T KOG0986|consen 342 PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-----------PEEYS 410 (591)
T ss_pred ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-----------hhhcc
Confidence 256789999999999999999999999999999999999996432211 1111111111 12355
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
+..+++..++....+++||++|...+
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCC
Confidence 67788999999999999999997655
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=288.51 Aligned_cols=257 Identities=18% Similarity=0.216 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC---CceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~---~~~~ 556 (772)
++.+.+|.|+||.||+|+.. ++..+++|++..... .....+.+.+|+++++.++|+||+++++++...+ ....
T Consensus 3 ~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 3 ELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD---DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc---cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 46678899999999999965 488999998865431 1233467899999999999999999999987653 1246
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||++ ++|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.++|+|||++....
T Consensus 80 ~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 80 YIVTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEEecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 99999997 589888853 347899999999999999999999988 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCccc--
Q 004124 637 A------------AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDI-- 700 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~-- 700 (772)
. ++..|+|||.+.+. .++.++||||||+++|||++|+.||...+ ..+......... .+..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD--YIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHhcCCCChhHhh
Confidence 2 23357899998777 88999999999999999999999996433 122222211110 000000
Q ss_pred --cCC---------------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 701 --VDP---------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 701 --~d~---------------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
... .........+.++.+++.+||+.+|++||++.++++. ++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 000 0001112345678999999999999999999999985 6665553
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=288.26 Aligned_cols=245 Identities=18% Similarity=0.223 Sum_probs=183.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~------ 553 (772)
++++.+|.|+||.||+|+.. ++..|++|++..+.. ...+.+.+|++++++++||||+++++++.....
T Consensus 8 ~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 8 MDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred EEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 66788899999999999864 678999998865442 224568899999999999999999987665321
Q ss_pred ------ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEE
Q 004124 554 ------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKI 626 (772)
Q Consensus 554 ------~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL 626 (772)
...++||||++ ++|.+++. ...+++.....++.|++.||+|||+.+ |+||||||+||+++ +++.+|+
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCceEEE
Confidence 14689999997 58888774 245889999999999999999999988 99999999999997 4567899
Q ss_pred ccccCccCCC------------CCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc
Q 004124 627 SDFSFWNNTT------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 627 sDFGla~~~~------------~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~ 693 (772)
+|||+++... .+...|+|||.+. ...++.++|||||||++|||++|+.||..... .+........
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~~~~~ 234 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE--LEQMQLILES 234 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHh
Confidence 9999875321 1234689999764 35688999999999999999999999964321 1111111111
Q ss_pred CCCCc-------------c-------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 694 EQPLK-------------D-------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 694 ~~~~~-------------~-------~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. +.. . ..........+....++.+++.+||+.||++|||+.|++.
T Consensus 235 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 V-PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred c-CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0 000 0 0000001111234567889999999999999999999985
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=294.55 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=189.9
Q ss_pred cccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC----CceEEE
Q 004124 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PFTRMM 558 (772)
Q Consensus 484 g~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~----~~~~~L 558 (772)
+.+|+|+||.||+|+ -.+|+.||||.++... .....+...+|+++|++++|+|||+++++-.+.. .....+
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~----~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKES----SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhc----ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 467889999999999 5689999999887543 1234567889999999999999999999876554 335789
Q ss_pred EEeccCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCC--cEEEccccCcc
Q 004124 559 VFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDY--AAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~--~~kLsDFGla~ 633 (772)
|||||.+|||+..|... ....|+....+.+..+++.||.|||+++ |+||||||.||++- ++| .-||+|||.|+
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999999754 3457999999999999999999999998 99999999999993 333 46999999998
Q ss_pred CCCC--------CCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC--HHHHHHHHhhcCCC-Ccccc
Q 004124 634 NTTA--------AKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQP-LKDIV 701 (772)
Q Consensus 634 ~~~~--------~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~--~~~~~~~~~~~~~~-~~~~~ 701 (772)
.... |+..|.+||.++ .+.|+..+|.|||||++||.+||..||....+. ..+.+......... ..-..
T Consensus 173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~ 252 (732)
T KOG4250|consen 173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGA 252 (732)
T ss_pred cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEee
Confidence 7654 456788999998 588999999999999999999999999754332 22222222222111 10000
Q ss_pred CCc----------cc---cccHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHHhhhh
Q 004124 702 DPT----------LK---SFQENVLEELLVVIKNCVHPDPKQRP--SMRGIAAKLKEITA 746 (772)
Q Consensus 702 d~~----------l~---~~~~~~~~~l~~Li~~Cl~~dP~~RP--s~~evl~~L~~i~~ 746 (772)
++. ++ .........+-..+..++..+|++|- .+.+....+.+|..
T Consensus 253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 100 01 11122233445556666777788887 66666666666544
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=283.77 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=186.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++..+|.|+||.||+|+.. ++..+++|++...... ....+.+.+|++++.+++||||+++++++...+. ..++
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~l 87 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST---PVLAKRTYRELKLLKHLRHENIISLSDIFISPLE-DIYF 87 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc---cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC-cEEE
Confidence 467788999999999999854 7889999987543211 2234668899999999999999999998876432 5789
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+||+ +++|.+++. ...+++.....++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 88 v~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 88 VTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred Eeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 99999 568988874 235788888899999999999999988 99999999999999999999999998764322
Q ss_pred -----CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-------------HHHHHHHHhhcCC-CC
Q 004124 638 -----AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGS-------------LENWASEYLKGEQ-PL 697 (772)
Q Consensus 638 -----~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-------------~~~~~~~~~~~~~-~~ 697 (772)
+...|++||.+.+ ..++.++|||||||++|||+||+.||...... ..++......+.. .+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 2346899998755 56899999999999999999999999643210 0111111000000 00
Q ss_pred -ccccCC---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 -KDIVDP---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 -~~~~d~---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...... ......+...+++.++|.+||+.+|++||++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000111235688999999999999999999999865
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=287.97 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=187.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~ 555 (772)
++++.+|.|+||.||+|+.. ++..+++|++..... .....+.+.+|+.++++++||||+++++++...+. ..
T Consensus 18 ~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 18 QNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ---SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred EEEEEeccCCceEEEEEEECCCCcEEEEEecccccc---hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 67788999999999999975 578899998754221 12234567889999999999999999997765442 23
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 95 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEccccccccc
Confidence 79999999 6799888752 46899999999999999999999988 999999999999999999999999988654
Q ss_pred CC------CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CCcccc------
Q 004124 636 TA------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKDIV------ 701 (772)
Q Consensus 636 ~~------~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~------ 701 (772)
.. +...|+|||.... ..++.++|||||||++||++||+.||..... .+.......... +.....
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHhhccch
Confidence 32 2345889998754 4678999999999999999999999964322 222222211100 000000
Q ss_pred -------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 702 -------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 -------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+.........+.++.+++.+||+.+|++|||+.||++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000001111235788999999999999999999999763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=306.33 Aligned_cols=145 Identities=24% Similarity=0.340 Sum_probs=126.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++.+|.|+||+||+|+.. +++.||+|++...... .......+.+|+.++..++||||+++++++...+ ..++|
T Consensus 7 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~--~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lV 82 (669)
T cd05610 7 VIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI--NKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN--NVYLV 82 (669)
T ss_pred EEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc--CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC--EEEEE
Confidence 67788999999999999976 6889999988654322 1334567899999999999999999999988776 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
|||+++|+|.++++. ...+++...+.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999853 345888999999999999999999988 9999999999999999999999999753
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=305.24 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=181.9
Q ss_pred HHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC
Q 004124 473 EAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED 551 (772)
Q Consensus 473 ~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~ 551 (772)
.+...+| +.+..+|+|+||.|||++.+ +|+.+|||++..+. +......+.+|+++|++|+|||||++|..+.+.
T Consensus 475 SRY~~DF-EEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs 549 (1351)
T KOG1035|consen 475 SRYLNDF-EELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSAWVES 549 (1351)
T ss_pred hhHhhhh-HHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence 4566777 55678899999999999965 89999999998764 233456788999999999999999998643211
Q ss_pred CC------------------------------------------------------------------------------
Q 004124 552 EP------------------------------------------------------------------------------ 553 (772)
Q Consensus 552 ~~------------------------------------------------------------------------------ 553 (772)
..
T Consensus 550 ~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~ 629 (1351)
T KOG1035|consen 550 TAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRN 629 (1351)
T ss_pred CCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccc
Confidence 00
Q ss_pred ---------------------------------------ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHH
Q 004124 554 ---------------------------------------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594 (772)
Q Consensus 554 ---------------------------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~ 594 (772)
...||-||||+.-.|.++++.+.... .-....+++.+|+.
T Consensus 630 ~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlE 708 (1351)
T KOG1035|consen 630 LSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILE 708 (1351)
T ss_pred cccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHH
Confidence 12467788888877777765432211 24456789999999
Q ss_pred HHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---------------------------CCCCccccchhh
Q 004124 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---------------------------TAAKTGSAAMEL 647 (772)
Q Consensus 595 gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---------------------------~~~~~~~~aPE~ 647 (772)
||+|+|+.+ ||||||||.||+||++..+||+|||+++.. ..|+.-|+|||+
T Consensus 709 GLaYIH~~g--iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 709 GLAYIHDQG--IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHHhCc--eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 999999999 999999999999999999999999997641 123446899999
Q ss_pred hccC---CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcc
Q 004124 648 LETS---AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 724 (772)
Q Consensus 648 ~~~~---~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl 724 (772)
+.+. .|+.|+|+||+|||++||+. ||... +.-...+.....+.-|.. .++..+...+-..+|++++
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-MERa~iL~~LR~g~iP~~-------~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-MERASILTNLRKGSIPEP-------ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCch-HHHHHHHHhcccCCCCCC-------cccccccchHHHHHHHHHh
Confidence 8544 59999999999999999996 56321 111112222211211111 1223344455677999999
Q ss_pred cCCCCCCCCHHHHHH
Q 004124 725 HPDPKQRPSMRGIAA 739 (772)
Q Consensus 725 ~~dP~~RPs~~evl~ 739 (772)
+.||.+|||+.|++.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999986
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=270.82 Aligned_cols=215 Identities=20% Similarity=0.260 Sum_probs=170.4
Q ss_pred cceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccCCCC
Q 004124 489 GTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGS 567 (772)
Q Consensus 489 G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~Gs 567 (772)
|.||.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----------EYSRERLTIIPHCVPNMVCLHKYIVSED--SVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----------hhhhHHHHHHhcCCCceeehhhheecCC--eEEEEEecCCCCC
Confidence 78899999996 467889999875432 2334555556667999999999998776 6799999999999
Q ss_pred hhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC------CCcc
Q 004124 568 LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA------AKTG 641 (772)
Q Consensus 568 L~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~------~~~~ 641 (772)
|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+..... ....
T Consensus 72 L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 147 (237)
T cd05576 72 LWSHISK--FLNIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM 147 (237)
T ss_pred HHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCcc
Confidence 9999853 345899999999999999999999988 99999999999999999999999997653322 2345
Q ss_pred ccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHH
Q 004124 642 SAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIK 721 (772)
Q Consensus 642 ~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~ 721 (772)
|+|||......++.++||||+||++|||++|+.|+....... .. ... ...+.....++.+++.
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------~~------~~~---~~~~~~~~~~~~~li~ 210 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------NT------HTT---LNIPEWVSEEARSLLQ 210 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--------cc------ccc---cCCcccCCHHHHHHHH
Confidence 899999888889999999999999999999998874221100 00 000 0122334567889999
Q ss_pred HcccCCCCCCCCHHH
Q 004124 722 NCVHPDPKQRPSMRG 736 (772)
Q Consensus 722 ~Cl~~dP~~RPs~~e 736 (772)
+|++.||++||++.+
T Consensus 211 ~~l~~dp~~R~~~~~ 225 (237)
T cd05576 211 QLLQFNPTERLGAGV 225 (237)
T ss_pred HHccCCHHHhcCCCc
Confidence 999999999999743
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=279.91 Aligned_cols=250 Identities=18% Similarity=0.197 Sum_probs=182.8
Q ss_pred ccccccCccceEEEEEEEEc-C--CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC--CCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-S--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED--EPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~--~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~--~~~ 554 (772)
++.+.+|+|+||.||+++.. . +..+|+|++...... ....+.+.+|++++.++ +||||+++++++... ...
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 3 ELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK---KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred eEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 45677889999999999965 3 678999987532211 22345688999999999 599999999976432 222
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++++||+. ++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 80 ~~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 80 ELYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred cEEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 4688899986 68988884 3456899999999999999999999988 99999999999999999999999998763
Q ss_pred CC-------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCc-
Q 004124 635 TT-------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLK- 698 (772)
Q Consensus 635 ~~-------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~- 698 (772)
.. .++..|+|||...+ ..++.++|||||||++|||++|+.||...+. .......+... .+..
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY--VDQLNQILQVLGTPDEE 232 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HHHHHHHHHHhCCCCHH
Confidence 22 23446899998755 5689999999999999999999999864321 11111111100 0000
Q ss_pred ---cccC---------------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 699 ---DIVD---------------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 699 ---~~~d---------------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+.+ ..+....+....++.+++.+|++.||++|||+.|++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 00001111234678899999999999999999998753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=262.94 Aligned_cols=238 Identities=18% Similarity=0.306 Sum_probs=186.5
Q ss_pred cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC--CCceEEEE
Q 004124 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED--EPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~--~~~~~~LV 559 (772)
..+|-|-.|.|-.+..+ +++.+|+|++... .+.++|++..-.. .|||||.++++|... +.-...+|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS----------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC----------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 45667888899999854 6778888876421 3466888875555 699999999998753 22256899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCCC
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTT 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~~~~ 636 (772)
||.|+||.|++.+..+..+.+++.++-.|+.||+.|+.|||+.+ |.||||||+|+|.. .+-.+||+|||+|+...
T Consensus 138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecccccccccC
Confidence 99999999999998777788999999999999999999999999 99999999999995 45679999999998655
Q ss_pred C--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CH-HHHHHHHhhcCCCCccccCCccc
Q 004124 637 A--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SL-ENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 ~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~-~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
. .+++|.|||++...+|+..+|+||+||++|-|+.|..||....+ .+ .....++..+... .-+++
T Consensus 216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~---FP~pE-- 290 (400)
T KOG0604|consen 216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYE---FPEPE-- 290 (400)
T ss_pred CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCcc---CCChh--
Confidence 2 35678999999999999999999999999999999999974322 11 1111222222111 11111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
-..++++..++|+..|..+|.+|.|+.|++..
T Consensus 291 --Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 291 --WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred --HhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 13567889999999999999999999999864
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=263.82 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=184.7
Q ss_pred cccccccCccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++|.+|+|+||.||||+-.+ .+.+|+|+++...... .......+|+.+++.++|||||.+..++...+.
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t---GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~- 101 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT---GISMSACREIALLRELKHPNVISLVKVFLSHDK- 101 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC---CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc-
Confidence 3889999999999999996432 2368888876543221 122456799999999999999999998877432
Q ss_pred eEEEEEeccCCCChhhhhhhh---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC----CcEEEc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED----YAAKIS 627 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~---~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~----~~~kLs 627 (772)
..+|++||.+. +|.+.++-. ....++......|..||..|+.|||+.- |+||||||.|||+..+ |.+||+
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEee
Confidence 68999999987 888888643 2357888899999999999999999988 9999999999999766 999999
Q ss_pred cccCccCCCCC------------Cccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-------HHHH
Q 004124 628 DFSFWNNTTAA------------KTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL-------ENWA 687 (772)
Q Consensus 628 DFGla~~~~~~------------~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-------~~~~ 687 (772)
|||+++..... +--|.|||.+.+ .-||.+.||||.|||..||+|-++-|......+ .+.+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99998753321 225789998765 569999999999999999999887775332111 1112
Q ss_pred HHHhhcCCCCccccCCccccccH--------------H------------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQE--------------N------------VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~--------------~------------~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+++.--....+-..|.+..+++ + -.+..++|+.++++.||.+|.|+.+.++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 22221100000111111111111 0 01237789999999999999999998874
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=284.78 Aligned_cols=229 Identities=20% Similarity=0.304 Sum_probs=183.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++...+|.|+|+.|-++.. .+++..+||++.... .+-.+|+.++... +||||+++.+.+.++. +.++
T Consensus 325 ~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~--~~~~ 393 (612)
T KOG0603|consen 325 EFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---------DDNQDEIPISLLVRDHPNIVKSHDVYEDGK--EIYL 393 (612)
T ss_pred ccccccCCCCccceeeeeccccccchhheeccccc---------cccccccchhhhhcCCCcceeecceecCCc--eeee
Confidence 3445688999999999984 467888999886542 1234566666655 7999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-CCCCcEEEccccCccCCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL-TEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl-d~~~~~kLsDFGla~~~~~ 637 (772)
|||++.+|-+.+.+.... ... ..+.+|+.+|+.|+.|||+++ +|||||||+|||+ +..++++|+|||.++....
T Consensus 394 v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999998887765322 223 667789999999999999988 9999999999999 5889999999999876554
Q ss_pred C------CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 638 A------KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 638 ~------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
. +..|.|||+.....|++++|+||||++||||++|+.||...... .+....+..+ .+.+.
T Consensus 469 ~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~-------------~~s~~ 534 (612)
T KOG0603|consen 469 SCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQMP-------------KFSEC 534 (612)
T ss_pred hhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhcCC-------------ccccc
Confidence 3 34688999999999999999999999999999999999755443 2222221111 12256
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
++++..+|+..||+.||.+||+|.++..
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 7789999999999999999999999875
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=261.07 Aligned_cols=241 Identities=21% Similarity=0.300 Sum_probs=192.1
Q ss_pred hcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++| +.++.+|+|.||.|-.++- .+++.+|+|++++..... +.....-..|-++|...+||.+..+.-.++..+ .
T Consensus 168 ~dF-dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia--kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d--r 242 (516)
T KOG0690|consen 168 EDF-DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA--KDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD--R 242 (516)
T ss_pred chh-hHHHHhcCCccceEEEEeecccCceeehhhhhhhheee--hHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc--e
Confidence 344 4567788999999999984 478889999886543322 233345677889999999999999987777776 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN- 634 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~- 634 (772)
.|.||||+.+|.|+-+|. +.+.++......+...|..||.|||+.+ ||.||||.+|.|||++|++||+|||+++.
T Consensus 243 lCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccCCceEeeecccchhc
Confidence 899999999999998884 4566888888889999999999999988 99999999999999999999999999863
Q ss_pred --------CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 635 --------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 --------~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
...+++.|.|||++....|+.+.|.|.+|||+|||+.|+.||...+ -.....-++.++-
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d--h~kLFeLIl~ed~----------- 385 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD--HEKLFELILMEDL----------- 385 (516)
T ss_pred ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc--hhHHHHHHHhhhc-----------
Confidence 3456778999999999999999999999999999999999996432 2222222222221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.++....++...|+...+.+||.+|. .+.||.+
T Consensus 386 kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 386 KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 23445567788899999999999994 3555543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=256.16 Aligned_cols=231 Identities=24% Similarity=0.340 Sum_probs=184.8
Q ss_pred ceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccCCCCh
Q 004124 490 TVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSL 568 (772)
Q Consensus 490 ~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL 568 (772)
+||.||+|+.. ++..+++|+......... .+.+.+|++.+++++|+||+++++++.... ..++++||+++++|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK----RERILREISILKKLKHPNIVRLYDVFEDED--KLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH----HHHHHHHHHHHHhCCCCcHHHHHhheeeCC--EEEEEEeCCCCCCH
Confidence 47899999976 488999998865443221 468999999999999999999999998766 67999999999999
Q ss_pred hhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--------CCc
Q 004124 569 FEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--------AKT 640 (772)
Q Consensus 569 ~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--------~~~ 640 (772)
.+++.... .+++..+..++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+..... +..
T Consensus 75 ~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 150 (244)
T smart00220 75 FDLLKKRG--RLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTP 150 (244)
T ss_pred HHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCc
Confidence 99985432 3899999999999999999999987 99999999999999999999999998764332 345
Q ss_pred cccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHH
Q 004124 641 GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVI 720 (772)
Q Consensus 641 ~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li 720 (772)
.|++||......++.++||||||+++||+++|+.||... .+................ ........++.+++
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i 221 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-DQLLELFKKIGKPKPPFP--------PPEWKISPEAKDLI 221 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHhccCCCCc--------cccccCCHHHHHHH
Confidence 788999998888999999999999999999999999642 222222222221111100 00001446788999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 004124 721 KNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 721 ~~Cl~~dP~~RPs~~evl~ 739 (772)
.+||..+|++||++.++++
T Consensus 222 ~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 222 RKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHccCCchhccCHHHHhh
Confidence 9999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=295.90 Aligned_cols=257 Identities=20% Similarity=0.303 Sum_probs=198.6
Q ss_pred HhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 475 ACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
-.+|| +++..||.|+||.|..++++ +++.+|.|++.+-.... ......|.+|-.+|..-+.+-||.++-.|.+..
T Consensus 73 ~~~Df-eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlK--r~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~- 148 (1317)
T KOG0612|consen 73 KAEDF-EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLK--RAETACFREERDIMVFGNSEWIVQLHYAFQDER- 148 (1317)
T ss_pred CHHhh-HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhh--chhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc-
Confidence 34556 77888999999999999975 56778888876522111 122356899999999999999999998888877
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
+.|+|||||+||||..++.. ...++...+..++..|.-||.-+|+.| +|||||||+|||||..|++||+|||.+-
T Consensus 149 -~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 -YLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred -ceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecccCcEeeccchhHH
Confidence 78999999999999999853 336888888899999999999999999 9999999999999999999999999643
Q ss_pred ----------CCCCCCccccchhhhc----c-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 634 ----------NTTAAKTGSAAMELLE----T-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 634 ----------~~~~~~~~~~aPE~~~----~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
....|++-|.+||++. + +.|+..+|.||+||++|||+.|..||..+ ++.+-..+++.....+
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad--slveTY~KIm~hk~~l- 300 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD--SLVETYGKIMNHKESL- 300 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH--HHHHHHHHHhchhhhc-
Confidence 2345788899999973 3 68999999999999999999999999643 3444444444331111
Q ss_pred cccCCcccccc--HHHHHHHHHHHHHcccCCCCCCCC---HHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 699 DIVDPTLKSFQ--ENVLEELLVVIKNCVHPDPKQRPS---MRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 699 ~~~d~~l~~~~--~~~~~~l~~Li~~Cl~~dP~~RPs---~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
.|| .+++++..+||.+.+. +|+.|.. +.|+-. +|.+....|+.++
T Consensus 301 --------~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~-------------HpFF~g~~W~~iR 350 (1317)
T KOG0612|consen 301 --------SFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN-------------HPFFEGIDWDNIR 350 (1317)
T ss_pred --------CCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh-------------CccccCCChhhhh
Confidence 122 2367788899988775 6888877 666643 4555556665443
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=255.59 Aligned_cols=254 Identities=23% Similarity=0.353 Sum_probs=192.1
Q ss_pred HHHHHHHhhcccccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeE
Q 004124 469 RSELEAACEDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIG 546 (772)
Q Consensus 469 ~~el~~~~~~f~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g 546 (772)
++|+-+.|+ +.+|+|+|+.|--++ +.+|.++|||++.+.. ...+.+..+|++++.+. .|+||+.+++
T Consensus 75 F~d~YkLt~------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-----gHsR~RvfREVe~f~~Cqgh~nilqLie 143 (463)
T KOG0607|consen 75 FEDMYKLTS------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-----GHSRSRVFREVETFYQCQGHKNILQLIE 143 (463)
T ss_pred HHHHHHhHH------HHhcCccceeeeeeeeeccchhhhhhhhhcCC-----chHHHHHHHHHHHHHHhcCCccHHHHHH
Confidence 456666554 346789999999887 7889999999986542 34567889999999999 6999999999
Q ss_pred EEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---Cc
Q 004124 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YA 623 (772)
Q Consensus 547 ~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~ 623 (772)
+++++. ..|||||-|.+|.|..+++ ....+++..+-++..+||.||.|||.++ |.||||||+|||-.+. --
T Consensus 144 fFEdd~--~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 144 FFEDDT--RFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred Hhcccc--eEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCc
Confidence 999988 5699999999999999886 4456889999999999999999999998 9999999999998543 45
Q ss_pred EEEccccCccC----------------CCCCCccccchhhh-----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC
Q 004124 624 AKISDFSFWNN----------------TTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGS 682 (772)
Q Consensus 624 ~kLsDFGla~~----------------~~~~~~~~~aPE~~-----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~ 682 (772)
+||+||.+... ...+...|||||+. ....|+.++|.||+|||||-|+.|..||.+.-+.
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~ 297 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA 297 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence 89999976431 12234468999985 4557899999999999999999999999753322
Q ss_pred HHHHHHHHhhc--CCCCccccCCcccccc----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 683 LENWASEYLKG--EQPLKDIVDPTLKSFQ----ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 683 ~~~~~~~~~~~--~~~~~~~~d~~l~~~~----~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.-.|-+...-. +..+.+-+....-+++ ..++.+..+++...+..|+.+|-++.++++
T Consensus 298 dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 298 DCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 22221000000 0000001111111222 245778899999999999999999999886
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=234.06 Aligned_cols=246 Identities=17% Similarity=0.227 Sum_probs=182.6
Q ss_pred ccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+++|+|+||+||||+ +++++.||+|.+......+. ......+||.+++.++|+|||+++++...+. ..-+|+|
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddeg---vpssalreicllkelkhknivrl~dvlhsdk--kltlvfe 81 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG---VPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFE 81 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC---CcHHHHHHHHHHHHhhhcceeehhhhhccCc--eeEEeHH
Confidence 4678999999999999 55678899999887654432 2356789999999999999999999988777 6789999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC---
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA--- 638 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~--- 638 (772)
||. .+|..+.. .-.+.++......++.|+.+||.|+|+++ +.|||+||.|.|++.+|+.|++|||+++.....
T Consensus 82 ~cd-qdlkkyfd-slng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 82 FCD-QDLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred Hhh-HHHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 995 48887764 34567899999999999999999999998 999999999999999999999999998754332
Q ss_pred ------Cccccchhhhcc-CCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc----
Q 004124 639 ------KTGSAAMELLET-SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK---- 706 (772)
Q Consensus 639 ------~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~---- 706 (772)
+..|.+|.++.+ .-|++..|+||-|||+.|+.. |++-|.+. +..+..+++.+--....+-..|.+.
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~--dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN--DVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC--cHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 224567777644 568999999999999999998 55556433 3333333333211111111111110
Q ss_pred --------------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 707 --------------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 --------------~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.....-.+++++.+.-+|.+|.++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 011122233457778888889999999998765
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=264.88 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=188.2
Q ss_pred cccccCccceEEEEEEE-EcCCcEEEEEEeeec--ccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~--~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++..+|+|+|+.||||. +...+.||||+-... ...+..+++.+...+|.++.+.|+||.||++|+|+.-+.. ..|-
T Consensus 467 lLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd-sFCT 545 (775)
T KOG1151|consen 467 LLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD-SFCT 545 (775)
T ss_pred HHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc-ccee
Confidence 55678899999999998 556778888875432 2223334455667899999999999999999999875443 4689
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~~~ 635 (772)
|+|||++.+|.-||+ ..+.++...+..|+.||..||.||.+..|||||-||||.||||- ..|.+||+|||+++.+
T Consensus 546 VLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 546 VLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 999999999999985 45678999999999999999999999999999999999999994 3489999999998754
Q ss_pred CC----------------CCccccchhhhc----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 636 TA----------------AKTGSAAMELLE----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 ~~----------------~~~~~~aPE~~~----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
.. ++..|.+||.+- ..+.+.|.||||.|||+|..+.|+.||.. +..-.+.+. ..
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh-nqsQQdILq----eN- 697 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH-NQSQQDILQ----EN- 697 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC-chhHHHHHh----hh-
Confidence 32 333567999873 34678999999999999999999999953 222222221 11
Q ss_pred CCccccCCcccccc--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 PLKDIVDPTLKSFQ--ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~~~d~~l~~~~--~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++...-..|+ +.+..+..++|++|+++.-++|....++..
T Consensus 698 ---TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 ---TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ---chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11111111122 345678889999999999999988777654
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-29 Score=278.59 Aligned_cols=241 Identities=23% Similarity=0.309 Sum_probs=193.5
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC---CCce
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED---EPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~---~~~~ 555 (772)
+++..+|.|.+|.||+++ .++++.+|||+...... ..++...|.++++.. +|||++.+||++... .+..
T Consensus 22 ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d------~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 22 EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED------EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred EEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc------ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 677888899999999998 55778888887765432 235677888999888 799999999998643 2337
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc--
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-- 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~-- 633 (772)
.+||||||.+|+.-++++......+.|.....|++.++.|+.+||... ++|||||-.|||++.++.+|+.|||++.
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 899999999999999998666788999999999999999999999887 9999999999999999999999999864
Q ss_pred -------CCCCCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 634 -------NTTAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 634 -------~~~~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
.+..+++.|||||++. ...|+.++|+||+||+..||.-|..|+.. ......+..+-. .|
T Consensus 174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D--mHPmraLF~IpR--NP----- 244 (953)
T KOG0587|consen 174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD--MHPMRALFLIPR--NP----- 244 (953)
T ss_pred ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC--cchhhhhccCCC--CC-----
Confidence 3455778999999973 34577899999999999999999999842 111111110000 11
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.|.+. -++...+++.++|..|+.+|-++||++.++++
T Consensus 245 PPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 245 PPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred Ccccc-chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11111 24678899999999999999999999998875
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=267.34 Aligned_cols=236 Identities=21% Similarity=0.314 Sum_probs=191.4
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
+.+|.|.||+||-|+. ++|+.||||++.+-... ...+.++++|+.+|.+++||.||.+--.|+..+ ..++|||-
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp---~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e--rvFVVMEK 644 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP---TKQESQLRNEVAILQNLHHPGIVNLECMFETPE--RVFVVMEK 644 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCC---CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc--eEEEEehh
Confidence 4578899999999995 58999999998765433 334578999999999999999999999999887 78999999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccCCC---
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNTT--- 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla~~~~--- 636 (772)
+ +|+..+.+-..+.+.++......++.||+.||.|||.++ |||+||||+||||... -.+||+|||+|+...
T Consensus 645 l-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 645 L-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred h-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 9 678777776677788999888899999999999999998 9999999999999643 479999999997543
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.+++.|.|||+++.+.|...-|+||.|||+|--++|..||.. +.++.+.++... .+-|. ..-.+
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE-dEdIndQIQNAa--------FMyPp--~PW~e 790 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE-DEDINDQIQNAA--------FMYPP--NPWSE 790 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC-ccchhHHhhccc--------cccCC--Cchhh
Confidence 467889999999999999999999999999999999999963 333333222110 01010 01134
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIA 738 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl 738 (772)
+..+..++|...++..-++|-|....+
T Consensus 791 is~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 567788899999999888998877654
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=260.28 Aligned_cols=232 Identities=18% Similarity=0.255 Sum_probs=185.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+..+|+|+||.|..|..+ +.+.+|||++++..... ....+--+.|-++|.-- +-|.+|.+..+++..+ ..|.
T Consensus 352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ--dDDvectm~EKrvLAL~~kppFL~qlHScFQTmD--RLyF 427 (683)
T KOG0696|consen 352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ--DDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD--RLYF 427 (683)
T ss_pred ceEEEeccCccceeeeecccCcchhhhhhhhccceeee--cCcccceehhhhheecCCCCchHHHHHHHhhhhh--heee
Confidence 45667788999999999865 45678888876543222 22223344556666655 6789999999998877 5799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC----
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~---- 634 (772)
||||+.+|+|.-+++ .-+.+.+..+..+|..||-||-|||+++ ||.||||.+|||||.+|.+||+|||+++.
T Consensus 428 VMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred EEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccCCceEeeecccccccccC
Confidence 999999999987764 4456778888899999999999999999 99999999999999999999999999763
Q ss_pred -----CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 635 -----TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 -----~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
...+++.|+|||.+....|+..+|.|||||+||||+.|+.||++++ ..+..+.+..... .++
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD--E~elF~aI~ehnv-----------syP 570 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELFQAIMEHNV-----------SYP 570 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHccC-----------cCc
Confidence 3346778999999999999999999999999999999999997554 3344444433221 245
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPS 733 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs 733 (772)
...+.+..++....+.+.|.+|..
T Consensus 571 KslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 571 KSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ccccHHHHHHHHHHhhcCCccccC
Confidence 667788899999999999999954
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=258.89 Aligned_cols=248 Identities=19% Similarity=0.250 Sum_probs=190.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-C-Cc----ccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-H-KN----FVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-H-pN----IV~l~g~~~~~~ 552 (772)
+++++.+|+|.||.|-++... .+..||||+++.. ..+.+.-+-|+++|.++. + |+ +|.+.+|+.-.+
T Consensus 91 y~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V------~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 91 YEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV------DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred eehhhhhcCCcccceEEEeecCCCceehHHHHHHH------HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 478899999999999999854 5688999887532 334566778999999993 2 33 778888887777
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC------------
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------------ 620 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~------------ 620 (772)
+.|+|+|.+ +-|++++|..+...+++...+..|+.|++++++|||+.+ ++|-||||+|||+-+
T Consensus 165 --hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 165 --HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred --ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceEEEeccCCc
Confidence 789999998 559999998777788999999999999999999999998 999999999999832
Q ss_pred --------CCcEEEccccCccCCC------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-HH
Q 004124 621 --------DYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 685 (772)
Q Consensus 621 --------~~~~kLsDFGla~~~~------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~ 685 (772)
+..+||.|||-|+... ..+..|.|||++.+-.++.++||||+||||+|+.||..-|...+..- ..
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa 319 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA 319 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence 3358999999887543 34568999999999999999999999999999999999887554211 11
Q ss_pred HHHHHhhcCCCCccc-------------cC---------------Ccc-----ccccHHHHHHHHHHHHHcccCCCCCCC
Q 004124 686 WASEYLKGEQPLKDI-------------VD---------------PTL-----KSFQENVLEELLVVIKNCVHPDPKQRP 732 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~-------------~d---------------~~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RP 732 (772)
.++.++ |..|...+ +| +-. ....+....++.+|+.+++..||.+|+
T Consensus 320 MMerIl-Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri 398 (415)
T KOG0671|consen 320 MMERIL-GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRI 398 (415)
T ss_pred HHHHhh-CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccc
Confidence 222222 21111000 00 000 001133456799999999999999999
Q ss_pred CHHHHHH
Q 004124 733 SMRGIAA 739 (772)
Q Consensus 733 s~~evl~ 739 (772)
|+.|++.
T Consensus 399 Tl~EAL~ 405 (415)
T KOG0671|consen 399 TLREALS 405 (415)
T ss_pred cHHHHhc
Confidence 9999875
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=281.52 Aligned_cols=246 Identities=16% Similarity=0.219 Sum_probs=156.0
Q ss_pred ccccccCccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEE----EcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC----EED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~----~~~ 551 (772)
++.+.+|+|+||.||+|+... +..+|+|++...... +.+..| .+....+.+++.++..+ ...
T Consensus 135 ~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-------e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 135 VLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-------EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred EEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-------HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 677889999999999999754 688999986532211 111111 12222233333322211 111
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccC------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCC
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAE------------------HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQS 613 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~------------------~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp 613 (772)
.....++||||+++|+|.++++..... .........|+.|++.||+|||+.+ |+||||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDLKP 283 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDVKP 283 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcCCH
Confidence 122579999999999999988643210 0112334579999999999999988 99999999
Q ss_pred CCeEECC-CCcEEEccccCccCCC----------CCCccccchhhhccC----------------------CCCCCCchH
Q 004124 614 SSIYLTE-DYAAKISDFSFWNNTT----------AAKTGSAAMELLETS----------------------AVDLESNVY 660 (772)
Q Consensus 614 ~NILld~-~~~~kLsDFGla~~~~----------~~~~~~~aPE~~~~~----------------------~~s~ksDVw 660 (772)
+|||+++ ++.+||+|||+++... .++..|+|||.+... .++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999986 5899999999987432 234579999965221 245677999
Q ss_pred HHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc---cccCCc----cc---cccHHHHHHHHHHHHHcccCCCCC
Q 004124 661 SFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK---DIVDPT----LK---SFQENVLEELLVVIKNCVHPDPKQ 730 (772)
Q Consensus 661 SfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~----l~---~~~~~~~~~l~~Li~~Cl~~dP~~ 730 (772)
||||+||||+++..+++. ....+............ ...++. .. ...........+|+.+|++.||++
T Consensus 364 SlGviL~el~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDS---NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred HHHHHHHHHHhCcCCCch---HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 999999999998766532 12221111111100000 000110 00 000111234568999999999999
Q ss_pred CCCHHHHHHH
Q 004124 731 RPSMRGIAAK 740 (772)
Q Consensus 731 RPs~~evl~~ 740 (772)
|||+.|+++.
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999874
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-28 Score=272.22 Aligned_cols=250 Identities=16% Similarity=0.241 Sum_probs=172.9
Q ss_pred hcccccccccCccceEEEEEEEE-----------------cCCcEEEEEEeeecccchhh---------hhHHHHHHHHH
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTL-----------------SSGVEIAVTSTSVKSRADWS---------KNLESQFRKKI 530 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~-----------------~~~~~vaVK~~~~~~~~~~~---------~~~~~~f~~Ei 530 (772)
++| ++..++|+|+||+||+|.. ..++.||||++......... ....+.+..|+
T Consensus 145 d~F-~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 145 DDF-QLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred cCc-eEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 344 5678889999999999964 23467999988643211100 00122345577
Q ss_pred HHHhcCCCCcc-----cceeEEEEcCC------CceEEEEEeccCCCChhhhhhhhc----------------------c
Q 004124 531 DTLSKVNHKNF-----VNLIGYCEEDE------PFTRMMVFEYSPNGSLFEHLHIQE----------------------A 577 (772)
Q Consensus 531 ~~L~~l~HpNI-----V~l~g~~~~~~------~~~~~LV~Ey~~~GsL~~~L~~~~----------------------~ 577 (772)
.++.+++|.++ ++++++|.... ....+|||||+++|+|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 78888876654 77888876421 125799999999999999986421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC----------CCccccchhh
Q 004124 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA----------AKTGSAAMEL 647 (772)
Q Consensus 578 ~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~----------~~~~~~aPE~ 647 (772)
..++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... .+..|++||.
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 23567888999999999999999988 99999999999999999999999999854321 1356999998
Q ss_pred hccCC--------------------C--CCCCchHHHHHHHHHHHcCCC-cccCCC----------CCHHHHHHHHhhcC
Q 004124 648 LETSA--------------------V--DLESNVYSFGTILFEMITGRI-SYSIEN----------GSLENWASEYLKGE 694 (772)
Q Consensus 648 ~~~~~--------------------~--s~ksDVwSfGvvL~ELltG~~-P~~~~~----------~~~~~~~~~~~~~~ 694 (772)
+.... | ..+.||||+||++|||++|.. |+.... .+...|.. ..+.
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~~ 459 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKGQ 459 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hccc
Confidence 64321 1 235799999999999999875 653211 11111111 0000
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP---KQRPSMRGIAA 739 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP---~~RPs~~evl~ 739 (772)
. .+ . .......+...+++.+++..+| .+|+|++|+++
T Consensus 460 ~-----~~--~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 K-----YD--F-SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred C-----CC--c-ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0 00 0 0122345778899999999766 68999999986
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-29 Score=264.97 Aligned_cols=234 Identities=18% Similarity=0.224 Sum_probs=194.7
Q ss_pred ccccccCccceEEEEEEEEcCCc-EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGV-EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~-~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|-|+||.|-.++.+... .+|+|.++++...+ ....+....|-.+|...+.|.||++|-.|.+.. +.|+.
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd--tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k--yvYmL 498 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD--TKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK--YVYML 498 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccc--hhHHHHHHhHHHHHHhcCchHHHHHHHHhccch--hhhhh
Confidence 56788999999999998876544 37888887666544 334567888999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
||-|-+|.|...|+ ..+.++......++..+.+|++|||+++ ||.|||||+|.+||.+|-+||.|||+|+...
T Consensus 499 mEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 499 MEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999999995 4566888888889999999999999999 9999999999999999999999999997543
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.+++.|.|||.+.....+.++|.||+||++|||+||++||... +.......+++|... ..++..
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~--dpmktYn~ILkGid~---------i~~Pr~ 643 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV--DPMKTYNLILKGIDK---------IEFPRR 643 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--chHHHHHHHHhhhhh---------hhcccc
Confidence 4567889999999999999999999999999999999999643 334444445555321 134556
Q ss_pred HHHHHHHHHHHcccCCCCCCCC
Q 004124 712 VLEELLVVIKNCVHPDPKQRPS 733 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs 733 (772)
......++|++....+|.+|..
T Consensus 644 I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 644 ITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred cchhHHHHHHHHHhcCcHhhhc
Confidence 6677888999999999999975
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=232.26 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=160.6
Q ss_pred cccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+..+|+|+||.|-+-++ .+|...|||.+...-. .+..++...|+.+..+. ..|.+|.+||.+.... ..++-
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn----~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg--dvwIc 123 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN----SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG--DVWIC 123 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcC----hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc--cEEEe
Confidence 456788999999988874 5789999999875432 34456788888876554 7999999999766555 57999
Q ss_pred EeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc----
Q 004124 560 FEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---- 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~---- 633 (772)
||.|. -||..+... +....+++...-+||..+.+||.|||++- .+||||+||+|||++.+|++|+||||++-
T Consensus 124 ME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL-~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 124 MELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL-SVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh-hhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99995 488776542 24567888888999999999999999742 39999999999999999999999999753
Q ss_pred ----CCCCCCccccchhhh----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc
Q 004124 634 ----NTTAAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 634 ----~~~~~~~~~~aPE~~----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~ 693 (772)
....+-..|||||.+ ....|+.||||||+|+++.||.+++.||+..... -+..+.++.+
T Consensus 202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp-F~qLkqvVee 268 (282)
T KOG0984|consen 202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP-FQQLKQVVEE 268 (282)
T ss_pred hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH-HHHHHHHhcC
Confidence 345667789999986 3447999999999999999999999999744433 3334444443
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=272.55 Aligned_cols=231 Identities=23% Similarity=0.368 Sum_probs=172.2
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++|.+.+| +.||+|.++ ++.||||++... ...-..+||..|..- +|||||++|+.-.++. +.||.
T Consensus 515 eilG~Gs~G--t~Vf~G~ye-~R~VAVKrll~e--------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIa 581 (903)
T KOG1027|consen 515 EILGYGSNG--TVVFRGVYE-GREVAVKRLLEE--------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIA 581 (903)
T ss_pred HHcccCCCC--cEEEEEeeC-CceehHHHHhhH--------hHHHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEE
Confidence 455554444 258999997 679999977522 223467899999988 6999999977666555 78999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-----CCcEEEccccCc
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFW 632 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-----~~~~kLsDFGla 632 (772)
.|.|. -+|.+++... ......-...+.+..|++.||+|||+++ ||||||||.||||+. ..+++|+|||++
T Consensus 582 lELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 582 LELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred ehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccc
Confidence 99995 5999999652 1111111334678899999999999998 999999999999965 368999999998
Q ss_pred cCCC------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcC-CCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 633 NNTT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITG-RISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 633 ~~~~------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
+... .|+.+|+|||.+....-+.++||+|+|||+|..+|| ++||... .+.-..++.+...+..
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~----~~R~~NIl~~~~~L~~ 734 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS----LERQANILTGNYTLVH 734 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch----HHhhhhhhcCccceee
Confidence 7443 356789999999988888899999999999999995 9999421 1111223333322221
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. .. +++ +..+||.+|++.+|..||++.+|+.
T Consensus 735 L~-----~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 LE-----PL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ec-----cC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11 11 122 7889999999999999999999974
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=240.65 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=181.1
Q ss_pred cccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC------Cc
Q 004124 482 IIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------PF 554 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------~~ 554 (772)
-+.++|+|.||.||+|+.+ .++.||+|++......+ ..-....+|+++|..++|+|++.++.+|.... ..
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe---GfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc---CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 3467889999999999954 56778887664322221 11234678999999999999999999886421 22
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..|+|+++|+. +|.-+|. .....++...+.+++.++..||.|+|... |+|||+|++|+||+.++.+||+|||+++.
T Consensus 98 t~ylVf~~ceh-DLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeeHHHhhh-hHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 46999999976 8888874 33467889999999999999999999988 99999999999999999999999999863
Q ss_pred CCC-------C------Cccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC----
Q 004124 635 TTA-------A------KTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP---- 696 (772)
Q Consensus 635 ~~~-------~------~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~---- 696 (772)
... + +-.|..||.+. ...|+++.|||.-|||+.||.||.+-+......-.-..-+.+.|...
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 221 1 23467999875 56799999999999999999999877754322111111122222110
Q ss_pred -------CccccC-Ccccc----ccHHHH------HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 -------LKDIVD-PTLKS----FQENVL------EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 -------~~~~~d-~~l~~----~~~~~~------~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.+.+. +.+.. ..++.. ++..+|+..++..||.+|+.+++++..
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 000000 00000 011222 367899999999999999999998764
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=231.45 Aligned_cols=244 Identities=17% Similarity=0.267 Sum_probs=188.1
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.++|+|.|+.||.|. ..+.+.++||.++.. ..+.+.+|+++|..++ ||||++++++..++..-...|
T Consensus 41 eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 41 EIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred HHHHHHcCccHhhHhcccccCCCceEEEeeechH--------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 788899999999999998 556778888887642 2467899999999997 999999999998876656789
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccCCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNNTTA 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~~~~ 637 (772)
|+||+.+-+...+. +.++-..+..++.++++||.|+|+.| |+|||+||.|+++|.. ...+|.|+|+|.....
T Consensus 113 iFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99999998776554 44667778889999999999999999 9999999999999965 6799999999876554
Q ss_pred CC--------ccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh-hcCC-------CCccc
Q 004124 638 AK--------TGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL-KGEQ-------PLKDI 700 (772)
Q Consensus 638 ~~--------~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~-~~~~-------~~~~~ 700 (772)
+. ..+..||.+ ....|+..-|+|||||++.+|+..+.||..+..+..+.++-.. -|.. .+.-.
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 43 345689986 4567888999999999999999999999765555444432111 0000 01111
Q ss_pred cCCcccc------------c-----cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VDPTLKS------------F-----QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~------------~-----~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+||...+ + ..-..+++.+++.+.+..|-.+|+|++|.+.
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 2222111 1 1123478999999999999999999999875
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=256.19 Aligned_cols=203 Identities=19% Similarity=0.277 Sum_probs=164.1
Q ss_pred HHHHHHHhhccc--ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCccccee
Q 004124 469 RSELEAACEDFS--NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLI 545 (772)
Q Consensus 469 ~~el~~~~~~f~--~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~ 545 (772)
|.-|+++.-+-+ -.|+.||-|+||.|..+.. ++...+|.|.+.+++.. ..+.....+.|-.||...+.+-||+||
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl--~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL--MRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHH--hhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 334444433322 4678899999999999974 44556777776554322 233445678899999999999999999
Q ss_pred EEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004124 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 546 g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
-.|.+.+ ..|+||||++||++..+|.. -+.+.+..+..++..+..|+++.|..| +|||||||+|||||.+|.+|
T Consensus 696 ySFQDkd--nLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 696 YSFQDKD--NLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred EEeccCC--ceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccCCcee
Confidence 9998888 67999999999999999853 355777778888889999999999998 99999999999999999999
Q ss_pred EccccCccCC---------------------------------------------------CCCCccccchhhhccCCCC
Q 004124 626 ISDFSFWNNT---------------------------------------------------TAAKTGSAAMELLETSAVD 654 (772)
Q Consensus 626 LsDFGla~~~---------------------------------------------------~~~~~~~~aPE~~~~~~~s 654 (772)
|+|||++... ..++..|+|||++....|+
T Consensus 770 LTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~ 849 (1034)
T KOG0608|consen 770 LTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT 849 (1034)
T ss_pred eeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc
Confidence 9999985310 0133468899999999999
Q ss_pred CCCchHHHHHHHHHHHcCCCcccCC
Q 004124 655 LESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 655 ~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
.-+|.||.|||||||+.|+.||...
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCC
Confidence 9999999999999999999999643
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=227.05 Aligned_cols=202 Identities=30% Similarity=0.466 Sum_probs=173.7
Q ss_pred cCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+|.|.+|.||+++... ++.+++|+........ ..+.+.+|++.++.++|++|+++++++.... ..++++||++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS----LLEELLREIEILKKLNHPNIVKLYGVFEDEN--HLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh----HHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--eEEEEEecCC
Confidence 4789999999999764 8889999887543221 3467999999999999999999999998765 6799999999
Q ss_pred CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCCC------
Q 004124 565 NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTTA------ 637 (772)
Q Consensus 565 ~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~~~~~------ 637 (772)
+++|.+++.... ..+++..+..++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+.....
T Consensus 75 ~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (215)
T cd00180 75 GGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK 151 (215)
T ss_pred CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence 999999985322 46899999999999999999999988 999999999999999 89999999998754322
Q ss_pred ---CCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 638 ---AKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 638 ---~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
....|.+||..... .++.+.|+|++|++++|+
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 34567899998776 888999999999999999
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++.+++..|++.+|++||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457789999999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=238.93 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=111.2
Q ss_pred ccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-----CC---cccceeEEEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----HK---NFVNLIGYCE 549 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----Hp---NIV~l~g~~~ 549 (772)
.+.++.++|-|-|++||.+.. ...+.||+|+.+.. ..+.+..+.||++|++++ |+ .||+|++.|.
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA------qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA------QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehh------hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 357889999999999999984 45678899887532 345567889999999984 33 5999999987
Q ss_pred cCC--CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEEC
Q 004124 550 EDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 550 ~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld 619 (772)
..+ ..+.|||+|+. +-+|..++.....+.++...+.+|++||+.||.|||. |+ |||-||||+|||+.
T Consensus 153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLC 222 (590)
T ss_pred ecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeee
Confidence 543 34789999999 6699999987778889999999999999999999995 78 99999999999983
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-26 Score=232.78 Aligned_cols=237 Identities=19% Similarity=0.293 Sum_probs=181.4
Q ss_pred cccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
+| .++..+|+|+|..|..++++ +.+.+|+|++++....+. ....-...|-.+..+. +||.+|.+..++.... .
T Consensus 251 df-~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndd--edidwvqtek~vfe~asn~pflvglhscfqtes--r 325 (593)
T KOG0695|consen 251 DF-DLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDD--EDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--R 325 (593)
T ss_pred cc-eeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCc--ccchhHHhhHHHHHhccCCCeEEehhhhhcccc--e
Confidence 44 56778889999999999965 556778887764332221 1112233444444444 7999999999998776 5
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN- 634 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~- 634 (772)
.+.|.||+++|+|.-+++ ..+.++...+..+...|..||.|||+.+ ||.||||.+|||+|.+|.+|++|+|+++.
T Consensus 326 lffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccCCceeecccchhhcC
Confidence 799999999999987774 4456888888889999999999999999 99999999999999999999999999763
Q ss_pred --------CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC-----CCCHHHHHHHHhhcCCCCcccc
Q 004124 635 --------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE-----NGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 635 --------~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
...+++.|.|||.+++..|....|.|++||+++||+.|+.||+.. +.+.+++...++-+.+.
T Consensus 402 l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----- 476 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----- 476 (593)
T ss_pred CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-----
Confidence 334677899999999999999999999999999999999999843 23445555444433110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCC
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 733 (772)
..+...+.+...+++.-+.+||.+|..
T Consensus 477 -----riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 477 -----RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -----cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 012233455667888899999999854
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.3e-27 Score=231.49 Aligned_cols=247 Identities=18% Similarity=0.238 Sum_probs=180.3
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc---eEEEE
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF---TRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~---~~~LV 559 (772)
+.+|.|+||.||..+. ++|+.|+.|++..... .-...+++.+|+++|..++|.|+...+++....... +.|+|
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq---~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQ---NLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHH---HHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4678999999999985 4789999988753221 122346789999999999999999999987654321 46889
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~- 638 (772)
+|.|. .+|...+- ..+.++-....-+.+||.+||.|||+.+ |.||||||.|.|++.+...||+|||+++.....
T Consensus 136 TELmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCceEEecccccccccchhh
Confidence 99995 48877763 4567888888889999999999999998 999999999999999999999999999854332
Q ss_pred ---------Cccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCC--------------CHHHHHHHHhhcC
Q 004124 639 ---------KTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENG--------------SLENWASEYLKGE 694 (772)
Q Consensus 639 ---------~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--------------~~~~~~~~~~~~~ 694 (772)
+.+|.|||.+.+ ..|+.+.||||.|||+.|++-.+.-|...+. +++. ++..-.|.
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~Ea-Mr~ACEGA 289 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEA-MKYACEGA 289 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHH-HHHHhhhh
Confidence 236889999865 5699999999999999999998877754321 1111 11000000
Q ss_pred CCCccccC-----Cccc---c--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 695 QPLKDIVD-----PTLK---S--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 695 ~~~~~~~d-----~~l~---~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
-..++. |... . .+.....+...+...++..||++|.+..+.+..+
T Consensus 290 --k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 290 --KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred --HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 000111 1111 0 1122234566778889999999999998887654
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=221.90 Aligned_cols=203 Identities=26% Similarity=0.350 Sum_probs=165.1
Q ss_pred cccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+...+|.|++|.||++.... +..+++|........ ...+.+.+|++.+.+++|+|++++++++.... ..++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~ 76 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----KQREEFLREIRILKKLKHPNIVKLYGVFEDPE--PLYLVM 76 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----HHHHHHHHHHHHHHhCCCCChhhheeeeecCC--ceEEEE
Confidence 44667889999999999765 788999988754322 23568999999999999999999999988766 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++++|.+++..... .+++.....++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 77 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 77 EYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred eccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 99999999999864321 2889999999999999999999987 99999999999999999999999998654322
Q ss_pred -------CCccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc
Q 004124 638 -------AKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 638 -------~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~ 693 (772)
+...|++||.. ....++.++|||+||++++||++|+.||................+
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 23457899988 667788899999999999999999999954233333333333333
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=238.28 Aligned_cols=254 Identities=19% Similarity=0.243 Sum_probs=192.7
Q ss_pred HHhhcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC------CCcccceeE
Q 004124 474 AACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN------HKNFVNLIG 546 (772)
Q Consensus 474 ~~~~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~------HpNIV~l~g 546 (772)
+..++-|++.+..|.|-|++|.+|.. ..|..||||++.... ...+.=+.|+++|++|. --|+++++-
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE------~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE------VMHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch------HHhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 34466678999999999999999984 457899999987543 23345578999999994 347899988
Q ss_pred EEEcCCCceEEEEEeccCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcE
Q 004124 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAA 624 (772)
Q Consensus 547 ~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~ 624 (772)
.|...+ +.|||+|-. ..+|.++|+.- ....|....+..++.|+.-||..|..|+ |+|.||||.|||+++. ..+
T Consensus 502 ~F~hkn--HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 502 HFKHKN--HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNIL 576 (752)
T ss_pred Hhhhcc--eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCccee
Confidence 887777 889999987 56999998643 2345778888999999999999999999 9999999999999876 668
Q ss_pred EEccccCccCCCCC-------CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCC
Q 004124 625 KISDFSFWNNTTAA-------KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQP 696 (772)
Q Consensus 625 kLsDFGla~~~~~~-------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~ 696 (772)
||||||.|...... ...|.|||++.+..|+...|+||.||+||||.||+.-|.+...+ +..+.. -++|.-+
T Consensus 577 KLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m-e~KGk~p 655 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM-ELKGKFP 655 (752)
T ss_pred eeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH-HhcCCCc
Confidence 99999987654432 12578999999999999999999999999999999999754433 222211 1111110
Q ss_pred ---------CccccC--------------------------C------------ccccccHHHHHHHHHHHHHcccCCCC
Q 004124 697 ---------LKDIVD--------------------------P------------TLKSFQENVLEELLVVIKNCVHPDPK 729 (772)
Q Consensus 697 ---------~~~~~d--------------------------~------------~l~~~~~~~~~~l~~Li~~Cl~~dP~ 729 (772)
..+-+| | .+++-......++.+|+..|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 011111 1 01111233456788999999999999
Q ss_pred CCCCHHHHHH
Q 004124 730 QRPSMRGIAA 739 (772)
Q Consensus 730 ~RPs~~evl~ 739 (772)
+|.|..+.++
T Consensus 736 KRit~nqAL~ 745 (752)
T KOG0670|consen 736 KRITVNQALK 745 (752)
T ss_pred hcCCHHHHhc
Confidence 9999998765
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-26 Score=249.44 Aligned_cols=240 Identities=19% Similarity=0.224 Sum_probs=188.3
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++..+|.|+||.|||++. .++...|||.++.....+ .+-..+|+-+++..+|||||.++|-+...+ ..++.
T Consensus 18 ellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-----~~~iqqei~~~~dc~h~nivay~gsylr~d--klwic 90 (829)
T KOG0576|consen 18 ELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-----FSGIQQEIGMLRDCRHPNIVAYFGSYLRRD--KLWIC 90 (829)
T ss_pred hheeeecCCcccchhhhcccccCchhhheeeeccCCcc-----ccccccceeeeecCCCcChHHHHhhhhhhc--CcEEE
Confidence 6778899999999999995 467888999887654333 345678999999999999999999887766 56999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc------
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------ 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~------ 633 (772)
||||.+|+|++..+ ....++..+...+++...+|++|||+.+ -+|||||-.|||+.+.+.+|++|||.+.
T Consensus 91 MEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred EEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeecccCceeecccCchhhhhhhh
Confidence 99999999999875 3567888899999999999999999988 8999999999999999999999999753
Q ss_pred ---CCCCCCccccchhhh---ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 634 ---NTTAAKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 634 ---~~~~~~~~~~aPE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
....++++|||||+. ..+.|..++|||+.|++..|+.--+.|...- ....... .+.. ...+|....
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl--hpmr~l~-LmTk-----S~~qpp~lk 238 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL--HPMRALF-LMTK-----SGFQPPTLK 238 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc--chHHHHH-Hhhc-----cCCCCCccc
Confidence 334578899999985 5678999999999999999998877664211 1111111 1111 111111111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
-.....+-+.++++.|+.++|++||++..+++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 22345667888999999999999999987653
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-25 Score=225.79 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=178.1
Q ss_pred ccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ceEEEE
Q 004124 485 SFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FTRMMV 559 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~~~LV 559 (772)
.+|.|.- .|--+.. -.++.|++|+.... ... ....++..+|..++..+.|+||++++.++.-... .+.|+|
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCc-ccc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 4445544 4444432 24678899887654 222 2234567899999999999999999999865431 146899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~- 638 (772)
|||| .++|...++ -.++-.....|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+++.....
T Consensus 100 ~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 100 MELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred HHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecchhheeeccchhhcccCccc
Confidence 9999 568988875 34677778899999999999999998 999999999999999999999999998755433
Q ss_pred -------CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc-------------
Q 004124 639 -------KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK------------- 698 (772)
Q Consensus 639 -------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~------------- 698 (772)
+..|.|||++.+..|.+.+||||.||++.||++|+.-|. +...+.+|.+..-.-+.+-.
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~-g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~y 251 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP-GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNY 251 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec-CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHH
Confidence 346789999988889999999999999999999998886 33344445332221111100
Q ss_pred -------------ccc-CCccc---cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 699 -------------DIV-DPTLK---SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 699 -------------~~~-d~~l~---~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.+ |.... +..+-....+.+++.+||..+|++|-+++++++.
T Consensus 252 v~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 252 VENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 00000 0111223457789999999999999999999874
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-25 Score=218.81 Aligned_cols=240 Identities=19% Similarity=0.329 Sum_probs=174.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEE-EEcCCCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGY-CEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~-~~~~~~~~~ 556 (772)
++|++.+|+|.||.+-.++++ +...+++|.+.... ...++|.+|...--.| .|.||+.-|++ ++..+ ..
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d--~Y 97 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ------TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD--AY 97 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcch------hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc--eE
Confidence 478889999999999999976 45667777665322 2246899998765555 69999999875 44444 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-C-CCCcEEEccccCccC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL-T-EDYAAKISDFSFWNN 634 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl-d-~~~~~kLsDFGla~~ 634 (772)
+.++||+|.|+|.+-+. ...+.+....+++.|++.|++|||+.+ +||||||.+|||| + +..++||+|||..+.
T Consensus 98 vF~qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred EEeeccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeecccccc
Confidence 89999999999988773 345777888899999999999999999 9999999999999 3 346899999999775
Q ss_pred CCCC------Cccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCC---CCHHHHHHHHhhcCCCCccc
Q 004124 635 TTAA------KTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIEN---GSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~~~------~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~---~~~~~~~~~~~~~~~~~~~~ 700 (772)
.... ...|.+||.... -...+.+|||.|||++|..+||+.||.... ....+|.+-.-..
T Consensus 173 ~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk------- 245 (378)
T KOG1345|consen 173 VGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK------- 245 (378)
T ss_pred cCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc-------
Confidence 4432 224678876532 235678999999999999999999997432 2233333211111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+.++......++.+..+.++-+..+|++|-...++.++
T Consensus 246 -~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 246 -NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred -CccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 112222223345667778889999999999555555443
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=225.27 Aligned_cols=248 Identities=24% Similarity=0.432 Sum_probs=195.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+++.++.+.-.|..|+|+|+ |..+++|+++++. ++....++|.+|.-.|+-+.||||..++|.|..+. ...++.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~---~t~risrdfneefp~lrifshpnilpvlgacnspp--nlv~is 266 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVRE---VTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--NLVIIS 266 (448)
T ss_pred hhhhhhccCCCccccccccc-Ccchhhhhhhhhh---cchhhcchhhhhCcceeeecCCchhhhhhhccCCC--CceEee
Confidence 45566777777899999998 4566777776543 44556678999999999999999999999998875 678999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEc--c--ccCccCCC
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS--D--FSFWNNTT 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLs--D--FGla~~~~ 636 (772)
.|||.|+|+..||....-.++-.+..+++.+||+|++|||+..|-|..--|.+..|++|++.++||+ | |.+-....
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr 346 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGR 346 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecccc
Confidence 9999999999999877777888899999999999999999988767777799999999999999885 3 44433444
Q ss_pred CCCccccchhhhccCCCC---CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 AAKTGSAAMELLETSAVD---LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ~~~~~~~aPE~~~~~~~s---~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
...+.|++||.++...-+ .++|+|||.|++||+.|...||..-. .++.=++-.+.+ -....++..+
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls-pmecgmkialeg----------lrv~ippgis 415 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS-PMECGMKIALEG----------LRVHIPPGIS 415 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC-chhhhhhhhhcc----------ccccCCCCcc
Confidence 556789999998765543 57999999999999999999995211 111111111111 1123445666
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
..+.++|.-|+..||.+||.++.|+-.|+++.
T Consensus 416 ~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 416 RHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 78889999999999999999999999988764
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-25 Score=267.20 Aligned_cols=189 Identities=19% Similarity=0.200 Sum_probs=137.6
Q ss_pred hcCCC-CcccceeEEEEcCC-----CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 004124 534 SKVNH-KNFVNLIGYCEEDE-----PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIA 607 (772)
Q Consensus 534 ~~l~H-pNIV~l~g~~~~~~-----~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~Iv 607 (772)
+.++| +||+++++++.... ....+.++||+ +++|.++|.. ....+++..++.|+.||++||+|||+++ |+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g--Iv 102 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG--IV 102 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 34456 68888888872211 01347788988 6699999963 2456899999999999999999999988 99
Q ss_pred eeCCCCCCeEEC-------------------CCCcEEEccccCccCCC-------------------------CCCcccc
Q 004124 608 HRNLQSSSIYLT-------------------EDYAAKISDFSFWNNTT-------------------------AAKTGSA 643 (772)
Q Consensus 608 HrDLKp~NILld-------------------~~~~~kLsDFGla~~~~-------------------------~~~~~~~ 643 (772)
||||||+||||+ .++.+|++|||+++... .++..|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999995 35567788888765311 1344599
Q ss_pred chhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHc
Q 004124 644 AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNC 723 (772)
Q Consensus 644 aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~C 723 (772)
|||.+.+..|+.++|||||||+||||++|..|+..... ........ ...+.. .....+..+++.+|
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~ 248 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRHR------VLPPQI----LLNWPKEASFCLWL 248 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHHh------hcChhh----hhcCHHHHHHHHHh
Confidence 99999999999999999999999999999888642211 11111111 011110 11123456788999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 004124 724 VHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 724 l~~dP~~RPs~~evl~~ 740 (772)
|+.+|.+||+|.|+++.
T Consensus 249 L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 249 LHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCChhhCcChHHHhhc
Confidence 99999999999999864
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.8e-25 Score=235.73 Aligned_cols=191 Identities=18% Similarity=0.296 Sum_probs=156.4
Q ss_pred ccccccCccceEEEEEEEEcCC-cEEEEEEeeecccc--hhh-hhHHHHHHHHHHHHhcCC---CCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG-VEIAVTSTSVKSRA--DWS-KNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~-~~vaVK~~~~~~~~--~~~-~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~~~~ 553 (772)
..+..+|+|+||.|+.|.++.. ..|++|.+.+...- .|- +......-.||++|..++ |+||+++++++++++
T Consensus 564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd- 642 (772)
T KOG1152|consen 564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD- 642 (772)
T ss_pred eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC-
Confidence 5678899999999999997754 55666666432211 111 111123567999999997 999999999999988
Q ss_pred ceEEEEEecc-CCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 554 FTRMMVFEYS-PNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 554 ~~~~LV~Ey~-~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
+.||+||-. ++-+|++++. ....+++.....|..||+.|+++||+++ |||||||-+||.+|.+|.+||.|||.+
T Consensus 643 -~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 643 -YYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred -eeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecCCeEEEeeccch
Confidence 569999975 4568889884 3456899999999999999999999999 999999999999999999999999987
Q ss_pred cCC-------CCCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCccc
Q 004124 633 NNT-------TAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYS 677 (772)
Q Consensus 633 ~~~-------~~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~ 677 (772)
... ..++..|+|||++.+.+|- ..-|||++||+||.++....||.
T Consensus 718 a~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 718 AYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 543 3456789999999988875 66899999999999999998884
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=205.40 Aligned_cols=165 Identities=21% Similarity=0.240 Sum_probs=125.9
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----CCCCcc
Q 004124 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----TAAKTG 641 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~----~~~~~~ 641 (772)
|+|.++++. ....++|..+..|+.|++.||+|||+.+ ||+|||++.++.+|+ ||+++.. ..++..
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCccceee--ccceEeeccccCCCccc
Confidence 789999863 2456999999999999999999999865 999999999999999 9987642 245678
Q ss_pred ccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHH--HHHHH
Q 004124 642 SAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLE--ELLVV 719 (772)
Q Consensus 642 ~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~--~l~~L 719 (772)
|+|||.+.+..++.++|||||||++|||+||+.||..... ............... ++........... ++.++
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-LSAILEILLNGMPAD----DPRDRSNLESVSAARSFADF 144 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-hcHHHHHHHHHhccC----CccccccHHHHHhhhhHHHH
Confidence 9999999999999999999999999999999999964322 222222222221111 0111111223333 68999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 720 IKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 720 i~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+.+||+.+|++||++.|+++.+..+..
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHHHHH
Confidence 999999999999999999998876543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.7e-23 Score=215.23 Aligned_cols=245 Identities=18% Similarity=0.285 Sum_probs=183.0
Q ss_pred cccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
+.++.++|+|.|++||++... ..+.||+|.+...+.. .+...|++.|..+ -+.||+++.+++...+
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-------~ri~~El~~L~~~gG~~ni~~~~~~~rnnd-- 108 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-------SRILNELEMLYRLGGSDNIIKLNGCFRNND-- 108 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-------hHHHHHHHHHHHhccchhhhcchhhhccCC--
Confidence 367889999999999999853 4678999988765433 4688999999999 5999999999998877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCcc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWN 633 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~ 633 (772)
...+|+||+++-.-.+++. .++......+...+.+||+|+|..| ||||||||+|+|.+.. +.-.|.|||++.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHH
Confidence 7899999999988887763 4678888899999999999999999 9999999999999854 678899999753
Q ss_pred C-----------------------------------------------------CCCCCccccchhhh-ccCCCCCCCch
Q 004124 634 N-----------------------------------------------------TTAAKTGSAAMELL-ETSAVDLESNV 659 (772)
Q Consensus 634 ~-----------------------------------------------------~~~~~~~~~aPE~~-~~~~~s~ksDV 659 (772)
. ...|+.+|.|||++ ....-+++.||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 0 01133467789987 45567899999
Q ss_pred HHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-------------hhcCCCCcc---------------ccC-C-------
Q 004124 660 YSFGTILFEMITGRISYSIENGSLENWASEY-------------LKGEQPLKD---------------IVD-P------- 703 (772)
Q Consensus 660 wSfGvvL~ELltG~~P~~~~~~~~~~~~~~~-------------~~~~~~~~~---------------~~d-~------- 703 (772)
||.|||++-+++++.||.....+....+... +.+...+.+ -++ .
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999975443322211110 011100000 000 0
Q ss_pred ---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 ---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+..+..+++++.+|+..+|.+|.|++|.++.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0001112223468899999999999999999998753
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=190.81 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=186.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC-cccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK-NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp-NIV~l~g~~~~~~~~~~~LV 559 (772)
++...+|.|+||.||++... ..+++|.+....... ......|.+|+.++..+.|+ +|+++++++.... ..+++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~ 76 (384)
T COG0515 3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESK--SKEVERFLREIQILASLNHPPNIVKLYDFFQDEG--SLYLV 76 (384)
T ss_pred eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccc--hhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--EEEEE
Confidence 34567789999999999977 677888776544322 12457899999999999988 7999999996655 46999
Q ss_pred EeccCCCChhhhhhhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCC--
Q 004124 560 FEYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNT-- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~-~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~-- 635 (772)
+||+.++++.+++..... ..+.......+..+++.+++|+|+.+ ++|||+||+||+++... .++++|||.++..
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 999999999966642211 26888899999999999999999998 99999999999999988 7999999986522
Q ss_pred -------------CCCCccccchhhhcc---CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC--HHHHHHHHhhcCCC-
Q 004124 636 -------------TAAKTGSAAMELLET---SAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQP- 696 (772)
Q Consensus 636 -------------~~~~~~~~aPE~~~~---~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~--~~~~~~~~~~~~~~- 696 (772)
..++..|++||.... ..++...|+||+|++++++++|..||...... .............+
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 223456889999877 67889999999999999999999997644321 22222222222111
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......... .......+.+++..|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSN---PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccc---cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111111100 02233567889999999999999998887664
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-20 Score=201.49 Aligned_cols=139 Identities=15% Similarity=0.089 Sum_probs=106.8
Q ss_pred cccccccCccceEEEEEEEEc--CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~--~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+.+.+.+|+|+||+||+|+.. ++..+|||++.............+.|.+|+++|++++|+|||..+..+ + ..+
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~--~~~ 94 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G--KDG 94 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C--CcE
Confidence 366788899999999999865 467779987642211001123456799999999999999999633221 2 458
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCC-CCCCeEECCCCcEEEccccCccC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL-QSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDL-Kp~NILld~~~~~kLsDFGla~~ 634 (772)
+||||+++++|... . ... ...++.++++||+|||+.+ |+|||| ||+|||++.++.+||+|||+++.
T Consensus 95 LVmE~~~G~~L~~~-~--~~~------~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 95 LVRGWTEGVPLHLA-R--PHG------DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred EEEEccCCCCHHHh-C--ccc------hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 99999999999632 1 111 1467889999999999988 999999 99999999999999999999873
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-20 Score=204.48 Aligned_cols=208 Identities=25% Similarity=0.398 Sum_probs=162.3
Q ss_pred HhcCCCCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 533 L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
|+.+.|.|+.+++|.+.++. ..++|.+||..|+|.+.+.. ....++|.....+..+|+.||+|+|... -..|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--EMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCC--ceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeec
Confidence 45789999999999999885 67999999999999999964 4567999999999999999999999754 23999999
Q ss_pred CCCeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccC-------CCCCCCchHHHHHHHHHHHcCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETS-------AVDLESNVYSFGTILFEMITGRI 674 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~-------~~s~ksDVwSfGvvL~ELltG~~ 674 (772)
++|+++|..+.+||+|||+...... ...-|.|||.+... ..+.++||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999999999999999998765431 01246799988543 24678999999999999999999
Q ss_pred cccCCCC--CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 675 SYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 675 P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
||+.... +..+.+..+..+. ...+.|.+.... +..+++..++.+||..+|++||++++|-..++.+....
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~---~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGG---SNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccccCChHHHHHHHHhcC---CCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 9985332 2234444433311 112223332222 44557899999999999999999999999888776643
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.7e-19 Score=189.92 Aligned_cols=263 Identities=17% Similarity=0.206 Sum_probs=187.1
Q ss_pred cccccccCccceEEEEEEEEcCC--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC----CcccceeEEEE-cCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSG--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH----KNFVNLIGYCE-EDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H----pNIV~l~g~~~-~~~ 552 (772)
+.+.+.+|+|+||.||++..... ..+|+|......... ...+..|+.++..+.+ +++..+++... ...
T Consensus 20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~-----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK-----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC-----CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 36788999999999999996654 467777655432111 1157778888888863 57888888774 444
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-----CcEEEc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-----YAAKIS 627 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-----~~~kLs 627 (772)
..++||+.+ +.+|.++......+.++....++|+.|+..+|+++|+.+ ++||||||+|+++... ..+.|.
T Consensus 95 --~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 95 --FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred --eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEE
Confidence 579999988 779999875444578999999999999999999999999 9999999999999754 468999
Q ss_pred cccCcc--CC-----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHH
Q 004124 628 DFSFWN--NT-----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWA 687 (772)
Q Consensus 628 DFGla~--~~-----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~ 687 (772)
|||+++ .. ..++..|+++....+...+.+.|+||++.++.|+..|..||........ .-+
T Consensus 170 DfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~ 249 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF 249 (322)
T ss_pred ecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH
Confidence 999997 21 0134456777777888889999999999999999999999964332111 111
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
...... ..... .....+.++.++...+-..+..++|....+...+++....... ....|..|+..
T Consensus 250 ~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~---~~~~~~dw~~~ 314 (322)
T KOG1164|consen 250 EKDPRK-----LLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGS---KEDSPFDWEVK 314 (322)
T ss_pred HHHhhh-----hcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCC---CCCCCCccccc
Confidence 111110 01110 1112234555555556668999999999999998877665421 22356667654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-19 Score=178.53 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=110.0
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhh---------------------hhHHHHHHHHHHHHhcCCCCcc
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS---------------------KNLESQFRKKIDTLSKVNHKNF 541 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~---------------------~~~~~~f~~Ei~~L~~l~HpNI 541 (772)
.+.+|+|+||.||+|...+|+.||||+++........ .........|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5778999999999999888999999998754211100 0011233459999999988887
Q ss_pred cceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEECC
Q 004124 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 542 V~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILld~ 620 (772)
.....+... ..+|||||++++++..... ....+++....+++.|++.+|+|+ |+.+ |+||||||+|||++
T Consensus 82 ~~p~~~~~~----~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK----SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec----CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEE-
Confidence 554443322 2389999999887765432 234688899999999999999999 6888 99999999999998
Q ss_pred CCcEEEccccCccCC
Q 004124 621 DYAAKISDFSFWNNT 635 (772)
Q Consensus 621 ~~~~kLsDFGla~~~ 635 (772)
++.++|+|||++...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-20 Score=214.75 Aligned_cols=247 Identities=18% Similarity=0.217 Sum_probs=175.1
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecc-cchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~-~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+.+|.|++|.|+..+.. .....+.|....+. ..+........+..|+.+-.+++|+|++..+..+.+... ..-+|
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~--~~~~m 400 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG--ILQSM 400 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc--chhhh
Confidence 445677888877776633 23334444332110 111112222337788888899999999988887776552 34449
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC------
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN------ 634 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~------ 634 (772)
|||++ +|+.++.. ...+....+-.+..|+..|++|+|+.+ |.|||+|++|+++..++.+||+|||.+..
T Consensus 401 E~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 99999 99999853 245777888899999999999999999 99999999999999999999999997531
Q ss_pred -------CCCCCccccchhhhccCCCCC-CCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 635 -------TTAAKTGSAAMELLETSAVDL-ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 -------~~~~~~~~~aPE~~~~~~~s~-ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
...+...|.|||.+....|++ ..||||.||++..|++|+.||.........+... .... ..-+.....
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~--~~~~--~~~~~~~~~ 551 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN--NYSD--QRNIFEGPN 551 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh--cccc--ccccccChH
Confidence 223566899999999999885 5899999999999999999997443332221000 0000 001111111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.+...+|.++++.+|.+|-|+++|++.
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 2234456678889999999999999999999863
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-19 Score=219.51 Aligned_cols=154 Identities=29% Similarity=0.512 Sum_probs=117.2
Q ss_pred ChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeC-CCcEEEEEecCCCCcccCchhhcCCCCCCEEE
Q 004124 121 LNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSII 199 (772)
Q Consensus 121 ~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~ 199 (772)
.++|+.+|++||+.+. +|.+.+.+|+.. .+||.|.||+|+ .++|+.|+|++++++|.+++.+..+++|+.|+
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~~------~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNSS------ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCCC------CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 4589999999999984 677778999643 479999999997 47999999999999999999999999999999
Q ss_pred cccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 200 LRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 200 L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
|++|.++|.+|..+. .+++|++|||++|+++|.+|. +.+++|++|+|++|.++|.+|..++++++|++|+|++|.++
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccc
Confidence 999999999998776 788888888888877776664 33455555555555555555555555555555555555555
Q ss_pred Ccccc
Q 004124 279 NAASR 283 (772)
Q Consensus 279 g~~p~ 283 (772)
+.+|.
T Consensus 178 ~~~p~ 182 (968)
T PLN00113 178 GKIPN 182 (968)
T ss_pred ccCCh
Confidence 54443
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.7e-19 Score=175.14 Aligned_cols=146 Identities=16% Similarity=0.102 Sum_probs=112.6
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccch---------------------hhhhHHHHHHHHHHHHhcCCCCc
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---------------------WSKNLESQFRKKIDTLSKVNHKN 540 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~---------------------~~~~~~~~f~~Ei~~L~~l~HpN 540 (772)
+.+.+|+|+||.||+|+..+|+.||||+........ ........+..|.+.+.+++|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 357789999999999998789999999987642110 00111233568999999999999
Q ss_pred ccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEEC
Q 004124 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 541 IV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld 619 (772)
|.....+.... .+|||||++++++..... ....++.....+++.+++.++.|+|+ .+ |+||||||+|||++
T Consensus 81 i~~p~~~~~~~----~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~ 152 (190)
T cd05145 81 VPVPEPILLKK----NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH 152 (190)
T ss_pred CCCceEEEecC----CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE
Confidence 86655554432 389999999886543321 22356778889999999999999998 88 99999999999999
Q ss_pred CCCcEEEccccCccCCC
Q 004124 620 EDYAAKISDFSFWNNTT 636 (772)
Q Consensus 620 ~~~~~kLsDFGla~~~~ 636 (772)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 8899999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-19 Score=178.22 Aligned_cols=177 Identities=13% Similarity=0.102 Sum_probs=132.2
Q ss_pred HhhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHH------HHHHHHHHHhcCCCCcccceeEEE
Q 004124 475 ACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLES------QFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~------~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
..++-++++..+|.|+||.||.... ++..+++|.+....... +.... .|.+|++.+.+++|++|..+.+++
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~--~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT--ERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCch--HHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 3344457888999999999999766 56789999886544322 11112 268999999999999999999986
Q ss_pred EcCC------CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 549 EEDE------PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 549 ~~~~------~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
.... ....+|||||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+||++++++
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCCC
Confidence 5432 114689999999999977631 222 24568999999999998 99999999999999988
Q ss_pred cEEEccccCccCCCCCCccccchh-hhccCCCCCCCchHHHHHHHHHHHc
Q 004124 623 AAKISDFSFWNNTTAAKTGSAAME-LLETSAVDLESNVYSFGTILFEMIT 671 (772)
Q Consensus 623 ~~kLsDFGla~~~~~~~~~~~aPE-~~~~~~~s~ksDVwSfGvvL~ELlt 671 (772)
++|+|||..+..... .|.+ ......|..++||||||+++.-...
T Consensus 173 -i~liDfg~~~~~~e~----~a~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 173 -LRIIDLSGKRCTAQR----KAKDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred -EEEEECCCcccccch----hhHHHHHHHhHhcccccccceeEeehHHHH
Confidence 999999986544221 1112 3344567789999999999876543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=161.44 Aligned_cols=270 Identities=14% Similarity=0.195 Sum_probs=186.8
Q ss_pred cccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC-CcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l~g~~~~~~~~~~~ 557 (772)
+.++.++|.|+||.+|.|. ..+|.+||+|.-..+... .++..|.++.+.++| ..|-.++.|..+.. +-.
T Consensus 17 y~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-------pqL~yEskvY~iL~~g~GiP~i~~y~~e~~--ynv 87 (341)
T KOG1163|consen 17 YKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-------PQLLYESKVYRILQGGVGIPHIRHYGTEKD--YNV 87 (341)
T ss_pred eEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-------cchhHHHHHHHHhccCCCCchhhhhccccc--cce
Confidence 5789999999999999998 678999999986544322 357788888888876 45666666666655 568
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla~~ 634 (772)
+|||.. +.+|.++..- ..+.++..+.+-++-|+..-++|+|.++ +|||||||+|+|..-+ ..+.++|||+++.
T Consensus 88 lVMdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred eeeecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccchhh
Confidence 999998 7799888743 3456888999999999999999999988 9999999999999643 4688999999874
Q ss_pred CCC----------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 635 TTA----------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 635 ~~~----------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
... ++..|++.....+..-+.+-|+=|+|.+|...--|..||.+-.........+...+
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E----- 238 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE----- 238 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH-----
Confidence 332 22234443333444556788999999999999999999974332222111111111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhhhcc
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEILSSE 770 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~~~~ 770 (772)
.-....+.......+.|+...+.-|-..--++-|.-.-+.+.+.-+.....- .-.--.+|+-+...+++
T Consensus 239 kK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~---~~d~iyDW~~lkqk~~q 307 (341)
T KOG1163|consen 239 KKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNH---QYDYIYDWTMLKQKSQQ 307 (341)
T ss_pred hhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccc---cCCeEeeHHHHHHHhhc
Confidence 0111112223345567788888888888888888877666655544332111 11123466766655443
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-18 Score=199.83 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=167.5
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
..+.+|.+.|=+|.||+.+.|. |+||++.++...- .-...++-.+|++ ...++|||.+.+.-+-..+. ..|||=+
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~-sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k--AAylvRq 101 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTI-SLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK--AAYLVRQ 101 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCC-CchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH--HHHHHHH
Confidence 3567889999999999998887 8888887654221 1111223334444 55569999999877755554 4588889
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-------
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN------- 634 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~------- 634 (772)
|..+ +|++.+. .+.-+...+..=|+.|+..|+.-+|..+ |+|||||.+||||..-.-+.|+||.-.+.
T Consensus 102 yvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9965 8998884 3344666677779999999999999999 99999999999999988899999974331
Q ss_pred ---------CCCCCccccchhhhcc-----------CCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004124 635 ---------TTAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 635 ---------~~~~~~~~~aPE~~~~-----------~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
+....+.|.|||.+.. ...+++.||||.||++.||++ |+++|. +.+... +..+
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-----LSQL~a-Yr~~ 250 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-----LSQLLA-YRSG 250 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----HHHHHh-Hhcc
Confidence 1223346889998632 126788999999999999998 788884 222211 1111
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.+ +... ....+..++..|++.||++|-++++.++.
T Consensus 251 ~~~~~e~~---Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 NADDPEQL---LEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CccCHHHH---HHhC---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 11000000 0000 01257789999999999999999999986
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=194.21 Aligned_cols=149 Identities=29% Similarity=0.478 Sum_probs=130.0
Q ss_pred CChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCC-----ceeeEEeCC------CcEEEEEecCCCCcccCchh
Q 004124 120 CLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPC-----SWFGVECSD------GKVVILNLRDLCLGGMLAPE 188 (772)
Q Consensus 120 ~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C-----~w~Gv~C~~------~~v~~l~L~~~~l~G~ip~~ 188 (772)
....|..||+.+|+.+. ++. ..+|++ +|| .|.||.|.. ..|+.|+|++++|.|.+|+.
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~--~~~W~g--------~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~ 437 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPL--RFGWNG--------DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPND 437 (623)
T ss_pred cCchHHHHHHHHHHhcC-Ccc--cCCCCC--------CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHH
Confidence 45679999999999884 332 247853 344 799999952 14899999999999999999
Q ss_pred hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCC-CCC
Q 004124 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVL-KVI 267 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l-~~L 267 (772)
++.|++|+.|+|++|.|.|.+|..++.+++|+.|||++|+|+|.+|..++++++|+.|+|++|+|+|.+|..++.+ .++
T Consensus 438 i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~ 517 (623)
T PLN03150 438 ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHR 517 (623)
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998764 467
Q ss_pred CEEEcCCCCCCC
Q 004124 268 SEIQVDESWLTN 279 (772)
Q Consensus 268 ~~l~l~~N~l~g 279 (772)
..+++++|....
T Consensus 518 ~~l~~~~N~~lc 529 (623)
T PLN03150 518 ASFNFTDNAGLC 529 (623)
T ss_pred ceEEecCCcccc
Confidence 788888886543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-18 Score=189.60 Aligned_cols=221 Identities=19% Similarity=0.284 Sum_probs=170.0
Q ss_pred cCccceEEEEEEE----EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEEE
Q 004124 486 FSDGTVGTVYKGT----LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 486 lg~G~fG~Vykg~----~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+|+|.||.|+.++ .+.+..++.|..+++........ ....|..++..++ ||.+|++.-.+..+. ..++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~---~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT---HTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc---ccccHHHHHhhccCCCceeeeeeeecccc--chhHhh
Confidence 5788999988764 33456667776655443322111 3456677888886 999999988887766 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~----- 635 (772)
+|..+|+|...+. ....++......+...++-|++++|+.+ |+|||+|++||+++.+|.+|+.|||+.+..
T Consensus 77 d~~rgg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 77 DFLRGGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred hhcccchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 9999999988774 3455666677777888999999999998 999999999999999999999999987643
Q ss_pred CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHH
Q 004124 636 TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEE 715 (772)
Q Consensus 636 ~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 715 (772)
..++..|||||++. .....+|.||||++++||+||..||.. +.+..+++.+. .++.+....
T Consensus 153 ~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~~~~Il~~~~-----------~~p~~l~~~ 213 (612)
T KOG0603|consen 153 ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DTMKRILKAEL-----------EMPRELSAE 213 (612)
T ss_pred cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HHHHHHhhhcc-----------CCchhhhHH
Confidence 34577899999987 567899999999999999999999953 33344443222 134566677
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 004124 716 LLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 716 l~~Li~~Cl~~dP~~RPs~ 734 (772)
+.+++......+|..|--.
T Consensus 214 a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 214 ARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHhhCHHHHhcc
Confidence 7788888889999999654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.9e-17 Score=168.27 Aligned_cols=226 Identities=16% Similarity=0.287 Sum_probs=145.5
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC----------CcccceeEEEE-c
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH----------KNFVNLIGYCE-E 550 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H----------pNIV~l~g~~~-~ 550 (772)
.+.+|.|+++.||.++.. ++++++||+..... +......+++.+|.-....+.+ -.++--++... .
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~--~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA--DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS--TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc--ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 356678999999999975 58899999987766 2334456778888766665433 12222223222 1
Q ss_pred CC-----------Cc---eEEEEEeccCCCChhhhhhh---hcc--CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCC
Q 004124 551 DE-----------PF---TRMMVFEYSPNGSLFEHLHI---QEA--EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL 611 (772)
Q Consensus 551 ~~-----------~~---~~~LV~Ey~~~GsL~~~L~~---~~~--~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDL 611 (772)
+. .+ ..+++|+-+ .+||.+++.. ... ..+....++.+..|+.+.+++||..+ +||+||
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVHgdi 171 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--LVHGDI 171 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEST-
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc--eEeccc
Confidence 10 01 236788877 5688877542 111 22445667888899999999999999 999999
Q ss_pred CCCCeEECCCCcEEEccccCccCC------CCCCccccchhhhcc--------CCCCCCCchHHHHHHHHHHHcCCCccc
Q 004124 612 QSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELLET--------SAVDLESNVYSFGTILFEMITGRISYS 677 (772)
Q Consensus 612 Kp~NILld~~~~~kLsDFGla~~~------~~~~~~~~aPE~~~~--------~~~s~ksDVwSfGvvL~ELltG~~P~~ 677 (772)
||+|++++.+|.++|+||+..... ......+.+||.... -.++.+.|.|++|+++|.|.+|+.||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999854321 222345778887533 357889999999999999999999996
Q ss_pred CCCCCHHHHHHHHhhcCCCCccccC-CccccccHHHHHHHHHHHHHcccCCCCCC
Q 004124 678 IENGSLENWASEYLKGEQPLKDIVD-PTLKSFQENVLEELLVVIKNCVHPDPKQR 731 (772)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R 731 (772)
..... ..+ ....... +.++.+..||...++.+|++|
T Consensus 252 ~~~~~-----------------~~~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPE-----------------ADPEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGG-----------------STSGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCcc-----------------ccccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 32210 000 1233333 778899999999999999988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9e-17 Score=162.40 Aligned_cols=135 Identities=10% Similarity=0.096 Sum_probs=100.9
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-----CCCcccceeEEEEcCCC-ce-E
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-----NHKNFVNLIGYCEEDEP-FT-R 556 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-----~HpNIV~l~g~~~~~~~-~~-~ 556 (772)
..+|+|+||.||. .......+||++..... ...+.+.+|+++++++ +||||++++|++.++.. .. .
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~-----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD-----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEecccc-----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 4678899999996 33333346777754321 1245789999999999 57999999999987632 12 3
Q ss_pred EEEEec--cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHH-HHHhcCCCCeEeeCCCCCCeEECC----CCcEEEccc
Q 004124 557 MMVFEY--SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL-EHMHQLTPPIAHRNLQSSSIYLTE----DYAAKISDF 629 (772)
Q Consensus 557 ~LV~Ey--~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL-~yLH~~~~~IvHrDLKp~NILld~----~~~~kLsDF 629 (772)
.+|+|| +++|+|.+++.. ..+++. ..++.+++.++ +|||+.+ |+||||||+|||++. +..++|+||
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 378999 668999999953 235554 35677778777 9999998 999999999999974 348999995
Q ss_pred cCc
Q 004124 630 SFW 632 (772)
Q Consensus 630 Gla 632 (772)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 543
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-16 Score=157.14 Aligned_cols=175 Identities=13% Similarity=0.172 Sum_probs=123.9
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhh-hHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~-~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
...++.|+||+||.+.. .+..++.+.+..... +.. .....|.+|+++|+++. |++|.+++++ + ..+++|
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~--~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--~~~lvm 77 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPW--WLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--GRHLDR 77 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchh--hhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c--CEEEEE
Confidence 34567899999997765 566666555543221 111 12235889999999995 5889999886 2 358999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCC-CCCCeEECCCCcEEEccccCccCCCCCC
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL-QSSSIYLTEDYAAKISDFSFWNNTTAAK 639 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDL-Kp~NILld~~~~~kLsDFGla~~~~~~~ 639 (772)
||+.+.+|...+.. ....+..+++++|+++|+.+ |+|||| ||+|||++.++.++|+|||++.......
T Consensus 78 eyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 78 SYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 99999888654311 11357789999999999998 999999 7999999999999999999987433221
Q ss_pred c-----cc------------cchhhhc---cC---CCC-CCCchHHHHHHHHHHHcCCCccc
Q 004124 640 T-----GS------------AAMELLE---TS---AVD-LESNVYSFGTILFEMITGRISYS 677 (772)
Q Consensus 640 ~-----~~------------~aPE~~~---~~---~~s-~ksDVwSfGvvL~ELltG~~P~~ 677 (772)
. .+ .+||.+. .. ..+ ...+.++-|.-+|.++|++.+..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 1 00 1232221 11 122 34577899999999999988764
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=166.98 Aligned_cols=170 Identities=19% Similarity=0.237 Sum_probs=122.7
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE--CCCC--cEEEcccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL--TEDY--AAKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl--d~~~--~~kLsDFG 630 (772)
..|+||.-++. +|.+|+.. ...+...+.-|..|+.+|+.|||.++ |.|||+|++|||+ |+|. ...|+|||
T Consensus 317 tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred eEEEehhcchh-hHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccc
Confidence 46889988754 89888853 33556667778899999999999999 9999999999998 4554 46799999
Q ss_pred CccC--C-------------CCCCccccchhhhccCC------CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHH
Q 004124 631 FWNN--T-------------TAAKTGSAAMELLETSA------VDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689 (772)
Q Consensus 631 la~~--~-------------~~~~~~~~aPE~~~~~~------~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~ 689 (772)
.+-- . ..+....||||+..... --.|+|.|+.|-+.||+++...||...+.-..+.
T Consensus 391 CcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~--- 467 (598)
T KOG4158|consen 391 CCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT--- 467 (598)
T ss_pred eeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech---
Confidence 6421 1 11223458999874321 1268999999999999999999997533211110
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...-+..++..++.++..+.+++...++.||++|++..-....|
T Consensus 468 --------r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 468 --------RTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred --------hhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 01112234445566777888999999999999999877665554
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.8e-16 Score=157.46 Aligned_cols=248 Identities=14% Similarity=0.208 Sum_probs=175.8
Q ss_pred ccccccCccceEEEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++-.+||+|.||..+.|+ +-+++.||+|.-..++.. -++..|.+..+.| .-+.|-.+|-+-.++. +-.|
T Consensus 31 rVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A-------PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~--~NiL 101 (449)
T KOG1165|consen 31 RVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA-------PQLRDEYRTYKLLGGTEGIPQVYYFGQEGK--YNIL 101 (449)
T ss_pred eeccccccCcceeeecccccccCceEEEEeccccCCc-------chHHHHHHHHHHHcCCCCCCceeeeccccc--hhhh
Confidence 566789999999999998 567899999977655533 2566677777776 4578888776665554 5689
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-----CcEEEccccCcc
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-----YAAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-----~~~kLsDFGla~ 633 (772)
|+|.. +-+|.++.. -..+.++......||.|+..-++|+|++. +|.|||||+|+||..- ..+.|.|||+|+
T Consensus 102 VidLL-GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhh-CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 99998 779988764 45677999999999999999999999998 9999999999999643 458999999997
Q ss_pred CCCC----------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 634 NTTA----------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 634 ~~~~----------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
.... ++..||+.-.-.+..-+.+-|.=|+|-++...+-|..||.+-...-.+...+-+ ++..-
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI-Ge~Kr 256 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI-GETKR 256 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh-ccccc
Confidence 5432 344566665556777788999999999999999999999743322111111111 11100
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...+....+..++++..-+.-.=..+-.+-|..+-+...+.++..
T Consensus 257 ----~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 257 ----STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred ----cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 011223334455566555554444566777887766666555433
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-16 Score=158.75 Aligned_cols=139 Identities=16% Similarity=0.229 Sum_probs=111.4
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
..+|+|++|.||+|.. .+..+++|+...+.... ........+.+|++++..++|++|.....++...+ ..++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEEE
Confidence 4578999999999987 56778888765432211 01122356889999999999999988877776655 458999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
||+++++|.+++... .+ .+..++.+++.+|.++|+.+ ++|||++|+|||++ ++.++|+|||.++.
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999987421 22 77899999999999999988 99999999999999 78999999998654
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.3e-16 Score=154.50 Aligned_cols=134 Identities=17% Similarity=0.283 Sum_probs=104.7
Q ss_pred cCccceEEEEEEEEcCCcEEEEEEeeecccch--h-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 486 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD--W-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 486 lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~--~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
+|+|+||.||+|.+ ++..+++|....+.... . .....+++.+|++++..++|+++.....++...+ ..++||||
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~e~ 78 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVMEY 78 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEEEE
Confidence 67899999999995 46788888765432111 0 1122367889999999999987666555555444 45899999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+++++|.+++..... .++.+++.+|.++|+.+ ++|||+||+||+++ ++.+++.|||+++.
T Consensus 79 ~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999988742110 78999999999999988 99999999999999 88999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=157.60 Aligned_cols=146 Identities=18% Similarity=0.126 Sum_probs=108.9
Q ss_pred cccccccCccceEEEEEEE--EcCCcEEEEEEeeecccch-------------------hhhhHHHHHHHHHHHHhcCCC
Q 004124 480 SNIIGSFSDGTVGTVYKGT--LSSGVEIAVTSTSVKSRAD-------------------WSKNLESQFRKKIDTLSKVNH 538 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~--~~~~~~vaVK~~~~~~~~~-------------------~~~~~~~~f~~Ei~~L~~l~H 538 (772)
+.+...+|+|+||.||+|. ..+|..||+|.+....... ........+..|++.+.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999999999998 5689999999887542110 011122346789999999976
Q ss_pred Cc--ccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004124 539 KN--FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616 (772)
Q Consensus 539 pN--IV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 616 (772)
.. +.+++++ . ..++||||+++++|...... ...+.......++.|++.+++|||+.+ .|+||||||+||
T Consensus 110 ~~i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NI 180 (237)
T smart00090 110 AGVPVPKPIAW---R---RNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNI 180 (237)
T ss_pred cCCCCCeeeEe---c---CceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhE
Confidence 33 3333332 2 23799999999888765421 233455566789999999999999865 499999999999
Q ss_pred EECCCCcEEEccccCccCC
Q 004124 617 YLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 617 Lld~~~~~kLsDFGla~~~ 635 (772)
+++ ++.++|+|||.+...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999987643
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=177.13 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=108.1
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
....+|+|+||+||+|.+.... +++|+...+.... ......+++.+|++++.+++|++++..+.++...+ ..++
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~l 413 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--EKTI 413 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--CCEE
Confidence 3567889999999999876543 4444332221111 01123457899999999999999998887777655 4589
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
||||+++++|.+++. .+..++.+++++|.|||+.+ |+||||||+|||+ +++.++|+|||+++..
T Consensus 414 v~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 414 VMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999998874 35678999999999999988 9999999999999 6789999999997653
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-15 Score=152.58 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=107.0
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccc-----------------hhhhhHHHHHHHHHHHHhcCCCCc--
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-----------------DWSKNLESQFRKKIDTLSKVNHKN-- 540 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~-----------------~~~~~~~~~f~~Ei~~L~~l~HpN-- 540 (772)
+.+...+|.|+||.||+|...+|+.++||++...... .........+..|+.++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4556778899999999999888999999986543210 000111234778999999998874
Q ss_pred ccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 541 IV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
+.+.++. . ..++||||+++++|...... .....++.+++.++.++|+.+ |+||||||+||++++
T Consensus 97 v~~~~~~----~--~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~ 160 (198)
T cd05144 97 VPKPIDW----N--RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDD 160 (198)
T ss_pred CCceeec----C--CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcC
Confidence 4444432 2 34899999999999765420 234578899999999999987 999999999999999
Q ss_pred CCcEEEccccCccCCC
Q 004124 621 DYAAKISDFSFWNNTT 636 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~ 636 (772)
++.++|+|||++....
T Consensus 161 ~~~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcEEEEECCccccCC
Confidence 9999999999885543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.4e-15 Score=175.32 Aligned_cols=180 Identities=18% Similarity=0.318 Sum_probs=139.0
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC---CCcccceeEEEEcCCCceEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~~~~~~~~ 557 (772)
.|-+.+|+|+||+||+|...+|+.||+|+-+... .|. |.--.+++.+|+ -+-|+.+...+...+ .-+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~--~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~S~ 770 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN--PWE------FYICLQVMERLKPQMLPSIMHISSAHVFQN--ASV 770 (974)
T ss_pred EEEeeeccccceEEEEeecCCCcEEEEEeecCCC--cee------eeehHHHHHhhchhhhcchHHHHHHHccCC--cce
Confidence 6778899999999999998889999999865433 222 222223344443 233445554444444 348
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------CCcEEEcccc
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-------DYAAKISDFS 630 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-------~~~~kLsDFG 630 (772)
||+||.+.|+|.+++. ..+.++|.....+..|+++-+++||.++ |||+||||+|+||.. ..-++|+|||
T Consensus 771 lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccceEEEecc
Confidence 9999999999999985 5677999999999999999999999999 999999999999942 3458999999
Q ss_pred CccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCC
Q 004124 631 FWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRI 674 (772)
Q Consensus 631 la~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~ 674 (772)
.+-.+.. .+...-.+|...++.++.+.|-|.+.-+++-|+.|+.
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 7643321 1223457888899999999999999999999999873
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.1e-15 Score=170.65 Aligned_cols=196 Identities=20% Similarity=0.290 Sum_probs=134.7
Q ss_pred cccccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+| +.|+.+..|+||.||..+++. .+.+|. ++.++. -+.+- ++.....|.
T Consensus 84 df-~~IklisngAygavylvrh~~trqrfa~-kiNkq~----------lilRn--ilt~a~npf---------------- 133 (1205)
T KOG0606|consen 84 DF-NTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN----------LILRN--ILTFAGNPF---------------- 133 (1205)
T ss_pred cc-ceeEeeccCCCCceeeeeccccccchhh-cccccc----------hhhhc--cccccCCcc----------------
Confidence 45 667888999999999998763 345665 333221 01110 222222222
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC--
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN-- 634 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~-- 634 (772)
.| ||-...++.- +.+.. +++.+++|||+.+ |+|||+||+|.+|..-|.+|++|||+.+.
T Consensus 134 -vv------gDc~tllk~~--g~lPv--------dmvla~Eylh~yg--ivhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 134 -VV------GDCATLLKNI--GPLPV--------DMVLAVEYLHSYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred -ee------chhhhhcccC--CCCcc--------hhhHHhHhhccCC--eecCCCCCCcceeeecccccccchhhhhhhh
Confidence 33 4444444321 22221 2277899999988 99999999999999999999999997541
Q ss_pred ----------------------CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004124 635 ----------------------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 635 ----------------------~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
-..++..|.|||++....|...+|+|++|+|+||.+.|+.||.++ ..++.+..++.
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd--tpeelfg~vis 272 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--TPEELFGQVIS 272 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC--CHHHHHhhhhh
Confidence 123566789999999999999999999999999999999999644 33444444444
Q ss_pred cCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCC
Q 004124 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732 (772)
Q Consensus 693 ~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP 732 (772)
+...+.+- .+....++.+++.+.++.+|.+|-
T Consensus 273 d~i~wpE~--------dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 273 DDIEWPEE--------DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhcccccc--------CcCCCHHHHHHHHHHHHhChHhhc
Confidence 32222221 233456788899999999999994
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-14 Score=140.67 Aligned_cols=142 Identities=13% Similarity=0.089 Sum_probs=97.0
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhh-------------------HHHHHHHHHHHHhcCCCCc--c
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKN-------------------LESQFRKKIDTLSKVNHKN--F 541 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~-------------------~~~~f~~Ei~~L~~l~HpN--I 541 (772)
.+.+|+|+||+||+|...+++.||||+............ .......|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 356789999999999988899999998764321110000 0011235666666665443 4
Q ss_pred cceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECC
Q 004124 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 542 V~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~ 620 (772)
.+.+++. ..++||||++++.+......... .. .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~~------~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDLN------RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEecC------CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-
Confidence 4444321 24899999999654322111100 11 4567899999999999998 77 99999999999999
Q ss_pred CCcEEEccccCccCCC
Q 004124 621 DYAAKISDFSFWNNTT 636 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~ 636 (772)
++.++|+|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999886543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-15 Score=162.39 Aligned_cols=163 Identities=20% Similarity=0.291 Sum_probs=122.1
Q ss_pred eEEEEEeccCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
+.++.|++|...+|.+||..+ .....+|...+.++.|++.|++| ++ .+|||+||.||....+..+||.|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccchhhhhhhhhhee
Confidence 468999999999999999643 35567889999999999999999 55 9999999999999999999999999854
Q ss_pred CC---------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 634 NT---------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 634 ~~---------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
.. ..++..||+||.+.+..|+.|+||||+|++|+|+++ -..++.. ....
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------------~~t~ 469 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------------IATL 469 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------------HHhh
Confidence 22 123457999999999999999999999999999997 2222210 0111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ev 737 (772)
.++-|..+++.....-++-+.|+.+++...|.+||++.++
T Consensus 470 ~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 470 TDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 2222222221111112334578899999999999965554
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-13 Score=131.22 Aligned_cols=133 Identities=17% Similarity=0.220 Sum_probs=108.5
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC--CcccceeEEEEcCCCceEEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+|.|.++.||++...+ ..+++|....... ...+.+|+..+..++| .++.+++++....+ ..+++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~--~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-------GADREREVAILQLLARKGLPVPKVLASGESDG--WSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--ccEEEE
Confidence 4667899999999999865 6788887654321 3568899999999976 58999988887654 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC-CCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT-PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~-~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
||++++.+..+ +......++.+++++++++|... .+++|||+||+||++++.+.+++.|||.++.
T Consensus 73 e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99998777543 55667788999999999999742 3599999999999999989999999998653
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=142.25 Aligned_cols=138 Identities=13% Similarity=0.077 Sum_probs=101.3
Q ss_pred ccceEEEEEEEEcCCcEEEEEEeeeccc-----c---hhhhhHHHHHHHHHHHHhcCCCCcc--cceeEEEEcCCC--ce
Q 004124 488 DGTVGTVYKGTLSSGVEIAVTSTSVKSR-----A---DWSKNLESQFRKKIDTLSKVNHKNF--VNLIGYCEEDEP--FT 555 (772)
Q Consensus 488 ~G~fG~Vykg~~~~~~~vaVK~~~~~~~-----~---~~~~~~~~~f~~Ei~~L~~l~HpNI--V~l~g~~~~~~~--~~ 555 (772)
.|+.|+||++... +..++||.+..... . .........+.+|++++.+++|++| ++.+++...... +.
T Consensus 42 ~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~ 120 (239)
T PRK01723 42 AKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYR 120 (239)
T ss_pred CCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCccee
Confidence 4555688888765 66788887753211 0 0112234578899999999998885 677776544322 12
Q ss_pred EEEEEeccCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 556 RMMVFEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 556 ~~LV~Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
.++||||+++ .+|.+++.. ..++.. .+.+++.++.+||+.+ |+||||||+|||++.++.++|+|||.+..
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDAG--VYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHCC--CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 3699999997 689888742 234433 3578999999999998 99999999999999989999999998765
Q ss_pred C
Q 004124 635 T 635 (772)
Q Consensus 635 ~ 635 (772)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5e-13 Score=137.01 Aligned_cols=193 Identities=22% Similarity=0.311 Sum_probs=136.6
Q ss_pred HHHhcCCCCcccceeEEEEcCC---CceEEEEEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004124 531 DTLSKVNHKNFVNLIGYCEEDE---PFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPP 605 (772)
Q Consensus 531 ~~L~~l~HpNIV~l~g~~~~~~---~~~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~ 605 (772)
.-|-.+.|-|||+++.|+.+.. .....++.|||..|++..+|++.. ...+....-.+++-||..||.|||++.|+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455667999999999987643 224688999999999999997542 34455566678999999999999999999
Q ss_pred eEeeCCCCCCeEECCCCcEEEccccCc-------------cCCCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcC
Q 004124 606 IAHRNLQSSSIYLTEDYAAKISDFSFW-------------NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITG 672 (772)
Q Consensus 606 IvHrDLKp~NILld~~~~~kLsDFGla-------------~~~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG 672 (772)
|+|+++..+-|++..++-+||+----. +....+..++.+||.-.....+.++|||+||+..+||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999999998632210 1122334577888887777778899999999999999987
Q ss_pred CCcccCCCCC--HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 673 RISYSIENGS--LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 673 ~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..--...... ..+-......+ .-+ ..-..++.+|++.+|..||+|++++..
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~------len-----------~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIG------LEN-----------GLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eeccCCCcceeehhhhhhhheee------ccC-----------ccccCcCcccccCCCCCCcchhhhhcC
Confidence 6432111100 00000000000 000 111346789999999999999998643
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.7e-12 Score=142.47 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=100.8
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhh-----------------------------h------HHHHHHH
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK-----------------------------N------LESQFRK 528 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~-----------------------------~------~~~~f~~ 528 (772)
..+|.|++|.||+|++++|+.||||+........... . .+-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 4588999999999999999999999975432111000 0 0113666
Q ss_pred HHHHHhcCC----CCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHH-HHHHHhcCC
Q 004124 529 KIDTLSKVN----HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY-CLEHMHQLT 603 (772)
Q Consensus 529 Ei~~L~~l~----HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~-gL~yLH~~~ 603 (772)
|++.+.+++ |.+-|.+-.++.+-.. ..+|||||+++++|.++...... .. .+.+++..++. .+..+|..+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTS-ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcC-CceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 776666653 3333444444432211 35899999999999887643211 12 24456766666 467788887
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++|+|+||.||++++++++++.|||++....
T Consensus 278 --~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 --FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999976554
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-13 Score=158.25 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=171.7
Q ss_pred ccccccCccceEEEEEEEEcC--CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
++++.+|+|+|+.|-...... ...+++|.+.... ......+....|..+-..+. |+|++.+++...+.+ ..+
T Consensus 23 ~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~---~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~--~~~ 97 (601)
T KOG0590|consen 23 KLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP---KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR--SYL 97 (601)
T ss_pred cccccccccccchhhhhhhcCCCcceeeccCCCCCC---CccchhhhcCccccccccccccccccccCCccCCCc--ccc
Confidence 566778899999988877533 3445555554432 11222344556777777776 999999999988877 569
Q ss_pred EEEeccCCCChhhhh-hhhccCCCCHHHHHHHHHHHHHHHHHHh-cCCCCeEeeCCCCCCeEECCCC-cEEEccccCccC
Q 004124 558 MVFEYSPNGSLFEHL-HIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L-~~~~~~~l~~~~~~~Ia~~ia~gL~yLH-~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~ 634 (772)
+++||..+|++.+-+ +.. ....+......+..|+..++.|+| ..+ +.|||+||+|.+++..+ ..|++|||++..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cccCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999999999887 322 213444556678899999999999 777 99999999999999999 999999998753
Q ss_pred CC------------CC-CccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCH---HHHHHHHhhcCCCC
Q 004124 635 TT------------AA-KTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSL---ENWASEYLKGEQPL 697 (772)
Q Consensus 635 ~~------------~~-~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~---~~~~~~~~~~~~~~ 697 (772)
.. .+ ...|+|||...+. ...+..|+||.|+++.-+++|..|+....... ..|....
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~------- 247 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK------- 247 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-------
Confidence 32 23 5678999998774 44578999999999999999999986432211 1111100
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+..-............++..+++..+|..|.+.+++..
T Consensus 248 ----~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 ----GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ----cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00000111233456677888899899999999888754
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-12 Score=148.01 Aligned_cols=91 Identities=26% Similarity=0.420 Sum_probs=88.2
Q ss_pred CCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcC
Q 004124 194 ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVD 273 (772)
Q Consensus 194 ~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~ 273 (772)
.++.|+|++|.+.|.+|..++++++|+.|+|++|+|+|.+|..++++++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccc
Q 004124 274 ESWLTNAASRA 284 (772)
Q Consensus 274 ~N~l~g~~p~~ 284 (772)
+|.|+|.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999999874
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.4e-10 Score=113.44 Aligned_cols=129 Identities=14% Similarity=0.162 Sum_probs=92.9
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCccc-ceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV-NLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV-~l~g~~~~~~~~~~~LV~E 561 (772)
++.++.|.++.||+++.. +..+++|....... ....+.+|++++..+.+.+++ +++++.. . ..++|||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~--~~~lv~e 71 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE------LLINRENEAENSKLAAEAGIGPKLYYFDP--E--TGVLITE 71 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc------cccCHHHHHHHHHHHHHhCCCCceEEEeC--C--CCeEEEE
Confidence 345677889999999876 67788887643221 113467888999988665554 4444432 2 2379999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC---CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT---PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~---~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
|+++.++...- . ....++.+++++|+.||..+ ..++|+|++|.||+++ ++.+++.|||.+.
T Consensus 72 ~i~G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 72 FIEGSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ecCCCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 99998876430 0 11345678999999999875 2369999999999999 6689999999754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.9e-11 Score=134.73 Aligned_cols=145 Identities=12% Similarity=0.113 Sum_probs=90.4
Q ss_pred cccCccceEEEEEEEEcC-CcEEEEEEeeecccch-----------------------------hhhhHH------HHHH
Q 004124 484 GSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRAD-----------------------------WSKNLE------SQFR 527 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~-----------------------------~~~~~~------~~f~ 527 (772)
..+|.|++|.||+|++++ |+.||||+........ ..+... -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 578999999999999987 9999999986442110 000111 1255
Q ss_pred HHHHHHhcCC----CCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHH-HHHHhcC
Q 004124 528 KKIDTLSKVN----HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC-LEHMHQL 602 (772)
Q Consensus 528 ~Ei~~L~~l~----HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~g-L~yLH~~ 602 (772)
+|+..+.+++ +.+.|.+-.++.+-.. ..+|||||+.|+.+.++-... ....+. ..++...++. +.-++..
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st-~~VLvmE~i~G~~l~d~~~l~-~~g~d~---~~la~~~v~~~~~Qif~~ 279 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCS-ETVMVMERMYGIPVSDVAALR-AAGTDM---KLLAERGVEVFFTQVFRD 279 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCC-CceEEEeeecCccHHhHHHHH-hcCCCH---HHHHHHHHHHHHHHHHhC
Confidence 5655555553 4444554444443111 458999999999997752211 111221 1222222221 2222345
Q ss_pred CCCeEeeCCCCCCeEECCCC----cEEEccccCccCC
Q 004124 603 TPPIAHRNLQSSSIYLTEDY----AAKISDFSFWNNT 635 (772)
Q Consensus 603 ~~~IvHrDLKp~NILld~~~----~~kLsDFGla~~~ 635 (772)
+ ++|+|+||.||+++.++ .+++.|||+....
T Consensus 280 G--ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 280 G--FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred C--eeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 6 99999999999999888 9999999986544
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.6e-09 Score=104.64 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=97.3
Q ss_pred ccccCccceEEEEEEEEcC-------CcEEEEEEeeeccc-----chhh------------hhHHHHHH----HHHHHHh
Q 004124 483 IGSFSDGTVGTVYKGTLSS-------GVEIAVTSTSVKSR-----ADWS------------KNLESQFR----KKIDTLS 534 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~-------~~~vaVK~~~~~~~-----~~~~------------~~~~~~f~----~Ei~~L~ 534 (772)
.|.+|.|.-+.||.|...+ +..+|||+.+.... ..+. ....+.+. +|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4677888889999998553 47899998764311 1100 11123333 8999999
Q ss_pred cCCC--CcccceeEEEEcCCCceEEEEEeccCCCChhh-hhhhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeC
Q 004124 535 KVNH--KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE-HLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRN 610 (772)
Q Consensus 535 ~l~H--pNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~-~L~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrD 610 (772)
++.. -++-+.+++ . ..++||||+.++.+.. .+. ...++......+..+++.+|.++ |..+ |||+|
T Consensus 82 rl~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGD 150 (197)
T cd05146 82 RMQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN--LVHAD 150 (197)
T ss_pred HHHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC--eecCC
Confidence 9853 455566654 2 2489999997654422 221 12244445567789999999999 8888 99999
Q ss_pred CCCCCeEECCCCcEEEccccCccCC
Q 004124 611 LQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 611 LKp~NILld~~~~~kLsDFGla~~~ 635 (772)
|++.|||+++ +.+.|+|||.+-..
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999974 67999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.8e-10 Score=123.23 Aligned_cols=237 Identities=22% Similarity=0.281 Sum_probs=161.5
Q ss_pred ccccccCc--cceEEEEEEEE---cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSD--GTVGTVYKGTL---SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~--G~fG~Vykg~~---~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|. |.+|.||.+.. .++..+|+|+-+...... ....+=.+|+....++ .|+|.|+.+..+...+
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p---~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~-- 191 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP---LDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG-- 191 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc---cccccccchhhcccccCccccccccCcccccCC--
Confidence 44566778 99999999987 356778887743322211 1112224566666666 5999999888888777
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHH----HHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY----CLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDF 629 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~----gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDF 629 (772)
..++-+|++. .+|..+-+.. ...+.......+..+..+ |+.++|... |+|-|+||.||++..+ ...+++||
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred cceeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCc
Confidence 5688888884 6888876532 223444555566666677 999999988 9999999999999998 88999999
Q ss_pred cCccCCC--------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 630 SFWNNTT--------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 630 Gla~~~~--------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
|+..... .+...|++||... +.++.++|||++|.+..|..++........ ...|.
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~--~~~W~-------- 336 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGK--NSSWS-------- 336 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCC--CCCcc--------
Confidence 9754322 3445788999864 567899999999999999999877653221 01111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+.....+ .++.+....++...+..++..+|..|++++++..
T Consensus 337 ~~r~~~ip--~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 337 QLRQGYIP--LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccccccCc--hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111110 0122222344555888899999999998887654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-08 Score=104.55 Aligned_cols=144 Identities=15% Similarity=0.198 Sum_probs=105.6
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC--CcccceeEEEEcCCC-ceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEP-FTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~-~~~~LV~ 560 (772)
..++.|..+.||+++..+|..+++|........ .....+.+|++++..+++ .++.+++.+...... ...++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~----~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL----PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC----cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 356778899999999877778899876543211 123468899999999976 345777777665320 1348999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-------------------------------------- 602 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-------------------------------------- 602 (772)
||++++++.+.+.. ..++...+..++.+++++|.+||+.
T Consensus 80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99999888776521 3467777778888888888888842
Q ss_pred ----------------CCCeEeeCCCCCCeEECC--CCcEEEccccCccC
Q 004124 603 ----------------TPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNN 634 (772)
Q Consensus 603 ----------------~~~IvHrDLKp~NILld~--~~~~kLsDFGla~~ 634 (772)
...++|+|+++.||+++. ++.+.|.||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134799999999999998 66789999987543
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-10 Score=107.07 Aligned_cols=107 Identities=22% Similarity=0.390 Sum_probs=93.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
+.++.+.|+.|.++- +||.|..|.+|+.|++++|++. .+|..++++++|+.|+++-|++. .+|..+|+++.|++|||
T Consensus 33 s~ITrLtLSHNKl~~-vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTV-VPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCceee-cCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 568889999998875 7889999999999999999997 78999999999999999999998 68999999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCC
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
++|+++. .+|..+..+..|+.|+|+.|.|.
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe 140 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFE 140 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcc
Confidence 9999874 56777777777777888888776
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.9e-08 Score=113.36 Aligned_cols=157 Identities=15% Similarity=0.210 Sum_probs=113.2
Q ss_pred EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccC
Q 004124 499 LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 578 (772)
Q Consensus 499 ~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~ 578 (772)
..++..|.|...+.... .......+-++.|+.+|||||++++..+...+ ..|||+|-+. -|..++....
T Consensus 34 k~~~~~vsVF~~~~~~~-----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--~~ylvTErV~--Pl~~~lk~l~-- 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--TLYLVTERVR--PLETVLKELG-- 102 (690)
T ss_pred eccCCceEEEEEeCCCc-----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC--ceEEEeeccc--cHHHHHHHhH--
Confidence 45677777777655432 11234667788999999999999999988877 6899999884 5666664322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh-cCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCCc---------cccchhhh
Q 004124 579 HLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT---------GSAAMELL 648 (772)
Q Consensus 579 ~l~~~~~~~Ia~~ia~gL~yLH-~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~~~---------~~~aPE~~ 648 (772)
-....-.+.||+.||.||| +++ ++|++|.-+.|++++.|+.||++|-++........ .+..|+.+
T Consensus 103 ---~~~v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 103 ---KEEVCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI 177 (690)
T ss_pred ---HHHHHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence 2233346789999999997 577 99999999999999999999999987643322211 12233322
Q ss_pred ccCCCCCCCchHHHHHHHHHHHcCC
Q 004124 649 ETSAVDLESNVYSFGTILFEMITGR 673 (772)
Q Consensus 649 ~~~~~s~ksDVwSfGvvL~ELltG~ 673 (772)
... +...|.|-||++++|++.|.
T Consensus 178 ~~s--~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 178 DPS--EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred Ccc--ccchhhhhHHHHHHHHhCcc
Confidence 111 13459999999999999983
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-09 Score=121.01 Aligned_cols=244 Identities=20% Similarity=0.212 Sum_probs=164.7
Q ss_pred HhhcccccccccCccceEEEEEEEEc--CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 475 ACEDFSNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fG~Vykg~~~--~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
.+.+|. .+..+|.|.|+.||+...+ ++..+++|.......... ....-..|+-+...+ .|.++++++..+...
T Consensus 263 ~~~df~-~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~---~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 263 KLTDFG-LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFA---SDIFSLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ecCCcc-eeEEccCCccccceeeeecCCCCceEeChhhhccccchH---hhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence 344553 4567889999999998743 566777776554332211 111223455555555 588888887766555
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEcccc
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFS 630 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFG 630 (772)
+ ..++--||+.++++.... .....++...++++..+++.++.++|+.. ++|+|+||+||++..+ +.-+++|||
T Consensus 339 r--~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 339 R--QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred c--cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccc
Confidence 4 347889999999987665 23455777888899999999999999877 9999999999999876 888999999
Q ss_pred CccCCC------CCCcccc--chhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 631 FWNNTT------AAKTGSA--AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 631 la~~~~------~~~~~~~--aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.+.... .....++ +++......+-.+.|+||||..+.|.+++..--. . ...|. .+..
T Consensus 413 ~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~-~---~~~~~-----------~i~~ 477 (524)
T KOG0601|consen 413 CWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE-S---GVQSL-----------TIRS 477 (524)
T ss_pred cccccceecccccccccccccchhhccccccccccccccccccccccccCcccCc-c---cccce-----------eeec
Confidence 875321 1222333 4555567778899999999999999999864221 1 11111 1111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
......+ ....++..+.+.+...++..||.+.++....+..
T Consensus 478 ~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 478 GDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 1111111 2225666778888899999999998877654443
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.3e-08 Score=94.61 Aligned_cols=134 Identities=19% Similarity=0.247 Sum_probs=94.1
Q ss_pred cCccceEEEEEEEEcCCcEEEEEEeeecccch--h-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 486 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD--W-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 486 lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~--~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
+++|+-+.+|.+.+. |..+++|.-..|.... . ..-..++-.+|++++.+++--.|-..+=|..+.+ ...|+|||
T Consensus 4 i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~me~ 80 (204)
T COG3642 4 IKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIVMEY 80 (204)
T ss_pred hhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEEEEE
Confidence 456777899999775 3345555433332211 1 1122356778999999886554444443444444 45899999
Q ss_pred cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 563 SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 563 ~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+++-.|.+.+... +..++..+-+-+.-||..+ |||+||.++||++..+. +.+.|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888532 3567777778888899998 99999999999998765 99999999764
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.3e-08 Score=94.07 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=99.7
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEe-eecccchh--hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTST-SVKSRADW--SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~-~~~~~~~~--~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+-+|+-+.|+++.+. |+...||.- .++.+... .+-..++..+|++.|.+++--.|.-..=++.+.. .-.|+
T Consensus 12 l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--~~~i~ 88 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--GGQIY 88 (229)
T ss_pred ceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC--CCeEE
Confidence 445556777899999987 555555543 32222211 2234567889999999987555544444454444 34799
Q ss_pred EeccCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccC
Q 004124 560 FEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla~~ 634 (772)
|||+++ -++.+++.........-.....++..|-+.+.-||..+ |+|+||..+||+|..+ ..+.+.|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhc
Confidence 999965 37788876443322222333678888999999999988 9999999999999654 3468999998643
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-09 Score=125.80 Aligned_cols=261 Identities=19% Similarity=0.214 Sum_probs=161.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+++.+..|.++.++-++-. .|...+.+...+.... .....+....+-.++-..+||-+++..--+.... -.+||
T Consensus 807 ~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i--~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs--P~~L~ 882 (1205)
T KOG0606|consen 807 EITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKI--RTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS--PLPLV 882 (1205)
T ss_pred eecccccCCCCcccccCCccccccccchhhhccchhh--ccccccccCCccCccccCCCCceecccCCCCCCC--Ccchh
Confidence 56677888999988877532 2322222222111100 0111122233333333345666665543322223 24899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN----- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~----- 634 (772)
++|..+|+|...||... ..+..........+..+++|||... +.|||+||.|+|...++..+++|||....
T Consensus 883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch--hhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999999999987432 2333333344456677899999876 89999999999999999999999973210
Q ss_pred -----------------------------------CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC
Q 004124 635 -----------------------------------TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 635 -----------------------------------~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
...+++.|.+||...+......+|+|++|++++|.++|..||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 011233567899988888899999999999999999999999644
Q ss_pred CCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCc
Q 004124 680 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPL 759 (772)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~ 759 (772)
.. .+.+..+..+..+ ....+.....+..+++...+..+|.+|-.|.-- ......+.+.+.
T Consensus 1039 tp--q~~f~ni~~~~~~--------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~----------~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1039 TP--QQIFENILNRDIP--------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGA----------AEVKGHPFFQDV 1098 (1205)
T ss_pred ch--hhhhhccccCCCC--------CCCCccccChhhhhhhhhhhccCchhccCcccc----------cccccCCccCCC
Confidence 32 2222222222111 112234455677788888889999999765421 112334556677
Q ss_pred hHHHHhhhhc
Q 004124 760 WWAELEILSS 769 (772)
Q Consensus 760 ~~~~~~~~~~ 769 (772)
.|+-+....+
T Consensus 1099 ~~~~l~~q~~ 1108 (1205)
T KOG0606|consen 1099 DWENLALQKA 1108 (1205)
T ss_pred CccccccccC
Confidence 7776665543
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-07 Score=92.56 Aligned_cols=130 Identities=18% Similarity=0.230 Sum_probs=82.3
Q ss_pred EEEEEEEcCCcEEEEEEeeeccc---------------------chhhhhHHHHHHHHHHHHhcCCCC--cccceeEEEE
Q 004124 493 TVYKGTLSSGVEIAVTSTSVKSR---------------------ADWSKNLESQFRKKIDTLSKVNHK--NFVNLIGYCE 549 (772)
Q Consensus 493 ~Vykg~~~~~~~vaVK~~~~~~~---------------------~~~~~~~~~~f~~Ei~~L~~l~Hp--NIV~l~g~~~ 549 (772)
.||.|...+|..+|||....... ..+.........+|.+.|.++..- ++-+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998899999998764311 011122345578899999999766 455555442
Q ss_pred cCCCceEEEEEeccC--CCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 550 EDEPFTRMMVFEYSP--NGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 550 ~~~~~~~~LV~Ey~~--~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
. .+|||||++ +..+..+.. .. ++......+..++...+..+ |..+ |+|+|+.+.|||++++ .+.|
T Consensus 80 -~----~~ivME~I~~~G~~~~~l~~-~~---~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 -R----NVIVMEYIGEDGVPLPRLKD-VD---LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp -T----TEEEEE--EETTEEGGCHHH-CG---GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT-CEEE
T ss_pred -C----CEEEEEecCCCccchhhHHh-cc---ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc-eEEE
Confidence 2 279999998 544444322 11 11223455677777766665 7888 9999999999999988 9999
Q ss_pred ccccCccCC
Q 004124 627 SDFSFWNNT 635 (772)
Q Consensus 627 sDFGla~~~ 635 (772)
.|||.+...
T Consensus 148 IDf~qav~~ 156 (188)
T PF01163_consen 148 IDFGQAVDS 156 (188)
T ss_dssp --GTTEEET
T ss_pred EecCcceec
Confidence 999976543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.9e-09 Score=101.44 Aligned_cols=110 Identities=23% Similarity=0.428 Sum_probs=91.1
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~l 248 (772)
.+..++|.+|++. .+|.++..++.|+.|+++-|.+. .+|..+|+++.|++|||++|+++- .+|..+-.++.|+.|+|
T Consensus 57 nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl 134 (264)
T KOG0617|consen 57 NLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYL 134 (264)
T ss_pred hhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHh
Confidence 3556778777765 48999999999999999999997 689999999999999999999975 57777777888888899
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.|. -+|+.++++++|+.|.+..|.+- ++|.
T Consensus 135 ~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpk 167 (264)
T KOG0617|consen 135 GDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPK 167 (264)
T ss_pred cCCCcc-cCChhhhhhcceeEEeeccCchh-hCcH
Confidence 988875 57888888999998888888765 3444
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.63 E-value=5e-09 Score=115.39 Aligned_cols=110 Identities=15% Similarity=0.316 Sum_probs=75.1
Q ss_pred EEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 171 VVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 171 v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
|.++|+++|.++ +.+|.....++++++|.|....|. .+|.+++.|.+|++|.+++|++. .+-.+++.++.|+.+++.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 667788888887 456777777777777777776665 57777777777777777777765 233345566666666666
Q ss_pred cCCC-cccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQY-LGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~-~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.|++ +..||+.+..+.-|..||||+|.|. .+|.
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~ 120 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPT 120 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcch
Confidence 6666 3456666777777777777777666 3443
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.6e-08 Score=105.17 Aligned_cols=111 Identities=32% Similarity=0.430 Sum_probs=95.3
Q ss_pred cEEEEEecCCCC-----------------------cccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 170 KVVILNLRDLCL-----------------------GGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 170 ~v~~l~L~~~~l-----------------------~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
-|+.++++.|++ -+.+|..++.++.|..|+|++|-+. .+|.+++.+..|+.||+|+
T Consensus 389 ~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 389 IVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred ceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 388888888764 2567788999999999999998887 7999999999999999999
Q ss_pred CcCc----------------------ccCCcc-cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 227 NNFS----------------------GPFPSD-FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~----------------------G~iP~~-l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|+|. |.+|++ +.+|.+|..|||.+|.+ -.||+.++++.+|++|.+++|.|. .|+
T Consensus 468 NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdl-q~IPp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 468 NRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDL-QQIPPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred cccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCch-hhCChhhccccceeEEEecCCccC--CCH
Confidence 9874 345544 88899999999999986 479999999999999999999998 666
Q ss_pred c
Q 004124 284 A 284 (772)
Q Consensus 284 ~ 284 (772)
.
T Consensus 545 ~ 545 (565)
T KOG0472|consen 545 H 545 (565)
T ss_pred H
Confidence 4
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.4e-07 Score=94.16 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=95.2
Q ss_pred EEEEEEEcCCcEEEEEEeeecccchhhh------hHHHHHHHHHHHHhcCCCCc--ccceeEEEEcCC---CceEEEEEe
Q 004124 493 TVYKGTLSSGVEIAVTSTSVKSRADWSK------NLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDE---PFTRMMVFE 561 (772)
Q Consensus 493 ~Vykg~~~~~~~vaVK~~~~~~~~~~~~------~~~~~f~~Ei~~L~~l~HpN--IV~l~g~~~~~~---~~~~~LV~E 561 (772)
.|++..+ +|+.+.||...........+ .....+.+|.+.+.++...+ ....+++..... ....++|+|
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667766 46789999764332111000 01124778988888884333 344455554321 124689999
Q ss_pred ccCCC-ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------CCcEEEccccCcc
Q 004124 562 YSPNG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-------DYAAKISDFSFWN 633 (772)
Q Consensus 562 y~~~G-sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-------~~~~kLsDFGla~ 633 (772)
++++- +|.+++........+...+..++.+++..+.-||+.+ |+|+|++++|||++. +..+.++||+.+.
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99875 7888874322234455677789999999999999999 999999999999975 4789999999765
Q ss_pred C
Q 004124 634 N 634 (772)
Q Consensus 634 ~ 634 (772)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 3
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.3e-06 Score=93.95 Aligned_cols=167 Identities=17% Similarity=0.242 Sum_probs=121.4
Q ss_pred EEEEEE-EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceEEEEEeccCC-CCh
Q 004124 493 TVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTRMMVFEYSPN-GSL 568 (772)
Q Consensus 493 ~Vykg~-~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~~LV~Ey~~~-GsL 568 (772)
+.||+. ..+|..++.|++....... . ..-..-++.++++.|+|||++..++... +....++||+|.|+ ++|
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~--~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQS--T---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccC--c---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 789998 4578889888884322111 1 1223447889999999999999987632 22257999999986 677
Q ss_pred hhhhhhh-------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 569 FEHLHIQ-------------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 569 ~~~L~~~-------------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++.... .....++...+.++.|+..||.++|+.| +.-+-|.+++||++.+.+++|+..|.....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcceEEEecccceeee
Confidence 7664321 1234567788899999999999999988 888999999999999999999988876544
Q ss_pred CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCC
Q 004124 636 TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRI 674 (772)
Q Consensus 636 ~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~ 674 (772)
.... . |.++. -.+-|.=.||.+++.|.||..
T Consensus 444 ~~d~---~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDP---T--EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCC---C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 4332 0 11111 135688899999999999953
|
|
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.5e-08 Score=71.29 Aligned_cols=42 Identities=43% Similarity=0.963 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeC
Q 004124 122 NSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS 167 (772)
Q Consensus 122 ~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~ 167 (772)
++|+++|++||+++..+|.+.+.+|+.+. ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~----~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSS----DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT------S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcC----CCCCeeeccEEeC
Confidence 57999999999999767778899998642 2589999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-06 Score=86.35 Aligned_cols=143 Identities=10% Similarity=0.094 Sum_probs=101.6
Q ss_pred CccceEEEEEEEEcCCcEEEEEEeeecccchhh-hhHHHHHHHHHHHHhcCCCC--cccceeEEEE---cCCCceEEEEE
Q 004124 487 SDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS-KNLESQFRKKIDTLSKVNHK--NFVNLIGYCE---EDEPFTRMMVF 560 (772)
Q Consensus 487 g~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~-~~~~~~f~~Ei~~L~~l~Hp--NIV~l~g~~~---~~~~~~~~LV~ 560 (772)
|.||.+-|++-.+... .+.+|+-.......+. ...+..|.+|...|.++..- .+.+.. ++. .+..+..+||+
T Consensus 27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 3477778998776644 6888876532222222 33456799999999988532 233443 332 23334568999
Q ss_pred eccCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--EEEccccCcc
Q 004124 561 EYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFSFWN 633 (772)
Q Consensus 561 Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--~kLsDFGla~ 633 (772)
|-+++ -+|.+++....-...+...+..+..++++.+.-||+.+ +.|+|+-+.||+++.++. +++.||--++
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97753 58888875433345677778899999999999999999 999999999999986666 9999997543
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.8e-08 Score=108.67 Aligned_cols=107 Identities=21% Similarity=0.345 Sum_probs=94.3
Q ss_pred cEEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEEE
Q 004124 170 KVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L~ 247 (772)
++.++.++.|+|- ..||+.|..|..|+.||||.|.|. ..|..+-.-+++-+|+||+|++. .||.++ .+++.|-+||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhc
Confidence 4567788888884 459999999999999999999997 78999999999999999999998 688764 6899999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
||+|.+. .+|+++..|..|+.|.|++|-|.-
T Consensus 157 LS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 157 LSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred cccchhh-hcCHHHHHHhhhhhhhcCCChhhH
Confidence 9999964 789999999999999999997753
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3e-07 Score=108.94 Aligned_cols=104 Identities=21% Similarity=0.210 Sum_probs=54.9
Q ss_pred cEEEEEecCCCCcccCchhhcC-----------------CCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQ-----------------LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~-----------------l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~ 232 (772)
.+..|+|++|.|++ +|+...+ .+.|+.|+|++|.|++ +|.. .++|+.|++++|.|++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss- 416 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS- 416 (788)
T ss_pred ccceEecCCCccCC-CCCCCcccceehhhccccccCcccccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-
Confidence 46677777777765 4431111 1234444444444442 3322 1345555555555553
Q ss_pred CCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 233 iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
||... .+|+.|++++|+++ .||..++++.+|+.|+|++|.|+|.+|.
T Consensus 417 IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 417 LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 44322 24555666666655 5666666666666666766666665554
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.6e-06 Score=85.31 Aligned_cols=107 Identities=20% Similarity=0.259 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhcCCC--CcccceeEEEEcCCC--ceEEEEEeccCCC-ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHH
Q 004124 524 SQFRKKIDTLSKVNH--KNFVNLIGYCEEDEP--FTRMMVFEYSPNG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 598 (772)
Q Consensus 524 ~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~--~~~~LV~Ey~~~G-sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~y 598 (772)
....+|...+.+++. =.+.+.+++...... ...++|+|++++- +|.+++..... .+...+..++.+++..++-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 457788888777743 335566676655321 2458999999874 78888853222 5566678899999999999
Q ss_pred HhcCCCCeEeeCCCCCCeEECCCC---cEEEccccCccC
Q 004124 599 MHQLTPPIAHRNLQSSSIYLTEDY---AAKISDFSFWNN 634 (772)
Q Consensus 599 LH~~~~~IvHrDLKp~NILld~~~---~~kLsDFGla~~ 634 (772)
||+.+ |+|+|+++.|||++.+. .+.+.||+-++.
T Consensus 134 lH~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHCc--CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 99999999999998876 899999987654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.27 E-value=7.1e-07 Score=71.58 Aligned_cols=61 Identities=36% Similarity=0.442 Sum_probs=40.5
Q ss_pred CCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCC
Q 004124 193 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQY 253 (772)
Q Consensus 193 ~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~ 253 (772)
++|++|+|++|.++.--+..+..+++|++|++++|.++.--|..+.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3567777777777643334566677777777777777654455667777777777777753
|
... |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.5e-06 Score=84.84 Aligned_cols=135 Identities=18% Similarity=0.192 Sum_probs=90.0
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecc-----------------cchhhhhHHHHHHHHHHHHhcCCCC--cccc
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-----------------RADWSKNLESQFRKKIDTLSKVNHK--NFVN 543 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~-----------------~~~~~~~~~~~f~~Ei~~L~~l~Hp--NIV~ 543 (772)
-..+|-|.-+.||.|..+.|.+++||.-.... ...|....+....+|.++|.++.-. .|-+
T Consensus 96 G~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~ 175 (304)
T COG0478 96 GTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK 175 (304)
T ss_pred ccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 34567788889999999999999998643221 0112222344577899999998644 5555
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc
Q 004124 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~ 623 (772)
.+++- ...+||||+++-.|...- ++....-.|+..|..-+.-.-..+ |||+|+.+=||+++++|.
T Consensus 176 P~~~n------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 176 PIAWN------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTEDGD 240 (304)
T ss_pred ccccc------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEecCCC
Confidence 55532 348999999886665432 111222233444444444443556 999999999999999999
Q ss_pred EEEccccCc
Q 004124 624 AKISDFSFW 632 (772)
Q Consensus 624 ~kLsDFGla 632 (772)
+.+.||--+
T Consensus 241 ~~vIDwPQ~ 249 (304)
T COG0478 241 IVVIDWPQA 249 (304)
T ss_pred EEEEeCccc
Confidence 999999643
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.2e-07 Score=104.37 Aligned_cols=115 Identities=20% Similarity=0.090 Sum_probs=94.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|..|+++.----++.+|+.|+.|+||+|.+..--++.+.-+++|+.||||+|+++---|.++..+..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 56788999998876555568899999999999999998888899999999999999999986555677888889999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
.|.+.-----.+-.+++|+.|||+.|.+++.|.+.
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDa 384 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDA 384 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecc
Confidence 99875333334566889999999999999888764
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.7e-06 Score=101.40 Aligned_cols=101 Identities=16% Similarity=0.312 Sum_probs=49.1
Q ss_pred eCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCE
Q 004124 166 CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTT 245 (772)
Q Consensus 166 C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~ 245 (772)
|-....+.|+|++++|+. +|..+. ++|+.|+|++|.++ .+|..+. ++|+.|+|++|+|+ .||..+. .+|+.
T Consensus 175 Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~ 245 (754)
T PRK15370 175 CLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQE 245 (754)
T ss_pred hcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccE
Confidence 433345566666655553 444332 34555555555555 3454433 35555555555555 3444332 24555
Q ss_pred EECccCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 246 LLLDNNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 246 L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
|+|++|++. .||..+. .+|+.|+|++|.++
T Consensus 246 L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 246 MELSINRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred EECcCCccC-cCChhHh--CCCCEEECcCCccC
Confidence 555555544 4444432 24455555555544
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.3e-07 Score=102.23 Aligned_cols=139 Identities=21% Similarity=0.314 Sum_probs=97.9
Q ss_pred HHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC------------------CccccchhhhccCC
Q 004124 591 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA------------------KTGSAAMELLETSA 652 (772)
Q Consensus 591 ~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~------------------~~~~~aPE~~~~~~ 652 (772)
+++.|+.|+|.. ..+||++|.|++|.++.++..||+.|+++-..... ...|.|||.+....
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 344899999964 25999999999999999999999999875322221 12456999998888
Q ss_pred CCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCC
Q 004124 653 VDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731 (772)
Q Consensus 653 ~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R 731 (772)
.+.++|+||+||++|-+.. |+.-+...+. ...+....... +.....+..+.+.++.+=+.+.+..++..|
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~~~~--------~~~~~~~s~~~p~el~~~l~k~l~~~~~~r 256 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSRNLL--------NAGAFGYSNNLPSELRESLKKLLNGDSAVR 256 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhhccc--------ccccccccccCcHHHHHHHHHHhcCCcccC
Confidence 8999999999999999984 5544433322 22221111111 111222335566788888899999999999
Q ss_pred CCHHHHHH
Q 004124 732 PSMRGIAA 739 (772)
Q Consensus 732 Ps~~evl~ 739 (772)
|++.++..
T Consensus 257 p~~~~l~~ 264 (700)
T KOG2137|consen 257 PTLDLLLS 264 (700)
T ss_pred cchhhhhc
Confidence 98777653
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.5e-07 Score=95.49 Aligned_cols=112 Identities=25% Similarity=0.276 Sum_probs=79.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCC---CCEEEcccCcCcc----cCchhhcCC-CCCCEeeccCCcCccc----CCcc
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSE---LKSIILRNNSFFG----TIPKEIGEL-KELEILDLGFNNFSGP----FPSD 236 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~---L~~L~L~~N~l~G----~iP~~l~~l-~~L~~L~ls~N~l~G~----iP~~ 236 (772)
.+++.|+|+++.+.+..+..+..+.. |++|++++|.+++ .+...+..+ ++|+.|+|++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 46788888888887766666666555 8888888888873 344456666 7888888888888853 3334
Q ss_pred cCCCCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCCc
Q 004124 237 FGNSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+..+.+|+.|++++|.+++. ++..+..+++|+.|+|++|.+++.
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 208 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE 208 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH
Confidence 55667788888888888752 444555667888888888877643
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.8e-05 Score=83.51 Aligned_cols=190 Identities=14% Similarity=0.216 Sum_probs=120.2
Q ss_pred EEEEEeccCCC-Chhhhhh----hhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 556 RMMVFEYSPNG-SLFEHLH----IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 556 ~~LV~Ey~~~G-sL~~~L~----~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
.-+.|..+++. -+..++. .+.....+|...++++..+|.+.+-||+.+ .+-+|+.++|+|+.+++.+.+.|=.
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecCceEEEEccc
Confidence 45666666543 1222222 123456899999999999999999999988 7779999999999999999887642
Q ss_pred ---C-----ccCCCCCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcC-CCcccCCC------CCHH-HHHHH
Q 004124 631 ---F-----WNNTTAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITG-RISYSIEN------GSLE-NWASE 689 (772)
Q Consensus 631 ---l-----a~~~~~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG-~~P~~~~~------~~~~-~~~~~ 689 (772)
+ ......+...|..||.-. +-.-+...|-|.+||++++++.| ++||.+-. .-.+ .....
T Consensus 163 sfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 163 SFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 2 222344566788999753 33456789999999999999986 99996311 1111 11100
Q ss_pred HhhcCCCCccccCCcccccc-HHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHHhhhhc
Q 004124 690 YLKGEQPLKDIVDPTLKSFQ-ENVLEELLVVIKNCVHPD--PKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~-~~~~~~l~~Li~~Cl~~d--P~~RPs~~evl~~L~~i~~~ 747 (772)
.+.....-..-..+.....+ .-.+..+..+..+|.... +.-||+++.-+..|.++.+.
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 00000000000001111111 223456667778888643 56899999988888776553
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.4e-06 Score=94.12 Aligned_cols=110 Identities=25% Similarity=0.385 Sum_probs=82.0
Q ss_pred cEEEEEecCCCCcc----cCchhhcCC-CCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CCcc
Q 004124 170 KVVILNLRDLCLGG----MLAPELGQL-SELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FPSD 236 (772)
Q Consensus 170 ~v~~l~L~~~~l~G----~ip~~l~~l-~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~ 236 (772)
+++.|+|+++.+++ .+...+..+ ++|+.|+|++|.+++. ++..+..+.+|+.|+|++|.+++. ++..
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 47888888888873 344456667 8889999999988853 444566778899999999988853 4445
Q ss_pred cCCCCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCC
Q 004124 237 FGNSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 55667889999998888643 34455677889999999888876
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.3e-06 Score=97.73 Aligned_cols=102 Identities=18% Similarity=0.287 Sum_probs=86.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+. .+|..+. ++|++|+|++|+|+ .||..+. .+|+.|+|++|++. .||..+. .+|+.|++
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 36889999999998 4787665 58999999999998 5887654 47999999999998 7898775 48999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|+++ .+|..+. .+|+.|+|++|.|++ +|.
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~ 300 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPA 300 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCcccc-Ccc
Confidence 999998 5887665 589999999999995 453
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-06 Score=68.85 Aligned_cols=61 Identities=28% Similarity=0.284 Sum_probs=53.4
Q ss_pred CCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCC
Q 004124 217 KELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWL 277 (772)
Q Consensus 217 ~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l 277 (772)
++|+.|++++|+++.--+..+.++++|++|++++|.++.--|..+..+++|++|++++|.+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4789999999999954446789999999999999999866666889999999999999975
|
... |
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.2e-07 Score=105.26 Aligned_cols=106 Identities=27% Similarity=0.328 Sum_probs=93.5
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..|.|.+|.|+...-|-|-++.+|+.|+|++|+|. .+|+ .+.++..|+.|+||+|.|+ .||..+.++..|++|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 5677888999999988888999999999999999996 6775 5788999999999999998 79999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+|++. .+| ++..++.|+.+|++.|+++-
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 999876 466 89999999999999999884
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.6e-07 Score=94.81 Aligned_cols=46 Identities=33% Similarity=0.570 Sum_probs=25.8
Q ss_pred ccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCC
Q 004124 207 GTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQY 253 (772)
Q Consensus 207 G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~ 253 (772)
+-+|.++..+++|..|+|++|.+. .+|.+++.+..|+.||++.|.|
T Consensus 425 sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrF 470 (565)
T KOG0472|consen 425 SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRF 470 (565)
T ss_pred ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccccccc
Confidence 344555555555666666555544 4555555555566666655554
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-06 Score=102.01 Aligned_cols=103 Identities=20% Similarity=0.272 Sum_probs=89.5
Q ss_pred CcEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.++..|+|+.|+|.- +|. .+.+|..|+.|+||+|.|+ .||..+.+|..|+.|...+|++. .+| ++..++.|+++|
T Consensus 383 ~hLKVLhLsyNrL~~-fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLNS-FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred cceeeeeeccccccc-CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 468899999999865 554 5889999999999999998 79999999999999999999998 577 899999999999
Q ss_pred CccCCCcc-cCChhhcCCCCCCEEEcCCCC
Q 004124 248 LDNNQYLG-GISPELHVLKVISEIQVDESW 276 (772)
Q Consensus 248 l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~ 276 (772)
+|.|+++- .+|. .-..++|++|||++|.
T Consensus 459 lS~N~L~~~~l~~-~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPE-ALPSPNLKYLDLSGNT 487 (1081)
T ss_pred cccchhhhhhhhh-hCCCcccceeeccCCc
Confidence 99999974 4444 3334899999999995
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.04 E-value=9.8e-06 Score=102.61 Aligned_cols=111 Identities=20% Similarity=0.193 Sum_probs=75.1
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|+++.+. .++..+..+++|+.|+|++|..-+.+|. ++.+++|+.|+|++|..-..+|.+++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 4556666666654 3556666777777777777665566663 6677777777777776666777777777777777777
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|...+.+|..+ ++++|+.|+|++|...+.+|.
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~ 722 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD 722 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCCCcccccc
Confidence 766666777655 567777777777655555443
|
syringae 6; Provisional |
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.3e-05 Score=95.36 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=29.2
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 230 (772)
+++.|+|.+|+|+. ||. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.++
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~ 275 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT 275 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh
Confidence 45566666666664 443 2456777777777776 34532 234444444444444
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.7e-06 Score=81.57 Aligned_cols=103 Identities=26% Similarity=0.338 Sum_probs=41.2
Q ss_pred cEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEEE
Q 004124 170 KVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L~ 247 (772)
+...|+|++|.++- | ..++ .|++|+.|+|++|.++. |+ .+..+++|+.|++++|.++. +...+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 35678888888654 2 3465 57899999999999984 44 47789999999999999984 55444 3688999999
Q ss_pred CccCCCcc--cCChhhcCCCCCCEEEcCCCCCC
Q 004124 248 LDNNQYLG--GISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G--~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
|++|++.. .+ ..+..+++|+.|+|.+|-++
T Consensus 95 L~~N~I~~l~~l-~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNEL-EPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCC-GGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHh-HHHHcCCCcceeeccCCccc
Confidence 99999864 32 46778999999999999765
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.7e-06 Score=91.54 Aligned_cols=106 Identities=24% Similarity=0.229 Sum_probs=79.3
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..|+|++|.|+..-+..+-+|++|+.++|..|.|+ .||...+...+|+.|+|.+|.++----.++.-++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 567999999999888888999999999999999987 6887776677788888888877654445566677777777777
Q ss_pred CCCcccCC-hhhcCCCCCCEEEcCCCCCC
Q 004124 251 NQYLGGIS-PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 251 N~~~G~iP-~~~~~l~~L~~l~l~~N~l~ 278 (772)
|.++ .|| +.+..-.++++|+|++|.+|
T Consensus 159 N~is-~i~~~sfp~~~ni~~L~La~N~It 186 (873)
T KOG4194|consen 159 NLIS-EIPKPSFPAKVNIKKLNLASNRIT 186 (873)
T ss_pred chhh-cccCCCCCCCCCceEEeecccccc
Confidence 7765 333 23444466777777777665
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.3e-05 Score=86.36 Aligned_cols=147 Identities=16% Similarity=0.212 Sum_probs=92.1
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhh-----------------------------hhH------HHHHHH
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS-----------------------------KNL------ESQFRK 528 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~-----------------------------~~~------~~~f~~ 528 (772)
..++.++-|.||+|++++|+.||||+....-..... +.. +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 346678889999999999999999997543221110 000 112455
Q ss_pred HHHHHhcCC----CCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHH-HHHHhcCC
Q 004124 529 KIDTLSKVN----HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC-LEHMHQLT 603 (772)
Q Consensus 529 Ei~~L~~l~----HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~g-L~yLH~~~ 603 (772)
|...+.+++ +..=|++=.+|++-.. ...|+|||++|-.+.+....+. ...+ +..|+..++++ +..+-..+
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~-~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTT-RRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccC-CcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhcC
Confidence 655555552 2223344444443111 3589999999988888743222 3344 33344444333 22222235
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCccCCCC
Q 004124 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA 637 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~ 637 (772)
+.|.|..|.||+++.+++.-+-|||+......
T Consensus 286 --ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 --FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999998654433
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.3e-05 Score=97.82 Aligned_cols=88 Identities=25% Similarity=0.260 Sum_probs=49.9
Q ss_pred eeeEEeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCC
Q 004124 161 WFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240 (772)
Q Consensus 161 w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l 240 (772)
|.|+.+ -.++..|+|+++..-+.+| .++.+++|+.|+|++|..-..+|..++++++|+.|++++|..-+.+|..+ ++
T Consensus 627 ~~~~~~-l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 627 WDGVHS-LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred cccccc-CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 666532 2345666776655445554 36666666666666665556666666666666666666654444555443 34
Q ss_pred CCCCEEECccC
Q 004124 241 FSLTTLLLDNN 251 (772)
Q Consensus 241 ~~L~~L~l~~N 251 (772)
++|+.|++++|
T Consensus 704 ~sL~~L~Lsgc 714 (1153)
T PLN03210 704 KSLYRLNLSGC 714 (1153)
T ss_pred CCCCEEeCCCC
Confidence 44444444443
|
syringae 6; Provisional |
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.1e-05 Score=75.58 Aligned_cols=100 Identities=21% Similarity=0.283 Sum_probs=77.7
Q ss_pred HHHHHHHhcCCC-CcccceeEEEEcCCCceEEEEEeccCCCChhhhhhh-hccCCCCHHHHHHHHHHHHHHHHHHhcC-C
Q 004124 527 RKKIDTLSKVNH-KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHI-QEAEHLDWAMRLRIAMGMAYCLEHMHQL-T 603 (772)
Q Consensus 527 ~~Ei~~L~~l~H-pNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~-~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~ 603 (772)
..|.-+|..+.+ +++.+++|+|- .++|.||.+.+++...... .....-+|..|.+||.++.+.+++++.. .
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357778888866 69999999992 3789999998766432100 0112468999999999999999999642 2
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
..+.-.|++++|+-+++++++|+.|....
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v 109 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDV 109 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhc
Confidence 23778999999999999999999999754
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00019 Score=81.74 Aligned_cols=169 Identities=13% Similarity=0.142 Sum_probs=100.9
Q ss_pred cCCCCCCHHHHHHHhhc-c--------cccc-cccCccceEEEEEEEEcCCcEEEEEEeeecccchhh------------
Q 004124 462 TGVPKLKRSELEAACED-F--------SNII-GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS------------ 519 (772)
Q Consensus 462 ~~~~~~~~~el~~~~~~-f--------~~ii-g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~------------ 519 (772)
...|.++.+|+.+..+. + .++- ..+|.-+.|.||+|++++|..||||+-+..-.....
T Consensus 135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~ 214 (538)
T KOG1235|consen 135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKV 214 (538)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHH
Confidence 45677777766543321 1 1111 356778888999999999999999987644222110
Q ss_pred --------------hhH------HHHHHHHHHHHhcC----CCCcc---cceeEEEEcCCCceEEEEEeccCCCChhhhh
Q 004124 520 --------------KNL------ESQFRKKIDTLSKV----NHKNF---VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL 572 (772)
Q Consensus 520 --------------~~~------~~~f~~Ei~~L~~l----~HpNI---V~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L 572 (772)
++. +-+|.+|.+-..++ +|-+. |.+=.++++-.. .+.|+||||+|..+.+.-
T Consensus 215 l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st-~RVLtME~~~G~~i~Dl~ 293 (538)
T KOG1235|consen 215 LQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST-KRVLTMEYVDGIKINDLD 293 (538)
T ss_pred HHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc-ceEEEEEecCCccCCCHH
Confidence 011 11255565554443 35551 222233333211 468999999998887764
Q ss_pred hhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEECC----CCcEEEccccCccCCCC
Q 004124 573 HIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTE----DYAAKISDFSFWNNTTA 637 (772)
Q Consensus 573 ~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILld~----~~~~kLsDFGla~~~~~ 637 (772)
... ...++.. .|+..+.++...+ =..| ++|+|=.|.||+++. ++++.+-|||+......
T Consensus 294 ~i~-~~gi~~~---~i~~~l~~~~~~qIf~~G--ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 294 AID-KRGISPH---DILNKLVEAYLEQIFKTG--FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHH-HcCCCHH---HHHHHHHHHHHHHHHhcC--CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 322 2334443 3444443332222 1234 999999999999983 67899999999765544
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00019 Score=73.87 Aligned_cols=137 Identities=11% Similarity=0.088 Sum_probs=79.0
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc--ccceeEEEEcCCCceEEEEEe
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN--IV~l~g~~~~~~~~~~~LV~E 561 (772)
..+|.|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+.++++...+ ...+|||
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~--~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG--RLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC--eeeeeee
Confidence 34677888899984 24456677654321 1234678899988885433 466677776655 3578999
Q ss_pred ccCCCC-hhhh---------------------hhhhccCCCCHHHHH-HHHH----------HHHH-HHHHHh--cCCCC
Q 004124 562 YSPNGS-LFEH---------------------LHIQEAEHLDWAMRL-RIAM----------GMAY-CLEHMH--QLTPP 605 (772)
Q Consensus 562 y~~~Gs-L~~~---------------------L~~~~~~~l~~~~~~-~Ia~----------~ia~-gL~yLH--~~~~~ 605 (772)
+++|.+ +... +|.-.........+. .+.. .+.. ..++|. ...+.
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 998863 2111 111000111111100 0000 0111 122222 23346
Q ss_pred eEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 606 IAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 606 IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
++|+|+.|.||++++++ +.|.||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 89999999999999888 9999998754
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00028 Score=71.90 Aligned_cols=143 Identities=17% Similarity=0.183 Sum_probs=92.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhh-------------------hhHHHHHHHHHHHHhcCC--CC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS-------------------KNLESQFRKKIDTLSKVN--HK 539 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~-------------------~~~~~~f~~Ei~~L~~l~--Hp 539 (772)
++.|.++.|.-+.||+|.-.++..+|||+.......-.. .....=..+|..-|.++. +-
T Consensus 51 ~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV 130 (268)
T COG1718 51 ELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV 130 (268)
T ss_pred eeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 677889999999999999888999999998654321100 000011345666676663 33
Q ss_pred cccceeEEEEcCCCceEEEEEeccCCCC-hhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh-cCCCCeEeeCCCCCCeE
Q 004124 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGS-LFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 540 NIV~l~g~~~~~~~~~~~LV~Ey~~~Gs-L~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH-~~~~~IvHrDLKp~NIL 617 (772)
.+-+-+++. .-.|||||+.... -.-.|. .-.+.......+..++.+.+.-|- ..+ +||+||..=|||
T Consensus 131 rvP~Pi~~~------~nVLvMEfIg~~g~pAP~Lk---Dv~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL 199 (268)
T COG1718 131 RVPEPIAFR------NNVLVMEFIGDDGLPAPRLK---DVPLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNIL 199 (268)
T ss_pred CCCCceeec------CCeEEEEeccCCCCCCCCcc---cCCcCchhHHHHHHHHHHHHHHHHHhcC--cccccchhhheE
Confidence 333444433 2379999996531 111111 111222245556677777777774 477 999999999999
Q ss_pred ECCCCcEEEccccCccCC
Q 004124 618 LTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~ 635 (772)
+. ++.+.|+|||-+...
T Consensus 200 ~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 200 VH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred EE-CCeEEEEECcccccc
Confidence 99 889999999976543
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.70 E-value=3.4e-06 Score=93.20 Aligned_cols=112 Identities=19% Similarity=0.335 Sum_probs=85.5
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..+-+++|.+ +.+|++++.+..|..||.+.|.+. .+|+.++.+.+|+.|++..|++. .+|.++..| .|..||+|.
T Consensus 145 Lkvli~sNNkl-~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfSc 220 (722)
T KOG0532|consen 145 LKVLIVSNNKL-TSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSC 220 (722)
T ss_pred ceeEEEecCcc-ccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeeccc
Confidence 33455566665 347777887788888888888876 57888888888888888888877 578888744 688899999
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCcccccccCC
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNS 288 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 288 (772)
|+++ .||..+.+++.|++|.|.+|-|+. -|...|..
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~k 256 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQS-PPAQICEK 256 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCCC-ChHHHHhc
Confidence 9876 789999999999999999999984 34444443
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.70 E-value=8.1e-06 Score=90.31 Aligned_cols=110 Identities=26% Similarity=0.338 Sum_probs=78.5
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++-++|+.|+++- +|..++.|+ |+.|.+++|+++ .+|.+++.+..|..||.|.|.+. .+|+.++.+.+|+.|++.
T Consensus 122 ~lt~l~ls~NqlS~-lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vr 197 (722)
T KOG0532|consen 122 ALTFLDLSSNQLSH-LPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVR 197 (722)
T ss_pred HHHHhhhccchhhc-CChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHh
Confidence 45566777777654 666777775 777777777775 67777777777777888877776 577777777778777777
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCccccccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASRASC 286 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 286 (772)
.|++. .+|++++. -.|..||++.|+++ .||...+
T Consensus 198 Rn~l~-~lp~El~~-LpLi~lDfScNkis-~iPv~fr 231 (722)
T KOG0532|consen 198 RNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLPVDFR 231 (722)
T ss_pred hhhhh-hCCHHHhC-CceeeeecccCcee-ecchhhh
Confidence 77764 56777773 34677777877777 4665443
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00037 Score=72.50 Aligned_cols=131 Identities=12% Similarity=0.112 Sum_probs=76.7
Q ss_pred EEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEEEeccCCCChhh
Q 004124 492 GTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570 (772)
Q Consensus 492 G~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~ 570 (772)
..||+.... +..+.||...... ..+..+|++++..+. +--+.+++++....+ ..++||||++|.++..
T Consensus 13 ~~v~~~~~~-~~~~~vk~~~~~~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 13 ATVYRLDGK-NPGLYLKIAPSGP--------TYELEREAERLRWLAGKLPVPEVIDYGSDDG--RAWLLTSAVPGVPAAA 81 (244)
T ss_pred CeEEEEcCC-CCcEEEEecCCCc--------ccchHHHHHHHHHHHhcCCCCeEEEEEecCC--ccEEEEEeeCCccHhH
Confidence 588999765 3667777654321 124667888888773 334556777766543 4589999999877754
Q ss_pred hh-------------------hhhccC--CCC--HHHHHHHHH--------------------HHHHHHHHHh-----cC
Q 004124 571 HL-------------------HIQEAE--HLD--WAMRLRIAM--------------------GMAYCLEHMH-----QL 602 (772)
Q Consensus 571 ~L-------------------~~~~~~--~l~--~~~~~~Ia~--------------------~ia~gL~yLH-----~~ 602 (772)
.. |..... .+. +..++.... .+....+.|- ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 31 111000 111 001110000 0111222221 12
Q ss_pred CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 ~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.+.++|+|+.|.|||++++....|.||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 3459999999999999998888999998643
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=66.49 Aligned_cols=65 Identities=14% Similarity=0.195 Sum_probs=51.7
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.+|||||++|..|.+... ++. .++..+.+++.-+|+.| ++|+|..|.|+++++++ +++.||+..+
T Consensus 118 ~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 118 YVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred EEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEECCc-EEEEECcccc
Confidence 468999999988876532 222 25566778899999999 99999999999999655 9999998654
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00085 Score=82.22 Aligned_cols=82 Identities=11% Similarity=0.238 Sum_probs=54.7
Q ss_pred ccccCccceEEEEEEEEcCC---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcc--cceeEEEEcCCC-ce
Q 004124 483 IGSFSDGTVGTVYKGTLSSG---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNF--VNLIGYCEEDEP-FT 555 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNI--V~l~g~~~~~~~-~~ 555 (772)
+..++.|.+..+|+.....+ ..+++|+....... .....+.+|+++|+.+. |.+| .+++++|.+... ..
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~----~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~ 118 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL----QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGT 118 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC----ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCC
Confidence 45667788889999887654 35666654322111 11246889999999995 6665 778888876421 14
Q ss_pred EEEEEeccCCCCh
Q 004124 556 RMMVFEYSPNGSL 568 (772)
Q Consensus 556 ~~LV~Ey~~~GsL 568 (772)
.++||||+++..+
T Consensus 119 ~flVME~v~G~~~ 131 (822)
T PLN02876 119 AFYIMEYLEGRIF 131 (822)
T ss_pred ceEEEEecCCccc
Confidence 6899999987543
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.52 E-value=9.1e-05 Score=55.00 Aligned_cols=36 Identities=36% Similarity=0.539 Sum_probs=19.7
Q ss_pred CCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCc
Q 004124 194 ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230 (772)
Q Consensus 194 ~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 230 (772)
+|++|+|++|+++ .||+.+++|++|+.|++++|.++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555666666655 45555555666666666665555
|
... |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=97.52 E-value=6.7e-05 Score=73.49 Aligned_cols=87 Identities=28% Similarity=0.389 Sum_probs=29.5
Q ss_pred hhcCCCCCCEEEcccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhh-cCCC
Q 004124 188 ELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL-HVLK 265 (772)
Q Consensus 188 ~l~~l~~L~~L~L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~-~~l~ 265 (772)
.+.+...++.|+|++|.++- |. .++ .+.+|+.||||+|.++. ++ .+..++.|+.|++++|.++. +++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred cccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 34566679999999999973 43 566 58899999999999984 43 57789999999999999874 65555 3689
Q ss_pred CCCEEEcCCCCCCC
Q 004124 266 VISEIQVDESWLTN 279 (772)
Q Consensus 266 ~L~~l~l~~N~l~g 279 (772)
+|+.|+|++|.+..
T Consensus 89 ~L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 89 NLQELYLSNNKISD 102 (175)
T ss_dssp T--EEE-TTS---S
T ss_pred cCCEEECcCCcCCC
Confidence 99999999999874
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00098 Score=68.10 Aligned_cols=141 Identities=18% Similarity=0.205 Sum_probs=79.9
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC--cccceeEEEEcCC-CceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK--NFVNLIGYCEEDE-PFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp--NIV~l~g~~~~~~-~~~~~LV~ 560 (772)
..++.|..+.||+....+ ..+++|..... .....+.+|..++..+... -+.+++.++.... ....+++|
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 456678888999999887 58888875432 2345677888888887433 3556776554332 12468999
Q ss_pred eccCCCChhh----------------hh---hhhc--cCCCCHHH---------HHHH------------HHHHHH-HHH
Q 004124 561 EYSPNGSLFE----------------HL---HIQE--AEHLDWAM---------RLRI------------AMGMAY-CLE 597 (772)
Q Consensus 561 Ey~~~GsL~~----------------~L---~~~~--~~~l~~~~---------~~~I------------a~~ia~-gL~ 597 (772)
+|+++..+.. .+ |... .....+.. .... ...+.+ .++
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999887776 11 1110 01111110 0000 112222 333
Q ss_pred HHhc-----CCCCeEeeCCCCCCeEEC-CCCcEEEccccCc
Q 004124 598 HMHQ-----LTPPIAHRNLQSSSIYLT-EDYAAKISDFSFW 632 (772)
Q Consensus 598 yLH~-----~~~~IvHrDLKp~NILld-~~~~~kLsDFGla 632 (772)
.+++ ....++|+|+.+.|||++ +++.+.|.||+.+
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a 195 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA 195 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccc
Confidence 3332 234699999999999999 6666789999864
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.48 E-value=9.3e-05 Score=54.95 Aligned_cols=36 Identities=39% Similarity=0.487 Sum_probs=20.7
Q ss_pred CCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCc
Q 004124 218 ELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYL 254 (772)
Q Consensus 218 ~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~ 254 (772)
+|++|++++|+++ .||+.+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4666666666666 45555666666666666666554
|
... |
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0033 Score=67.51 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=54.3
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC---CcccceeEEEEcCC-CceEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH---KNFVNLIGYCEEDE-PFTRM 557 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H---pNIV~l~g~~~~~~-~~~~~ 557 (772)
-++.+|.|..+.||+....+++ +.+|..+... ....|..|.+.|+.+.- -.+.+++++|.... ....+
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~-------~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~ 89 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-PMPLMARSFS-------TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV 89 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-EEEEEecccc-------cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence 3567889999999998766564 5555532210 12468899999988843 36788888876431 11469
Q ss_pred EEEeccCCCCh
Q 004124 558 MVFEYSPNGSL 568 (772)
Q Consensus 558 LV~Ey~~~GsL 568 (772)
+|||+++++++
T Consensus 90 LVmE~i~G~~~ 100 (297)
T PRK10593 90 LLLERLRGVSV 100 (297)
T ss_pred EEEeccCCEec
Confidence 99999998765
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.37 E-value=4e-05 Score=86.35 Aligned_cols=171 Identities=18% Similarity=0.134 Sum_probs=117.3
Q ss_pred cCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc-ccceeEEEEcCCCceEEEEEeccC
Q 004124 486 FSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN-FVNLIGYCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 486 lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN-IV~l~g~~~~~~~~~~~LV~Ey~~ 564 (772)
+++|+++.+||.+-...+.+.++.+... ....-++++|.+++||| .|..++-+...+ ..+++++|+.
T Consensus 250 fvK~altknpKkRptaeklL~h~fvs~~----------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~--~~~i~~~i~s 317 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQHPFVSQT----------LSRRLAIELLDKVNNPNPVVRYLEDYDGED--YLWIPMRICS 317 (829)
T ss_pred HHHHHhcCCCccCCChhhheeceeeccc----------hhhHHHHHHHHHccCCCCcccccccCCccc--ccchhhhhhc
Confidence 3458888999987544444444443321 23455788999999999 666666555444 5789999998
Q ss_pred CC-ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-------
Q 004124 565 NG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT------- 636 (772)
Q Consensus 565 ~G-sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~------- 636 (772)
.| +-..... .....+...+...+...-.++++|+|+.. -+||| ||+..+ ...|..||+......
T Consensus 318 ~~rs~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t 389 (829)
T KOG0576|consen 318 TGRSSALEMT-VSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRT 389 (829)
T ss_pred CCccccccCC-hhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc-cccccccccCCcccCccccccc
Confidence 87 3222211 11122333344556667778999999754 58998 777665 678999999754332
Q ss_pred -CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcc
Q 004124 637 -AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 637 -~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
.++..+++||+.....+..+.|+|+.|+--.++.-|-.|-
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 3455678999999999999999999998777777776664
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.36 E-value=9.4e-05 Score=89.81 Aligned_cols=106 Identities=29% Similarity=0.298 Sum_probs=87.9
Q ss_pred cEEEEEecCCCC-cccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 170 KVVILNLRDLCL-GGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l-~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++|-+.+|.. -..++.. +-.++.|+.|||++|.=-|.+|..+++|-+|++|||+...++ .+|.+++++..|.+||
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 467777777753 3445554 666999999999998888889999999999999999999998 7999999999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCC
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESW 276 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~ 276 (772)
+..+.....+|--+..+.+|++|.+-...
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccc
Confidence 99988777777666779999999886654
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00011 Score=82.09 Aligned_cols=101 Identities=31% Similarity=0.364 Sum_probs=51.8
Q ss_pred EEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCC-CCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004124 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELK-ELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 174 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~-~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
+++.++.+...+. .+..++.++.|++.+|+++ .||+..+.++ +|+.|++++|.+. .+|..++++++|+.|++++|+
T Consensus 98 l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLRSNIS-ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccccCch-hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 4444444433222 2334455555555555555 4555555553 5555555555555 344445555555555555555
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 253 YLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
++ .+|...+.+..|+.|++++|.++
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~ 199 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS 199 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc
Confidence 44 34444445555555555555555
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0018 Score=66.96 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=24.9
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.++|+|+.+.|||++++...-|.||+.+.
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 48999999999999977666799999754
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.21 E-value=7.8e-05 Score=76.55 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=44.8
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
++.+||++|.++ .|..+..-++.++.|++|.|.+. .+- .+..+.+|+.||||+|.++- +-..--.+.+.+.|.|+.
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHh-hhhhHhhhcCEeeeehhh
Confidence 344555554432 23444444555555555555553 111 14445555555555555441 111112233445555555
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
|.+.. -+.++++-.|..||+++|++.
T Consensus 362 N~iE~--LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 362 NKIET--LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhHhh--hhhhHhhhhheeccccccchh
Confidence 54311 012344445555555555443
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00026 Score=79.21 Aligned_cols=103 Identities=27% Similarity=0.485 Sum_probs=90.9
Q ss_pred cEEEEEecCCCCcccCchhhcCCC-CCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLS-ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~-~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++.+++.+|++.- |++.++.+. +|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|...+.++.|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 57889998888765 778888885 9999999999997 67778999999999999999999 68887778999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESW 276 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~ 276 (772)
++|+++ .||..+..+..|+.|.+++|.
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNS 220 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCc
Confidence 999976 788888888889999999995
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 772 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-28 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-28 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-22 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-22 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-21 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-21 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-20 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-18 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 6e-18 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-18 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-17 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-17 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-17 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 4e-17 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-17 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 7e-17 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-16 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 5e-16 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 5e-16 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 5e-16 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 5e-16 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 5e-16 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 6e-16 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 6e-16 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 6e-16 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 7e-16 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-14 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-14 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 8e-14 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-13 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 3e-13 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 7e-13 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 9e-13 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 1e-12 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-12 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-12 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-12 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-12 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-12 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-12 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-12 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-12 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-12 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 6e-12 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 1e-11 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-11 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 2e-11 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-11 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 2e-11 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-11 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 2e-11 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-11 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-11 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-11 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-11 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 3e-11 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-11 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 3e-11 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-11 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-11 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 4e-11 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-11 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-11 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 5e-11 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-11 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 5e-11 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-11 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 5e-11 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 6e-11 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 6e-11 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 7e-11 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 7e-11 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 7e-11 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 7e-11 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 7e-11 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 7e-11 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 7e-11 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 8e-11 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 8e-11 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 8e-11 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 8e-11 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 8e-11 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 8e-11 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 8e-11 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 8e-11 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 9e-11 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-10 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 1e-10 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 1e-10 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-10 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 2e-10 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-10 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-10 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-10 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-10 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-10 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 2e-10 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 2e-10 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 2e-10 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-10 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-10 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-10 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 3e-10 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 3e-10 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-10 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-10 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-10 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 3e-10 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-10 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-10 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-10 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-10 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 4e-10 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 4e-10 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-10 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-10 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 4e-10 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 4e-10 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 4e-10 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 5e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 5e-10 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 5e-10 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 6e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 6e-10 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-10 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-10 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 7e-10 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-10 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-10 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-10 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 8e-10 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 8e-10 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-10 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 9e-10 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 9e-10 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 1e-09 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-09 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 1e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 1e-09 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-09 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-09 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 2e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 2e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-09 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 2e-09 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 2e-09 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-09 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-09 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-09 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 3e-09 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 3e-09 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-09 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 3e-09 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 4e-09 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-09 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 5e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 6e-09 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 7e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 7e-09 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 7e-09 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 1e-08 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-08 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-08 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-08 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 2e-08 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-08 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 3e-08 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 3e-08 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 3e-08 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-08 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 4e-08 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-08 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-08 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-08 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 4e-08 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 5e-08 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 5e-08 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 5e-08 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 5e-08 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 5e-08 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 5e-08 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-08 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 5e-08 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 5e-08 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-08 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 6e-08 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 6e-08 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 6e-08 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 6e-08 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 6e-08 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-08 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-08 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 7e-08 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 7e-08 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 7e-08 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 8e-08 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 8e-08 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 9e-08 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 9e-08 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 9e-08 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-07 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 1e-07 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 1e-07 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 1e-07 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-07 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 1e-07 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 1e-07 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 1e-07 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 1e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 1e-07 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 1e-07 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-07 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 1e-07 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-07 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-07 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-07 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-07 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-07 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-07 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 2e-07 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 2e-07 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-07 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-07 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-07 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-07 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-07 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-07 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-07 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-07 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-07 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 2e-07 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 2e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-07 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 3e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 3e-07 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 3e-07 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-07 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 3e-07 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-07 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 4e-07 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 4e-07 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 4e-07 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 4e-07 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 5e-07 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 5e-07 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 5e-07 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 5e-07 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 6e-07 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-07 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 7e-07 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 8e-07 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 8e-07 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 8e-07 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 8e-07 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 8e-07 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 8e-07 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 8e-07 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 8e-07 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 8e-07 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 9e-07 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 9e-07 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 9e-07 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 9e-07 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 9e-07 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-07 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 1e-06 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-06 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 1e-06 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-06 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-06 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 2e-06 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 2e-06 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-06 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 2e-06 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-06 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-06 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-06 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-06 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 3e-06 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 3e-06 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 3e-06 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-06 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 5e-06 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 5e-06 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 5e-06 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-06 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 5e-06 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 6e-06 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 6e-06 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-06 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 6e-06 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 6e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 7e-06 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 7e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 7e-06 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 8e-06 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 8e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 8e-06 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 8e-06 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-06 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 9e-06 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 9e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 9e-06 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-05 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-05 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-05 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 1e-05 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 1e-05 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-05 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-05 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-05 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 1e-05 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 1e-05 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-05 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 1e-05 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-05 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-05 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-05 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-05 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-05 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 2e-05 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-05 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-05 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 2e-05 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 2e-05 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-05 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-05 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 2e-05 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-05 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 2e-05 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 2e-05 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 2e-05 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 2e-05 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 2e-05 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 2e-05 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 3e-05 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 3e-05 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-05 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 3e-05 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 3e-05 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 3e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 3e-05 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 3e-05 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 3e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 4e-05 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 4e-05 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 4e-05 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 5e-05 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 6e-05 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 6e-05 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-05 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 6e-05 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 6e-05 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 7e-05 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 7e-05 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 7e-05 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 7e-05 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-05 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 8e-05 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 8e-05 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 9e-05 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 9e-05 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 9e-05 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 9e-05 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 9e-05 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 1e-04 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-04 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 1e-04 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-04 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 1e-04 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-04 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 1e-04 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 1e-04 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 1e-04 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 1e-04 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 1e-04 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 1e-04 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 1e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-04 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-04 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 1e-04 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 1e-04 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-04 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 1e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 2e-04 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 2e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-04 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 2e-04 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 2e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-04 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-04 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 2e-04 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 2e-04 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-04 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 2e-04 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 2e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 2e-04 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 2e-04 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 2e-04 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-04 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-04 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-04 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-04 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 3e-04 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 3e-04 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 3e-04 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 3e-04 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 3e-04 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 3e-04 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 3e-04 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 3e-04 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 3e-04 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 3e-04 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 3e-04 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 3e-04 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 4e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-04 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 4e-04 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 4e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 4e-04 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 4e-04 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 5e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-04 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 5e-04 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 5e-04 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 6e-04 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-04 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 6e-04 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 6e-04 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 8e-04 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 8e-04 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 8e-04 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 8e-04 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 8e-04 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 8e-04 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 8e-04 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 2e-61
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 45/305 (14%)
Query: 470 SELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
+LE A +F +IG G G VYKG L G ++A+ K R S +F
Sbjct: 32 VDLEEATNNFDHKFLIGH---GVFGKVYKGVLRDGAKVAL-----KRRTPESSQGIEEFE 83
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMR 585
+I+TLS H + V+LIG+C+E +++++Y NG+L HL+ + W R
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM 645
L I +G A L ++H T I HR+++S +I L E++ KI+DF +K G+
Sbjct: 142 LEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGI------SKKGTELD 193
Query: 646 ELLETSAV-------DLE----------SNVYSFGTILFEMITGR--ISYSIENG--SLE 684
+ ++ V D E S+VYSFG +LFE++ R I S+ +L
Sbjct: 194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 685 NWASEYLKGEQPLKDIVDPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
WA E Q L+ IVDP L + L + C+ + RPSM + KL+
Sbjct: 254 EWAVESHNNGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
Query: 744 ITAME 748
++
Sbjct: 313 ALRLQ 317
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 7e-60
Identities = 81/304 (26%), Positives = 140/304 (46%), Gaps = 42/304 (13%)
Query: 470 SELEAACEDFS--------NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKN 521
EL+ +F N +G +G G VYKG ++ +AV + ++
Sbjct: 18 YELKNVTNNFDERPISVGGNKMG---EGGFGVVYKGYVN-NTTVAVKKLAAMVDIT-TEE 72
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-IQEAEHL 580
L+ QF ++I ++K H+N V L+G+ + + +V+ Y PNGSL + L + L
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT 640
W MR +IA G A + +H+ HR+++S++I L E + AKISDF A+
Sbjct: 131 SWHMRCKIAQGAANGINFLHE--NHHIHRDIKSANILLDEAFTAKISDFGL------ARA 182
Query: 641 GSAAMELLETSAV----------------DLESNVYSFGTILFEMITGR--ISYSIENGS 682
+ + TS + +S++YSFG +L E+ITG + E
Sbjct: 183 SEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 683 LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
L + E E+ ++D +D + +E + V C+H +RP ++ + L+
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 743 EITA 746
E+TA
Sbjct: 303 EMTA 306
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 4e-58
Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 44/293 (15%)
Query: 470 SELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
EL+ A ++FS NI+G G G VYKG L+ G +AV + ++ E QF+
Sbjct: 23 RELQVASDNFSNKNILG---RGGFGKVYKGRLADGTLVAVKRLKEER----TQGGELQFQ 75
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMR 585
+++ +S H+N + L G+C R++V+ Y NGS+ L + LDW R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 586 LRIAMGMAYCLEHMH-QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA- 643
RIA+G A L ++H P I HR++++++I L E++ A + DF AK
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL------AKLMDYK 187
Query: 644 ---------------AMELLETSAVDLESNVYSFGTILFEMITGR--ISYSI----ENGS 682
A E L T +++V+ +G +L E+ITG+ + ++
Sbjct: 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 683 LENWASEYLKGEQPLKDIVDPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSM 734
L +W LK E+ L+ +VD L+ +++ +E+L+ V C P +RP M
Sbjct: 248 LLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 6e-47
Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 35/279 (12%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLSK 535
+F + G ++KG G +I V K DWS F ++ L
Sbjct: 13 NFLTKLNE---NHSGELWKGRWQ-GNDIVV-----KVLKVRDWSTRKSRDFNEECPRLRI 63
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
+H N + ++G C+ ++ + P GSL+ LH +D + ++ A+ MA
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARG 123
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKTGSAA-M--ELLE 649
+ +H L P I L S S+ + ED A+IS + + + + A + E L+
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG--RMYAPAWVAPEALQ 181
Query: 650 TSAVDLESN---VYSFGTILFEMITGRISYS-IENGSLENWASEYLKGEQPLKDIVDPTL 705
D ++SF +L+E++T + ++ + N + + L+G +P
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA--LEGLRP--------- 230
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ + + ++K C++ DP +RP I L+++
Sbjct: 231 -TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 5e-46
Identities = 60/318 (18%), Positives = 117/318 (36%), Gaps = 53/318 (16%)
Query: 470 SELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
L + G G V+K L +AV ++ + W Q
Sbjct: 17 ENLYFQSMPLQLLEVKAR---GRFGCVWKAQLL-NEYVAVKIFPIQDKQSW------QNE 66
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFT--RMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 585
++ +L + H+N + IG + ++ + GSL + L + W
Sbjct: 67 YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNEL 123
Query: 586 LRIAMGMAYCLEHMHQ--------LTPPIAHRNLQSSSIYLTEDYAAKISDFS----FWN 633
IA MA L ++H+ P I+HR+++S ++ L + A I+DF F
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 634 NTTAAKTGSAA-----M--ELLETSA-----VDLESNVYSFGTILFEMITGRISYSIENG 681
+A T M E+LE + L ++Y+ G +L+E+ + +
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
Query: 682 SLENWASEYLKGEQP----LKDIV-----DPTLKS--FQENVLEELLVVIKNCVHPDPKQ 730
E + G+ P ++++V P L+ + + L I+ C D +
Sbjct: 244 EYMLPFEEEI-GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEA 302
Query: 731 RPSMRGIAAKLKEITAME 748
R S + ++ ++ +
Sbjct: 303 RLSAGCVGERITQMQRLT 320
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 7e-46
Identities = 74/295 (25%), Positives = 118/295 (40%), Gaps = 44/295 (14%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQ-----FRKKIDT 532
+ ++G G G V K ++A+ K +ES+ F ++
Sbjct: 11 EVEEVVGR---GAFGVVCKAKWR-AKDVAI------------KQIESESERKAFIVELRQ 54
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMG 591
LS+VNH N V L G C P +V EY+ GSL+ LH E + A + +
Sbjct: 55 LSRVNHPNIVKLYGACLN--PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 592 MAYCLEHMHQLTP-PIAHRNLQSSSIYLTEDY-AAKISDFS---FWNNTTAAKTGSAA-M 645
+ + ++H + P + HR+L+ ++ L KI DF GSAA M
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM 170
Query: 646 --ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703
E+ E S + +V+S+G IL+E+IT R + G G +P
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP------- 223
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSP 758
+N+ + + ++ C DP QRPSM I + + P P P
Sbjct: 224 ---PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 8e-46
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 462 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSS-GVEIAV---TSTSVKSRAD 517
+ +P L +E+E + IG G G V+KG L +A+ + +
Sbjct: 11 SRLPTLADNEIE-----YEKQIGK---GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 518 WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA 577
+ + +F++++ +S +NH N V L G P MV E+ P G L+ L +A
Sbjct: 63 MIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHN--PP--RMVMEFVPCGDLYHRLL-DKA 116
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFS-- 630
+ W+++LR+ + +A +E+M PPI HR+L+S +I+L AK++DF
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
Query: 631 -FWNNTTAAKTGSAA-M--ELL--ETSAVDLESNVYSFGTILFEMITGRISYS-IENGSL 683
++ + G+ M E + E + +++ YSF IL+ ++TG + G +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ +G +P + E+ L VI+ C DPK+RP I +L E
Sbjct: 237 KFINMIREEGLRP----------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
Query: 744 I 744
+
Sbjct: 287 L 287
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 9e-46
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
Query: 468 KRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVK--SRADWSKNLESQ 525
+L IG+ G+ GTV++ G ++AV K D+ ++
Sbjct: 35 PWCDLN-----IKEKIGA---GSFGTVHRAEWH-GSDVAV-----KILMEQDFHAERVNE 80
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA-EHLDWAM 584
F +++ + ++ H N V +G + +V EY GSL+ LH A E LD
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNL--SIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKTG 641
RL +A +A + ++H PPI HRNL+S ++ + + Y K+ DF +T +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 642 SA------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
+A A E+L + +S+VYSFG IL+E+ T + + +L G +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG----NLNPAQVVAAVGFK 254
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ + N+ ++ +I+ C +P +RPS I L+ +
Sbjct: 255 CKR----LEIP---RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 2e-40
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 468 KRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
+EL IIG G G VY+ G E+AV + D S+ +E R
Sbjct: 5 DFAELT-----LEEIIGI---GGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIE-NVR 54
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR 587
++ + + H N + L G C ++ +V E++ G L L + + + +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNL--CLVMEFARGGPLNRVLS---GKRIPPDILVN 109
Query: 588 IAMGMAYCLEHMHQLTP-PIAHRNLQSSSIYLTEDYA--------AKISDF---SFWNNT 635
A+ +A + ++H PI HR+L+SS+I + + KI+DF W+ T
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 636 TA-AKTGSAA-M--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691
T + G+ A M E++ S S+V+S+G +L+E++TG + + ++ A Y
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR----GIDGLAVAYG 225
Query: 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
L + E ++++C +PDP RPS I +L I
Sbjct: 226 VAMNKLA----LPI---PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 1e-39
Identities = 69/302 (22%), Positives = 123/302 (40%), Gaps = 64/302 (21%)
Query: 469 RSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK 528
++ IGS G+ GTVYKG V + + + + F+
Sbjct: 23 DGQIT-----VGQRIGS---GSFGTVYKGKWHGDVAVKM-----LNVTAPTPQQLQAFKN 69
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
++ L K H N + +GY +V ++ SL+ HLH E + + I
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTA-PQL--AIVTQWCEGSSLYHHLHASE-TKFEMKKLIDI 125
Query: 589 AM----GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--------SFWNNTT 636
A GM Y +H I HR+L+S++I+L ED KI DF ++
Sbjct: 126 ARQTARGMDY----LHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 637 AAKTGSA---AMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690
+GS A E++ +++ +S+VY+FG +L+E++TG++ Y
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY-------------- 225
Query: 691 LKGEQPLKDIVD--------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
I++ P L + N + + ++ C+ +RPS I A+++
Sbjct: 226 -SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
Query: 743 EI 744
E+
Sbjct: 285 EL 286
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 50/304 (16%), Positives = 110/304 (36%), Gaps = 61/304 (20%)
Query: 468 KRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
+LE +IG G G VY G E+A+ + +++ F+
Sbjct: 31 PFEQLE-----IGELIGK---GRFGQVYHGRWHG--EVAIR---LIDIERDNEDQLKAFK 77
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR 587
+++ + H+N V +G C ++ +L+ + + LD +
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHL--AIITSLCKGRTLYSVVRDAK-IVLDVNKTRQ 134
Query: 588 IAM----GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----------SFW 632
IA GM Y +H I H++L+S ++ ++ I+DF
Sbjct: 135 IAQEIVKGMGY----LHA--KGILHKDLKSKNV-FYDNGKVVITDFGLFSISGVLQAGRR 187
Query: 633 NNTTAAKTGSAA-M--ELLETSAVDLESN---------VYSFGTILFEMITGRISYSIEN 680
+ + G + E++ + D E + V++ GTI +E+ +
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK--- 244
Query: 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
+ A + G ++ Q + +E+ ++ C + ++RP+ +
Sbjct: 245 -TQPAEAIIWQMGTGMKPNLS-------QIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296
Query: 741 LKEI 744
L+++
Sbjct: 297 LEKL 300
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 74/342 (21%), Positives = 126/342 (36%), Gaps = 78/342 (22%)
Query: 470 SELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFR 527
SE ++ +IG G G VYKG+L +AV S +R ++
Sbjct: 6 SEPSLDLDNLKLLELIGR---GRYGAVYKGSLD-ERPVAVKVFSFANRQNF------INE 55
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTR---MMVFEYSPNGSLFEHLHIQEAEHLDWAM 584
K I + + H N I E R ++V EY PNGSL ++L + DW
Sbjct: 56 KNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVS 112
Query: 585 RLRIAMGMAYCLEHMH-------QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF------ 631
R+A + L ++H P I+HR+L S ++ + D ISDF
Sbjct: 113 SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
Query: 632 --------WNNTTAAKTGSA---AMELLETS-------AVDLESNVYSFGTILFEMITGR 673
+N ++ G+ A E+LE + + + ++Y+ G I +E+ R
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-R 231
Query: 674 ISYSIENGSLENWASEYLKGEQPLKDIV--DPTLKSFQENVLEE---------------- 715
+ S+ EY + + V PT + Q V E
Sbjct: 232 CTDLFPGESVP----EY---QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLA 284
Query: 716 ---LLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754
L I++C D + R + + ++ E+ + +
Sbjct: 285 VRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSV 326
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 63/308 (20%), Positives = 112/308 (36%), Gaps = 53/308 (17%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
IG G G V+ G G ++AV A W +I + H
Sbjct: 41 MVKQIGK---GRYGEVWMGKWR-GEKVAVKVFFTTEEASW------FRETEIYQTVLMRH 90
Query: 539 KNFVNLIGYCEEDEPFTR--MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+N + I + ++ +Y NGSL+++L LD L++A L
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGL 147
Query: 597 EHMH------QLTPPIAHRNLQSSSIYLTEDYAAKISDF-------SFWNNTTAAKTGSA 643
H+H Q P IAHR+L+S +I + ++ I+D S N
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207
Query: 644 ------AMELLETSA--VDLESN----VYSFGTILFEMITGRISYSIENGSLENWASEYL 691
E+L+ S +S +YSFG IL+E+ +S I + L
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY--HDL 265
Query: 692 KGEQP-LKDIVD--------PTL--KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
P +D+ + P+ + + L ++ ++ C +P R + +
Sbjct: 266 VPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325
Query: 741 LKEITAME 748
L +++ +
Sbjct: 326 LAKMSESQ 333
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 3e-36
Identities = 62/304 (20%), Positives = 116/304 (38%), Gaps = 53/304 (17%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
+G G G V++G+ G +AV S + W ++ + H
Sbjct: 12 LLECVGK---GRYGEVWRGSWQ-GENVAVKIFSSRDEKSW------FRETELYNTVMLRH 61
Query: 539 KNFVNLIGYC--EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+N + I ++ Y GSL+++L + LD LRI + +A L
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGL 118
Query: 597 EHMH------QLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAKT 640
H+H Q P IAHR+L+S +I + ++ I+D + + +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 641 GSA---AMELLE--TSAVDLESN----VYSFGTILFEMITGRISYSIENGSLENWASEYL 691
G+ A E+L+ +S +++FG +L+E+ +S I + +
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF--YDV 236
Query: 692 KGEQP-LKDIVD--------PTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
P +D+ P + + F + L L ++K C + +P R + I
Sbjct: 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296
Query: 741 LKEI 744
L +I
Sbjct: 297 LTKI 300
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 9e-36
Identities = 62/321 (19%), Positives = 110/321 (34%), Gaps = 61/321 (19%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQ 525
+ S+L ++G G G K T +G + + K + + +
Sbjct: 7 FRPSDLI-----HGEVLGK---GCFGQAIKVTHRETGEVMVM-----KELIRFDEETQRT 53
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 585
F K++ + + H N + IG +D+ + EY G+L + + W+ R
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRL--NFITEYIKGGTLRGIIKSMD-SQYPWSQR 110
Query: 586 LR----IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------------ 629
+ IA GMAY L M+ I HR+L S + + E+ ++DF
Sbjct: 111 VSFAKDIASGMAY-LHSMN-----IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
Query: 630 --------SFWNNTTAAKTGSA---AMELLETSAVDLESNVYSFGTILFEMITGRISYSI 678
G+ A E++ + D + +V+SFG +L E+I +
Sbjct: 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738
++ P N + C DP++RPS +
Sbjct: 225 YLPRTMDFGLNVRGFLDRYC----P------PNCPPSFFPITVRCCDLDPEKRPSFVKLE 274
Query: 739 AKLKEITAMEPDGATPKLSPL 759
L+ + M G P L
Sbjct: 275 HWLETL-RMHLAGHLPLGPQL 294
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 9e-35
Identities = 65/317 (20%), Positives = 119/317 (37%), Gaps = 71/317 (22%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
IG G G V++G G E+AV S + W +I + H
Sbjct: 46 LQESIGK---GRFGEVWRGKWR-GEEVAVKIFSSREERSW------FREAEIYQTVMLRH 95
Query: 539 KNFVNLIGYCEEDEPFTR--MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+N + I +D +V +Y +GSLF++L+ + +++A+ A L
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGL 152
Query: 597 EHMH------QLTPPIAHRNLQSSSIYLTEDYAAKISDF-------SFWNNTTAAKTGSA 643
H+H Q P IAHR+L+S +I + ++ I+D S + A
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 644 ------AMELLETSAV--DLESN----VYSFGTILFEMITGRISYSIENGSLENWASEYL 691
A E+L+ S ES +Y+ G + +E+ I +Y
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI--------HEDY- 263
Query: 692 KGEQPLKDIV--DPTLKSFQENV------------------LEELLVVIKNCVHPDPKQR 731
+ P D+V DP+++ ++ V L + +++ C + + R
Sbjct: 264 --QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321
Query: 732 PSMRGIAAKLKEITAME 748
+ I L +++ E
Sbjct: 322 LTALRIKKTLSQLSQQE 338
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 8e-28
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 14/151 (9%)
Query: 116 SLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILN 175
S ++ L E L+ F++ + D L WS N NPC++ GV C D KV ++
Sbjct: 5 SPSQSLYREIHQLISFKDVLP-DK-NLLPDWSSNK------NPCTFDGVTCRDDKVTSID 56
Query: 176 LRDLCL---GGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L L ++ L L+ L+S+ L N+ G++ L LDL N+ SGP
Sbjct: 57 LSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGP 115
Query: 233 FPSD--FGNSFSLTTLLLDNNQYLGGISPEL 261
+ G+ L L + +N
Sbjct: 116 VTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 146
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 5e-18
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 167 SDGKVVILNLRDLCLG-----GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 221
+ + L++L L G + P L SEL S+ L N GTIP +G L +L
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
L L N G P + +L TL+LD N G I L
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 6e-18
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L+L L G + LG LS+L+ + L N G IP+E+ +K LE L L FN+ +G
Sbjct: 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
PS N +L + L NN+ G I + L+
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-17
Identities = 28/93 (30%), Positives = 39/93 (41%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L L L G + EL + L+++IL N G IP + L + L N +G
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
P G +L L L NN + G I EL +
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCR 538
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 3e-16
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
++L + L G + +G+L L + L NNSF G IP E+G+ + L LDL N F+G
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWL 277
P+ + + N G + + E + L
Sbjct: 553 TIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 5e-16
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 173 ILNLRDLCLGGMLAPEL-GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L+L + G + L G L + L N F+G +P G LE L L NNFSG
Sbjct: 273 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 332
Query: 232 PFPSD-FGNSFSLTTLLLDNNQYLGGISPEL 261
P D L L L N++ G + L
Sbjct: 333 ELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 7e-16
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
L G + L + L I L NN G IPK IG L+ L IL L N+FSG P++ G+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 241 FSLTTLLLDNNQYLGGISPEL 261
SL L L+ N + G I +
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAM 558
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 7e-16
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 175 NLRDLCLG-----GMLAPELGQLSELKSIILRNNSFFGTIPKE-IGELKELEILDLGFNN 228
L L L G + P G S L+S+ L +N+F G +P + + +++ L++LDL FN
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354
Query: 229 FSGPFPSDFGN-SFSLTTLLLDNNQYLGGISPEL 261
FSG P N S SL TL L +N + G I P L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-15
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L++ + P LG S L+ + + N G + I EL++L++ N F G
Sbjct: 203 EFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG 261
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
P P SL L L N++ G I L
Sbjct: 262 PIPP--LPLKSLQYLSLAENKFTGEIPDFL 289
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-14
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
N+ GG +P + + + N G IPKEIG + L IL+LG N+
Sbjct: 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI 668
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
SG P + G+ L L L +N+ G I +
Sbjct: 669 SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 700
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 2e-14
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 173 ILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELK-ELEILDLGFNNFS 230
L L G L + L ++ LK + L N F G +P+ + L L LDL NNFS
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381
Query: 231 GPFPSDFGNSF--SLTTLLLDNNQYLGGISPEL 261
GP + + +L L L NN + G I P L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 4e-14
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L++ L G + + +ELK + + +N F G IP LK L+ L L N F+G
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTG 283
Query: 232 PFPSD-FGNSFSLTTLLLDNNQYLGGISPEL 261
P G +LT L L N + G + P
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 7e-14
Identities = 21/96 (21%), Positives = 35/96 (36%)
Query: 166 CSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLG 225
K L G+ + +L +LS + + + G + LD+
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640
Query: 226 FNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
+N SG P + G+ L L L +N G I E+
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 676
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 1e-13
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 170 KVVILNLRDLCLGGMLAPEL---GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226
+ +L+L + G ELK + + N G + + LE LD+
Sbjct: 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSS 209
Query: 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
NNFS P G+ +L L + N+ G S +
Sbjct: 210 NNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCT 247
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 5e-13
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
E+G + L + L +N G+IP E+G+L+ L ILDL N G P LT +
Sbjct: 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709
Query: 247 LLDNNQYLGGI 257
L NN G I
Sbjct: 710 DLSNNNLSGPI 720
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 2e-08
Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 6/101 (5%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN--NF 229
+ L+L G + + + S + N G I + N F
Sbjct: 541 IWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEI 270
G + + + Y G SP + +
Sbjct: 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 8e-07
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFS-LTT 245
E+G L L + L +N G IP+ + L L +DL NN SGP P F
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE--MGQFETFPP 731
Query: 246 LLLDNNQYL 254
NN L
Sbjct: 732 AKFLNNPGL 740
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 58/286 (20%)
Query: 479 FSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
F IG G+ TVYKG + VE+A + +K+ +F+++ + L +
Sbjct: 30 FDIEIGR---GSFKTVYKGLDTETTVEVAWCELQDR---KLTKSERQRFKEEAEMLKGLQ 83
Query: 538 HKNFVNLIGYCEEDEPFTRMMVF--EYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMG 591
H N V E + +V E +G+L +L ++ W +I G
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWC--RQILKG 141
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDF--SFWNNTTAAKT--GSA--- 643
+ + +H TPPI HR+L+ +I++T + KI D + + AK G+
Sbjct: 142 LQF----LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFM 197
Query: 644 AMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-----Q 695
A E+ E +VD VY+FG + EM T YS +N A Y +
Sbjct: 198 APEMYEEKYDESVD----VYAFGMCMLEMATSEYPYS----ECQNAAQIYRRVTSGVKPA 249
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ P +K I+ C+ + +R S L
Sbjct: 250 SFDKVAIPEVKEI-----------IEGCIRQNKDERYS----IKDL 280
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 1e-26
Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 43/302 (14%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
++ L+ +G G G V + +VKS + + N +
Sbjct: 18 FEKRFLK-----RIRDLGE---GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD 69
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
+K+I+ L + H+N V G C ED ++ E+ P+GSL E+L I + L
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNN 634
+A ++I GM Y L HR+L + ++ + ++ KI DF
Sbjct: 130 KYA--VQICKGMDY-LGSRQ-----YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 635 TTAAKTGSA------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687
K A E L S + S+V+SFG L E++T S L+
Sbjct: 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIG 241
Query: 688 SEYLKGEQPLKDIVDPTLKSFQ-----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742
+ G+ + +V+ TLK + N +E+ +++ C P R S + + +
Sbjct: 242 PTH--GQMTVTRLVN-TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298
Query: 743 EI 744
+
Sbjct: 299 AL 300
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 37/174 (21%)
Query: 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSD----GKVVIL 174
C + ALL+ ++ + LS W + +W GV C +V L
Sbjct: 2 LCNPQDKQALLQIKKDLGNPT--TLSSWLPTT----DCCNRTWLGVLCDTDTQTYRVNNL 55
Query: 175 NLRDLCLGGMLA---------------------------PELGQLSELKSIILRNNSFFG 207
+L L L P + +L++L + + + + G
Sbjct: 56 DLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG 115
Query: 208 TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
IP + ++K L LD +N SG P + +L + D N+ G I
Sbjct: 116 AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 169
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 2e-14
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
++G L + LRNN +GT+P+ + +LK L L++ FNN G P GN
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVS 296
Query: 247 LLDNNQYLGGI 257
NN+ L G
Sbjct: 297 AYANNKCLCGS 307
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 3e-14
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+ + L G + P L+ L + L N G G K + + L N+ +
Sbjct: 176 FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
G S +L L L NN+ G + L
Sbjct: 235 FDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-25
Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 73/308 (23%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
LK +E + ++GS G GTVYKG E ++K R S +
Sbjct: 12 LKETEFK-----KIKVLGS---GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
+ ++ V++ + L+G C ++ + P G L +++ +I L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
+W ++IA GM Y LE + HR+L + ++ + KI+DF
Sbjct: 121 NWC--VQIAKGMNY-LEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 637 AAKTGSA-------AMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY-SIEN--- 680
A+E + T S+V+S+G ++E++T G Y I
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 681 -GSLENWASEYLKGE---QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
LE KGE QP ++ ++++ C D RP R
Sbjct: 229 SSILE-------KGERLPQP-------------PICTIDVYMIMRKCWMIDADSRPKFRE 268
Query: 737 IAAKLKEI 744
+ + ++
Sbjct: 269 LIIEFSKM 276
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-24
Identities = 81/326 (24%), Positives = 120/326 (36%), Gaps = 68/326 (20%)
Query: 451 GLSGQLQKAFVTGVPK----LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEI 505
L+ + VPK L +L IG G G V+ G L + +
Sbjct: 91 PLTKKSGVVLHRAVPKDKWVLNHEDLV-----LGEQIGR---GNFGEVFSGRLRADNTLV 142
Query: 506 AVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSP 564
AV KS R +L+++F ++ L + +H N V LIG C + +P +V E
Sbjct: 143 AV-----KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI--YIVMELVQ 195
Query: 565 NGSLFEHLHIQEAEHLDWAMRLR----IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620
G L E L L+ A GM Y LE HR+L + + +TE
Sbjct: 196 GGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEY-LESKC-----CIHRDLAARNCLVTE 248
Query: 621 DYAAKISDF----SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEM 669
KISDF + AA G A E L ES+V+SFG +L+E
Sbjct: 249 KNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 670 IT-GRISYSIENGSLENWASEYLKGEQPLKDIVD------PTLKSFQENVLEELLVVIKN 722
+ G Y L +Q + + P E + + +++
Sbjct: 309 FSLGASPY------------PNLSNQQTREFVEKGGRLPCP------ELCPDAVFRLMEQ 350
Query: 723 CVHPDPKQRPSMRGIAAKLKEITAME 748
C +P QRPS I +L+ I
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIRKRH 376
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 41/300 (13%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
+ L+ +G G G V + +VK+ +AD S
Sbjct: 28 FHKRYLK-----KIRDLGE---GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG 79
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL---HIQEAEHLDW 582
++++ID L + H++ + G CE+ + +V EY P GSL ++L I A+ L +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 139
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTT 636
A +I GMAY L H HR+L + ++ L D KI DF +
Sbjct: 140 A--QQICEGMAY-LHAQH-----YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191
Query: 637 AAKTGSA------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689
+ A E L+ S+V+SFG L+E++T S S LE
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA 251
Query: 690 YLKGEQPLKDIVDPTLKSFQ-----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
G+ + + + L+ + + E+ ++KNC + RP+ + LK +
Sbjct: 252 Q--GQMTVLRLTE-LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 52/295 (17%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
++R+++ + +G G G VY+G + V +VK+ + D + +
Sbjct: 217 MERTDIT-----MKHKLGG---GQYGEVYEGVWK-KYSLTV---AVKTLKEDTME--VEE 262
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA-- 583
F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 584 --MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTA 637
M +I+ M Y LE + HRNL + + + E++ K++DF +T
Sbjct: 321 LYMATQISSAMEY-LEKKN-----FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 638 AKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASE 689
A G+ A E L + ++S+V++FG +L+E+ T G Y I+ + +
Sbjct: 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ E+P E E++ +++ C +P RPS I + +
Sbjct: 435 DYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-24
Identities = 60/301 (19%), Positives = 111/301 (36%), Gaps = 42/301 (13%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQF 526
+ L+ + + +G G G+V + +VK + + F
Sbjct: 20 FEERHLK-----YISQLGK---GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71
Query: 527 RKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLD 581
+++I L ++ V G + +V EY P+G L + L + + L
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 582 WAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNT 635
++ +I GM Y L HR+L + +I + + KI+DF +
Sbjct: 132 YS--SQICKGMEY-LGSRR-----CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 636 TAAKTGSA------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688
+ A E L + +S+V+SFG +L+E+ T S S L
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 243
Query: 689 EYLKGEQPLKDIVDPTLKSFQ-----ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
E + L +++ L+ Q E+ ++K C P P+ RPS + +L
Sbjct: 244 E--RDVPALSRLLE-LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 300
Query: 744 I 744
+
Sbjct: 301 L 301
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-23
Identities = 69/294 (23%), Positives = 123/294 (41%), Gaps = 47/294 (15%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 530
E+ +G G G V+ GT + +A+ K+ + + E F ++
Sbjct: 180 EIPRESLRLEVKLGQ---GCFGEVWMGTWNGTTRVAI-----KTLKPGTMSPE-AFLQEA 230
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRL 586
+ K+ H+ V L E EP +V EY GSL + L + ++L M
Sbjct: 231 QVMKKLRHEKLVQLYAVVSE-EPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS 642
+IA GMAY +E M+ HR+L++++I + E+ K++DF +N A+ G+
Sbjct: 288 QIASGMAY-VERMN-----YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341
Query: 643 ------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGE 694
A E ++S+V+SFG +L E+ T GR+ Y + N + + +
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748
P E L ++ C +P++RP+ + A L++
Sbjct: 402 CP-------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 1e-22
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 65/310 (20%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
K +EL ++GS G GTV+KG E +K +
Sbjct: 10 FKETELR-----KLKVLGS---GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 61
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
+ + ++H + V L+G C +V +Y P GSL +H+ + L
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGSSL---QLVTQYLPLGSLLDHVRQHRGALGPQLLL 118
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNT 635
+W ++IA GM Y LE + HRNL + ++ L +++DF ++
Sbjct: 119 NWG--VQIAKGMYY-LEEHG-----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 636 TAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIEN----GSL 683
+ + A+E + +S+V+S+G ++E++T G Y + L
Sbjct: 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
Query: 684 ENWASEYLKGE---QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
E KGE QP + ++ +V+ C D RP+ + +A +
Sbjct: 231 E-------KGERLAQP-------------QICTIDVYMVMVKCWMIDENIRPTFKELANE 270
Query: 741 LKEITAMEPD 750
+ P
Sbjct: 271 FTRMARDPPR 280
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 74/334 (22%), Positives = 124/334 (37%), Gaps = 71/334 (21%)
Query: 436 VCRSSKVVTVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVY 495
R K ++ V + + L EL+ IG G G V
Sbjct: 164 CTRLIKPKVMEGTVAAQDEFYRSGWA-----LNMKELK-----LLQTIGK---GEFGDVM 210
Query: 496 KGTLSSGVEIAVTSTSVKSRADWSKNL-----ESQFRKKIDTLSKVNHKNFVNLIGYCEE 550
G G ++AV K + F + ++++ H N V L+G E
Sbjct: 211 LGDYR-GNKVAV------------KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 551 DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTPPI 606
++ +V EY GSL ++L + L L + M Y LE +
Sbjct: 258 EKGGL-YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY-LEGNN-----F 310
Query: 607 AHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS------AAMELLETSAVDLESNVY 660
HR+L + ++ ++ED AK+SDF ++ + A E L +S+V+
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 661 SFGTILFEMIT-GRISY-SIENGSLENWASEYL-KG---EQPLKDIVDPTLKSFQENVLE 714
SFG +L+E+ + GR+ Y I + + KG + P +
Sbjct: 371 SFGILLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAP-------------DGCPP 413
Query: 715 ELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748
+ V+KNC H D RP+ + +L+ I E
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-22
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 52/319 (16%)
Query: 451 GLSGQLQKAFVTGVPKLKRS-----ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEI 505
GL +L T P+ + E+ +G G G V+ GT + +
Sbjct: 238 GLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQ---GCFGEVWMGTWNGTTRV 294
Query: 506 AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPN 565
A+ K+ + + E F ++ + K+ H+ V L E EP +V EY
Sbjct: 295 AI-----KTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE-EPI--YIVTEYMSK 345
Query: 566 GSLFEHLHIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621
GSL + L + ++L M +IA GMAY +E M+ HR+L++++I + E+
Sbjct: 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMN-----YVHRDLRAANILVGEN 399
Query: 622 YAAKISDF----SFWNNTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT 671
K++DF +N A+ G+ A E ++S+V+SFG +L E+ T
Sbjct: 400 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
Query: 672 -GRISY-SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPK 729
GR+ Y + N + + + P E L ++ C +P+
Sbjct: 460 KGRVPYPGMVNREVLDQVERGYRMPCP-------------PECPESLHDLMCQCWRKEPE 506
Query: 730 QRPSMRGIAAKLKEITAME 748
+RP+ + A L++
Sbjct: 507 ERPTFEYLQAFLEDYFTST 525
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 3e-22
Identities = 64/317 (20%), Positives = 123/317 (38%), Gaps = 81/317 (25%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKNLE 523
+ R ++ + I+G G G VY+G G +I V +VK+ + D + + +
Sbjct: 9 IAREDVV-----LNRILGE---GFFGEVYEGVYTNHKGEKINV---AVKTCKKDCTLDNK 57
Query: 524 SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAE 578
+F + + ++H + V LIG EE EP ++ E P G L +L ++
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT--WIIMELYPYGELGHYLERNKNSLKVLT 114
Query: 579 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNN 634
+ ++ L+I MAY LE ++ HR++ +I + K+ DF +
Sbjct: 115 LVLYS--LQICKAMAY-LESIN-----CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166
Query: 635 TTAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY------- 676
+ + + E + T+A S+V+ F ++E+++ G+ +
Sbjct: 167 DYYKASVTRLPIKWMSPESINFRRFTTA----SDVWMFAVCMWEILSFGKQPFFWLENKD 222
Query: 677 ---SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+E G + L +P + L ++ C DP RP
Sbjct: 223 VIGVLEKG-------DRL--PKP-------------DLCPPVLYTLMTRCWDYDPSDRPR 260
Query: 734 MRGIAAKLKEITAMEPD 750
+ L ++ ME D
Sbjct: 261 FTELVCSLSDVYQMEKD 277
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 4e-22
Identities = 66/305 (21%), Positives = 114/305 (37%), Gaps = 49/305 (16%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
+ L+ F +G G G+V + +VK + ++L
Sbjct: 7 FEERHLK-----FLQQLGK---GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD- 57
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
F ++I+ L + H N V G C ++ EY P GSL ++L I + L
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
+ +I GM Y L HR+L + +I + + KI DF +
Sbjct: 118 QYT--SQICKGMEY-LGTKR-----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 637 AAKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS 688
K E L S + S+V+SFG +L+E+ T Y ++ S
Sbjct: 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFM 225
Query: 689 EYLKGEQPLKDIVDPTLKSFQEN--VLE-------ELLVVIKNCVHPDPKQRPSMRGIAA 739
+ G ++ L +N L E+ +++ C + + QRPS R +A
Sbjct: 226 RMI-GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284
Query: 740 KLKEI 744
++ +I
Sbjct: 285 RVDQI 289
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 5e-22
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 61/318 (19%)
Query: 465 PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS--RADWSK 520
KL+ ++ I+G G G+V +G L G + V +VK+ + S+
Sbjct: 24 NKLEDVVIDRNLLILGKILGE---GEFGSVMEGNLKQEDGTSLKV---AVKTMKLDNSSQ 77
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR---MMVFEYSPNGSLFEHL----H 573
+F + + +H N + L+G C E M++ + G L +L
Sbjct: 78 REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL 137
Query: 574 IQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629
+H+ + IA+GM Y L + + HR+L + + L +D ++DF
Sbjct: 138 ETGPKHIPLQTLLKFMVDIALGMEY-LSNRN-----FLHRDLAARNCMLRDDMTVCVADF 191
Query: 630 ----SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYS 677
++ + A A+E L +S+V++FG ++E+ T G Y
Sbjct: 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY- 250
Query: 678 IENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
++N +YL +QP E+ L+EL ++ +C DP RP
Sbjct: 251 ---PGVQNHEMYDYLLHGHRLKQP-------------EDCLDELYEIMYSCWRTDPLDRP 294
Query: 733 SMRGIAAKLKEITAMEPD 750
+ + +L+++ PD
Sbjct: 295 TFSVLRLQLEKLLESLPD 312
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 6e-22
Identities = 64/308 (20%), Positives = 113/308 (36%), Gaps = 73/308 (23%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
LK +E + ++GS G GTVYKG E ++K R S +
Sbjct: 12 LKETEFK-----KIKVLGS---GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
+ ++ V++ + L+G C ++ + P G L +++ +I L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
+W ++IA GM Y LE + HR+L + ++ + KI+DF
Sbjct: 121 NWC--VQIAKGMNY-LEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172
Query: 637 AAKTGSA-------AMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY-SIEN--- 680
A+E + T S+V+S+G ++E++T G Y I
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 681 -GSLENWASEYLKGE---QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
LE KGE QP ++ +++ C D RP R
Sbjct: 229 SSILE-------KGERLPQP-------------PICTIDVYMIMVKCWMIDADSRPKFRE 268
Query: 737 IAAKLKEI 744
+ + ++
Sbjct: 269 LIIEFSKM 276
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 6e-22
Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 61/292 (20%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKVNHKNF 541
GSF G VY+G V+ + ++K+ S +F + + + N +
Sbjct: 36 GSF-----GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW------------AMRLRIA 589
V L+G + +P +++ E G L +L + M IA
Sbjct: 91 VRLLGVVSQGQPT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGSAAM 645
GMAY L HR+L + + + ED+ KI DF + K G +
Sbjct: 149 DGMAY-LNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 646 -------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW-ASEYLKG--- 693
E L+ S+V+SFG +L+E+ T Y L N ++
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ----GLSNEQVLRFVMEGGL 258
Query: 694 -EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
++P +N + L +++ C +PK RPS I + +KE
Sbjct: 259 LDKP-------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 7e-22
Identities = 66/305 (21%), Positives = 114/305 (37%), Gaps = 49/305 (16%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQ 525
+ L+ F +G G G+V + +VK + ++L
Sbjct: 38 FEERHLK-----FLQQLGK---GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD- 88
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHL 580
F ++I+ L + H N V G C ++ EY P GSL ++L I + L
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
+ +I GM Y L HR+L + +I + + KI DF +
Sbjct: 149 QYT--SQICKGMEY-LGTKR-----YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 637 AAKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS 688
K E L S + S+V+SFG +L+E+ T Y ++ S
Sbjct: 201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFM 256
Query: 689 EYLKGEQPLKDIVDPTLKSFQEN--VLE-------ELLVVIKNCVHPDPKQRPSMRGIAA 739
+ G ++ L +N L E+ +++ C + + QRPS R +A
Sbjct: 257 RMI-GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315
Query: 740 KLKEI 744
++ +I
Sbjct: 316 RVDQI 320
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 7e-22
Identities = 66/322 (20%), Positives = 118/322 (36%), Gaps = 69/322 (21%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST-SVKSRADWSKNL 522
V +KR ++ +G G G V+ + +VK+ D +
Sbjct: 9 VQHIKRRDIV-----LKRELGE---GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA 60
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 582
F+++ + L+ + H++ V G C + +P +MVFEY +G L + L + +
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 583 A------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 624
+ +IA GM Y L H HR+L + + + +
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVY-LASQH-----FVHRDLATRNCLVGANLLV 172
Query: 625 KISDF----SFWNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-G 672
KI DF ++ G + E + ES+V+SFG IL+E+ T G
Sbjct: 173 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYG 232
Query: 673 RISYSIENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 727
+ + L N E + E+P +E+ V+ C +
Sbjct: 233 KQPWF----QLSNTEVIECITQGRVLERP-------------RVCPKEVYDVMLGCWQRE 275
Query: 728 PKQRPSMRGIAAKLKEITAMEP 749
P+QR +++ I L + P
Sbjct: 276 PQQRLNIKEIYKILHALGKATP 297
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 8e-22
Identities = 67/325 (20%), Positives = 128/325 (39%), Gaps = 65/325 (20%)
Query: 451 GLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVT 508
G+S +L+ KL+ + ++G G G+V + L G + V
Sbjct: 6 GISDELK-------EKLEDVLIPEQQFTLGRMLGK---GEFGSVREAQLKQEDGSFVKVA 55
Query: 509 STSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR----MMVFEYSP 564
+K+ + + +F ++ + + +H + L+G R M++ +
Sbjct: 56 VKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMK 114
Query: 565 NGSLFEHL----HIQEAEHLDWA----MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616
+G L L + +L + IA GM Y L + HR+L + +
Sbjct: 115 HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY-LSSRN-----FIHRDLAARNC 168
Query: 617 YLTEDYAAKISDF----SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTI 665
L ED ++DF ++ + ++ A+E L + + S+V++FG
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 666 LFEMIT-GRISYSIENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVV 719
++E++T G+ Y+ +EN YL G +QP +EE+ +
Sbjct: 229 MWEIMTRGQTPYA----GIENAEIYNYLIGGNRLKQP-------------PECMEEVYDL 271
Query: 720 IKNCVHPDPKQRPSMRGIAAKLKEI 744
+ C DPKQRPS + +L+ I
Sbjct: 272 MYQCWSADPKQRPSFTCLRMELENI 296
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-21
Identities = 72/294 (24%), Positives = 118/294 (40%), Gaps = 48/294 (16%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQF 526
L EL+ IG G G V G G ++AV +K+ A F
Sbjct: 18 LNMKELK-----LLQTIGK---GEFGDVMLGDYR-GNKVAVKC--IKNDAT-----AQAF 61
Query: 527 RKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA--- 583
+ ++++ H N V L+G E++ +V EY GSL ++L + L
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGL-YIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 584 -MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS 642
L + M Y LE + HR+L + ++ ++ED AK+SDF ++ +
Sbjct: 121 KFSLDVCEAMEY-LEGNN-----FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174
Query: 643 ------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEYLKGE 694
A E L +S+V+SFG +L+E+ + GR+ Y I + + K +
Sbjct: 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 234
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748
P + + V+KNC H D RPS + +L+ I E
Sbjct: 235 AP-------------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 2e-21
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 48/297 (16%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 530
E+ +G+ G G V+ T + ++AV K+ S ++E F +
Sbjct: 184 EIPRESLKLEKKLGA---GQFGEVWMATYNKHTKVAV-----KTMKPGSMSVE-AFLAEA 234
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRL 586
+ + + H V L + EP ++ E+ GSL + L E
Sbjct: 235 NVMKTLQHDKLVKLHAVVTK-EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS 642
+IA GMA+ +E + HR+L++++I ++ KI+DF +N A+ G+
Sbjct: 292 QIAEGMAF-IEQRN-----YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345
Query: 643 ------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISYS-IENGSLENWASEYLKGE 694
A E + + ++S+V+SFG +L E++T GRI Y + N + +
Sbjct: 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 405
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI-TAMEPD 750
+P EN EEL ++ C P++RP+ I + L + TA E
Sbjct: 406 RP-------------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 3e-21
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 55/291 (18%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVN 537
+IG G G VY G + ++KS F ++ + +N
Sbjct: 25 SDRVIGK---GHFGVVYHGEYIDQAQ-NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGM 592
H N + LIG E ++ Y +G L + + + + + + L++A GM
Sbjct: 81 HPNVLALIGIMLPPEG-LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG--LQVARGM 137
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGSAAM-- 645
Y L HR+L + + L E + K++DF + + A
Sbjct: 138 EY-LAEQK-----FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 646 ------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW-ASEYLKG---- 693
E L+T +S+V+SFG +L+E++T G Y ++ + + +L
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY----RHIDPFDLTHFLAQGRRL 247
Query: 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
QP E + L V++ C DP RP+ R + ++++I
Sbjct: 248 PQP-------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 63/314 (20%), Positives = 114/314 (36%), Gaps = 74/314 (23%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLES 524
+ +L +G G+ G V +G SG ++V +K
Sbjct: 15 IGEKDLR-----LLEKLGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 66
Query: 525 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEH 579
F ++++ + ++H+N + L G P MV E +P GSL + L H
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLT-PPM--KMVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 580 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWN 633
+A +++A GM Y LE HR+L + ++ L KI DF +
Sbjct: 124 SRYA--VQVAEGMGY-LESKR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
Query: 634 NTTAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY-SIEN- 680
+ + A E L+ + A S+ + FG L+EM T G+ + +
Sbjct: 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHA----SDTWMFGVTLWEMFTYGQEPWIGLNGS 231
Query: 681 ---GSLENWASEYLKGE---QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
++ +GE +P E+ +++ V+ C P+ RP+
Sbjct: 232 QILHKIDK------EGERLPRP-------------EDCPQDIYNVMVQCWAHKPEDRPTF 272
Query: 735 RGIAAKLKEITAME 748
+ L E +
Sbjct: 273 VALRDFLLEAQPTD 286
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 7e-21
Identities = 68/322 (21%), Positives = 127/322 (39%), Gaps = 68/322 (21%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST-SVKSRADWSKNL 522
V +KR ++ +G G G V+ + + +VK+ + S++
Sbjct: 35 VHHIKRRDIV-----LKWELGE---GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA 86
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAEHL 580
F+++ + L+ + H++ V G C E P +MVFEY +G L L H +A+ L
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 581 DWA---------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625
+ ++A GM Y L +H HR+L + + + + K
Sbjct: 145 AGGEDVAPGPLGLGQLLAVASQVAAGMVY-LAGLH-----FVHRDLATRNCLVGQGLVVK 198
Query: 626 ISDFSF----WNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GR 673
I DF ++ G + E + ES+V+SFG +L+E+ T G+
Sbjct: 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
Query: 674 ISYSIENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDP 728
+ L N A + + E+P E+ +++ C +P
Sbjct: 259 QPWY----QLSNTEAIDCITQGRELERP-------------RACPPEVYAIMRGCWQREP 301
Query: 729 KQRPSMRGIAAKLKEITAMEPD 750
+QR S++ + A+L+ + P
Sbjct: 302 QQRHSIKDVHARLQALAQAPPV 323
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 9e-21
Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 69/301 (22%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL------ES 524
++ + F IGS G G V+ G + ++A+ K + E
Sbjct: 4 VIDPSELTFVQEIGS---GQFGLVHLGYWLNKDKVAI------------KTIREGAMSEE 48
Query: 525 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEH 579
F ++ + + K++H V L G C E P +V E+ +G L ++L
Sbjct: 49 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPI--CLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 580 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNT 635
L L + GMAY LE + HR+L + + + E+ K+SDF ++
Sbjct: 107 LGMC--LDVCEGMAY-LEEAC-----VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158
Query: 636 TAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSL 683
+ TG+ A+ E+ +S S+V+SFG +++E+ + G+I Y + N +
Sbjct: 159 YTSSTGTKFPVKWASPEVFSFSRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
Query: 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
S + +P + ++ +C P+ RP+ + +L E
Sbjct: 215 VEDISTGFRLYKP-------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261
Query: 744 I 744
I
Sbjct: 262 I 262
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 9e-21
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 71/315 (22%)
Query: 465 PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKS-RADWSKNL 522
P L ++++ F ++IG G G V K + G+ + ++K + SK+
Sbjct: 20 PVLDWNDIK-----FQDVIGE---GNFGQVLKARIKKDGLRMDA---AIKRMKEYASKDD 68
Query: 523 ESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 581
F +++ L K+ +H N +NL+G CE + EY+P+G+L + L D
Sbjct: 69 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETD 126
Query: 582 WA------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623
A +A GM Y L HR+L + +I + E+Y
Sbjct: 127 PAFAIANSTASTLSSQQLLHFAADVARGMDY-LSQKQ-----FIHRDLAARNILVGENYV 180
Query: 624 AKISDFSFWNNTTAAKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRI 674
AKI+DF + E L S S+V+S+G +L+E+++ G
Sbjct: 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 675 SY-SIENGSLENWASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPK 729
Y + L E L E+P N +E+ +++ C P
Sbjct: 241 PYCGMTCAEL----YEKLPQGYRLEKP-------------LNCDDEVYDLMRQCWREKPY 283
Query: 730 QRPSMRGIAAKLKEI 744
+RPS I L +
Sbjct: 284 ERPSFAQILVSLNRM 298
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 63/317 (19%), Positives = 122/317 (38%), Gaps = 90/317 (28%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL---- 522
LKR E+ +GS G G V G ++AV K +
Sbjct: 5 LKREEIT-----LLKELGS---GQFGVVKLGKWKGQYDVAV------------KMIKEGS 44
Query: 523 --ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL 580
E +F ++ T+ K++H V G C ++ P +V EY NG L +L + L
Sbjct: 45 MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLR-SHGKGL 101
Query: 581 DWA----MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFW 632
+ + M + GMA+ LE HR+L + + + D K+SDF
Sbjct: 102 EPSQLLEMCYDVCEGMAF-LESHQ-----FIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155
Query: 633 NNTTAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY----- 676
++ + G+ +A E+ +S S+V++FG +++E+ + G++ Y
Sbjct: 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSK----SDVWAFGILMWEVFSLGKMPYDLYTN 211
Query: 677 -----SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731
+ G L +P + + ++ +C H P++R
Sbjct: 212 SEVVLKVSQG-------HRL--YRP-------------HLASDTIYQIMYSCWHELPEKR 249
Query: 732 PSMRGIAAKLKEITAME 748
P+ + + + ++ + +
Sbjct: 250 PTFQQLLSSIEPLREKD 266
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 1e-20
Identities = 57/310 (18%), Positives = 117/310 (37%), Gaps = 79/310 (25%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL------ES 524
E++ F +G+ G G V G ++A+ K + E
Sbjct: 20 EIDPKDLTFLKELGT---GQFGVVKYGKWRGQYDVAI------------KMIKEGSMSED 64
Query: 525 QFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEH 579
+F ++ + ++H+ V L G C + P ++ EY NG L +L Q +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLREMRHRFQTQQL 122
Query: 580 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNT 635
L+ M + M Y LE HR+L + + + + K+SDF ++
Sbjct: 123 LE--MCKDVCEAMEY-LESKQ-----FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 636 TAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 684
+ GS + E+L +S S++++FG +++E+ + G++ Y
Sbjct: 175 YTSSVGSKFPVRWSPPEVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPY-------- 222
Query: 685 NWASEYLKGEQPLKDIVD------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738
E + + I P E++ ++ +C H +RP+ + +
Sbjct: 223 ----ERFTNSETAEHIAQGLRLYRP------HLASEKVYTIMYSCWHEKADERPTFKILL 272
Query: 739 AKLKEITAME 748
+ + ++ E
Sbjct: 273 SNILDVMDEE 282
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 64/322 (19%)
Query: 450 TGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAV 507
+ L+ +L +A V + F+ +IG G G VY GTL + G +I
Sbjct: 5 SALNPELVQAVQHVVIGPSSLIVH-----FNEVIGR---GHFGCVYHGTLLDNDGKKIHC 56
Query: 508 TSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNG 566
+VKS SQF + + +H N ++L+G C E + ++V Y +G
Sbjct: 57 ---AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHG 112
Query: 567 SLFEHL-----HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621
L + + + + + L++A GM Y L HR+L + + L E
Sbjct: 113 DLRNFIRNETHNPTVKDLIGFG--LQVAKGMKY-LASKK-----FVHRDLAARNCMLDEK 164
Query: 622 YAAKISDFS-----FWNNTTAAKTGSAAM--------ELLETSAVDLESNVYSFGTILFE 668
+ K++DF + + + A E L+T +S+V+SFG +L+E
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 224
Query: 669 MIT-GRISYSIENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKN 722
++T G Y + + + YL QP E + L V+
Sbjct: 225 LMTRGAPPYP----DVNTFDITVYLLQGRRLLQP-------------EYCPDPLYEVMLK 267
Query: 723 CVHPDPKQRPSMRGIAAKLKEI 744
C HP + RPS + +++ I
Sbjct: 268 CWHPKAEMRPSFSELVSRISAI 289
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 2e-20
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 47/299 (15%)
Query: 463 GVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKN 521
G P + E+E + +G G G VY+G + V +VK+ + D +
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGG---GQYGEVYEGVWK-KYSLTV---AVKTLKEDTME- 52
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 581
+F K+ + ++ H N V L+G C + PF ++ E+ G+L ++L + +
Sbjct: 53 -VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVS 109
Query: 582 WA----MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWN 633
M +I+ M Y LE + HR+L + + + E++ K++DF
Sbjct: 110 AVVLLYMATQISSAMEY-LEKKN-----FIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163
Query: 634 NTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLEN 685
+T A G+ A E L + ++S+V++FG +L+E+ T G Y I+ +
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
Query: 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ + E+P E E++ +++ C +P RPS I + +
Sbjct: 224 LLEKDYRMERP-------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-20
Identities = 69/301 (22%), Positives = 120/301 (39%), Gaps = 59/301 (19%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKNLESQFR 527
+ F+ +IG G G VY GTL + G +I +VKS SQF
Sbjct: 85 GPSSLIVHFNEVIGR---GHFGCVYHGTLLDNDGKKIHC---AVKSLNRITDIGEVSQFL 138
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDW 582
+ + +H N ++L+G C E + ++V Y +G L + + + + +
Sbjct: 139 TEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS-----FWNNTTA 637
L++A GM + L HR+L + + L E + K++DF + +
Sbjct: 198 G--LQVAKGMKF-LASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
Query: 638 AKTGSAAM--------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW-A 687
+ A E L+T +S+V+SFG +L+E++T G Y + +
Sbjct: 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----DVNTFDI 305
Query: 688 SEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ YL QP E + L V+ C HP + RPS + +++
Sbjct: 306 TVYLLQGRRLLQP-------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352
Query: 744 I 744
I
Sbjct: 353 I 353
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 2e-20
Identities = 66/315 (20%), Positives = 119/315 (37%), Gaps = 81/315 (25%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKNLE 523
++R +E IG G G V++G +AV ++K+ + S ++
Sbjct: 12 IQRERIE-----LGRCIGE---GQFGDVHQGIYMSPENPALAV---AIKTCKNCTSDSVR 60
Query: 524 SQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAE 578
+F ++ T+ + +H + V LIG E P ++ E G L L + A
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITE-NPV--WIIMELCTLGELRSFLQVRKYSLDLAS 117
Query: 579 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNN 634
+ +A +++ +AY LE HR++ + ++ ++ + K+ DF ++
Sbjct: 118 LILYA--YQLSTALAY-LESKR-----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169
Query: 635 TTAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY------- 676
T + A E + TSA S+V+ FG ++E++ G +
Sbjct: 170 TYYKASKGKLPIKWMAPESINFRRFTSA----SDVWMFGVCMWEILMHGVKPFQGVKNND 225
Query: 677 ---SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
IENG E L P N L ++ C DP +RP
Sbjct: 226 VIGRIENG-------ERL--PMP-------------PNCPPTLYSLMTKCWAYDPSRRPR 263
Query: 734 MRGIAAKLKEITAME 748
+ A+L I E
Sbjct: 264 FTELKAQLSTILEEE 278
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 3e-20
Identities = 63/313 (20%), Positives = 117/313 (37%), Gaps = 68/313 (21%)
Query: 465 PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKN 521
P + E++ + IG G G V++G +AV ++K+ + S +
Sbjct: 380 PSTRDYEIQRERIELGRCIGE---GQFGDVHQGIYMSPENPAMAV---AIKTCKNCTSDS 433
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQE 576
+ +F ++ T+ + +H + V LIG E P ++ E G L L +
Sbjct: 434 VREKFLQEALTMRQFDHPHIVKLIGVITE-NPV--WIIMELCTLGELRSFLQVRKFSLDL 490
Query: 577 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFW 632
A + +A +++ +AY LE HR++ + ++ ++ + K+ DF
Sbjct: 491 ASLILYA--YQLSTALAY-LESKR-----FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
Query: 633 NNTTAAKTGS------AAMELLETSAVDLESNVYSFGTILFEMIT-GRISY--------- 676
++T + A E + S+V+ FG ++E++ G +
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 677 -SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
IENG E L P N L ++ C DP +RP
Sbjct: 603 GRIENG-------ERL--PMP-------------PNCPPTLYSLMTKCWAYDPSRRPRFT 640
Query: 736 GIAAKLKEITAME 748
+ A+L I E
Sbjct: 641 ELKAQLSTILEEE 653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-20
Identities = 65/334 (19%), Positives = 108/334 (32%), Gaps = 107/334 (32%)
Query: 465 PKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL---SSGVEIAVTSTSVKSRADWSKN 521
K++ +L F+ +G GT ++KG ++ T +K +N
Sbjct: 3 HKIRNEDLI-----FNESLGQ---GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN 54
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQE 576
F + +SK++HK+ V G C + ++V E+ GSL +L I
Sbjct: 55 YSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN--ILVQEFVKFGSLDTYLKKNKNCINI 112
Query: 577 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNL--------QSSSIYLTEDYAAKISD 628
L+ A ++A M + LE + H N+ + K+SD
Sbjct: 113 LWKLEVA--KQLAAAMHF-LEENT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 629 F----------------------SFWNN---TTAAKTGSAAMELLETSAVDLESNVYSFG 663
N A ++ +SFG
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLA-------------------TDKWSFG 205
Query: 664 TILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN--VLE-----EL 716
T L+E+ + G++PL + F E+ L EL
Sbjct: 206 TTLWEICS--------------------GGDKPLSALDSQRKLQFYEDRHQLPAPKAAEL 245
Query: 717 LVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750
+I NC+ +P RPS R I L + PD
Sbjct: 246 ANLINNCMDYEPDHRPSFRAIIRDLNSL--FTPD 277
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 4e-20
Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 72/307 (23%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRKK 529
E+ +C +IG+ G G VYKG L + ++K+ +A +++ F +
Sbjct: 40 EIHPSCVTRQKVIGA---GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE 96
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAM 584
+ + +H N + L G + +P M++ EY NG+L + L + +
Sbjct: 97 AGIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGML- 153
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF------WNNTTAA 638
IA GM Y L +M+ HR+L + +I + + K+SDF T
Sbjct: 154 -RGIAAGMKY-LANMN-----YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 206
Query: 639 KTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY----------S 677
+G A E + TSA S+V+SFG +++E++T G Y +
Sbjct: 207 TSGGKIPIRWTAPEAISYRKFTSA----SDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262
Query: 678 IENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
I +G L P + + ++ C + +RP I
Sbjct: 263 INDG-------FRL--PTP-------------MDCPSAIYQLMMQCWQQERARRPKFADI 300
Query: 738 AAKLKEI 744
+ L ++
Sbjct: 301 VSILDKL 307
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 5e-20
Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 73/295 (24%)
Query: 482 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
+GS G GTV KG V V +K+ A+ L+ + + + + ++++
Sbjct: 24 ELGS---GNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPY 79
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRLRIAMGMAYCL 596
V +IG CE E + M+V E + G L ++L H+++ ++ +++MGM Y L
Sbjct: 80 IVRMIGICEA-ESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKY-L 133
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGS------AA 644
E + HR+L + ++ L + AKISDF N A+T A
Sbjct: 134 EESN-----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 645 MELLE----TSAVDLESNVYSFGTILFEMIT-GRISY----------SIENGSLENWASE 689
E + +S S+V+SFG +++E + G+ Y +E G E
Sbjct: 189 PECINYYKFSSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-------E 237
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ P E+ ++ C D + RP + +L+
Sbjct: 238 RM--GCP-------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 5e-20
Identities = 53/300 (17%), Positives = 102/300 (34%), Gaps = 50/300 (16%)
Query: 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
G F V L G A+ + D + +++ D NH N +
Sbjct: 40 GGF-----SYVDLVEGLHDGHFYALKRILCHEQQD-----REEAQREADMHRLFNHPNIL 89
Query: 543 NLIGYCEEDEPFTRM--MVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYCLEH 598
L+ YC + ++ + G+L+ + + L L + +G+ LE
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSA------ 652
+H AHR+L+ ++I L ++ + D N GS L+ A
Sbjct: 150 IHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 653 ---------------VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQP 696
+D ++V+S G +L+ M+ G Y + ++ A P
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKL 756
L + + + DP QRP + + ++L+ + P T ++
Sbjct: 268 QSPRHSSALWQL-----------LNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQI 316
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 6e-20
Identities = 72/323 (22%), Positives = 120/323 (37%), Gaps = 78/323 (24%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKNLESQFR 527
E+EA+ IIGS G G V G L ++ V ++K+ +A +++ F
Sbjct: 45 EIEASRIHIEKIIGS---GDSGEVCYGRLRVPGQRDVPV---AIKALKAGYTERQRRDFL 98
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDW 582
+ + + +H N + L G M+V EY NGSL L + +
Sbjct: 99 SEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAA 638
+ GM Y L + HR+L + ++ + + K+SDF ++ AA
Sbjct: 157 L--RGVGAGMRY-LSDLG-----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 639 KTGSAAM--------ELLE----TSAVDLESNVYSFGTILFEMIT-GRISY--------- 676
T + E + +SA S+V+SFG +++E++ G Y
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSA----SDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 677 -SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
S+E G L P L ++ +C H D QRP
Sbjct: 265 SSVEEG-------YRL--PAP-------------MGCPHALHQLMLDCWHKDRAQRPRFS 302
Query: 736 GIAAKLKEI-TAMEPDGATPKLS 757
I + L + + E AT +S
Sbjct: 303 QIVSVLDALIRSPESLRATATVS 325
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 1e-19
Identities = 57/293 (19%), Positives = 112/293 (38%), Gaps = 71/293 (24%)
Query: 483 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKVNHKN 540
+G G G+V +G +I V ++K + K + ++ + ++++
Sbjct: 18 LGC---GNFGSVRQGVYRMRKKQIDV---AIKVLKQGTEKADTEEMMREAQIMHQLDNPY 71
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRIAMGMAYC 595
V LIG C+ E M+V E + G L + L I + + +++MGM Y
Sbjct: 72 IVRLIGVCQA-EAL--MLVMEMAGGGPLHKFLVGKREEIPVSNVAELL--HQVSMGMKY- 125
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAKTGS------A 643
LE + HR+L + ++ L + AKISDF ++ A++
Sbjct: 126 LEEKN-----FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 644 AMELLE----TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG----- 693
A E + +S S+V+S+G ++E ++ G+ Y ++ E +
Sbjct: 181 APECINFRKFSSR----SDVWSYGVTMWEALSYGQKPY----KKMKG--PEVMAFIEQGK 230
Query: 694 --EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E P EL ++ +C + RP + +++
Sbjct: 231 RMECP-------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 1e-19
Identities = 59/317 (18%), Positives = 119/317 (37%), Gaps = 70/317 (22%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKN 521
+ ++ S + F +G G VYKG L T ++K+ +
Sbjct: 3 LKEISLSAVR-----FMEELGE---DRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP 54
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLD 581
L +FR + +++ H N V L+G +D+P M+F Y +G L E L ++
Sbjct: 55 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDV 112
Query: 582 WA------------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623
+ + +IA GM Y L H + H++L + ++ + +
Sbjct: 113 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEY-LSSHH-----VVHKDLATRNVLVYDKLN 166
Query: 624 AKISDF----SFWNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT- 671
KISD + G++ + E + ++S+++S+G +L+E+ +
Sbjct: 167 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
Query: 672 GRISYSIENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHP 726
G Y N E ++ P ++ + ++ C +
Sbjct: 227 GLQPYC----GYSNQDVVEMIRNRQVLPCP-------------DDCPAWVYALMIECWNE 269
Query: 727 DPKQRPSMRGIAAKLKE 743
P +RP + I ++L+
Sbjct: 270 FPSRRPRFKDIHSRLRA 286
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-19
Identities = 65/313 (20%), Positives = 113/313 (36%), Gaps = 64/313 (20%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGV-EIAVTSTSVKS-RADWSKN 521
+ ++ R + +G G G VY+G +S + + +VK+ S+
Sbjct: 24 LKEVPRKNIT-----LIRGLGH---GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 75
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQE 576
E F + +SK NH+N V IG + P ++ E G L L +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPR--FILMELMAGGDLKSFLRETRPRPSQ 133
Query: 577 AEHLDW----AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF 629
L + IA G Y LE H HR++ + + LT AKI DF
Sbjct: 134 PSSLAMLDLLHVARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 630 SF----WNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISYS 677
+ + K G A + E +++ +SFG +L+E+ + G + Y
Sbjct: 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 247
Query: 678 IENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
S N E++ + P +N + ++ C P+ RP
Sbjct: 248 ----SKSNQEVLEFVTSGGRMDPP-------------KNCPGPVYRIMTQCWQHQPEDRP 290
Query: 733 SMRGIAAKLKEIT 745
+ I +++ T
Sbjct: 291 NFAIILERIEYCT 303
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 2e-19
Identities = 69/301 (22%), Positives = 121/301 (40%), Gaps = 70/301 (23%)
Query: 484 GSFSDGTVGTVYKGT---LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NH 538
G+F G V + + +VK + D ++ S +++ + + H
Sbjct: 46 GAF-----GQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--------------HIQEAEHLDW-- 582
KN +NL+G C +D P ++ EY+ G+L E+L + E + +
Sbjct: 101 KNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 583 --AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
+ ++A GM Y L HR+L + ++ +TE+ KI+DF N
Sbjct: 159 LVSCTYQLARGMEY-LASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 637 AAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWA 687
KT + A E L +S+V+SFG +++E+ T G Y I L
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL---- 268
Query: 688 SEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ LK ++P N EL +++++C H P QRP+ + + L
Sbjct: 269 FKLLKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 744 I 744
I
Sbjct: 316 I 316
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 2e-19
Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 56/301 (18%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKI 530
E+ +G+ G G V+ G + ++AV S +K + F +
Sbjct: 9 EVPRETLKLVERLGA---GQFGEVWMGYYNGHTKVAVKS--LKQGS----MSPDAFLAEA 59
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA----MRL 586
+ + ++ H+ V L + EP ++ EY NGSL + L L M
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ-EPI--YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS 642
+IA GMA+ +E + HR+L++++I +++ + KI+DF +N A+ G+
Sbjct: 117 QIAEGMAF-IEERN-----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 643 ------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWASEY 690
A E + T S+V+SFG +L E++T GRI Y + N +
Sbjct: 171 KFPIKWTAPEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
Query: 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI-TAMEP 749
+ +P +N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 227 YRMVRP-------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273
Query: 750 D 750
Sbjct: 274 Q 274
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 3e-19
Identities = 71/308 (23%), Positives = 118/308 (38%), Gaps = 79/308 (25%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKVNHKNF 541
G F G V K T A +T +VK + + S + + + L +VNH +
Sbjct: 34 GEF-----GKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----------------------------H 573
+ L G C +D P +++ EY+ GSL L
Sbjct: 89 IKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 574 IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---- 629
+ + + +A +I+ GM Y L M + HR+L + +I + E KISDF
Sbjct: 147 LTMGDLISFA--WQISQGMQY-LAEMK-----LVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 630 SFWNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIEN 680
+ + K + E L +S+V+SFG +L+E++T G Y I
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 681 GSLENWASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
L LK E+P +N EE+ ++ C +P +RP
Sbjct: 259 ERL----FNLLKTGHRMERP-------------DNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 737 IAAKLKEI 744
I+ L+++
Sbjct: 302 ISKDLEKM 309
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-19
Identities = 70/301 (23%), Positives = 122/301 (40%), Gaps = 70/301 (23%)
Query: 484 GSFSDGTVGTVYKGT---LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NH 538
G+F G V L VT +VK ++D ++ S +++ + + H
Sbjct: 80 GAF-----GQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----------HIQEAEHLDWAMRLR- 587
KN +NL+G C +D P ++ EY+ G+L E+L + + + + +
Sbjct: 135 KNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 588 -------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTT 636
+A GM Y L HR+L + ++ +TED KI+DF +
Sbjct: 193 LVSCAYQVARGMEY-LASKK-----CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 246
Query: 637 AAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWA 687
KT + + E L +S+V+SFG +L+E+ T G Y + L
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL---- 302
Query: 688 SEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ LK ++P N EL +++++C H P QRP+ + + L
Sbjct: 303 FKLLKEGHRMDKP-------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 744 I 744
I
Sbjct: 350 I 350
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 3e-19
Identities = 65/310 (20%), Positives = 115/310 (37%), Gaps = 75/310 (24%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKV-NHKN 540
G+F G V + T ++ T +VK + ++ LS + NH N
Sbjct: 34 GAF-----GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----------------------HIQEAE 578
VNL+G C P +++ EY G L L + +
Sbjct: 89 IVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 579 HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNN 634
L ++ ++A GMA+ L + HR+L + +I LT KI DF N+
Sbjct: 147 LLSFS--YQVAKGMAF-LASKN-----CIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 635 TTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 686
+ G+A A E + ES+V+S+G L+E+ + G Y +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP----GMPVD 254
Query: 687 AS--EYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
+ + +K P E+ E+ ++K C DP +RP+ + I
Sbjct: 255 SKFYKMIKEGFRMLSP-------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301
Query: 741 LKEITAMEPD 750
+++ + +
Sbjct: 302 IEKQISESTN 311
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 3e-19
Identities = 60/317 (18%), Positives = 118/317 (37%), Gaps = 73/317 (23%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKV 536
+ IG G G V++ + + +VK + + S ++++ F+++ +++
Sbjct: 51 YVRDIGE---GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA------------- 583
++ N V L+G C +P ++FEY G L E L +
Sbjct: 108 DNPNIVKLLGVCAVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 584 -------------MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF- 629
+ ++A GMAY L HR+L + + + E+ KI+DF
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAY-LSERK-----FVHRDLATRNCLVGENMVVKIADFG 219
Query: 630 ---SFWNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSI 678
+ ++ G+ A+ E + + ES+V+++G +L+E+ + G Y
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY- 278
Query: 679 ENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+ + Y++ P EN EL +++ C P RPS
Sbjct: 279 ---GMAHEEVIYYVRDGNILACP-------------ENCPLELYNLMRLCWSKLPADRPS 322
Query: 734 MRGIAAKLKEITAMEPD 750
I L+ +
Sbjct: 323 FCSIHRILQRMCERAEG 339
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 7e-19
Identities = 46/295 (15%), Positives = 101/295 (34%), Gaps = 56/295 (18%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
DF I +G G G V++ + ++ + +++ L+
Sbjct: 5 TDFEPIQCLGR---GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---EKVMREVKALA 58
Query: 535 KVNHKNFVNLIGYCEEDEPFTRM----------MVFEYSPNGSLFEHLHIQE-AEHLDWA 583
K+ H V E ++ + + +L + ++ + E + +
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 584 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAK 639
+ L I + +A +E +H + HR+L+ S+I+ T D K+ DF + +
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 640 TGSAAM-----------------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS 682
+ E + ++ + +++S G ILFE++ S +E
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-PFSTQMERVR 235
Query: 683 LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L D+ + V++++ + P P +RP I
Sbjct: 236 T-------------LTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI 277
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 9e-19
Identities = 63/306 (20%), Positives = 117/306 (38%), Gaps = 73/306 (23%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST----SVKSRADWSKNLESQFRKKIDTLSKV-NH 538
G+F G V + T + +KS A + + ++ +S + H
Sbjct: 57 GAF-----GKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQH 109
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL------------------HIQEAEHL 580
+N VNL+G C P +++ EY G L L + L
Sbjct: 110 ENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 581 DWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTT 636
++ ++A GMA+ L + HR++ + ++ LT + AKI DF N++
Sbjct: 168 HFS--SQVAQGMAF-LASKN-----CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 637 AAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW-A 687
G+A A E + ++S+V+S+G +L+E+ + G Y G L N
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP---GILVNSKF 276
Query: 688 SEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ +K QP + + +++ C +P RP+ + I + L+E
Sbjct: 277 YKLVKDGYQMAQP-------------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
Query: 744 ITAMEP 749
+
Sbjct: 324 QAQEDR 329
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 9e-19
Identities = 49/283 (17%), Positives = 102/283 (36%), Gaps = 68/283 (24%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSK------NLESQ-FRKKIDTLSKV 536
G F G V+K K R D ++ +++ L+K+
Sbjct: 22 GGF-----GQVFK---------------AKHRIDGKTYVIKRVKYNNEKAEREVKALAKL 61
Query: 537 NHKNFVNLIGYCEEDEPFTRM--------------MVFEYSPNGSLFEHLHIQEAEHLDW 582
+H N V+ G + + + E+ G+L + + + E LD
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAK 639
+ L + + ++++H + +R+L+ S+I+L + KI DF + N
Sbjct: 122 VLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 179
Query: 640 T--GS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
G+ + E + + E ++Y+ G IL E++ + + ++ G
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF----ETSKFFTDLRDG- 234
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ DI D K+ ++ + P+ RP+ I
Sbjct: 235 -IISDIFDKKEKTL-----------LQKLLSKKPEDRPNTSEI 265
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 9e-19
Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 70/307 (22%)
Query: 484 GSFSDGTVGTVYKGT---LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSKV-NH 538
G F G V + + +VK + D ++ S +++ + + H
Sbjct: 92 GCF-----GQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--------------HIQEAEHLDWA- 583
KN +NL+G C +D P ++ EY+ G+L E+L + E + +
Sbjct: 147 KNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 584 ---MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTT 636
++A GM Y L HR+L + ++ +TE+ KI+DF N
Sbjct: 205 LVSCTYQLARGMEY-LASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 258
Query: 637 AAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISY-SIENGSLENWA 687
KT + + E L +S+V+SFG +++E+ T G Y I L
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL---- 314
Query: 688 SEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ LK ++P N EL +++++C H P QRP+ + + L
Sbjct: 315 FKLLKEGHRMDKP-------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
Query: 744 ITAMEPD 750
I + +
Sbjct: 362 ILTLTTN 368
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 1e-18
Identities = 65/313 (20%), Positives = 112/313 (35%), Gaps = 64/313 (20%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGV-EIAVTSTSVKS-RADWSKN 521
+ ++ R + +G G G VY+G +S + + +VK+ S+
Sbjct: 65 LKEVPRKNIT-----LIRGLGH---GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ 116
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQE 576
E F + +SK NH+N V IG + P ++ E G L L +
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQ 174
Query: 577 AEHLDW----AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF 629
L + IA G Y LE H HR++ + + LT AKI DF
Sbjct: 175 PSSLAMLDLLHVARDIACGCQY-LEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 630 SF----WNNTTAAKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISYS 677
+ K G A + E +++ +SFG +L+E+ + G + Y
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 288
Query: 678 IENGSLENW-ASEYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
S N E++ + P +N + ++ C P+ RP
Sbjct: 289 ----SKSNQEVLEFVTSGGRMDPP-------------KNCPGPVYRIMTQCWQHQPEDRP 331
Query: 733 SMRGIAAKLKEIT 745
+ I +++ T
Sbjct: 332 NFAIILERIEYCT 344
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 2e-18
Identities = 61/315 (19%), Positives = 115/315 (36%), Gaps = 77/315 (24%)
Query: 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKS-RADWSKN 521
+ K +G G G+V +G +I V ++K + K
Sbjct: 325 LKDKKLFLKRDNLLIADIELGC---GNFGSVRQGVYRMRKKQIDV---AIKVLKQGTEKA 378
Query: 522 LESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQE 576
+ ++ + ++++ V LIG C+ E M+V E + G L + L I
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL--MLVMEMAGGGPLHKFLVGKREEIPV 435
Query: 577 AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------S 630
+ + +++MGM Y LE + HRNL + ++ L + AKISDF
Sbjct: 436 SNVAELL--HQVSMGMKY-LEEKN-----FVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 631 FWNNTTAAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISY--- 676
++ A++ A E + +S S+V+S+G ++E ++ G+ Y
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSR----SDVWSYGVTMWEALSYGQKPYKKM 543
Query: 677 -------SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPK 729
IE G + + E P EL ++ +C +
Sbjct: 544 KGPEVMAFIEQG-------KRM--ECP-------------PECPPELYALMSDCWIYKWE 581
Query: 730 QRPSMRGIAAKLKEI 744
RP + +++
Sbjct: 582 DRPDFLTVEQRMRAC 596
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 48/274 (17%)
Query: 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
G F VY+ L GV +A+ + D +K K+ID L ++NH N +
Sbjct: 43 GQF-----SEVYRAACLLDGVPVALKKVQIFDLMD-AKARA-DCIKEIDLLKQLNHPNVI 95
Query: 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--------HIQEAEHLDWAMRLRIAMGMAY 594
ED +V E + G L + I E + ++L A
Sbjct: 96 KYYASFIEDNEL--NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA----- 148
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKT--GS---AAM 645
LEHMH + HR+++ +++++T K+ D F + TTAA + G+ +
Sbjct: 149 -LEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 646 ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP--LKDIVDP 703
E + + + +S+++S G +L+EM + + + +L + + + + P D
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L+ + C++PDP++RP + +
Sbjct: 266 ELRQL-----------VNMCINPDPEKRPDVTYV 288
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 69/309 (22%)
Query: 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKS-RADWSKNLESQFR 527
EL+A ++G+ G G V G L S EI+V ++K+ + +++ F
Sbjct: 41 ELDATNISIDKVVGA---GEFGEVCSGRLKLPSKKEISV---AIKTLKVGYTEKQRRDFL 94
Query: 528 KKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEH-----LDW 582
+ + + +H N + L G + +P M+V EY NGSL L +A+ +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTT 636
IA GM Y L M HR+L + +I + + K+SDF
Sbjct: 153 L--RGIASGMKY-LSDMG-----YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 637 AAKTGS------AAMELLE----TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685
G + E + TSA S+V+S+G +L+E+++ G Y
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSA----SDVWSYGIVLWEVMSYGERPY--------- 251
Query: 686 WASEYLKGEQPLKDIVD------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739
+ + +K + + P + L ++ +C D RP I +
Sbjct: 252 ---WEMSNQDVIKAVDEGYRLPPP------MDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 740 KLKEITAME 748
L ++
Sbjct: 303 ILDKLIRNP 311
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-18
Identities = 61/307 (19%), Positives = 118/307 (38%), Gaps = 76/307 (24%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKV-NHKN 540
G+F G V T + V+ +VK + + ++ ++++ +H+N
Sbjct: 56 GAF-----GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL---------------HIQEAEHLDWAMR 585
VNL+G C P ++FEY G L +L + + E +
Sbjct: 111 IVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 586 LR----------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---- 631
L +A GM + LE HR+L + ++ +T KI DF
Sbjct: 169 LTFEDLLCFAYQVAKGMEF-LEFKS-----CVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 632 WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSL 683
+++ G+A A E L ++S+V+S+G +L+E+ + G Y +
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP----GI 278
Query: 684 ENWAS--EYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
A+ + ++ +QP EE+ +++++C D ++RPS +
Sbjct: 279 PVDANFYKLIQNGFKMDQP-------------FYATEEIYIIMQSCWAFDSRKRPSFPNL 325
Query: 738 AAKLKEI 744
+ L
Sbjct: 326 TSFLGCQ 332
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-18
Identities = 51/288 (17%), Positives = 99/288 (34%), Gaps = 73/288 (25%)
Query: 484 GSFSDGTVGTVYKGT-LSSGV-----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
GS+ G K S G E+ S + + +++ L ++
Sbjct: 17 GSY-----GRCQKIRRKSDGKILVWKELDYGSMTEAEKQ--------MLVSEVNLLRELK 63
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--------HIQEAEHLDWAMRLRIA 589
H N V + T +V EY G L + ++ E L ++
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM--TQLT 121
Query: 590 MGMAYCLEH-MHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKT--GS 642
+ + C H + HR+L+ ++++L K+ DF ++T+ AKT G+
Sbjct: 122 LALKEC--HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 643 ---AAMELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWASE 689
+ E + + + +S+++S G +L+E+ ++ I G
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
Y S +EL +I ++ RPS+ I
Sbjct: 240 Y----------------S------DELNEIITRMLNLKDYHRPSVEEI 265
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-17
Identities = 60/301 (19%), Positives = 111/301 (36%), Gaps = 70/301 (23%)
Query: 484 GSFSDGTVGTVYKGTLSSGVEIAVTST-SVKS-RADWSKNLESQFRKKIDTLSKV-NHKN 540
G+F G V + + A T +VK + + + ++ L + +H N
Sbjct: 38 GAF-----GQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 541 FVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWA---------------- 583
VNL+G C + P M++ E+ G+L +L + E + +
Sbjct: 93 VVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 584 --MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTA 637
++A GM + L HR+L + +I L+E KI DF + +
Sbjct: 151 ICYSFQVAKGMEF-LASRK-----CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 638 AKTGSAAM-------ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS- 688
+ G A + E + ++S+V+SFG +L+E+ + G Y ++
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVKIDEEF 260
Query: 689 -EYLKG----EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
LK P + E+ + +C H +P QRP+ + L
Sbjct: 261 CRRLKEGTRMRAP-------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 744 I 744
+
Sbjct: 308 L 308
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 58/276 (21%)
Query: 484 GSFSDGTVGTVYKGT-LSSGV-----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
GSF G G EI ++ S K R + R+++ L+ +
Sbjct: 35 GSF-----GKAILVKSTEDGRQYVIKEINISRMSSKEREE--------SRREVAVLANMK 81
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL------HIQEAEHLDWAMRLRIAMG 591
H N V EE+ +V +Y G LF+ + QE + LDW +++ +A
Sbjct: 82 HPNIVQYRESFEENGSL--YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA-- 137
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKT--GS--- 642
L+H+H I HR+++S +I+LT+D ++ DF + A+ G+
Sbjct: 138 ----LKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIV 701
+ E+ E + +S++++ G +L+E+ T + ++ E GS++N + + G P+
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAF--EAGSMKNLVLKIISGSFPPVSLHY 249
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L+S + +P+ RPS+ I
Sbjct: 250 SYDLRSL-----------VSQLFKRNPRDRPSVNSI 274
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 60/284 (21%), Positives = 105/284 (36%), Gaps = 54/284 (19%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLSKVNH 538
IGS G V++ A+ K + + +R +I L+K+
Sbjct: 34 KQIGS---GGSSKVFQVLNEKKQIYAI-----KYVNLEEADNQTLDSYRNEIAYLNKLQQ 85
Query: 539 KNF--VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+ + L Y D+ MV E N L +++ + +D R M +
Sbjct: 86 HSDKIIRLYDYEITDQYI--YMVMECG-NIDLNSW--LKKKKSIDPWERKSYWKNMLEAV 140
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS-------AAM 645
+HQ I H +L+ ++ L D K+ DF +TT+ S
Sbjct: 141 HTIHQHG--IVHSDLKPANF-LIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 646 ELLE-----------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
E ++ S + +S+V+S G IL+ M G+ + +
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------- 248
Query: 695 QPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L I+DP + F + ++L V+K C+ DPKQR S+ +
Sbjct: 249 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 2e-17
Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 67/308 (21%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLS 534
S+I+G G V++G +G A+ K + + + ++ Q R+ + L
Sbjct: 12 LLSDILGQ---GATANVFRGRHKKTGDLFAI-----KVFNNISFLRPVDVQMRE-FEVLK 62
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-------IQEAEHLDWAMRL- 586
K+NHKN V L EE ++++ E+ P GSL+ L + E+E + +
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE----FLIVL 118
Query: 587 -RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT----EDYAAKISDFSF---WNNTTAA 638
+ GM + E+ I HRN++ +I K++DF +
Sbjct: 119 RDVVGGMNHLRENG------IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 639 KT--GS---AAMELLETSAV--------DLESNVYSFGTILFEMITGR------------ 673
+ G+ ++ E + + +++S G + TG
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 674 --ISYSIENGSLENWASEYLKGEQPLKDIVD--PTLKSFQENVLEELLVVIKNCVHPDPK 729
+ Y I G S K E D P S + L V+ N + D +
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292
Query: 730 QRPSMRGI 737
+
Sbjct: 293 KCWGFDQF 300
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 4e-17
Identities = 58/284 (20%), Positives = 105/284 (36%), Gaps = 54/284 (19%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLSKVNH 538
IGS G V++ A+ K + + +R +I L+K+
Sbjct: 15 KQIGS---GGSSKVFQVLNEKKQIYAI-----KYVNLEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 539 KNF--VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+ + L Y D+ MV E N L +++ + +D R M +
Sbjct: 67 HSDKIIRLYDYEITDQYI--YMVMECG-NIDLNSW--LKKKKSIDPWERKSYWKNMLEAV 121
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS-------AAM 645
+HQ I H +L+ ++ + + K+ DF +TT+ S
Sbjct: 122 HTIHQHG--IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 646 ELLE-----------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
E ++ S + +S+V+S G IL+ M G+ + +
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------- 229
Query: 695 QPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L I+DP + F + ++L V+K C+ DPKQR S+ +
Sbjct: 230 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 6e-17
Identities = 60/284 (21%), Positives = 105/284 (36%), Gaps = 54/284 (19%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLSKVNH 538
IGS G V++ A+ K + + +R +I L+K+
Sbjct: 62 KQIGS---GGSSKVFQVLNEKKQIYAI-----KYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 539 KNF--VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+ + L Y D+ MV E N L +++ + +D R M +
Sbjct: 114 HSDKIIRLYDYEITDQYI--YMVMECG-NIDLNSW--LKKKKSIDPWERKSYWKNMLEAV 168
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS-------AAM 645
+HQ I H +L+ ++ L D K+ DF +TT+ S
Sbjct: 169 HTIHQHG--IVHSDLKPANF-LIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
Query: 646 ELLE-----------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
E ++ S + +S+V+S G IL+ M G+ + +
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------- 276
Query: 695 QPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L I+DP + F + ++L V+K C+ DPKQR S+ +
Sbjct: 277 --LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 2e-16
Identities = 61/318 (19%), Positives = 112/318 (35%), Gaps = 67/318 (21%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK--SRADWSKNLESQFRKKIDTLS 534
S+I+G G V++G +G A+ K + + + ++ Q R+ + L
Sbjct: 12 LLSDILGQ---GATANVFRGRHKKTGDLFAI-----KVFNNISFLRPVDVQMRE-FEVLK 62
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-------IQEAEHLDWAMRL- 586
K+NHKN V L EE ++++ E+ P GSL+ L + E+E + +
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESE----FLIVL 118
Query: 587 -RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT----EDYAAKISDFSF---WNNTTAA 638
+ GM + E+ I HRN++ +I K++DF +
Sbjct: 119 RDVVGGMNHLRENG------IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 639 KT--GS---AAMELLETSAV--------DLESNVYSFGTILFEMITGR------------ 673
+ G+ ++ E + + +++S G + TG
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 674 --ISYSIENGSLENWASEYLKGEQPLKDIVD--PTLKSFQENVLEELLVVIKNCVHPDPK 729
+ Y I G S K E D P S + L V+ N + D +
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292
Query: 730 QRPSMRGIAAKLKEITAM 747
+ A+ +I
Sbjct: 293 KCWGFDQFFAETSDILHR 310
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 59/286 (20%), Positives = 93/286 (32%), Gaps = 57/286 (19%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ F + +G G+ G V+K G AV S K+ + +
Sbjct: 57 QSFQRLSRLGH---GSYGEVFKVRSKEDGRLYAVKR--SMSPFRGPKDRARKLAEVGSHE 111
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL-----HIQEAEHLDWAMRLRI 588
H V L EE + E SL +H + EA+ +
Sbjct: 112 KVGQHPCCVRLEQAWEEGGIL--YLQTELC-GPSLQQHCEAWGASLPEAQVWGYL--RDT 166
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT--GSA 643
+ L H+H + H +++ ++I+L K+ DF A + G
Sbjct: 167 LLA----LAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP 220
Query: 644 ---AMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
A ELL+ +A D V+S G + E+ E W Q L
Sbjct: 221 RYMAPELLQGSYGTAAD----VFSLGLTILEVACNMELPH----GGEGW--------QQL 264
Query: 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743
+ P F + EL V+ + PDPK R + A L
Sbjct: 265 RQGYLP--PEFTAGLSSELRSVLVMMLEPDPKLRAT----AEALLA 304
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 80.2 bits (198), Expect = 3e-16
Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 65/261 (24%)
Query: 519 SKNLESQFRKKIDTLSKVNHKNFVNLIGYCE-EDEPFTRMMVFEYSPNGSLFEHLHIQEA 577
K+ F+ ++ ++ + ++ + G DE + +++EY N S+ +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVY---IIYEYMENDSILKFDEYFFV 139
Query: 578 EHLDWAMRLR----------IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627
++ + + +Y + I HR+++ S+I + ++ K+S
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-----ICHRDVKPSNILMDKNGRVKLS 194
Query: 628 DF--SFWNNTTAAKT--GS---AAMELLET------SAVDLESNVYSFGTILFEMITG-- 672
DF S + K G+ E + VD ++S G L+ M
Sbjct: 195 DFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD----IWSLGICLYVMFYNVV 250
Query: 673 -------------RIS---YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL 716
I K + + F L+
Sbjct: 251 PFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDF----LKLF 306
Query: 717 LVVIKNCVHPDPKQRPSMRGI 737
L +P +R +
Sbjct: 307 LRK-------NPAERITSEDA 320
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 77.0 bits (189), Expect = 3e-15
Identities = 22/322 (6%), Positives = 75/322 (23%), Gaps = 52/322 (16%)
Query: 452 LSGQLQKAFVTGVPKLKRSELEAACEDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVT 508
+ + S L + G V+ + + A+
Sbjct: 37 VEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRV---GDRSVVFLVRDVERLEDFALK 93
Query: 509 STSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-------------- 554
++ + S+ + + +++ ++ P
Sbjct: 94 VFTMGAENSRSE--LERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQL 151
Query: 555 ----------TRMMVFEYSPNGSLFE-----HLHIQEAEHLDWAMRLRIAMGMAYCLEHM 599
+++ + L + + ++
Sbjct: 152 SPGQDDYAVANYLLLMPA-ASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL 210
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTAAKTGSAAM---ELL--ETS 651
+ H + ++++ D + D S A + E L T+
Sbjct: 211 QSK--GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTA 268
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
N + G ++ + + + + + + + S
Sbjct: 269 TFTHALNAWQLGLSIYRVWCLFLPFGLVT---PGIKGSWKRPSLRVPGTDSLAFGS-CTP 324
Query: 712 VLEELLVVIKNCVHPDPKQRPS 733
+ + + +I ++ D ++R
Sbjct: 325 LPDFVKTLIGRFLNFDRRRRLL 346
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 4e-15
Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 40/254 (15%)
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM--MVFEYSPNGSLFEHLHIQEAEHLDWA 583
FR++ + +NH V + E + P + +V EY +L + + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI--VHTEGPMTPK 116
Query: 584 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT 640
+ + L HQ I HR+++ ++I ++ A K+ DF ++ + T
Sbjct: 117 RAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 641 GSAAM---------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691
+AA+ E +VD S+VYS G +L+E++TG ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT-------------- 220
Query: 692 KGEQP----LKDIVD--PTLKSFQENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEI 744
G+ P + + + + E + +L V+ + +P+ R + + A L +
Sbjct: 221 -GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
Query: 745 TAMEPDGATPKLSP 758
EP A L+
Sbjct: 280 HNGEPPEAPKVLTD 293
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 5e-15
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 40/225 (17%)
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDE-PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM 584
F +++ S+++H+N V++I EED+ + +V EY +L E+ I+ L
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYY---LVMEYIEGPTLSEY--IESHGPLSVDT 112
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKTG 641
+ + ++H H + I HR+++ +I + + KI DF + T+ +T
Sbjct: 113 AINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 642 SA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
+ E + A D +++YS G +L+EM+ G ++ GE
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN---------------GE 215
Query: 695 QP-------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
++D V ++++ + L VI D R
Sbjct: 216 TAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRY 260
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 6e-15
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEH 579
+E Q R++++ S + H N + L GY + TR+ ++ EY+P G+++ L Q+
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL--QKLSK 105
Query: 580 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 639
D +A L + H + HR+++ ++ L KI+DF + + +++
Sbjct: 106 FDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163
Query: 640 T----GS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692
G+ E++E D + +++S G + +E + G+ + E + + +
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISR 221
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
E D V + I + +P QRP +R +
Sbjct: 222 VEFTFPDFVTEGARDL-----------ISRLLKHNPSQRPMLREV 255
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 61/307 (19%), Positives = 109/307 (35%), Gaps = 77/307 (25%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
DF I +G G G V K A+ K + ++ S ++ L
Sbjct: 6 SDFEEIAVLGQ---GAFGQVVKARNALDSRYYAI-----K-KIRHTEEKLSTILSEVMLL 56
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRM-----------MVFEYSPNGSLFEHL-----HIQEA 577
+ +NH+ V E F + + EY NG+L++ + + Q
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWN 633
E+ R +I ++Y H I HR+L+ +I++ E KI DF +
Sbjct: 117 EYWRL-FR-QILEALSYI--HSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 634 NTTAAKTGSAAM-------------------ELLETSAV-DLESNVYSFGTILFEMITGR 673
+ K S + E+L+ + + + ++YS G I FEMI
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP- 227
Query: 674 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLK---SFQENVLEELLVVIKNCVHPDPKQ 730
G LK + +++ F +N ++ +I+ + DP +
Sbjct: 228 ----FSTGMERV---------NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNK 274
Query: 731 RPSMRGI 737
RP R +
Sbjct: 275 RPGARTL 281
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-14
Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 45/266 (16%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G ++ + + A KS + + +I + H++ V G+
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVP-KSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 548 CEEDEPFTRM-MVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
E++ + +V E SL E + E E A +I +G Y H +
Sbjct: 84 FEDN---DFVFVVLELCRRRSLLELHKRRKALTEPE----ARYYLRQIVLGCQYL--HRN 134
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----KT--GS---AAMELLETS 651
+ + HR+L+ +++L ED KI DF K G+ A E+L
Sbjct: 135 R----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL--- 245
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGI 737
I+ + DP RP++ +
Sbjct: 246 --------IQKMLQTDPTARPTINEL 263
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 76.3 bits (187), Expect = 2e-14
Identities = 55/297 (18%), Positives = 99/297 (33%), Gaps = 55/297 (18%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
+ +G+ G G V + +G ++A+ + KN E + I + K+
Sbjct: 17 EMKERLGT---GGFGYVLRWIHQDTGEQVAIKQ--CRQELS-PKNRERWCLE-IQIMKKL 69
Query: 537 NHKNFVNLIGYCEEDEPFTRM----MVFEYSPNGSLFEHLH-------IQEAEHLDWAMR 585
NH N V+ + + + EY G L ++L+ ++E
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP----IRT 125
Query: 586 L--RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSF---WNNTTA 637
L I+ + Y E+ I HR+L+ +I L + KI D + +
Sbjct: 126 LLSDISSALRYLHENR------IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 638 AKT--GS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692
G+ A ELLE + + +SFGT+ FE ITG + W + +
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVRE 238
Query: 693 GEQ----PLKDIVDPTLKSFQENVLEELLVVIKNCVHP--------DPKQRPSMRGI 737
D+ S L ++ + +QR +
Sbjct: 239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 3e-14
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 10/134 (7%)
Query: 155 NVNPCSW---FGVEC-SDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG--- 207
N W GV S+G+V L+L G + +GQL+EL+ + L ++
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 208 -TIPKEIGELKELEILDLGFNNFSGPFPSDFG--NSFSLTTLLLDNNQYLGGISPELHVL 264
PK I E ++ F + L ++++ I +
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182
Query: 265 KVISEIQVDESWLT 278
++I + +T
Sbjct: 183 LKDTQIGQLSNNIT 196
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-13
Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFF-GTIPKEIGELKELEILDLGFNNFSG 231
++ L + +++ I + N+ + + ++K+L +L+ +N G
Sbjct: 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEG 344
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
P+ FG+ L +L L NQ + I
Sbjct: 345 KLPA-FGSEIKLASLNLAYNQ-ITEIPANF 372
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 5e-13
Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF---- 229
N + L +L + + N +P + L E++++++ N
Sbjct: 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGE 289
Query: 230 ----SGPFPSDFGNSFSLTTLLLDNNQ 252
+D + + + N
Sbjct: 290 QLKDDWQALADAPVGEKIQIIYIGYNN 316
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 9e-12
Identities = 26/137 (18%), Positives = 39/137 (28%), Gaps = 12/137 (8%)
Query: 138 DPFGALSK-WSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCL-GGMLAPELGQLSEL 195
+ AL + W +G S G G N ++L + G L +
Sbjct: 30 KDYLALKEIWDALNG-----KNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRV 83
Query: 196 KSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNN 251
+ L G +P IG+L ELE+L LG + P + S
Sbjct: 84 TGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRM 143
Query: 252 QYLGGISPELHVLKVIS 268
Y
Sbjct: 144 HYQKTFVDYDPREDFSD 160
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 188 ELGQLSELKSIILRNNSF-------FGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
+ +S + +I N F + + + ++L N S F
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 241 FSLTTLLLDNNQYLGGISPEL 261
L+++ L N L I
Sbjct: 457 SPLSSINLMGNM-LTEIPKNS 476
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
L ++ +L + N G +P G +L L+L +N + + G + + L
Sbjct: 324 TSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENL 382
Query: 247 LLDNNQYLGGISPEL 261
+N+ L I
Sbjct: 383 SFAHNK-LKYIPNIF 396
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-------PFPSDFGN 239
P + + SI L NN + L ++L N + +F N
Sbjct: 427 PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKN 486
Query: 240 SFSLTTLLLDNNQYLGGISPELHVLK 265
++ LT++ L N+ L +S +
Sbjct: 487 TYLLTSIDLRFNK-LTKLSDDFRATT 511
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-10
Identities = 10/85 (11%), Positives = 25/85 (29%)
Query: 175 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP 234
LR +G ++ + T + LK+L +++ P
Sbjct: 207 KLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266
Query: 235 SDFGNSFSLTTLLLDNNQYLGGISP 259
+ + + + N+ + G
Sbjct: 267 TFLKALPEMQLINVACNRGISGEQL 291
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 20/107 (18%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP- 232
+ + + I +N+ + K + L +L +G + F
Sbjct: 164 DCINSDPQQKSIKKSSRITLKDTQIGQLSNNI-TFVSKAVMRLTKLRQFYMGNSPFVAEN 222
Query: 233 ------------------FPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
+ N LT + + N L + L
Sbjct: 223 ICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFL 269
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 10/95 (10%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRN------NSFFGTIPKEIGELKELEILDLGF 226
++L + S LK +RN N P+ I L L +G
Sbjct: 517 GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575
Query: 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
N+ N ++ L + +N + +
Sbjct: 576 NDIRKVNEKITPN---ISVLDIKDNPNISIDLSYV 607
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 5e-09
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEI--GELKELEILDLGFNNFSGPFPSDFG 238
L SI LR N + + L L +DL +N+FS FP+
Sbjct: 476 SLKDENENFKNTYLLTSIDLRFNKL-TKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPL 533
Query: 239 NSFSLTTLLLDNNQYLGG 256
NS +L + N + G
Sbjct: 534 NSSTLKGFGIRNQRDAQG 551
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 6e-09
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSG-PFPSDFGNSFSLT 244
P G +L S+ L N IP G +++E L N P D + ++
Sbjct: 347 PAFGSEIKLASLNLAYNQI-TEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMS 405
Query: 245 TLLLDNNQYLGGISPE 260
+ N+ +G + +
Sbjct: 406 AIDFSYNE-IGSVDGK 420
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-08
Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 9/97 (9%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSF-------FGTIPKEIGELKELEILDLG 225
+NL + + S L SI L N + L +DL
Sbjct: 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496
Query: 226 FNNFSG-PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
FN + L + L N +
Sbjct: 497 FNKLTKLSDDFRATTLPYLVGIDLSYNS-FSKFPTQP 532
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 7e-08
Identities = 10/101 (9%), Positives = 24/101 (23%), Gaps = 3/101 (2%)
Query: 173 ILNLRDLCLGGMLAPELG--QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+ S+L + ++ +I K + + NN +
Sbjct: 137 QKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNIT 196
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQ 271
L + N+ ++ E + Q
Sbjct: 197 F-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 8/70 (11%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 183 GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFS 242
+ L + + +N + ++I + +LD+ N S
Sbjct: 556 REWPEGITLCPSLTQLQIGSNDI-RKVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIE 612
Query: 243 LTTLLLDNNQ 252
+L ++
Sbjct: 613 AGMYMLFYDK 622
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 3e-14
Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 45/266 (16%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G ++ + + A KS + + +I + H++ V G+
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVP-KSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 548 CEEDEPFTRM-MVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
E++ + +V E SL E + E E A +I +G Y H +
Sbjct: 110 FEDN---DFVFVVLELCRRRSLLELHKRRKALTEPE----ARYYLRQIVLGCQYL--HRN 160
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA----KT--GS---AAMELLETS 651
+ + HR+L+ +++L ED KI DF K G+ A E+L
Sbjct: 161 R----VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
E +V+S G I++ ++ G+ + E L+ K E + ++P S
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPKHINPVAASL--- 271
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGI 737
I+ + DP RP++ +
Sbjct: 272 --------IQKMLQTDPTARPTINEL 289
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 5e-14
Identities = 32/161 (19%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEH 579
+E Q R++I+ S + H N + + Y + R+ ++ E++P G L++ L Q+
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDR---KRIYLMLEFAPRGELYKEL--QKHGR 110
Query: 580 LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK 639
D +A L + H+ + HR+++ ++ + KI+DF + + + +
Sbjct: 111 FDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168
Query: 640 T----GS---AAMELLETSAVDLESNVYSFGTILFEMITGR 673
G+ E++E D + +++ G + +E + G
Sbjct: 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 6e-14
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 29/201 (14%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVNHKNFVNLIG 546
G+ VY+ + +G+E+A+ + + K + + + ++ ++ H + + L
Sbjct: 22 GSFAGVYRAESIHTGLEVAI---KMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 547 YCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMR---LRIAMGMAYCLEHMHQL 602
Y E+ + +V E NG + +L + + R +I GM Y H H
Sbjct: 79 YFEDS---NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL--HSHG- 132
Query: 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA-----KT--GS---AAMELLETSA 652
I HR+L S++ LT + KI+DF T G+ + E+ SA
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFG-LATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 653 VDLESNVYSFGTILFEMITGR 673
LES+V+S G + + ++ GR
Sbjct: 189 HGLESDVWSLGCMFYTLLIGR 209
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 7e-14
Identities = 57/304 (18%), Positives = 98/304 (32%), Gaps = 69/304 (22%)
Query: 484 GSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNF 541
G F VY+ + SG E A+ +++ + K+ H N
Sbjct: 39 GGF-----AFVYEAQDVGSGREYALKRLLSNEEEK-----NRAIIQEVCFMKKLSGHPNI 88
Query: 542 VNLIGYC-----EEDEPFTRMMVFEYSPNGSLFEHL-HIQEAEHLDWAMRLRIAMGMAYC 595
V E D ++ G L E L ++ L L+I
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKTGSAAMELLETSA 652
++HMH+ PPI HR+L+ ++ L+ K+ DF + ++ + L+E
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 653 -------------VDLESNVY--------SFGTILFEMITGR------ISYSIENGSLEN 685
+DL SN + G IL+ + + I NG
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI 268
Query: 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745
P D S I+ + +P++R S+ + +L+EI
Sbjct: 269 ----------PPHDTQYTVFHSL-----------IRAMLQVNPEERLSIAEVVHQLQEIA 307
Query: 746 AMEP 749
A
Sbjct: 308 AARN 311
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 9e-14
Identities = 61/282 (21%), Positives = 104/282 (36%), Gaps = 58/282 (20%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS--RADWSKNLESQFRKKIDTLS 534
+GS G G V + VE A+ K + S + S+ +++ L
Sbjct: 40 QRVKKLGS---GAYGEVLLCRDKVTHVERAI-----KIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594
++H N + L + E+ + +V E G LF+ I + I +
Sbjct: 92 LLDHPNIMKLYDFFEDKRNYY--LVMECYKGGELFDE--IIHRMKFNEVDAAVIIKQVLS 147
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT--GSA--- 643
+ ++H+ I HR+L+ ++ L +D KI DF + + N K G+A
Sbjct: 148 GVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWASEYLKG 693
A E+L D + +V+S G ILF ++ G I +E G + S K
Sbjct: 206 APEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY-TFDSPEWKN 263
Query: 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
V K IK + D ++R S +
Sbjct: 264 -------VSEGAKDL-----------IKQMLQFDSQRRISAQ 287
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 59/280 (21%), Positives = 105/280 (37%), Gaps = 53/280 (18%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
++G G+ G V +G E AV + R K + +++ L ++
Sbjct: 29 KGQRVLGK---GSFGEVILCKDKITGQECAVKV--ISKRQVKQKTDKESLLREVQLLKQL 83
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+H N + L + E+ F +V E G LF+ I + RI + +
Sbjct: 84 DHPNIMKLYEFFEDKGYFY--LVGEVYTGGELFDE--IISRKRFSEVDAARIIRQVLSGI 139
Query: 597 EHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT--GSA---AM 645
+MH+ I HR+L+ ++ L +D +I DF + + + K G+A A
Sbjct: 140 TYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 197
Query: 646 ELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWASEYLKGEQ 695
E+L + D + +V+S G IL+ +++G I +E G + K
Sbjct: 198 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY-TFELPQWKK-- 253
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
V + K I+ + P R S R
Sbjct: 254 -----VSESAKDL-----------IRKMLTYVPSMRISAR 277
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 71.5 bits (175), Expect = 2e-13
Identities = 46/314 (14%), Positives = 99/314 (31%), Gaps = 60/314 (19%)
Query: 464 VPKLK-RSELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTST----SVKSRA 516
+P +K ++E + + +++G G VY+ T + K
Sbjct: 51 LPAIKPKTEFQLGSKLVYVHHLLGE---GAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN 107
Query: 517 DWSKNLESQFRKKIDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHL--- 572
W + +Q ++ L F+ + ++ +V E G+L +
Sbjct: 108 PWEFYIGTQLMER---LKPSMQHMFMKFYSAHLFQNGSV---LVGELYSYGTLLNAINLY 161
Query: 573 HIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA-------- 624
+ + + + AM M Y +E +H I H +++ + L +
Sbjct: 162 KNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDDEDDLS 219
Query: 625 ---KISDFSF--------WNNTTAAKTGS---AAMELLETSAVDLESNVYSFGTILFEMI 670
+ D AK + +E+L + + + + ++ M+
Sbjct: 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279
Query: 671 TGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQ 730
G G K E + + ++ E V+ N PD
Sbjct: 280 FGTYMKVKNEGGEC-------KPEGLFR-------RLPHLDMWNEFFHVMLN--IPDCHH 323
Query: 731 RPSMRGIAAKLKEI 744
PS+ + KLK++
Sbjct: 324 LPSLDLLRQKLKKV 337
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 3e-13
Identities = 27/302 (8%), Positives = 76/302 (25%), Gaps = 70/302 (23%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK-------------------- 520
++G + T +G V R +
Sbjct: 80 VLGQ---EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ 136
Query: 521 ---NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE--YSPNGSLFEHL--H 573
+ +F D + K + + + +R ++ S + E L H
Sbjct: 137 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSH 196
Query: 574 IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-- 631
+ L RL++ + + L +H + H L+ I L + ++ F
Sbjct: 197 SSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDIVLDQRGGVFLTGFEHLV 254
Query: 632 WNNTTAAKTGSAA--------------MELLETSAVDLESNVYSFGTILFEMITGRISYS 677
+ + S + + + ++ G +++ + + +
Sbjct: 255 RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPIT 314
Query: 678 IENGSLENWASEYLKGEQPLKDIVD--PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+ E + + +++ ++ + + R
Sbjct: 315 KDA--------ALGGSEWIFRSCKNIPQPVRAL-----------LEGFLRYPKEDRLLPL 355
Query: 736 GI 737
Sbjct: 356 QA 357
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 6e-13
Identities = 54/288 (18%), Positives = 96/288 (33%), Gaps = 59/288 (20%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAV--------TSTSVKSRADWSKNLESQFRK 528
+GS G G V + E A+ + +
Sbjct: 39 FKVRKLGS---GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
+I L ++H N + L E+ + F +V E+ G LFE I D I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFY--LVTEFYEGGELFEQ--IINRHKFDECDAANI 151
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT-- 640
+ + ++H+ I HR+++ +I L KI DF SF++ +
Sbjct: 152 MKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL 209
Query: 641 GSA---AMELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWA 687
G+A A E+L+ + + +V+S G I++ ++ G I +E G +
Sbjct: 210 GTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY-YFD 267
Query: 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
K + K IK + D +R +
Sbjct: 268 FNDWKN-------ISDEAKEL-----------IKLMLTYDYNKRCTAE 297
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 6e-13
Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 67/286 (23%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK--NLESQFRKKIDTLSKVN 537
+G G+ G V++ +G + AV K LE +++ + ++
Sbjct: 64 PRVGR---GSFGEVHRMKDKQTGFQCAV------------KKVRLEVFRVEELVACAGLS 108
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL--HIQEAEHLDWAMRLRIAMGMAYC 595
V L G E M E GSL + + E + G+ Y
Sbjct: 109 SPRIVPLYGAVREGPWVNIFM--ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY- 165
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF-----WNNTTAAKTGSAAM---- 645
L H + I H ++++ ++ L+ D A + DF + + +
Sbjct: 166 L-HTRR----ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
Query: 646 -----ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ----- 695
E++ D + +++S ++ M+ G ++ +
Sbjct: 221 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT----QYFRGPLCLKIASEPPPIR 276
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ P I+ + +P R S A +L
Sbjct: 277 EIPPSCAPLTAQA-----------IQEGLRKEPVHRAS----AMEL 307
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 48/295 (16%), Positives = 105/295 (35%), Gaps = 70/295 (23%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVK--SRADWSKNLESQFRKKID 531
+F + IGS G G+V+K G A+ K + E +++
Sbjct: 11 TEFHELEKIGS---GEFGSVFKCVKRLDGCIYAI-----KRSKKPLAGSVDEQNALREVY 62
Query: 532 TLSKV-NHKNFVNLIGYCEEDEPFTRMMVF-EYSPNGSLFEHL--HIQEAEHLD----WA 583
+ + H + V ED+ M++ EY GSL + + + + +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 119
Query: 584 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-------------------YAA 624
+ L++ G L ++H ++ + H +++ S+I+++
Sbjct: 120 LLLQVGRG----LRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173
Query: 625 KISDFSFWNNTTAAKT--GSA---AMELL-ETSAVDLESNVYSFGTILFEMITGRISYSI 678
KI D ++ + G + A E+L E ++++++ +
Sbjct: 174 KIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE----- 228
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+ +I L + + +E ++K +HPDP++RPS
Sbjct: 229 ----------PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPS 273
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-12
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G V + +G E+A+ K++ + +L+ FR+ + + +NH N V L
Sbjct: 26 GNFAKVKLARHILTGREVAIKIID-KTQLN-PTSLQKLFRE-VRIMKILNHPNIVKLFEV 82
Query: 548 CE-EDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
E E + ++ EY+ G +F++L ++E E A +I + YC H
Sbjct: 83 IETEKTLY---LIMEYASGGEVFDYLVAHGRMKEKE----ARSKFRQIVSAVQYC--HQK 133
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT-----GS---AAMELLETSA 652
+ I HR+L++ ++ L D KI+DF F N T G+ AA EL +
Sbjct: 134 R----IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 653 VD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
D E +V+S G IL+ +++G + + +N L+ L+G+ + + EN
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQN--LKELRERVLRGKYRIPFYMSTDC----EN 243
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGI 737
+L+ LV+ +P +R ++ I
Sbjct: 244 LLKRFLVL-------NPIKRGTLEQI 262
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 56/295 (18%), Positives = 101/295 (34%), Gaps = 78/295 (26%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTS---TSVKSRADWSKNLESQFRKKIDTL 533
S +GS G G V + ++A+ + + +I+ L
Sbjct: 138 IMSKTLGS---GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF----EHLHIQEAEHLDWAMRL--R 587
K+NH + + + + ++ + +V E G LF + ++EA +
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQ 247
Query: 588 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT- 640
+ + + Y E+ I HR+L+ ++ L+ ED KI+DF T+ +T
Sbjct: 248 MLLAVQYLHENG------IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 641 -GS---AAMELLE-------TSAVDLESNVYSFGTILFEMITG-----------RISYSI 678
G+ A E+L AVD +S G ILF ++G + I
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVD----CWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+G + E V +K + DPK R +
Sbjct: 358 TSGKYN-FIPEV-------WAEVSEKALDL-----------VKKLLVVDPKARFT 393
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 6e-12
Identities = 60/282 (21%), Positives = 105/282 (37%), Gaps = 58/282 (20%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS--RADWSKNLESQFRKKIDTLS 534
+ ++G G+ G V K + E AV K +A S ++++ L
Sbjct: 25 NIVCMLGK---GSFGEVLKCKDRITQQEYAV-----KVINKASAKNKDTSTILREVELLK 76
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594
K++H N + L E+ F +V E G LF+ I + + RI +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFY--IVGELYTGGELFDE--IIKRKRFSEHDAARIIKQVFS 132
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT--GSA--- 643
+ +MH+ I HR+L+ +I L +D KI DF + + T K G+A
Sbjct: 133 GITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITGR----------ISYSIENGSLENWASEYLKG 693
A E+L + D + +V+S G IL+ +++G I +E G + +
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY-AFDLPQWRT 248
Query: 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+ K I+ + P R +
Sbjct: 249 -------ISDDAKDL-----------IRKMLTFHPSLRITAT 272
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-11
Identities = 47/253 (18%), Positives = 91/253 (35%), Gaps = 52/253 (20%)
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF---EYSPNGSLFEHLHIQEAEHLDW 582
+ L++V H + V + + E + + + EY SL + L
Sbjct: 126 AMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK----GQKLPV 181
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT-- 640
A + + + L ++H + + + +L+ +I LTE+ K+ D A
Sbjct: 182 AEAIAYLLEILPALSYLHSI--GLVYNDLKPENIMLTEE-QLKLIDLG------AVSRIN 232
Query: 641 ------GSAA-M--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691
G+ E++ T +++Y+ G L + + + Y+
Sbjct: 233 SFGYLYGTPGFQAPEIVRTGPTV-ATDIYTVGRTLAALTLDLPTRN----------GRYV 281
Query: 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS----MRG-IAAKLKEITA 746
G DP LK++ LL + PDP+QR + M + L+E+ A
Sbjct: 282 DGLPED----DPVLKTYDS--YGRLLR---RAIDPDPRQRFTTAEEMSAQLTGVLREVVA 332
Query: 747 MEPDGATPKLSPL 759
+ P LS +
Sbjct: 333 QDTGVPRPGLSTI 345
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 65.8 bits (160), Expect = 2e-11
Identities = 29/299 (9%), Positives = 78/299 (26%), Gaps = 65/299 (21%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK-------------------- 520
++G + T +G V R +
Sbjct: 85 VLGQ---EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ 141
Query: 521 ---NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE--YSPNGSLFEHL--H 573
+ +F D + K + + + +R ++ S + E L H
Sbjct: 142 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSH 201
Query: 574 IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-- 631
+ L RL++ + + L +H + H L+ I L + ++ F
Sbjct: 202 SSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPVDIVLDQRGGVFLTGFEHLV 259
Query: 632 -WNNTTAAKTGSA-------AMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSI 678
+ + G A +L + + + ++ G ++ + + +
Sbjct: 260 RDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTD 319
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ E + + + + +++ + + R
Sbjct: 320 DA--------ALGGSEWIFRSCKNIP---------QPVRALLEGFLRYPKEDRLLPLQA 361
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-11
Identities = 54/306 (17%), Positives = 105/306 (34%), Gaps = 76/306 (24%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV- 536
I+G G+ GTV G +AV K + +I L++
Sbjct: 18 VSEKILGY---GSSGTVVFQGSFQGRPVAV-----KR---MLIDFCDIALMEIKLLTESD 66
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC- 595
+H N + E + F + E N +L + ++ D ++L+
Sbjct: 67 DHPNVIRYYCS-ETTDRF-LYIALELC-NLNLQDL--VESKNVSDENLKLQKEYNPISLL 121
Query: 596 ------LEHMHQLTPPIAHRNL-------------QSSSIYLTEDYAAKISDF------- 629
+ H+H L I HR+L + E+ ISDF
Sbjct: 122 RQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 630 ---SFWNNTTAAKTGSA---AMELLE-----------TSAVDLESNVYSFGTILFEMIT- 671
S + +G++ A ELLE T ++D ++S G + + +++
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID----IFSMGCVFYYILSK 235
Query: 672 GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR 731
G+ + + N ++G L ++ +++ E +I + DP +R
Sbjct: 236 GKHPFGDKYSRESN----IIRGIFSLDEMKCL----HDRSLIAEATDLISQMIDHDPLKR 287
Query: 732 PSMRGI 737
P+ +
Sbjct: 288 PTAMKV 293
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 52/278 (18%), Positives = 91/278 (32%), Gaps = 61/278 (21%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G+ G V + + AV K + N E+ +K+I L ++ HKN + L+
Sbjct: 16 GSYGKVKEVLDSETLCRRAVKILK-KKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDV 74
Query: 548 CEEDEPFTRMMVFEYSPNGS--LFEHL---HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
+E MV EY G + + + + A ++ G+ Y H
Sbjct: 75 LYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ----AHGYFCQLIDGLEYL--HSQ 128
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETS--------- 651
I H++++ ++ LT KIS + TS
Sbjct: 129 G----IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD----DTCRTSQGSPAFQPP 180
Query: 652 ------------AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
VD ++S G L+ + TG + +N + KG +
Sbjct: 181 EIANGLDTFSGFKVD----IWSAGVTLYNITTGLYPFEGDN--IYKLFENIGKGSYAIPG 234
Query: 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
P L +K + +P +R S+R I
Sbjct: 235 DCGPPLSDL-----------LKGMLEYEPAKRFSIRQI 261
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-11
Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L+L L + + EL+ + L L L L L N
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
F SL L+ L +
Sbjct: 90 SLALGAFSGLSSLQKLVAVETN-LASLENF 118
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 4e-11
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Query: 173 ILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
+L + P+ +L L + L P L L++L++ NNF
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
+ SL L N + +
Sbjct: 509 LDTFPYKCLNSLQVLDYSLNH-IMTSKKQ 536
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 4e-11
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF-SG 231
L L + + LS L+ ++ + IG LK L+ L++ N S
Sbjct: 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 139
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
P F N +L L L +N+ + I
Sbjct: 140 KLPEYFSNLTNLEHLDLSSNK-IQSIYCT 167
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 8e-11
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSG 231
L++ LS L+ + + NSF +I EL+ L LDL
Sbjct: 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
P+ F + SL L + +N +
Sbjct: 485 LSPTAFNSLSSLQVLNMSHNN-FFSLDTF 512
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-10
Identities = 18/88 (20%), Positives = 30/88 (34%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+L+L + + LS L ++IL N L L+ L N +
Sbjct: 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 115
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPE 260
G+ +L L + +N PE
Sbjct: 116 ENFPIGHLKTLKELNVAHNLIQSFKLPE 143
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-10
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L+L L + LS L+ + + +N+FF L L++LD N+
Sbjct: 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Query: 233 FPSDFGNSF-SLTTLLLDNNQYLGGIS 258
+ + SL L L N +
Sbjct: 534 KKQELQHFPSSLAFLNLTQNDFACTCE 560
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 3e-10
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGPFPSDFGNSFSLTT 245
L +L+ + ++++ + L+ L LD+ + F F SL
Sbjct: 390 SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449
Query: 246 LLLDNNQYLGGISPEL 261
L + N + P++
Sbjct: 450 LKMAGNSFQENFLPDI 465
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-09
Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSF-FGTIPKEIGELKELEILDLGFNNFSG 231
L + L + +G L LK + + +N +P+ L LE LDL N
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 232 PFPSDFGNSFSLT----TLLLDNNQYLGGISPEL 261
+ +D + +L L N + I P
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNP-MNFIQPGA 196
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 8e-09
Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNN--SFFGTIPKEIGELKELEILDLGFNNFSG 231
L G A L L+ + L N SF G + L+ LDL FN
Sbjct: 328 KRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT 387
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISP 259
S+F L L ++ L +S
Sbjct: 388 -MSSNFLGLEQLEHLDFQHSN-LKQMSE 413
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-08
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 193 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
K++ L N EL++LDL + + L+TL+L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 253 YLGGISPEL 261
+ ++
Sbjct: 88 -IQSLALGA 95
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-08
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 11/97 (11%)
Query: 175 NLRDLCL------GGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI----LDL 224
L++L + L L+ L+ + L +N ++ L ++ + LDL
Sbjct: 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184
Query: 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
N + P F L L L NN +
Sbjct: 185 SLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTC 220
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-05
Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN--NFSG 231
L L + G +L L L S G +L LE LDL N +F G
Sbjct: 309 LELVNCKFGQFPTLKLKSLKRL-----TFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG 363
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279
+ SL L L N + +S L+ + + S L
Sbjct: 364 CCSQSDFGTTSLKYLDLSFNG-VITMSSNFLGLEQLEHLDFQHSNLKQ 410
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 12/96 (12%), Positives = 22/96 (22%), Gaps = 12/96 (12%)
Query: 173 ILNLRDLCLGG---MLAPELGQLSELKSIILRNNS------FFGTIPKEIGELKELEILD 223
+ L + + L L ++ + + I L +
Sbjct: 229 VHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288
Query: 224 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
L F +F L L N + G
Sbjct: 289 LVSVTIERVKD--FSYNFGWQHLELVNCK-FGQFPT 321
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 58/283 (20%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
++G GT G VY G LS+ V IA+ K + ++I + HKN
Sbjct: 29 VLGK---GTYGIVYAGRDLSNQVRIAI-----KEIPERDSRYSQPLHEEIALHKHLKHKN 80
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEAEHLDWAMRLRIAMGMAYC 595
V +G E+ M E P GSL L +++ E +I G+ Y
Sbjct: 81 IVQYLGSFSENGFIKIFM--EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY- 137
Query: 596 LEHMHQLTPPIAHRNLQSSSIYL-TEDYAAKISDF------SFWNNTTAAKTGSA---AM 645
L H +Q I HR+++ ++ + T KISDF + N T TG+ A
Sbjct: 138 L-HDNQ----IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 192
Query: 646 ELLETSAV--DLESNVYSFG-TILFEMITGRISYSIENGSLENWASEYLKGEQ----PLK 698
E+++ ++++S G TI+ EM TG+ + E A+ + G +
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTII-EMATGKPPFY---ELGEPQAAMFKVGMFKVHPEIP 248
Query: 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ + K+F I C PDP +R A L
Sbjct: 249 ESMSAEAKAF-----------ILKCFEPDPDKRAC----ANDL 276
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 4e-11
Identities = 57/286 (19%), Positives = 104/286 (36%), Gaps = 61/286 (21%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
+++G G GT+ + ++AV K S +++ L + +
Sbjct: 27 CPKDVLGH---GAEGTIVYRGMFDNRDVAV-----KR---ILPECFSFADREVQLLRESD 75
Query: 538 -HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR--LR-IAMGMA 593
H N + E+D F + + E +L E++ ++ HL L+ G+A
Sbjct: 76 EHPNVIRYFC-TEKDRQF-QYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLA 132
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDF-----------SFWNNTTA 637
+ H L I HR+L+ +I ++ A A ISDF SF +
Sbjct: 133 HL----HSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 638 AKT-GSAAMELLE-------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASE 689
T G A E+L T VD ++S G + + +I+ GS
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVD----IFSAGCVFYYVISE--------GSHPFGK-S 233
Query: 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+ L +++ +I+ + DP++RPS +
Sbjct: 234 LQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAK 279
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 37/250 (14%), Positives = 89/250 (35%), Gaps = 39/250 (15%)
Query: 511 SVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLF 569
DW + S + +++ + N +G + P + + + +L
Sbjct: 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLK 149
Query: 570 EHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628
+ ++ + E + + L I + +A +E +H + HR+L+ S+I+ T D K+ D
Sbjct: 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGD 207
Query: 629 F----SFWNNTTAAKTGSAAM-----------------ELLETSAVDLESNVYSFGTILF 667
F + + + E + + + +++S G ILF
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267
Query: 668 EMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPD 727
E++ + E + + D+ + + +++++ + P
Sbjct: 268 ELLYSFSTQM-ERVRI-------------ITDVRNLKFPLLFTQKYPQEHMMVQDMLSPS 313
Query: 728 PKQRPSMRGI 737
P +RP I
Sbjct: 314 PTERPEATDI 323
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 5e-11
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 2/104 (1%)
Query: 157 NPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQL--SELKSIILRNNSFFGTIPKEIG 214
+ +E ++ + L+L + L L + L + L N+
Sbjct: 210 SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFA 269
Query: 215 ELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGIS 258
L +LE L +NN F F++ L L + IS
Sbjct: 270 WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSIS 313
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 2e-10
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+ L G L LS L + L +N F + +L EL+I+DLG NN +
Sbjct: 516 LARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTL 575
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
S F N SL +L L N + + ++
Sbjct: 576 PASVFNNQVSLKSLNLQKNL-ITSVEKKV 603
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 3e-10
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+LNL+ L + + L + L +NS + K L LDL N S
Sbjct: 77 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 136
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
+L LLL NN+ + + E
Sbjct: 137 KLGTQVQLENLQELLLSNNK-IQALKSEE 164
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 9e-10
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+ +LNL L + A + S+L S+ + N+ P+ +L L++L+L N S
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
F +LT L L +N + I
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNS-IQKIKNNP 116
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 9e-10
Identities = 18/94 (19%), Positives = 31/94 (32%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L++ + + +L LK + L++N K L L L N+
Sbjct: 52 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
+ F +L TL L +N L+
Sbjct: 112 IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 145
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELK--ELEILDLGFNNFS 230
L+L L QL L+ ++L NN +E+ L+ L+L N
Sbjct: 125 TLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
P F L L L+N Q LG E
Sbjct: 185 EFSPGCFHAIGRLFGLFLNNVQ-LGPSLTE 213
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 8e-09
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L+L + + + L ++ L +N T +L+ L+ L L N
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 233 FPSDFGNSF--SLTTLLLDNNQYLGGISPE 260
+ SL L L +NQ + SP
Sbjct: 161 KSEELDIFANSSLKKLELSSNQ-IKEFSPG 189
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 147 SDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFF 206
S++ + ++ + S + LNL + + + L L+ + L N
Sbjct: 361 SNSFTSLRTLTNETFVSLAHSPLHI--LNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418
Query: 207 GTIP-KEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
+ +E L+ + + L +N + + F SL L+L
Sbjct: 419 QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 3e-08
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 173 ILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
+L+L +G L E L + I L N + + L+ L L
Sbjct: 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 468
Query: 232 --PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
PS F +LT L L NN + I+ ++
Sbjct: 469 VDSSPSPFQPLRNLTILDLSNNN-IANINDDM 499
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 3e-08
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 173 ILNLRDLCLGGMLAPELG---QLSELKSIILRNNSFFGTIPKEIGELK--ELEILDLGFN 227
L L ++ LG L +L + ++++ L N+ T LK L +LDL +N
Sbjct: 199 GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258
Query: 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
N + F L L+ N + +
Sbjct: 259 NLNVVGNDSFAWLPQLEYFFLEYNN-IQHLFS 289
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 7e-08
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
+ + + L +N +L LD+GFN S P L L L +N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 252 QYLGGISPEL 261
+ L +S +
Sbjct: 84 E-LSQLSDKT 92
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 8e-08
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
ILNL + L ELK I L N+ L+ L+L N +
Sbjct: 540 ILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV 599
Query: 233 FPSDFGNSF-SLTTLLLDNNQYLGGIS 258
FG +F +LT L + N +
Sbjct: 600 EKKVFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-07
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 6/82 (7%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTTLLLDN 250
S L + L N L LE+LDLG N + ++ + L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 251 NQYLGGISPE----LHVLKVIS 268
N+ ++ + L+ +
Sbjct: 440 NK-YLQLTRNSFALVPSLQRLM 460
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSF--FGTIPKEIGELKELEILDLGFNNFS 230
+ L + + L+ ++LR + + P L+ L ILDL NN +
Sbjct: 434 EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 493
Query: 231 GPFPSDFGNSFSLTTLLLDNNQ 252
L L L +N
Sbjct: 494 NINDDMLEGLEKLEILDLQHNN 515
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-07
Identities = 16/76 (21%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Query: 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSF---SLT 244
++ S LK + L +N P + L L L S+
Sbjct: 166 DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIR 225
Query: 245 TLLLDNNQYLGGISPE 260
L L N+Q L S
Sbjct: 226 NLSLSNSQ-LSTTSNT 240
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-07
Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 11/99 (11%)
Query: 173 ILNLRD--LCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L LR L L L + L NN+ + L++LEILDL NN +
Sbjct: 458 RLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
Query: 231 --------GPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
G L L L++N I E+
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNG-FDEIPVEV 555
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-07
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGE---LKELEILDLGFNNF 229
L L + + L + L N ++ +++ + L L +
Sbjct: 175 KLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQL 234
Query: 230 SGPFPSDFGN--SFSLTTLLLDNNQYLGGISPE 260
S + F +LT L L N L + +
Sbjct: 235 STTSNTTFLGLKWTNLTMLDLSYNN-LNVVGND 266
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 7e-07
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNN---------SFFGTIPKEIGELKELE 220
++ L + + + L L ++ + L+ + S LK LE
Sbjct: 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE 332
Query: 221 ILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
L++ N+ G + F +L L L N+
Sbjct: 333 HLNMEDNDIPGIKSNMFTGLINLKYLSLSNSF 364
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
++ L + L L+ + + +N G L L+ L L + S
Sbjct: 309 KQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLR 368
Query: 233 F--PSDFGNSF--SLTTLLLDNNQYLGGISPE 260
F + L L L N+ + I +
Sbjct: 369 TLTNETFVSLAHSPLHILNLTKNK-ISKIESD 399
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 7e-11
Identities = 43/209 (20%), Positives = 75/209 (35%), Gaps = 47/209 (22%)
Query: 493 TVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNL---IGYCE 549
+ + + + Q ++I L K++H N V L +
Sbjct: 50 KLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPN 109
Query: 550 EDEPFTRMMVFEYSPNGSLFE---HLHIQEAEHLDWAMRL--RIAMGMAYCLEHMHQLTP 604
ED + MVFE G + E + E + A + G+ Y H +
Sbjct: 110 EDHLY---MVFELVNQGPVMEVPTLKPLSEDQ----ARFYFQDLIKGIEYL--HYQK--- 157
Query: 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN---------NTTAAKTGS---AAMELLETS- 651
I HR+++ S++ + ED KI+DF N + T G+ A E L +
Sbjct: 158 -IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV---GTPAFMAPESLSETR 213
Query: 652 ------AVDLESNVYSFGTILFEMITGRI 674
A+D V++ G L+ + G+
Sbjct: 214 KIFSGKALD----VWAMGVTLYCFVFGQC 238
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 7e-11
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 43/265 (16%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
GT G V G +G ++AV + + + S ++ + +++I L H + + L Y
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILN-RQKIR-SLDVVGKIKREIQNLKLFRHPHIIKL--Y 77
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMHQ 601
P MV EY G LF+++ ++E E A RL +I + YC H H
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME----ARRLFQQILSAVDYC--HRHM 131
Query: 602 LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KT--GS---AAMELLETSAV 653
+ HR+L+ ++ L AKI+DF N + +T GS AA E++
Sbjct: 132 ----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 654 D-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712
E +++S G IL+ ++ G + + E+ + + G + + ++ ++ +
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH--VPTLFKKIRGGVFYIPEYLNRSVA----TL 241
Query: 713 LEELLVVIKNCVHPDPKQRPSMRGI 737
L +L V DP +R +++ I
Sbjct: 242 LMHMLQV-------DPLKRATIKDI 259
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 8e-11
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
D +G+ G G V++ T ++G A +D + RK+I T+S +
Sbjct: 160 DIHEELGT---GAFGVVHRVTERATGNNFAAKFVMTPHESD-----KETVRKEIQTMSVL 211
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLRIAMGMA 593
H VNL E+D M++E+ G LFE + E + + +R
Sbjct: 212 RHPTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK-- 266
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDF---SFWNNTTAAKT--GSA--- 643
L HMH+ H +L+ +I T K+ DF + + + K G+A
Sbjct: 267 -GLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 323
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITG 672
A E+ E V ++++S G + + +++G
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVLSYILLSG 352
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 8e-11
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSF---------FGTIPKEIGELKELEILD 223
+ L + L L L EL+S+ + N + + + +++I
Sbjct: 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554
Query: 224 LGFNNFSG-PFPSDFGNSFSLTTLLLDNNQ 252
+G+NN P + L L +N+
Sbjct: 555 MGYNNLEEFPASASLQKMVKLGLLDCVHNK 584
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 2e-10
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 20/141 (14%)
Query: 123 SEGMALLRFRERVVRDPFGALSKWSDNDGVGDN-VNPCSWFGVECSDGKVVILNLRDLCL 181
+ AL E + W G +N ++ +W ++L +
Sbjct: 269 KDYKALKAIWEAL------DGKNWRYYSGTINNTIHSLNW------------NFNKELDM 310
Query: 182 -GGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNS 240
G +L + + L G +P IG+L EL++L G ++ +
Sbjct: 311 WGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEE 370
Query: 241 FSLTTLLLDNNQYLGGISPEL 261
+ ++
Sbjct: 371 LTPDMSEERKHRIRMHYKKMF 391
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 2e-10
Identities = 16/122 (13%), Positives = 41/122 (33%), Gaps = 26/122 (21%)
Query: 173 ILNLRDLCLGGM------LAPELGQLSELKSIILRNNSF-------------------FG 207
++L+D +G + ++ + +L++L+ I N+ F +
Sbjct: 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481
Query: 208 TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVI 267
LK+L ++L P + L +L + N+ + +
Sbjct: 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR-GISAAQLKADWTRL 540
Query: 268 SE 269
++
Sbjct: 541 AD 542
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 6e-09
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 185 LAPELGQLSELKSIILRNNSFFGTIPKE--IGELKELEILDLGFNNFSGPFPSDFGNSFS 242
LA + +++ + N+ P + ++ +L +LD N FG +
Sbjct: 540 LADDEDTGPKIQIFYMGYNNL-EEFPASASLQKMVKLGLLDCVHNKVR--HLEAFGTNVK 596
Query: 243 LTTLLLDNNQYLGGISPEL 261
LT L LD NQ + I +
Sbjct: 597 LTDLKLDYNQ-IEEIPEDF 614
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 6e-08
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGE-LKELEILDLGFNNFSG-PFPSDFGNSFSLT 244
G +L + L N IP++ ++E L N P + + + +
Sbjct: 589 EAFGTNVKLTDLKLDYNQI-EEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMG 647
Query: 245 TLLLDNNQYLGGISPEL 261
++ N+ +G +
Sbjct: 648 SVDFSYNK-IGSEGRNI 663
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 8e-08
Identities = 14/102 (13%), Positives = 24/102 (23%), Gaps = 9/102 (8%)
Query: 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSF-------FGTIPKEIGELKELEILDL 224
+ L + S + +IIL NN L +DL
Sbjct: 676 STVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDL 735
Query: 225 GFNNFSG-PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
FN + L+ + + N +
Sbjct: 736 RFNKLTSLSDDFRATTLPYLSNMDVSYNC-FSSFPTQPLNSS 776
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 8/96 (8%)
Query: 175 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS---- 230
+ + + + ++ L N + + + L N +
Sbjct: 655 KIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPE 714
Query: 231 ---GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHV 263
P ++ N++ LTT+ L N+ L +S +
Sbjct: 715 NSLKPKDGNYKNTYLLTTIDLRFNK-LTSLSDDFRA 749
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 181 LGGMLAPELGQLSELKSIILRNNSFFGTIPKEI--GELKELEILDLGFNNFSGPFPSDFG 238
L +I LR N ++ + L L +D+ +N FS FP+
Sbjct: 716 SLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPL 773
Query: 239 NSFSLTTLLLDNNQYLGG 256
NS L + + + G
Sbjct: 774 NSSQLKAFGIRHQRDAEG 791
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 13/88 (14%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILR------NNSFFGTIPKEIGELKELEILDL 224
L ++ + + S+LK+ +R N P I L L +
Sbjct: 754 YLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQI 813
Query: 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
G N+ L L + +N
Sbjct: 814 GSNDIRK-VDEKLTP--QLYILDIADNP 838
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 25/115 (21%)
Query: 176 LRDLCLGGMLAPELGQLSELKSIILRNNSF------FGTIPKEIGELKELEILDLGFNNF 229
L PE+ + + I L++ I K I L +L+I+ + F
Sbjct: 401 SDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPF 460
Query: 230 SGP-------------------FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
+ + N LT + L N + + L+ L
Sbjct: 461 TYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLP 515
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 4e-07
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 8/80 (10%)
Query: 188 ELGQLSELKSIILRNNSFFGTIPKEIG------ELKELEILDLGFNNFSGPFPSDFGNSF 241
+ + S+ N G+ + I + + L +N F
Sbjct: 639 NAKSVYVMGSVDFSYNKI-GSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGS 697
Query: 242 SLTTLLLDNNQYLGGISPEL 261
++T++L NN + I
Sbjct: 698 PISTIILSNNL-MTSIPENS 716
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 6e-07
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
L ++ +L + +N + G +L L L +N + + L
Sbjct: 567 ASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGL 624
Query: 247 LLDNNQ 252
+N+
Sbjct: 625 GFSHNK 630
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 39/209 (18%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
D +GS G G V++ ++G + D + + +I ++++
Sbjct: 54 DILEELGS---GAFGVVHRCVEKATGRVFVAKFINTPYPLD-----KYTVKNEISIMNQL 105
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLRIAMGMA 593
+H +NL E+ ++ E+ G LF+ + E + + +R A
Sbjct: 106 HHPKLINLHDAFEDKYEMV--LILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACE-- 160
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDF---SFWNNTTAAKT--GSA--- 643
L+HMH+ + I H +++ +I + + KI DF + N K +A
Sbjct: 161 -GLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITG 672
A E+++ V +++++ G + + +++G
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSG 246
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 39/258 (15%), Positives = 89/258 (34%), Gaps = 32/258 (12%)
Query: 515 RADWSKNLESQ--FRKKIDTLSKVNHKNFVNLIGYCEEDE-PFTRMMVFEYSPNGSLFEH 571
S + + +++ T ++ + V + + E D + + L
Sbjct: 68 SETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY---VDMRLINGVDLAAM 124
Query: 572 LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-- 629
++ L + I + L+ H HR+++ +I ++ D A + DF
Sbjct: 125 --LRRQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGI 180
Query: 630 -SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681
S + + G+ A E S +++Y+ +L+E +TG Y +
Sbjct: 181 ASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL 240
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR-PSMRGIAAK 740
S+ ++ + P + + + VI + +P+ R + ++A
Sbjct: 241 SV---MGAHIN-QAI------PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290
Query: 741 LKE-ITAMEPDGATPKLS 757
+ + D AT L
Sbjct: 291 AHAALATADQDRATDILR 308
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 23/109 (21%), Positives = 34/109 (31%), Gaps = 4/109 (3%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
NL+ L + L P + L +L+ + LR + P G L+ L L +
Sbjct: 207 NLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279
P D L L L L + + L I V
Sbjct: 267 LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L+LR P G + LK +IL++ S T+P +I L +LE LDL
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
PS + +L+ +
Sbjct: 293 LPSLIAQLPANCIILVPPHL 312
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+L+ + + L + Q + L+++ L N +P I L L L +
Sbjct: 105 HLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPEL 163
Query: 231 GPFPSDFGNSF---------SLTTLLLDNNQ 252
P ++ +L +L L+
Sbjct: 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTG 194
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 3/106 (2%)
Query: 165 ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224
+ + V L LR + L + +LS L+ + + +P + + LE L L
Sbjct: 77 DATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQFAGLETLTL 134
Query: 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEI 270
N P+ + L L + L + L E
Sbjct: 135 ARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 16/100 (16%), Positives = 28/100 (28%), Gaps = 5/100 (5%)
Query: 155 NVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSE--LKSIILRNNSFFGTIPKE 212
+ N + + I L A L ++ ++ LR+ P +
Sbjct: 42 DRNRWHSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPL-PQFPDQ 99
Query: 213 IGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
L L+ + + P L TL L N
Sbjct: 100 AFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNP 138
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 7e-07
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 185 LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT 244
+ E L L+S+ L ++P I L+ L+ L + + S + L
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGI-RSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232
Query: 245 TLLLDNNQYLGGISPEL 261
L L L P
Sbjct: 233 ELDLRGCTALRNYPPIF 249
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 61/282 (21%), Positives = 96/282 (34%), Gaps = 72/282 (25%)
Query: 488 DGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLI 545
+G+ K S AV K SK +E+ +K+I L H N V L
Sbjct: 21 EGSFSICRKCVHKKSNQAFAV-----KI---ISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPP 605
+ +V E G LFE I++ +H I + + HMH +
Sbjct: 73 EVFHDQLHTF--LVMELLNGGELFE--RIKKKKHFSETEASYIMRKLVSAVSHMHDVG-- 126
Query: 606 IAHRNLQSSSIYLT---EDYAAKISDF----SFWNNTTAAKT--GSA---AMELLETSAV 653
+ HR+L+ ++ T ++ KI DF + KT + A ELL +
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 654 DLESNVYSFGTILFEMITG-----------------RISYSIENGSL----ENWASEYLK 692
D +++S G IL+ M++G I I+ G E W +
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN---- 242
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
V K I+ + DP +R M
Sbjct: 243 --------VSQEAKDL-----------IQGLLTVDPNKRLKM 265
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 4e-10
Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 33/210 (15%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
+ +G G G V++ SS VK + +K+I L+
Sbjct: 8 MIAEDLGR---GEFGIVHRCVETSSKKTYMAKFVKVKGTD------QVLVKKEISILNIA 58
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMGM 592
H+N ++L E E M+FE+ +FE + A L + + + +
Sbjct: 59 RHRNILHLHESFESMEELV--MIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEAL 115
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDF---SFWNNTTAAKT--GSA-- 643
+ H H I H +++ +I KI +F + +
Sbjct: 116 QFL--HSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEY 169
Query: 644 -AMELLETSAVDLESNVYSFGTILFEMITG 672
A E+ + V ++++S GT+++ +++G
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 58/282 (20%), Positives = 103/282 (36%), Gaps = 63/282 (22%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ IG G+ G V SG ++AV ++ + ++ +
Sbjct: 45 LLLDSYVKIGE---GSTGIVCLAREKHSGRQVAVKMMDLRKQQR-----RELLFNEVVIM 96
Query: 534 SKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSL---FEHLHIQEAEHLDWAMRLRIA 589
H N V + Y +E + M E+ G+L + + E + IA
Sbjct: 97 RDYQHFNVVEMYKSYLVGEELWVLM---EFLQGGALTDIVSQVRLNEEQ---------IA 144
Query: 590 MGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--WNNTTAAKTGSA- 643
L ++H + HR+++S SI LT D K+SDF F + K S
Sbjct: 145 TVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 202
Query: 644 ------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
A E++ S E +++S G ++ EM+ G Y + P+
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF---------------SDSPV 247
Query: 698 K---DIVD---PTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+ + D P LK+ V L ++ + DP++R +
Sbjct: 248 QAMKRLRDSPPPKLKN-SHKVSPVLRDFLERMLVRDPQERAT 288
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 7e-10
Identities = 28/240 (11%), Positives = 63/240 (26%), Gaps = 40/240 (16%)
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDE-PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAM 584
+ LS+++ ++ +V E+ GSL E
Sbjct: 78 TLSRTLRLSRIDKPGVARVLDVVHTRAGGL---VVAEWIRGGSLQEVA----DTSPSPVG 130
Query: 585 RLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA 644
+R +A + H+ +A S + ++ D ++ +
Sbjct: 131 AIRAMQSLAAAADAAHRA--GVALSIDHPSRVRVSIDGDVVLAYPAT------------- 175
Query: 645 MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
+ + ++ G L+ ++ R +E QP
Sbjct: 176 -----MPDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP------IE 224
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPS------MRGIAAKLKEITAMEPDGATPKLSP 758
++ ++ V V D R + M+ A + P P +
Sbjct: 225 PADIDRDIPFQISAVAARSVQGDGGIRSASTLLNLMQQATAVADRTEVLGPIDEAPVSAA 284
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 7e-10
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSV-KSRADWSKNLESQFRKKIDTLSK 535
D +GS G V K S+G+E A +SRA + +++ L +
Sbjct: 15 DIGEELGS---GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMG 591
V H N + L E ++ E G LF+ + + E L + ++ I G
Sbjct: 72 VLHHNVITLHDVYENRTDVV--LILELVSGGELFD--FLAQKESLSEEEATSFIKQILDG 127
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAA-KISDF---SFWNNTTAAKT--GS 642
+ Y H + IAH +L+ +I L K+ DF + K G+
Sbjct: 128 VNYL--HTKK----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 643 A---AMELLETSAVDLESNVYSFGTILFEMITG 672
A E++ + LE++++S G I + +++G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 63/282 (22%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ ++ IG G GTVY +++G E+A+ +++ + +I +
Sbjct: 20 KKYTRFEKIGQ---GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-----IINEILVM 71
Query: 534 SKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLH---IQEAEHLDWAMRLRIA 589
+ + N VN + Y DE + M EY GSL + + + E + IA
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM---EYLAGGSLTDVVTETCMDEGQ---------IA 119
Query: 590 MGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM- 645
C LE +H + HR+++S +I L D + K++DF F T ++ + M
Sbjct: 120 AVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
Query: 646 --------ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
E++ A + +++S G + EMI G Y EN PL
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN---------------PL 222
Query: 698 KDIV------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+ + P L++ E + + C+ D ++R S
Sbjct: 223 RALYLIATNGTPELQN-PEKLSAIFRDFLNRCLEMDVEKRGS 263
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 31/213 (14%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDTLSK 535
D +GS G V K S+G+E A + RA + +++ L +
Sbjct: 15 DIGEELGS---GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMG 591
V H N + L E ++ E G LF+ + + E L + ++ I G
Sbjct: 72 VLHPNIITLHDVYENRTDVV--LILELVSGGELFD--FLAQKESLSEEEATSFIKQILDG 127
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLT----EDYAAKISDF---SFWNNTTAAKT--GS 642
+ Y H IAH +L+ +I L K+ DF + K G+
Sbjct: 128 VNYL----HTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 643 A---AMELLETSAVDLESNVYSFGTILFEMITG 672
A E++ + LE++++S G I + +++G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 37/216 (17%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSV-KSRADWSKNLESQFRKKIDTLSK 535
+ +GS G V K +G E A + + + ++++ L +
Sbjct: 8 EMGEELGS---GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMG 591
+ H N + L E ++ E G LF+ + E E L + L+ I G
Sbjct: 65 IRHPNIITLHDIFENKTDVV--LILELVSGGELFD--FLAEKESLTEDEATQFLKQILDG 120
Query: 592 MAYCLEHMHQLTPPIAHRNL-------QSSSIYLTEDYAAKISDF---SFWNNTTAAKT- 640
+ Y H + IAH +L + + K+ DF K
Sbjct: 121 VHYL--HSKR----IAHFDLKPENIMLLDKN---VPNPRIKLIDFGIAHKIEAGNEFKNI 171
Query: 641 -GSA---AMELLETSAVDLESNVYSFGTILFEMITG 672
G+ A E++ + LE++++S G I + +++G
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 56/295 (18%), Positives = 101/295 (34%), Gaps = 78/295 (26%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTS---TSVKSRADWSKNLESQFRKKIDTL 533
S +GS G G V + ++A+ + + +I+ L
Sbjct: 13 IMSKTLGS---GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF----EHLHIQEAEHLDWAMRL--R 587
K+NH + + + + ++ + +V E G LF + ++EA +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNKRLKEAT----CKLYFYQ 122
Query: 588 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF---SFWNNTTAAKT- 640
+ + + Y E+ I HR+L+ ++ L+ ED KI+DF T+ +T
Sbjct: 123 MLLAVQYLHENG------IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 641 -GS---AAMELLE-------TSAVDLESNVYSFGTILFEMITG-----------RISYSI 678
G+ A E+L AVD +S G ILF ++G + I
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVD----CWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 679 ENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
+G + E V +K + DPK R +
Sbjct: 233 TSGKYN-FIPEVW-------AEVSEKALDL-----------VKKLLVVDPKARFT 268
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 60/353 (16%), Positives = 105/353 (29%), Gaps = 110/353 (31%)
Query: 479 FSNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
+G G G V + + V +K A + ++ L
Sbjct: 26 LGKPLGR---GAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILI 80
Query: 535 KV-NHKNFVNLIGYC-EEDEPFTRMMVFEYSPNGSLFEHLH------------------- 573
+ +H N VNL+G C + P M++ E+ G+L +L
Sbjct: 81 HIGHHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQG 138
Query: 574 --IQEAEHLDWAMRL------RIAMGMAYCLEH-----------MHQLTPPIAHRNLQSS 614
A +D RL + + + E + +L
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICY 198
Query: 615 SI-------YLTE------DYAA-----------KISDFSF----WNNTTAAKTGSA--- 643
S +L D AA KI DF + + + G A
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 644 ----AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS--EYLKG--- 693
A E + ++S+V+SFG +L+E+ + G Y ++ LK
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVKIDEEFCRRLKEGTR 314
Query: 694 -EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745
P + E+ + +C H +P QRP+ + L +
Sbjct: 315 MRAP-------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 46/266 (17%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G+ G V T + ++A+ S + ++ + ++I L + H + + L
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFIS-RQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 548 CE-EDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
+ MV EY+ G LF+++ + E E R +I + YC H H
Sbjct: 78 ITTPTDIV---MVIEYA-GGELFDYIVEKKRMTEDE----GRRFFQQIICAIEYC--HRH 127
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KT--GS---AAMELLETSA 652
+ I HR+L+ ++ L ++ KI+DF N T KT GS AA E++
Sbjct: 128 K----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 653 VD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
E +V+S G +L+ M+ GR+ + E + N + + D + P +S
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEF--IPNLFKKVNSCVYVMPDFLSPGAQSL--- 238
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGI 737
+ ++V DP QR +++ I
Sbjct: 239 -IRRMIVA-------DPMQRITIQEI 256
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
GT G V G +G ++AV + + + S ++ + R++I L H + + L
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILN-RQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 548 CE-EDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
+ F MV EY G LF+++ + E E + RL +I G+ YC HM
Sbjct: 85 ISTPSDIF---MVMEYVSGGELFDYICKNGRLDEKE----SRRLFQQILSGVDYCHRHM- 136
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA---KT--GS---AAMELLETSA 652
+ HR+L+ ++ L AKI+DF N + +T GS AA E++
Sbjct: 137 -----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 191
Query: 653 VD-LESNVYSFGTILFEMITGR 673
E +++S G IL+ ++ G
Sbjct: 192 YAGPEVDIWSSGVILYALLCGT 213
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-09
Identities = 55/287 (19%), Positives = 99/287 (34%), Gaps = 66/287 (22%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSV-KSRADWSKNLESQFRKKIDTLSK 535
D +GS G V K S+G++ A ++++ +++ L +
Sbjct: 14 DTGEELGS---GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMG 591
+ H N + L E ++ E G LF+ + E E L + L+ I G
Sbjct: 71 IQHPNVITLHEVYENKTDVI--LILELVAGGELFD--FLAEKESLTEEEATEFLKQILNG 126
Query: 592 MAYCLEHMHQLTPPIAHRNL-------QSSSIYLTEDYAAKISDF---SFWNNTTAAKT- 640
+ Y H Q IAH +L + KI DF + K
Sbjct: 127 VYYL--HSLQ----IAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 641 -GSA---AMELLETSAVDLESNVYSFGTILFEMITG----------RISYSIENGSLENW 686
G+ A E++ + LE++++S G I + +++G ++ + E +
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE-F 236
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
EY K F I+ + DPK+R +
Sbjct: 237 EDEYFSN-------TSALAKDF-----------IRRLLVKDPKKRMT 265
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 4e-09
Identities = 56/294 (19%), Positives = 104/294 (35%), Gaps = 74/294 (25%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAV----TSTSVKSRADWSKNLESQFRKKIDT 532
+ I+G G V + + E AV + A+ + L K++D
Sbjct: 20 EPKEILGR---GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 533 LSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR- 587
L KV+ H N + L E + F +VF+ G LF++ + E L + +R
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFF--LVFDLMKKGELFDY--LTEKVTLSEKETRKIMRA 132
Query: 588 IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT--GS 642
+ + H I HR+L+ +I L +D K++DF + + G+
Sbjct: 133 LLEVICAL--HKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 186
Query: 643 A---AMELLETSAV------DLESNVYSFGTILFEMITG----------RISYSIENGSL 683
A E++E S E +++S G I++ ++ G + I +G+
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 684 ----ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
W D T+K + + P++R +
Sbjct: 247 QFGSPEW------------DDYSDTVKDL-----------VSRFLVVQPQKRYT 277
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 6e-09
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 53/284 (18%)
Query: 488 DGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLI 545
+G V L + E AV K ++ S+ ++++ L + H+N + LI
Sbjct: 23 EGAHARVQTCINLITSQEYAV-----KIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMGMAYCLEHMHQ 601
+ EE++ F +VFE GS+ HI + H + ++ ++ +A + + H
Sbjct: 78 EFFEEEDRF--YLVFEKMRGGSILS--HIHKRRHFNELEASVVVQDVASALDFL--HNKG 131
Query: 602 LTPPIAHRNLQSSSI-YLTEDYAA--KISDFSF-----------WNNTTAAKT--GSA-- 643
IAHR+L+ +I + + KI DF +T T GSA
Sbjct: 132 ----IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 644 -AMELLETSAV-----DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697
A E++E + D +++S G IL+ +++G + GS W
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ- 246
Query: 698 KDIVDPTLK---SFQE----NVLEELLVVIKNCVHPDPKQRPSM 734
+ + + F + ++ +I + D KQR S
Sbjct: 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 7e-09
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 6/150 (4%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
IG G+ G V + A+ + + + + ++ + K+
Sbjct: 29 HLKGAIGQ---GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
+H N L E+++ +V E G L + L++ + + + C
Sbjct: 86 HHPNIARLYEVYEDEQYIC--LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626
E + H +S E + I
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNI 173
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 58/293 (19%), Positives = 98/293 (33%), Gaps = 81/293 (27%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK- 535
+ IG G+ + ++ +E AV KS+ D ++I+ L +
Sbjct: 25 EVKEDIG---VGSYSVCKRCIHKATNMEFAVKIID-KSKRD--------PTEEIEILLRY 72
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMG 591
H N + L ++ + +V E G L + I + + + L I
Sbjct: 73 GQHPNIITLKDVYDDGKYVY--VVTELMKGGELLD--KILRQKFFSEREASAVLFTITKT 128
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSI-YLTEDYAA---KISDF----SFWNNTTAAKT--G 641
+ Y H + HR+L+ S+I Y+ E +I DF T
Sbjct: 129 VEYL--HAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 642 SA---AMELLETSAVDLESNVYSFGTILFEMITG-------------RISYSIENGSL-- 683
+A A E+LE D +++S G +L+ M+TG I I +G
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 684 --ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734
W + V T K + +H DP QR +
Sbjct: 243 SGGYW------------NSVSDTAKDL-----------VSKMLHVDPHQRLTA 272
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-08
Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 1/90 (1%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
V +NL+ + + S L+ + L +P + L L+ L L N F
Sbjct: 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFE 314
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
N SLT L + N +
Sbjct: 315 NLCQISASNFPSLTHLSIKGNTKRLELGTG 344
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-08
Identities = 21/89 (23%), Positives = 27/89 (30%), Gaps = 1/89 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L L L M L LK + + K LE L LG N+ S
Sbjct: 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
+ L L NN + +S E
Sbjct: 145 KLPKGFPTEKLKVLDFQNNA-IHYLSKED 172
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-07
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
NL L L + + L +++L N + K L+ L
Sbjct: 58 NLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGI 117
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
S N +L +L L +N + I
Sbjct: 118 SSIDFIPLHNQKTLESLYLGSNH-ISSIKLP 147
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 12/90 (13%), Positives = 20/90 (22%), Gaps = 1/90 (1%)
Query: 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L L + +L L + L + L+ L L N
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
+ +L L + I
Sbjct: 95 FMAETALSGPKALKHLFFIQTG-ISSIDFI 123
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEIG---ELKELEILDLGF 226
L+ L L + + + L L+ + L+ N F ++ L LEIL L F
Sbjct: 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSF 485
Query: 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
+ S F + + + L +N+ L S E
Sbjct: 486 CDLSSIDQHAFTSLKMMNHVDLSHNR-LTSSSIE 518
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 3/120 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L + + L L+S+ L +N + ++L++LD N
Sbjct: 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYL 168
Query: 233 FPSDFGNSFSLTTLLLD--NNQYLGGISPELHVLKVISEIQVDESWLTNAASRASCNSGL 290
D + T L L+ N + GI P V + + + NS +
Sbjct: 169 SKEDMSSLQQATNLSLNLNGND-IAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTI 227
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 1/100 (1%)
Query: 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN-N 228
+ L L + + P+ +LK + +NN+ +++ L++ L L N N
Sbjct: 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVIS 268
+S +L Q L I L + S
Sbjct: 190 DIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQS 229
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248
L L L+ ++L LK + +DL N + + + L L
Sbjct: 472 LQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNL 530
Query: 249 DNNQYLGGISPEL 261
+N + I P L
Sbjct: 531 ASNH-ISIILPSL 542
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 1/100 (1%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGP 232
LNL + + +L+ + L + L L++L+L +
Sbjct: 381 LNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDIS 440
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQV 272
F +L L L N + G + + L+ + +++
Sbjct: 441 SEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
+ + + N L L LDL F + L TL+L N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 252 QYLGGISPEL 261
L ++
Sbjct: 92 P-LIFMAETA 100
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 174 LNLRDLCLGGMLAPE-LGQLSELKSIILRNN--SFFGTIPKEIGELKELEILDLGFNNFS 230
L+++ L L L L+ + L ++ ++ L L+ L+L +N
Sbjct: 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
F L L L + L +
Sbjct: 390 SLKTEAFKECPQLELLDLAFTR-LKVKDAQ 418
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
IL L L + L + + L +N + + + LK + L+L N+ S
Sbjct: 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538
Query: 233 FPSDFGNSFSLTTLLLDNNQY 253
PS T+ L N
Sbjct: 539 LPSLLPILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 173 ILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
+L+L L A L LK + L ++ + + L L+ L+L N+F
Sbjct: 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463
Query: 232 PF---PSDFGNSFSLTTLLLDNNQYLGGISPE 260
+ L L+L L I
Sbjct: 464 GNIQKTNSLQTLGRLEILVLSFCD-LSSIDQH 494
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 29/199 (14%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V+K ++G+++A + D + + + +I +++++H N + L
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKD-----KEEVKNEISVMNQLDHANLIQLYDA 154
Query: 548 CEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMGMAYCLEHMHQLT 603
E +V EY G LF+ + I E+ +L D + ++ I G+ + H
Sbjct: 155 FESKNDIV--LVMEYVDGGELFDRI-IDESYNLTELDTILFMKQICEGIRHM--HQMY-- 207
Query: 604 PPIAHRNLQSSSIYLT--EDYAAKISDF---SFWNNTTAAKT--GSA---AMELLETSAV 653
I H +L+ +I + KI DF + K G+ A E++ V
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 654 DLESNVYSFGTILFEMITG 672
++++S G I + +++G
Sbjct: 266 SFPTDMWSVGVIAYMLLSG 284
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 56/270 (20%), Positives = 96/270 (35%), Gaps = 49/270 (18%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V + +AV RA + +K+I +NH+N V G+
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVD-MKRAV---DCPENIKKEICINKMLNHENVVKFYGH 73
Query: 548 CEEDEPFTRM-MVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
E + EY G LF+ + + E + A R ++ G+ Y H
Sbjct: 74 RREG---NIQYLFLEYCSGGELFDRIEPDIGMPEPD----AQRFFHQLMAGVVYL--HGI 124
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT--------GS---AAMELLE 649
I HR+++ ++ L E KISDF G+ A ELL+
Sbjct: 125 G----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 650 TSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVDPTLKS 707
+V+S G +L M+ G + + + S + ++ K +D +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
L ++LV +P R ++ I
Sbjct: 241 L----LHKILV-------ENPSARITIPDI 259
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 70/289 (24%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
E + + +G DG G VYK +G A KS + + +I+ L
Sbjct: 19 EVWEIVGELG---DGAFGKVYKAKNKETGALAAAKVIETKSEEELE-----DYIVEIEIL 70
Query: 534 SKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLH-----IQEAEHLDWAMRLR 587
+ +H V L+G Y + + + ++ E+ P G++ + + E +
Sbjct: 71 ATCDHPYIVKLLGAYYHDGKLW---IMIEFCPGGAVDAIMLELDRGLTEPQ--------- 118
Query: 588 IAMGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS 642
I + L +H I HR+L++ ++ +T + +++DF S N T K S
Sbjct: 119 IQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176
Query: 643 ------------AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690
E ++ + D +++++S G L EM + N
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN---------- 226
Query: 691 LKGEQPLKDIVD------PTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
P++ ++ PTL + E +K + +P+ RPS
Sbjct: 227 -----PMRVLLKIAKSDPPTLLT-PSKWSVEFRDFLKIALDKNPETRPS 269
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAM-RLRI 588
D +S+++H FV L + +D+ ++ Y+ NG L +++ ++ D R
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDD--EKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYT 136
Query: 589 A-MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS- 642
A + A LE++H I HR+L+ +I L ED +I+DF + A+ S
Sbjct: 137 AEIVSA--LEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 192
Query: 643 ------AAMELLE----TSAVDLESNVYSFGTILFEMITGR 673
+ ELL + DL ++ G I+++++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDL----WALGCIIYQLVAGL 229
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 4e-08
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
N++DL + P + LS L+ + + + L L +LD+ +
Sbjct: 67 NIKDLTINNIHATNYNP-ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
+ + ++ L N + I P
Sbjct: 126 DSILTKINTLPKVNSIDLSYNGAITDIMP 154
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 175 NLRDLCLGG-----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
NL L + G P L L+ L + + +++ +I +I L ++ +DL +N
Sbjct: 89 NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
L +L + + +
Sbjct: 149 IT-DIMPLKTLPELKSLNIQFDG-VHDYRG 176
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 6e-08
Identities = 52/276 (18%), Positives = 95/276 (34%), Gaps = 65/276 (23%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKK--IDTLSKVNHK--NFVN 543
G G+VY G +S + +A+ K R L + R + L KV+ +
Sbjct: 54 GGFGSVYSGIRVSDNLPVAIKHVE-KDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
Query: 544 LIGYCEEDEPFTRMMVFEY-SPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCL 596
L+ + E + F +++ E P LF+ + +QE A ++ + +C
Sbjct: 113 LLDWFERPDSF--VLILERPEPVQDLFDFITERGALQEEL----ARSFFWQVLEAVRHC- 165
Query: 597 EHMHQLTPPIAHRNLQSSSIYL-TEDYAAKISDFSFWNNT--TAAKT--GS---AAMELL 648
H + HR+++ +I + K+ DF T G+ + E +
Sbjct: 166 -HNCG----VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 220
Query: 649 ETSAVD-LESNVYSFGTILFEMITGRI----SYSIENGSLE--NWASEYLKGEQPLKDIV 701
+ V+S G +L++M+ G I I G + S
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS------------- 267
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
E +I+ C+ P RP+ I
Sbjct: 268 ------------SECQHLIRWCLALRPSDRPTFEEI 291
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 58/281 (20%), Positives = 112/281 (39%), Gaps = 64/281 (22%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
IG G+ G V+KG + +A+ ++ D +E +++I LS+ +
Sbjct: 30 IGK---GSFGEVFKGIDNRTQKVVAIKIIDLEEAED---EIED-IQQEITVLSQCDSPYV 82
Query: 542 VNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
G Y ++ + + M EY GS L + E LD I + L+++H
Sbjct: 83 TKYYGSYLKDTKLWIIM---EYLGGGSA---LDLLEPGPLDETQIATILREILKGLDYLH 136
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGSA-------AMELLETS 651
HR+++++++ L+E K++DF + T K + A E+++ S
Sbjct: 137 SEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 194
Query: 652 AVDLESNVYSFGTILFEMITG----------RISYSIENGSLENWASEYLKGEQP-LKDI 700
A D +++++S G E+ G ++ + I K P L+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI------------PKNNPPTLEGN 242
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
LK F ++ C++ +P RP+ A +L
Sbjct: 243 YSKPLKEF-----------VEACLNKEPSFRPT----AKEL 268
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 8e-08
Identities = 63/520 (12%), Positives = 140/520 (26%), Gaps = 183/520 (35%)
Query: 266 VISEIQVDESWLTNAASRASCNSGLFTWNKVQPGDNAFRRMLQQVTN---GFEAKRKASE 322
++S+ ++D + + S LF W + + ++ +++V F +E
Sbjct: 45 ILSKEEIDH--IIMSKDAVSGTLRLF-WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE 101
Query: 323 PSSSSSIASSPEPLVSPSLSPSM-SSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNIPIV 381
PS+ M ++ + + V+
Sbjct: 102 QRQ-------------PSMMTRMYIEQRDRLYNDNQ------------VFAKYNVSRL-- 134
Query: 382 SSPPHLHSAPTSFAASTPSQVHESLHKSKHHTVLVLAGIIG-GLSLILISAIGFFVCRSS 440
P+L ++ ++L + + +++ G++G G + + VC S
Sbjct: 135 --QPYL-------------KLRQALLELRPAKNVLIDGVLGSGKT-WVALD----VCLSY 174
Query: 441 KVVTVKP----WVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYK 496
KV W+ P+ L+ S SD
Sbjct: 175 KVQCKMDFKIFWLN--LKNCNS------PETVLEMLQKLLYQIDPNWTSRSDH------- 219
Query: 497 GTLSSGVEIAVTSTSVKSRADWSKN------LESQFRKKIDTLSKVNHKNFVNL--IGYC 548
S+++K R + + + L V + N + C
Sbjct: 220 ------------SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-C 266
Query: 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 608
++++ + + + L H+ L+H
Sbjct: 267 -------KILLT--TRFKQVTDFLSAATTTHI--------------SLDHHSMT------ 297
Query: 609 RNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFE 668
LT D + + L+ DL V +
Sbjct: 298 ---------LTPDEVKSL--LLKY---------------LDCRPQDLPREVLTTNPRRLS 331
Query: 669 MITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEEL---LVVIKNCVH 725
+I I + +NW +++ ++ L I++ +L + ++ L V H
Sbjct: 332 IIAESI--RDGLATWDNW--KHVNCDK-LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 726 PDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765
I L LS +W+ ++
Sbjct: 387 -----------IPTIL--------------LSLIWFDVIK 401
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 8e-08
Identities = 50/307 (16%), Positives = 96/307 (31%), Gaps = 69/307 (22%)
Query: 465 PKLKRSELEAACEDFSNIIGSFS------DGTVGTVYKGT-LSSGVEIAV---TSTSVKS 514
K ELE +S G G V+ E+ V V
Sbjct: 5 EPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 515 RADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE-YSPNGSLFEHL- 572
+ +I LS+V H N + ++ E F +V E + LF +
Sbjct: 65 DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFF--QLVMEKHGSGLDLFAFID 122
Query: 573 ---HIQEAEHLDWAMRL--RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627
+ E A + ++ + Y + I HR+++ +I + ED+ K+
Sbjct: 123 RHPRLDEPL----ASYIFRQLVSAVGYL--RLKD----IIHRDIKDENIVIAEDFTIKLI 172
Query: 628 DFSFWNNTTAAKT-----GS---AAMELLETSAVD-LESNVYSFGTILFEMITGRISY-- 676
DF K G+ A E+L + E ++S G L+ ++ +
Sbjct: 173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232
Query: 677 --SIENGSLE--NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
++ S +EL+ ++ + P P++R
Sbjct: 233 LEETVEAAIHPPYLVS-------------------------KELMSLVSGLLQPVPERRT 267
Query: 733 SMRGIAA 739
++ +
Sbjct: 268 TLEKLVT 274
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 28/201 (13%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIG 546
G V + S+G E A + R ++ ++ +I L +NL
Sbjct: 40 GKFAVVRQCISKSTGQEYAAKFLKKRRR---GQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMGMAYCLEHMHQL 602
E ++ EY+ G +F + AE + D ++ I G+ Y H +
Sbjct: 97 VYENTSEII--LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL--HQNN- 151
Query: 603 TPPIAHRNLQSSSIYL---TEDYAAKISDF---SFWNNTTAAKT--GSA---AMELLETS 651
I H +L+ +I L KI DF + + G+ A E+L
Sbjct: 152 ---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 652 AVDLESNVYSFGTILFEMITG 672
+ +++++ G I + ++T
Sbjct: 209 PITTATDMWNIGIIAYMLLTH 229
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 47/205 (22%), Positives = 74/205 (36%), Gaps = 37/205 (18%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGY 547
G G V + +AV RA + +K+I +NH+N V G+
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVD-MKRAV---DCPENIKKEICINKMLNHENVVKFYGH 73
Query: 548 CEEDEPFTRM-MVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYCLEHMH 600
E + EY G LF+ + + E + A R ++ G+ Y H
Sbjct: 74 RREG---NIQYLFLEYCSGGELFDRIEPDIGMPEPD----AQRFFHQLMAGVVYL--HGI 124
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT--------GS---AAMELLE 649
I HR+++ ++ L E KISDF G+ A ELL+
Sbjct: 125 G----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 650 TSAVD-LESNVYSFGTILFEMITGR 673
+V+S G +L M+ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE 205
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 56/289 (19%), Positives = 108/289 (37%), Gaps = 65/289 (22%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTS---TSVKSRADWSKNLESQFRKKIDTL 533
D ++IG G V + ++G E AV T+ + + + + R++ L
Sbjct: 97 DPKDVIGR---GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 534 SKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-I 588
+V H + + LI E +VF+ G LF++ + E L + +R +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMF--LVFDLMRKGELFDY--LTEKVALSEKETRSIMRSL 209
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF---SFWNNTTAAKT--GSA 643
+++ H + I HR+L+ +I L ++ ++SDF + G+
Sbjct: 210 LEAVSFL--HANN----IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 644 ---AMELLETSAV------DLESNVYSFGTILFEMITG----------RISYSIENGSLE 684
A E+L+ S E ++++ G ILF ++ G + I G +
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
++S D T+K I + DP+ R +
Sbjct: 324 -FSSPEW-------DDRSSTVKDL-----------ISRLLQVDPEARLT 353
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 1e-07
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 175 NLRDLCLGGML---APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
NL L L G L L +L ++ + N T + L L L L +N S
Sbjct: 67 NLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISD 124
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISP 259
S N + +L L N L +SP
Sbjct: 125 --ISPLANLTKMYSLNLGANHNLSDLSP 150
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 1e-06
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
L LS+L S+ L NN + IG L L L L N+ + P + + +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSA 338
Query: 247 LLDNNQ 252
N
Sbjct: 339 DFANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 3e-05
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 175 NLRDLCLGGML---APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L +L + +++ + I L LE L+L N +
Sbjct: 23 EGIRAVLQKASVTDVVTQEELESITKLVVAGEKV--ASIQGIEYLTNLEYLNLNGNQITD 80
Query: 232 PFPSDFGNSFSLTTLLLDNNQ 252
S N LT L + N+
Sbjct: 81 --ISPLSNLVKLTNLYIGTNK 99
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-05
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+L + + ++ L S+ + NN T + L +L L++G N S
Sbjct: 200 SLHYFTAYVNQITDI-TPVANMTRLNSLKIGNNKI--TDLSPLANLSQLTWLEIGTNQIS 256
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
+ + L L + +NQ + IS
Sbjct: 257 D--INAVKDLTKLKMLNVGSNQ-ISDISV 282
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 5e-05
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
L ++ L + + + I L +L L L +N S + SL
Sbjct: 149 SPLSNMTGLNYLTVTESKV--KDVTPIANLTDLYSLSLNYNQIED--ISPLASLTSLHYF 204
Query: 247 LLDNNQYLGGISP--ELHVLKVIS 268
NQ + I+P + L +
Sbjct: 205 TAYVNQ-ITDITPVANMTRLNSLK 227
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSG 231
L++ L+ L ++ + NSF + L LDL
Sbjct: 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQ 487
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
F L L + +N L +
Sbjct: 488 ISWGVFDTLHRLQLLNMSHNN-LLFLDSSH 516
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Query: 173 ILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L + + L + L L L++L++ NN
Sbjct: 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF 511
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
S + +SL+TL N+ + L
Sbjct: 512 LDSSHYNQLYSLSTLDCSFNR-IETSKGIL 540
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
+L +L L G +P L+ L++++ IG+L L+ L++ N
Sbjct: 81 HLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 140
Query: 230 SG-PFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
P+ F N +L + L N + I+
Sbjct: 141 HSCKLPAYFSNLTNLVHVDLSYNY-IQTITVN 171
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 174 LNLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKE-IGELKELEILDLGFNN 228
+LR L L +++ L EL+ + ++++ L++L LD+ + N
Sbjct: 376 NSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTN 435
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
F F SL TL + N + +
Sbjct: 436 TKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-07
Identities = 14/65 (21%), Positives = 20/65 (30%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248
L L+ + + +N+ +L L LD FN SL L
Sbjct: 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNL 552
Query: 249 DNNQY 253
NN
Sbjct: 553 TNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 16/80 (20%), Positives = 25/80 (31%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L+L + + L L ++IL N P L LE L +
Sbjct: 60 WLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASL 119
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
G +L L + +N
Sbjct: 120 ESFPIGQLITLKKLNVAHNF 139
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-07
Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248
SEL+ + L K L L L L N P F SL L+
Sbjct: 52 FSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111
Query: 249 DNNQYLGGISPEL 261
+ L +
Sbjct: 112 VETK-LASLESFP 123
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG-TIPKEIGELKELEILDLGFNNFSGP 232
L + L + + +GQL LK + + +N +P L L +DL +N
Sbjct: 109 LVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168
Query: 233 FPSDFGN----SFSLTTLLLDNNQYLGGISPEL 261
+D +L + N + I +
Sbjct: 169 TVNDLQFLRENPQVNLSLDMSLNP-IDFIQDQA 200
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-05
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 193 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
S K+I L N EL+ LDL + L+ L+L N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 253 YLGGISPEL 261
+ SP
Sbjct: 92 -IQSFSPGS 99
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 17/97 (17%), Positives = 25/97 (25%), Gaps = 11/97 (11%)
Query: 175 NLRDLCLGG------MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKEL----EILDL 224
L+ L + L L+ L + L N ++ L+E LD+
Sbjct: 129 TLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188
Query: 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
N L L L N I
Sbjct: 189 SLNPIDF-IQDQAFQGIKLHELTLRGNFNSSNIMKTC 224
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 61/311 (19%), Positives = 121/311 (38%), Gaps = 73/311 (23%)
Query: 456 LQKAFVTGVPKLKRSELEAAC------EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIA 506
L+ + P+ + +L+ E F + +G G+ G+VYK +G +A
Sbjct: 2 LETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGE---GSYGSVYKAIHKETGQIVA 58
Query: 507 VTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPN 565
+ V+S + K+I + + + + V G Y + + + M EY
Sbjct: 59 IKQVPVESD-------LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM---EYCGA 108
Query: 566 GSLFEHLH-----IQEAEHLDWAMRLRIAMGMAYC---LEHMHQLTPPIAHRNLQSSSIY 617
GS+ + + + E E IA + LE++H + HR++++ +I
Sbjct: 109 GSVSDIIRLRNKTLTEDE---------IATILQSTLKGLEYLHFMR--KIHRDIKAGNIL 157
Query: 618 LTEDYAAKISDF--SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFE 668
L + AK++DF + T AK + A E+++ + ++++S G E
Sbjct: 158 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217
Query: 669 MITGRISYSIENGSLENWASEYLKGEQPLKDIVD------PTLKSFQENVLEELLVVIKN 722
M G+ Y+ + P++ I PT + E + +K
Sbjct: 218 MAEGKPPYADIH---------------PMRAIFMIPTNPPPTFRK-PELWSDNFTDFVKQ 261
Query: 723 CVHPDPKQRPS 733
C+ P+QR +
Sbjct: 262 CLVKSPEQRAT 272
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 52/283 (18%), Positives = 97/283 (34%), Gaps = 62/283 (21%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
+G G V + + +G E A + K S + ++ +
Sbjct: 14 QLFEELGK---GAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLL 67
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHL---DWAMRLR-IAMGM 592
H N V L E+ ++F+ G LFE I E+ D + ++ I +
Sbjct: 68 KHPNIVRLHDSISEEGHHY--LIFDLVTGGELFE--DIVAREYYSEADASHCIQQILEAV 123
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDF----SFWNNTTAAKT--GSA 643
+C H + HRNL+ ++ L + A K++DF A G+
Sbjct: 124 LHC--HQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 644 ---AMELLETSAVDLESNVYSFGTILFEMITG----------RISYSIENGSLENWASEY 690
+ E+L ++++ G IL+ ++ G R+ I+ G+ + + S
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD-FPSPE 236
Query: 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
D V P K I + +P +R +
Sbjct: 237 W-------DTVTPEAKDL-----------INKMLTINPSKRIT 261
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 5e-07
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L+ L L + PE + + I LRNN I K + + LE DL N F
Sbjct: 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL-VLIEKALRFSQNLEHFDLRGNGFH 250
Query: 231 -GPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
G F + + T+ + L G + E
Sbjct: 251 CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248
L+ + L+ N + + ++ +L+ LDL N + +F ++ +T + L
Sbjct: 165 AASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221
Query: 249 DNNQYLGGISPELHVLKVISEIQVD 273
NN+ L I L + + +
Sbjct: 222 RNNK-LVLIEKALRFSQNLEHFDLR 245
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
I + D L LA +K + L N ++ +LE+L+L N
Sbjct: 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE- 72
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
D + +L TL L+NN
Sbjct: 73 -TLDLESLSTLRTLDLNNNY 91
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTL 246
+ K+I L NN + G ++ LDL N F +S +L L
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 247 LLDNNQ 252
L N
Sbjct: 175 NLQYNF 180
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 175 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP 234
LR L L EL ++++ NN+ + + + + L N +
Sbjct: 81 TLRTLDLNNNYVQELLVGPSIETLHAANNNI-SRVSCSR--GQGKKNIYLANNKITMLRD 137
Query: 235 SDFGNSFSLTTLLLDNNQ 252
D G + L L N+
Sbjct: 138 LDEGCRSRVQYLDLKLNE 155
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 12/61 (19%), Positives = 21/61 (34%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
+ K + ++S + ++ LDL N S +D L L L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 252 Q 252
Sbjct: 69 V 69
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 54/295 (18%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+D+ IGS G V ++A+ +++ +++ K+I +
Sbjct: 15 DDYELQEVIGS---GATAVVQAAYCAPKKEKVAIKRINLEKCQT---SMDE-LLKEIQAM 67
Query: 534 SKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLR---IA 589
S+ +H N V+ + +DE + M + GS+ + + A+ + L IA
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVM---KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124
Query: 590 MGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGSA- 643
+ LE++H+ HR++++ +I L ED + +I+DF S + T T +
Sbjct: 125 TILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 644 -----------AMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS-----LENW 686
A E++E D +++++SFG E+ TG Y
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
L+ K+++ KSF++ +I C+ DP++RP+ AA+L
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRK--------MISLCLQKDPEKRPT----AAEL 285
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 6e-07
Identities = 60/320 (18%), Positives = 116/320 (36%), Gaps = 57/320 (17%)
Query: 457 QKAFVTGVPKLKRSELEAACEDFSNI--IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVK 513
Q+ + K+ E +DF I +G+ G G V+K + SG+ +A K
Sbjct: 13 QRKRLEAFLTQKQKVGELKDDDFEKISELGA---GNGGVVFKVSHKPSGLVMAR-----K 64
Query: 514 S-RADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEH 571
+ + +Q +++ L + N V G + + E + E+ GSL +
Sbjct: 65 LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS---ICMEHMDGGSLDQV 121
Query: 572 LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-- 629
L ++A + + ++++ + L ++ + I HR+++ S+I + K+ DF
Sbjct: 122 L--KKAGRIPEQILGKVSIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGV 178
Query: 630 SFWNNTTAAKT--GSAA-M--ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE 684
S + A + G+ + M E L+ + ++S+++S G L EM GR +
Sbjct: 179 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
Query: 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLE----------ELLVVIKN------------ 722
+ P N ELL I N
Sbjct: 239 ELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS 298
Query: 723 ---------CVHPDPKQRPS 733
C+ +P +R
Sbjct: 299 LEFQDFVNKCLIKNPAERAD 318
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-07
Identities = 48/209 (22%), Positives = 79/209 (37%), Gaps = 39/209 (18%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
IGS G G + +AV R ++ +++I + H N
Sbjct: 28 IGS---GNFGVARLMRDKLTKELVAVK---YIER---GAAIDENVQREIINHRSLRHPNI 78
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAYC 595
V P ++ EY+ G L+E + E E A ++ G++YC
Sbjct: 79 VRFKEVILT--PTHLAIIMEYASGGELYERICNAGRFSEDE----ARFFFQQLLSGVSYC 132
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAA--KISDFSFWNNTT---AAKT--GS---AAM 645
H Q I HR+L+ + L A KI DF + ++ K+ G+ A
Sbjct: 133 --HSMQ----ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
Query: 646 ELLETSAVD-LESNVYSFGTILFEMITGR 673
E+L D ++V+S G L+ M+ G
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 47/220 (21%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLD-WAMRLRIA- 589
+ + H VNL Y +DE M MV + G L HL Q+ H ++L I
Sbjct: 69 MQGLEHPFLVNLW-YSFQDE--EDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFICE 123
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGSA- 643
+ MA L+++ I HR+++ +I L E I+DF+ G+
Sbjct: 124 LVMA--LDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 644 --AMELLE-------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE 694
A E+ + AVD +S G +E++ GR Y +++
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDW----WSLGVTAYELLRGRRPY-------------HIRSS 222
Query: 695 QPLKDIVDPTLKS---FQENVLEELLVVIKNCVHPDPKQR 731
K+IV + + +E++ ++K + P+P QR
Sbjct: 223 TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-06
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
+L L L G LA LS L+ ++ + IG LK L+ L++ N
Sbjct: 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136
Query: 230 -SGPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
S P F N +L L L +N+ + I
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNK-IQSIYCT 167
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 9e-06
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247
LS L+ + + NSF +I EL+ L LDL P+ F + SL L
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 248 LDNNQ 252
+ +NQ
Sbjct: 501 MASNQ 505
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 6e-05
Identities = 16/80 (20%), Positives = 28/80 (35%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
+L+L + + LS L ++IL N L L+ L N +
Sbjct: 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 115
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
G+ +L L + +N
Sbjct: 116 ENFPIGHLKTLKELNVAHNL 135
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 3/82 (3%)
Query: 173 ILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFS 230
+L + P+ +L L + L + L L++L++ N
Sbjct: 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL-EQLSPTAFNSLSSLQVLNMASNQLK 507
Query: 231 GPFPSDFGNSFSLTTLLLDNNQ 252
F SL + L N
Sbjct: 508 SVPDGIFDRLTSLQKIWLHTNP 529
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNF 229
+L+ L L ++ L +L+ + ++++ + L+ L LD+ +
Sbjct: 374 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
F F SL L + N + P++
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-04
Identities = 12/64 (18%), Positives = 15/64 (23%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248
EL+ + L L L L L N F SL L+
Sbjct: 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107
Query: 249 DNNQ 252
Sbjct: 108 VETN 111
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSF-FGTIPKEIGELKELEILDLGFNNFSG 231
L + L + +G L LK + + +N +P+ L LE LDL N
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 232 PFPSDFGNSFSLT----TLLLDNNQYLGGISPE 260
+ +D + +L L N + I P
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNP-MNFIQPG 195
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 8/88 (9%)
Query: 175 NLRDLCLGGML---APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
NL + L L++L I++ NN + L L L L N +
Sbjct: 69 NLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI--ADITPLANLTNLTGLTLFNNQITD 126
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISP 259
P N +L L L +N + IS
Sbjct: 127 IDP--LKNLTNLNRLELSSNT-ISDISA 151
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 175 NLRDLCLGG---MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
NL L L L L+ L+ + N T K + L LE LD+ N S
Sbjct: 135 NLNRLELSSNTISDISALSGLTSLQQLSFGNQV---TDLKPLANLTTLERLDISSNKVSD 191
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISP 259
S +L +L+ NNQ + I+P
Sbjct: 192 --ISVLAKLTNLESLIATNNQ-ISDITP 216
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 6e-06
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
LG L+ L + L N + L L LDL N S + LT L
Sbjct: 215 TPLGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLANNQISN--LAPLSGLTKLTEL 270
Query: 247 LLDNNQYLGGISP 259
L NQ + ISP
Sbjct: 271 KLGANQ-ISNISP 282
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
+V L L + + + L+ L I NN P + L +L + + N
Sbjct: 47 QVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQI 102
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISP 259
+ P N +LT L L NNQ + I P
Sbjct: 103 ADITP--LANLTNLTGLTLFNNQ-ITDIDP 129
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 175 NLRDLCLGG-MLA--PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG 231
L +L LG ++ L L+ L ++ L N P I LK L L L FNN S
Sbjct: 266 KLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323
Query: 232 PFPSDFGNSFSLTTLLLDNNQYLGGISP 259
S + L L NN+ + +S
Sbjct: 324 --ISPVSSLTKLQRLFFYNNK-VSDVSS 348
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
+ L++L+ + NN + + L + L G N S P N +T L
Sbjct: 325 SPVSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 380
Query: 247 LLDNNQ 252
L++
Sbjct: 381 GLNDQA 386
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 9/66 (13%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
L L+ + + +N P + L + L L ++ P ++ + S+
Sbjct: 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVNYKANVSIPNT 403
Query: 247 LLDNNQ 252
+ +
Sbjct: 404 VKNVTG 409
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
I + D L LA +K + L N ++ +LE+L+L N
Sbjct: 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE- 72
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
D + +L TL L+NN
Sbjct: 73 -TLDLESLSTLRTLDLNNNY 91
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 8e-06
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L+ L L + PE + + I LRNN I K + + LE DL N F
Sbjct: 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL-VLIEKALRFSQNLEHFDLRGNGFH 250
Query: 231 -GPFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
G F + + T+ + L G + E
Sbjct: 251 CGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 8e-06
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 2/75 (2%)
Query: 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246
++LK++ L +N + E + + L N S +L
Sbjct: 185 KGQVVFAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242
Query: 247 LLDNNQYLGGISPEL 261
L N + G +
Sbjct: 243 DLRGNGFHCGTLRDF 257
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTL 246
+ K+I L NN + G ++ LDL N F +S +L L
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 247 LLDNNQ 252
L N
Sbjct: 175 NLQYNF 180
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 12/61 (19%), Positives = 21/61 (34%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
+ K + ++S + ++ LDL N S +D L L L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 252 Q 252
Sbjct: 69 V 69
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 2e-04
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 175 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP 234
LR L L EL ++++ NN+ + + + + L N +
Sbjct: 81 TLRTLDLNNNYVQELLVGPSIETLHAANNNI-SRVSCSR--GQGKKNIYLANNKITMLRD 137
Query: 235 SDFGNSFSLTTLLLDNNQ 252
D G + L L N+
Sbjct: 138 LDEGCRSRVQYLDLKLNE 155
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 47/251 (18%), Positives = 82/251 (32%), Gaps = 64/251 (25%)
Query: 464 VPKLKRSELEAACEDFSNIIGSF-SDGTVGTVYKG---TLSSGVEIAVTSTSVKSRADWS 519
K+K S ED G GT G VYK + A+ +
Sbjct: 6 DFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALK----QIEGT-- 59
Query: 520 KNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEH--LHIQEA 577
+ ++I L ++ H N ++L ++F+Y EH HI +
Sbjct: 60 -GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY------AEHDLWHIIKF 112
Query: 578 EHLDWAMRLRIAM--------------GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623
A + + + G+ Y H + + HR+L+ ++I + +
Sbjct: 113 HRASKANKKPVQLPRGMVKSLLYQILDGIHYL--HANW----VLHRDLKPANILVMGEGP 166
Query: 624 A----KISDF----SFWNNTTAAKTGSA--------AMELLE-----TSAVDLESNVYSF 662
KI+D F + A ELL T A+D +++
Sbjct: 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID----IWAI 222
Query: 663 GTILFEMITGR 673
G I E++T
Sbjct: 223 GCIFAELLTSE 233
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 5e-06
Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 5/249 (2%)
Query: 8 DSYKKTNANPTSLDPSFNSLETKAFRLAPQTHVLSLHIFFHFILFLSSLKLGLVVDIIIL 67
+ + LD ++ + LH+ FH S V + L
Sbjct: 164 LPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHL 223
Query: 68 Q-TPVQTKLHIICYQYCYHLGMNQPCRFHRLRLNMAALTLVMLLFLQNLSLARCLNSEGM 126
Q + ++ + + + + L T + L R + +
Sbjct: 224 QLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283
Query: 127 ALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWF---GVECSDGKVVILNLRDLCLGG 183
L ER+ R+ F + + N F + ++ I L
Sbjct: 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343
Query: 184 MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSL 243
+ S + N F ++ + LK L+ L L N F + ++
Sbjct: 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN-FFKVALMTKNM 402
Query: 244 TTLLLDNNQ 252
++L +
Sbjct: 403 SSLETLDVS 411
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 7e-04
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 191 QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF-SGPFPSDFGNSFSLTTLLLD 249
+L+ + + +N I + L LDL FN+F P +FGN LT L L
Sbjct: 98 FNQDLEYLDVSHNRL-QNIS--CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLS 154
Query: 250 NNQ 252
+
Sbjct: 155 AAK 157
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 33/161 (20%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAM-RLR--- 587
L+KV+ + V+L Y E + T + +V G + H++ + ++ + R
Sbjct: 239 LAKVHSRFIVSLA-YAFETK--TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 588 --IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF------SFWNNTTAAK 639
I G LEH+HQ I +R+L+ ++ L +D +ISD T
Sbjct: 296 AQIVSG----LEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 640 TGSA---AMELLE----TSAVDLESNVYSFGTILFEMITGR 673
G+ A ELL +VD ++ G L+EMI R
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDY----FALGVTLYEMIAAR 386
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 56/272 (20%), Positives = 101/272 (37%), Gaps = 55/272 (20%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKK--IDTLSKVN----HKNF 541
G GTV+ G L+ +++A+ ++R L + L KV H
Sbjct: 42 GGFGTVFAGHRLTDRLQVAIKVIP-RNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV 100
Query: 542 VNLIGYCEEDEPFTRMMVFEY-SPNGSLFEHL----HIQEAEHLDWAMRL--RIAMGMAY 594
+ L+ + E E F M+V E P LF+++ + E + ++ + +
Sbjct: 101 IRLLDWFETQEGF--MLVLERPLPAQDLFDYITEKGPLGEGP----SRCFFGQVVAAIQH 154
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYL-TEDYAAKISDFSFWNNT--TAAKT--GS---AAME 646
C H + HR+++ +I + AK+ DF G+ + E
Sbjct: 155 C--HSRG----VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPE 208
Query: 647 LLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
+ L + V+S G +L++M+ G I + + E L+ E V P
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EILEAELHFPAHVSPDC 260
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ I+ C+ P P RPS+ I
Sbjct: 261 CAL-----------IRRCLAPKPSSRPSLEEI 281
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 8e-06
Identities = 42/259 (16%), Positives = 70/259 (27%), Gaps = 10/259 (3%)
Query: 3 RRASQDSYKKTNANPTSLDPSFNSLETKAFRLAPQTHVLSLHI------FFHFILFLSSL 56
++S N + L E + + SLHI FHFIL +S
Sbjct: 128 EKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVK 187
Query: 57 KLGLVVDIIILQTPVQTKLHIICYQYCYHLGMNQPCRFHRLRLNMAALTLVMLLFLQNLS 116
+ + I K + + + + +L L +
Sbjct: 188 TVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHT 247
Query: 117 LARCLNSEGMALLR-FRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILN 175
+ + L R +L S + V +V + + I N
Sbjct: 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQ-VVSDVFGFPQSYIYEIFSNMNIKN 306
Query: 176 LRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS--GPF 233
+ ++S + NN T+ + G L ELE L L N
Sbjct: 307 FTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKI 366
Query: 234 PSDFGNSFSLTTLLLDNNQ 252
SL L + N
Sbjct: 367 AEMTTQMKSLQQLDISQNS 385
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 8e-06
Identities = 61/283 (21%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKN 540
+G+ GT G VYKG + +G A+ V + E + +++I+ L K +H+N
Sbjct: 32 VGN---GTYGQVYKGRHVKTGQLAAIKVMDVTG------DEEEEIKQEINMLKKYSHHRN 82
Query: 541 FVNLIG-YCEEDEPFTRM---MVFEYSPNGSLFEHLHIQEAEHL--DW-AMRLR-IAMGM 592
G + +++ P +V E+ GS+ + + + L +W A R I G
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG- 141
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWNNTTAAKTGS-------- 642
L H+HQ + HR+++ ++ LTE+ K+ DF S + T + +
Sbjct: 142 ---LSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 643 ----AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698
A + + D +S+++S G EM G P++
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC---------------DMHPMR 241
Query: 699 DIVD------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+ P LKS + ++ I++C+ + QRP+
Sbjct: 242 ALFLIPRNPAPRLKS--KKWSKKFQSFIESCLVKNHSQRPATE 282
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 32/215 (14%), Positives = 79/215 (36%), Gaps = 40/215 (18%)
Query: 489 GTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIG- 546
+ TV +G + V ++++ ++ + + + ++ NH N V
Sbjct: 38 EDLMTVNLARYKPTGEYVTVRRINLEACSN--EMVT-FLQGELHVSKLFNHPNIVPYRAT 94
Query: 547 YCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC------LEHMH 600
+ ++E + +V + GS + + + ++ L IA L+++H
Sbjct: 95 FIADNELW---VVTSFMAYGSAKDLICTHFMDGMN---ELAIA---YILQGVLKALDYIH 145
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSA-------A 644
+ HR++++S I ++ D +S + +
Sbjct: 146 HMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203
Query: 645 MELLETSAV--DLESNVYSFGTILFEMITGRISYS 677
E+L+ + D +S++YS G E+ G + +
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-05
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLR---- 587
L KVN + V+L Y E + + +V G L H++ A R
Sbjct: 238 LEKVNSRFVVSLA-YAYETK--DALCLVLTLMNGGDLKFHIYHMGQAGFPEA-RAVFYAA 293
Query: 588 -IAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----SFWNNTTAAKTG 641
I G LE +H+ I +R+L+ +I L + +ISD T + G
Sbjct: 294 EICCG----LEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 642 SA---AMELLE----TSAVDLESNVYSFGTILFEMITGR 673
+ A E+++ T + D ++ G +L+EMI G+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDW----WALGCLLYEMIAGQ 382
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-05
Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 16/95 (16%)
Query: 175 NLRDLCLGGM----LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
++ L + L +L L + N ++P L EL I +
Sbjct: 62 HITTLVIPDNNLTSLPALPPELRTL---EVSGNQL-TSLPVLPPGLLELSIFSNPLTHLP 117
Query: 231 GPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
PS L L + NQ L + L+
Sbjct: 118 -ALPS------GLCKLWIFGNQ-LTSLPVLPPGLQ 144
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 9e-05
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 12/82 (14%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L++L + G L +L EL ++ N ++P L L + N +
Sbjct: 222 GLKELIVSGNRLTSLPVLPSELKEL---MVSGN-RLTSLPMLPSGLLSL---SVYRNQLT 274
Query: 231 GPFPSDFGNSFSLTTLLLDNNQ 252
P + S TT+ L+ N
Sbjct: 275 R-LPESLIHLSSETTVNLEGNP 295
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 2e-04
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 16/97 (16%)
Query: 173 ILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228
L L L L EL + +N ++P EL +L + +
Sbjct: 160 PSELCKLWAYNNQLTSLPMLPSGLQEL---SVSDNQL-ASLPTLPSELYKLWAYNNRLTS 215
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
P+ L L++ N+ L + LK
Sbjct: 216 ----LPALPSG---LKELIVSGNR-LTSLPVLPSELK 244
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKE-IGELKELEILDLGFNN 228
NL+ L L + + L L+ + L +N ++ G L L+ L+L N
Sbjct: 51 NLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL-SSLSSSWFGPLSSLKYLNLMGNP 109
Query: 229 FSG-PFPSDFGNSFSLTTLLLDNNQYLGGISPE 260
+ S F N +L TL + N + I
Sbjct: 110 YQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRI 142
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGE-LKELEILDLGFNNFS- 230
L++ L L+ L ++K I + N+ F +P + LK LE LDL N
Sbjct: 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVE 348
Query: 231 --GPFPSDFGNSFSLTTLLLDNNQ 252
+ G SL TL+L N
Sbjct: 349 EYLKNSACKGAWPSLQTLVLSQNH 372
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 191 QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250
L L S+ + N+F +P +++ L+L L L + N
Sbjct: 385 TLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLDVSN 440
Query: 251 NQYLGGISPELHVLKVI 267
N L S L L+ +
Sbjct: 441 NN-LDSFSLFLPRLQEL 456
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247
L + L+ +IL+++ TI + L LE LDL N+ S S FG SL L
Sbjct: 46 LRACANLQVLILKSSRI-NTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104
Query: 248 LDNNQY 253
L N Y
Sbjct: 105 LMGNPY 110
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 20/103 (19%)
Query: 165 ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224
+C D + L L +L L L L L + NS +P+ LK L + +
Sbjct: 67 DCLDRQAHELELNNLGLS-SLPELPPHLESL---VASCNSL-TELPELPQSLKSLLVDNN 121
Query: 225 GFNNFSGPFPS---------------DFGNSFSLTTLLLDNNQ 252
S P + NS L + +DNN
Sbjct: 122 NLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNS 164
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 5e-05
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 13/99 (13%)
Query: 173 ILNLRDLCLGG---MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229
L+L + G PEL L L +I NN T+P L+ L + D +
Sbjct: 214 PLSLESIVAGNNILEELPELQNLPFLTTIYADNNLL-KTLPDLPPSLEALNVRDNYLTD- 271
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQY--LGGISPELHVLKV 266
P + LT L + N + L + P L+ L
Sbjct: 272 ---LPELPQS---LTFLDVSENIFSGLSELPPNLYYLNA 304
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 28/163 (17%)
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAE-HLDWAMRLRI 588
D L + + L + +DE + +V EY G L L + A R +
Sbjct: 113 DVLVNGDRRWITQLH-FAFQDE--NYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-RFYL 168
Query: 589 A-MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKT-- 640
A + MA ++ +H+L HR+++ +I L +++DF + T +
Sbjct: 169 AEIVMA--IDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 641 GSA---AMELLETSAVDLESNVY-------SFGTILFEMITGR 673
G+ + E+L+ + Y + G +EM G+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 32/187 (17%)
Query: 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617
+ + G L HL Q + MR A + LEHMH + +R+L+ ++I
Sbjct: 269 FILDLMNGGDLHYHLS-QHGVFSEADMRFYAAE-IILGLEHMHNRF--VVYRDLKPANIL 324
Query: 618 LTEDYAAKISDF----SFWNNTTAAKTGSA---AMELLE-----TSAVDLESNVYSFGTI 665
L E +ISD F A G+ A E+L+ S+ D +S G +
Sbjct: 325 LDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW----FSLGCM 380
Query: 666 LFEMITGRISYSIENGSLENWASEY-LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCV 724
LF+++ G + ++ L L D P L+S LE LL
Sbjct: 381 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL----LEGLL------- 429
Query: 725 HPDPKQR 731
D +R
Sbjct: 430 QRDVNRR 436
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 189 LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247
L +L+ + L + TI KE L L ILDLG + P F F L L
Sbjct: 44 FPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103
Query: 248 LDNNQ 252
L
Sbjct: 104 LYFCG 108
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
L +LK + L N + L L++L+L +N + S+F + + L N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 252 Q 252
Sbjct: 349 H 349
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 4e-04
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Query: 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNN 228
+ +LNL + + L L+ + L N G + L ++ +DL N+
Sbjct: 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-GELYSSNFYGLPKVAYIDLQKNH 349
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQ 252
+ F L TL L +N
Sbjct: 350 IAIIQDQTFKFLEKLQTLDLRDNA 373
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 8e-05
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 9/96 (9%)
Query: 176 LRDLCLGGMLAPELGQLSELKSIILRNN---SFFGTIPKEIGELKELEILDLGFNNFSG- 231
L + L L P + L+ + LRN + G +L+ LDL N+
Sbjct: 186 LGERGLISALCP--LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243
Query: 232 PFPSDFGNSFSLTTLLLDNNQ---YLGGISPELHVL 264
L +L L G+ +L VL
Sbjct: 244 AGAPSCDWPSQLNSLNLSFTGLKQVPKGLPAKLSVL 279
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 8/103 (7%)
Query: 158 PCSWFGVECSDGKVVILNLRDLCLGGMLA--PELGQLSE--LKSIILRNNSFFGTIPKEI 213
+E + + ILNLR++ A EL Q + LK + + +++
Sbjct: 110 TAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQV 169
Query: 214 GELKELEILDLGFNNFSGPFPSD----FGNSFSLTTLLLDNNQ 252
L LDL N G +L L L N
Sbjct: 170 RVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 9e-05
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNN 228
NL L + + LS L+ + + NSF +I EL+ L LDL
Sbjct: 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQ 252
P+ F + SL L + +N
Sbjct: 187 LEQLSPTAFNSLSSLQVLNMSHNN 210
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNF 229
+L+ L L ++ L +L+ + ++++ + L+ L LD+ +
Sbjct: 79 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPEL 261
F F SL L + N + P++
Sbjct: 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 170
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 35/146 (23%), Positives = 53/146 (36%), Gaps = 17/146 (11%)
Query: 107 VMLLFLQNLSLARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVEC 166
+ML N SL++ ++ D F A KW G+N N EC
Sbjct: 3 IMLPINNNFSLSQNSFYNTISGTY------ADYFSAWDKWEKQALPGENRNEAVSLLKEC 56
Query: 167 SDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226
+ L L L L L L ++ + + N+ ++P+ L+ LD
Sbjct: 57 LINQFSELQLNRLNLSS-LPDNLPP--QITVLEITQNAL-ISLPELPASLEY---LDACD 109
Query: 227 NNFSGPFPSDFGNSFSLTTLLLDNNQ 252
N S P + L L +DNNQ
Sbjct: 110 NRLST-LPELPAS---LKHLDVDNNQ 131
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 18/153 (11%), Positives = 39/153 (25%), Gaps = 17/153 (11%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSII----LRNNSFFGTIPKEIGELKELEILDLGF 226
+L L + L + + R N IP+ I L + L
Sbjct: 181 SLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENRI-THIPENILSLDPTCTIILED 239
Query: 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASC 286
N S + + + + + +++ W
Sbjct: 240 NPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTA--WFPENKQSDV- 296
Query: 287 NSGLFTWNKVQ--PGDNAFRRMLQQVTNGFEAK 317
W+ + N F L ++++ A+
Sbjct: 297 ---SQIWHAFEHEEHANTFSAFLDRLSDTVSAR 326
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 159 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 218
++ V +L+L L + L QL + + L +N +P + L+
Sbjct: 431 LENSVLKMEYADVRVLHLAHKDLTVL--CHLEQLLLVTHLDLSHNRLR-ALPPALAALRC 487
Query: 219 LEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252
LE+L N N L LLL NN+
Sbjct: 488 LEVLQASDNALE--NVDGVANLPRLQELLLCNNR 519
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 3e-04
Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
+ L L L P L L L+ + +N+ + + L L+ L L N
Sbjct: 464 LVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQ 521
Query: 231 G-PFPSDFGNSFSLTTLLLDNNQ 252
+ L L L N
Sbjct: 522 QSAAIQPLVSCPRLVLLNLQGNS 544
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 2/80 (2%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKE-IGELKELEILDLGFNNFSGP 232
L + + P L S+ + + + +P + L L L+L +N S
Sbjct: 205 LEISHWPYLDTMTPNCLYGLNLTSLSITHCNL-TAVPYLAVRHLVYLRFLNLSYNPISTI 263
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
S L + L Q
Sbjct: 264 EGSMLHELLRLQEIQLVGGQ 283
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 533 LSKVNHKNF-VNLIGYCEEDEPFTRM-MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA- 589
L + F V L Y + E T++ ++ +Y G LF HL +E ++ +
Sbjct: 112 LEHIRQSPFLVTLH-YAFQTE--TKLHLILDYINGGELFTHLSQRERFTEHEV-QIYVGE 167
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----SFWNNTTAAKT--GS 642
+ +A LEH+H+L I +R+++ +I L + ++DF + T A G+
Sbjct: 168 IVLA--LEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
Query: 643 A---AMELLE------TSAVDLESNVYSFGTILFEMITGR 673
A +++ AVD +S G +++E++TG
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDW----WSLGVLMYELLTGA 259
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 37/170 (21%)
Query: 527 RKKIDT------LSKVNHKNFVNLIGYC--EEDEPFTRMMVFEYSPNGSLFEHLHIQEAE 578
R ++ T L +VNH V L Y E + + ++ ++ G LF L +
Sbjct: 68 RDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLY---LILDFLRGGDLFTRLSKEVMF 123
Query: 579 HLDWAMRLRIA-MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----SFW 632
+ + +A + +A L+H+H L I +R+L+ +I L E+ K++DF S
Sbjct: 124 TEEDV-KFYLAELALA--LDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
Query: 633 NNTTAAKT--GSA---AMELLE----TSAVDLESNVYSFGTILFEMITGR 673
+ A + G+ A E++ T + D +SFG ++FEM+TG
Sbjct: 179 HEKKA-YSFCGTVEYMAPEVVNRRGHTQSADW----WSFGVLMFEMLTGT 223
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGP 232
+++ E L+ K + +N++ +P + +++E+L+L
Sbjct: 32 VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTM-RKLPAALLDSFRQVELLNLNDLQIEEI 90
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
F + ++ L + N
Sbjct: 91 DTYAFAYAHTIQKLYMGFNA 110
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L L + L + LK + L +N + + + LE L L N+
Sbjct: 279 RLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIV 337
Query: 231 GPFPSDFGNSFSLTTLLLDNNQ 252
+L L L +N
Sbjct: 338 ---TLKLSTHHTLKNLTLSHND 356
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 60/301 (19%), Positives = 108/301 (35%), Gaps = 69/301 (22%)
Query: 465 PKLKRSELEAAC------EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSR 515
LK ++ + FS++ IG G+ G VY + + +A+ S +
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGH---GSFGAVYFARDVRNSEVVAIKKMSYSGK 92
Query: 516 ADWSKNLESQFRKKIDTLSKVNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLH- 573
S K++ L K+ H N + G Y E + M EY GS + L
Sbjct: 93 Q--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM---EYCL-GSASDLLEV 146
Query: 574 ----IQEAEHLDWAMRLRIAMGMAYC---LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626
+QE E IA L ++H + HR++++ +I L+E K+
Sbjct: 147 HKKPLQEVE---------IAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKL 195
Query: 627 SDFSFWNNTTAAKT--GSA---AMEL---LETSAVDLESNVYSFGTILFEMITGRISYSI 678
DF + A + G+ A E+ ++ D + +V+S G E+ +
Sbjct: 196 GDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255
Query: 679 ENGSLENWASEYLKGEQPLKDIVD------PTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
N + + P L+S + E + +C+ P+ RP
Sbjct: 256 MN---------------AMSALYHIAQNESPALQS--GHWSEYFRNFVDSCLQKIPQDRP 298
Query: 733 S 733
+
Sbjct: 299 T 299
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 28/157 (17%)
Query: 533 LSKVNHKNFVNLIGYC--EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAM 590
L H L Y D V EY+ G LF HL + D A R A
Sbjct: 202 LQNSRHPFLTALK-YSFQTHDRLC---FVMEYANGGELFFHLSRERVFSEDRA-RFYGAE 256
Query: 591 GMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----SFWNNTTAAKT--GSA 643
+ L+++H + +R+L+ ++ L +D KI+DF + T KT G+
Sbjct: 257 -IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-KTFCGTP 313
Query: 644 ---AMELLE----TSAVDLESNVYSFGTILFEMITGR 673
A E+LE AVD + G +++EM+ GR
Sbjct: 314 EYLAPEVLEDNDYGRAVDW----WGLGVVMYEMMCGR 346
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 4e-04
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 175 NLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS 230
L L + L + LK + L +N + + + LE L L N+
Sbjct: 273 RLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHL-LHVERNQPQFDRLENLYLDHNSIV 331
Query: 231 GPFPSDFGNSFSLTTLLLDNNQ 252
+L L L +N
Sbjct: 332 -TLK--LSTHHTLKNLTLSHND 350
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 175 NLRDLCLGG----MLAPE-LGQLSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNN 228
N + + L L +++ + L + I ++ L +GFN
Sbjct: 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI-EEIDTYAFAYAHTIQKLYMGFNA 104
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQ 252
P F N LT L+L+ N
Sbjct: 105 IRYLPPHVFQNVPLLTVLVLERND 128
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 64/294 (21%), Positives = 110/294 (37%), Gaps = 48/294 (16%)
Query: 462 TGVPKLKRSELEAACEDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS-RAD 517
TG + +A D N+ +GS GT G V+K +G IAV K R
Sbjct: 10 TGYLTIGGQRYQAEINDLENLGEMGS---GTCGQVWKMRFRKTGHVIAV-----KQMRRS 61
Query: 518 WSKNLESQFRKKIDTLSK-VNHKNFVNLIG-YCEEDEPFTRMMVFEYSPNGSLFEHLHIQ 575
+K + +D + K + V G + + F + E G+ E L +
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF---IAMELM--GTCAEKLKKR 116
Query: 576 EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF--SFWN 633
+ + ++ + + L ++ + I HR+++ S+I L E K+ DF S
Sbjct: 117 MQGPIPERILGKMTVAIVKALYYLKEKHGVI-HRDVKPSNILLDERGQIKLCDFGISGRL 175
Query: 634 NTTAAKTGSA------AMELLETSAV-----DLESNVYSFGTILFEMITGRISYSIENGS 682
AK SA A E ++ D+ ++V+S G L E+ TG+ Y
Sbjct: 176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
Query: 683 LENWASEYLKGEQPLKDIVD---PTLKSFQENVLEELLVVIKNCVHPDPKQRPS 733
E L ++ P L + +K+C+ D ++RP
Sbjct: 236 FEV-----------LTKVLQEEPPLLPG-HMGFSGDFQSFVKDCLTKDHRKRPK 277
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 31/158 (19%)
Query: 533 LSKVNHKNFVNLIGYC--EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA- 589
L H L Y D V EY+ G LF HL + + A R A
Sbjct: 59 LQNTRHPFLTALK-YAFQTHDRLC---FVMEYANGGELFFHLSRERVFTEERA-RFYGAE 113
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF-----SFWNNTTAAKT--GS 642
+ A LE++H + +R+++ ++ L +D KI+DF + T KT G+
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-KTFCGT 168
Query: 643 A---AMELLE----TSAVDLESNVYSFGTILFEMITGR 673
A E+LE AVD + G +++EM+ GR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDW----WGLGVVMYEMMCGR 202
|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 6e-04
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 320 ASEPSSSSSIASSPEP-LVSPSLSPSMSSLLSPSFSPSPSPSESPSVSSPLIIPPAPVNI 378
+ P+S S +SP SPS SP+ SPS+SP+ SPS SP+ S P+
Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPSYSPT-----SPSYSPT-SPSYSPTSPSYSPTSPSYSPT 1672
Query: 379 PIVSSPPHLHSAPTSFAASTPSQVHES 405
SP +PTS + S S +
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 7e-04
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 8/80 (10%)
Query: 175 NLRDLCLGGML--APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP 232
L L +L Q + L + +N + + L +L L+ N +
Sbjct: 65 GLTKLICTSNNITTLDLSQNTNLTYLACDSNKL-TNLD--VTPLTKLTYLNCDTNKLT-- 119
Query: 233 FPSDFGNSFSLTTLLLDNNQ 252
D + LT L N
Sbjct: 120 -KLDVSQNPLLTYLNCARNT 138
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 29/161 (18%)
Query: 531 DTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHL---HIQEAEHLDWAMRLR 587
D ++ N V L Y +D+ + MV EY P G L + + E WA R
Sbjct: 121 DIMAFANSPWVVQLF-YAFQDDRYL-YMVMEYMPGGDLVNLMSNYDVPE----KWA-RFY 173
Query: 588 IA-MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---WNNTTAAKTGSA 643
A + +A L+ +H + HR+++ ++ L + K++DF N + +A
Sbjct: 174 TAEVVLA--LDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 644 -------AMELLETSAVDLESNV----YSFGTILFEMITGR 673
+ E+L++ D +S G L+EM+ G
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-04
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 192 LSELKSIILRNNSFFGTIPKEI-GELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250
L +L+ + + + I L L IL L +N F F +L L L
Sbjct: 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQ 112
Query: 251 NQ 252
Sbjct: 113 CN 114
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 9e-04
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 175 NLRDLCLGGM-----LAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228
+L L LG + ++ L LK + L + +P + L LE L++ N+
Sbjct: 172 SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNH 229
Query: 229 FSGPFPSDFGNSFSLTTLLLDNNQ 252
F P F SL L + N+Q
Sbjct: 230 FPEIRPGSFHGLSSLKKLWVMNSQ 253
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 772 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.98 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.93 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.89 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.85 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.85 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.83 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.82 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.75 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.73 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.59 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.57 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.57 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.54 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.53 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.48 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.48 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.48 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.47 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.44 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.44 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.42 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.42 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.41 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.38 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.37 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.36 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.34 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.34 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.33 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.32 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.32 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.31 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.3 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.3 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.3 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.29 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.29 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.29 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.29 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.28 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.28 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.27 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.26 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.26 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.24 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.23 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.23 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.22 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.22 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.22 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.22 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.21 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.21 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.2 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.2 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.19 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.19 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.19 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.19 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.18 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.18 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.18 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.17 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.17 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.16 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.15 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.15 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.15 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.14 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.14 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.14 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.14 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.13 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.12 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.12 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.12 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.11 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.11 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.11 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.1 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.1 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.1 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.1 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.09 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.09 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.08 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.08 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.06 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.06 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.05 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.05 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.05 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.04 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.03 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.03 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.03 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.02 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.01 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.0 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 98.99 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 98.97 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 98.97 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 98.96 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 98.96 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 98.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 98.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 98.95 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 98.95 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 98.95 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 98.94 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 98.92 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 98.92 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 98.92 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.9 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.9 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 98.9 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 98.89 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 98.89 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 98.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 98.87 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 98.86 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 98.85 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 98.85 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 98.85 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 98.84 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.83 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 98.81 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 98.8 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 98.8 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 98.8 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 98.79 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 98.77 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 98.76 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 98.75 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 98.74 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 98.72 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.69 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 98.66 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.66 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 98.64 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.58 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.47 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 98.42 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.38 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.38 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.34 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.33 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.24 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.14 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.13 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.08 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.05 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.97 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.93 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 97.86 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.79 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.58 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.57 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.56 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.54 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.45 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.44 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.26 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.13 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 96.83 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 96.81 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.59 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.58 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.4 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.3 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 96.29 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.01 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.88 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.86 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.83 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 95.65 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.43 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.34 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 95.34 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 95.15 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 94.64 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 94.64 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 94.45 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 93.29 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 92.99 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 92.82 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 89.44 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 89.23 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 88.33 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 86.94 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 85.84 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 80.07 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=440.13 Aligned_cols=248 Identities=22% Similarity=0.370 Sum_probs=206.7
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+++|+|+||+||+|++. ++..||||++.... ....++|.+|+++|++++|||||+++|+|.+++
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 88 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-- 88 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--
Confidence 46678999999999999864 46789999986432 334578999999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhh-----------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQ-----------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~-----------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~ 623 (772)
..+||||||++|+|.++|+.. ....++|.+++.|+.|||+||+|||+++ ||||||||+||||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 166 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCCCc
Confidence 579999999999999999743 2356999999999999999999999988 999999999999999999
Q ss_pred EEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHh
Q 004124 624 AKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYL 691 (772)
Q Consensus 624 ~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~ 691 (772)
+||+|||+++... .++..|+|||.+.+..|+.++|||||||+||||+| |+.||.. .+..+....+.
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~i~ 244 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ--LSNNEVIECIT 244 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--CCHHHHHHHHH
Confidence 9999999986321 24557999999999999999999999999999999 8999964 33445555555
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.+..+ ..+..+++++.+||.+||+.||++||||+||++.|+++.+..+
T Consensus 245 ~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 44321 1233456789999999999999999999999999999887654
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=442.42 Aligned_cols=247 Identities=22% Similarity=0.373 Sum_probs=204.0
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.++||+|+||+||+|++. ++..||||++.... ....++|.+|+++|++++|||||+++|+|.+.+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 116 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-- 116 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 45578899999999999875 47889999986432 334578999999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhc-------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE-------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
..+||||||++|+|.++++... ...++|.+++.|+.|||+||+|||+.+ ||||||||+||||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQG 194 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETT
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCC
Confidence 5799999999999999997432 246999999999999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHH
Q 004124 622 YAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689 (772)
Q Consensus 622 ~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~ 689 (772)
+++||+|||+++.. ..++..|||||.+.+..|+.++|||||||+||||+| |+.||.. .+..+.+..
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~ 272 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDC 272 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--SCHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC--CCHHHHHHH
Confidence 99999999998743 124567999999999999999999999999999999 8999963 334444444
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+..+... ..++.+++++.+||.+||+.||++||||.||++.|+.+.+..
T Consensus 273 i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 273 ITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 4444221 122345678899999999999999999999999999987753
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=441.80 Aligned_cols=245 Identities=20% Similarity=0.373 Sum_probs=203.4
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++||+|+||+||+|++. +++.||||++..... ....++|.+|+.+|++++|||||+++|+|.+++
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-- 102 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-- 102 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC--
Confidence 56778999999999999873 467899999864432 223468999999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
..+||||||++|+|.++|+... ...++|..+++|+.|||+||+|||+.+ ||||||||+||||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD 180 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEECC
Confidence 4699999999999999996432 246999999999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004124 621 DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++++||+|||+++.. ..++..|+|||.+.++.|+.++|||||||+||||+| |+.||... +..+...
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~ 258 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVE 258 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHH
Confidence 999999999998642 124557999999999999999999999999999999 89999633 3444444
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.+..+.. .+.++.++.++.+||.+||+.||++||||.||++.|+.+.
T Consensus 259 ~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 259 MIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 4443321 1123456678999999999999999999999999998753
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-51 Score=436.39 Aligned_cols=250 Identities=25% Similarity=0.440 Sum_probs=203.0
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+++|+|+||+||+|+++. .||||+++.... .....++|.+|+++|++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 467789999999999998764 589998764332 234457899999999999999999999998754 358999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~----- 635 (772)
|||++|+|.++|+.. ...++|..++.|+.|||+||+|||+.+ ||||||||+||||++++++||+|||+++..
T Consensus 111 Ey~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999999643 456999999999999999999999988 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhcc---CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 ------TAAKTGSAAMELLET---SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~---~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|||||.+.+ ..|+.++|||||||+||||+||+.||...+ . ...+...+.... ..|.+.
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-~-~~~~~~~~~~~~-----~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-N-RDQIIFMVGRGY-----ASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-C-HHHHHHHHHTTC-----CCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-h-HHHHHHHHhcCC-----CCCCcc
Confidence 235678999999853 468999999999999999999999996432 2 222222222211 122233
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+.++++++.+||.+||+.||++||||.||++.|+.++...
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 344556778999999999999999999999999999887543
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=426.10 Aligned_cols=241 Identities=20% Similarity=0.375 Sum_probs=201.9
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.||+|+||+||+|+.. +|+.||||++...... ....+.|.+|+++|++++|||||++++++.+++ ..||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yi 100 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYI 100 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEE
Confidence 478899999999999999964 6899999998765432 334578999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||||++|+|.+++..+....+++.....|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+++...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999999997666667899999999999999999999998 9999999999999999999999999997543
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.|+..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+..+..+ ..+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~----------~~~ 246 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFP----------PVS 246 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCC----------CCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCCC----------CCC
Confidence 367789999999999999999999999999999999999963 3455666666555322 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++.++.+|+.+||+.||++|||+.|+++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 334567899999999999999999999986
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=413.85 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=197.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
.++..++|+|+||+||+|+.. +++.||+|++...... ....++|.+|+++|++++|||||++++++.+. +....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 104 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence 345567899999999999965 6789999998754322 33457899999999999999999999998652 22257
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~~~ 635 (772)
+||||||++|+|.++++. ...+++..+..|+.||+.||+|||+++++||||||||+||||+ +++.+||+|||+++..
T Consensus 105 ~lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999999963 4569999999999999999999999888899999999999998 4799999999998643
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..|+..|||||.+.+ .|+.++|||||||++|||+||+.||... .+.......+..+..+. .+
T Consensus 183 ~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-~~~~~~~~~i~~~~~~~---------~~ 251 (290)
T 3fpq_A 183 RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SF 251 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GG
T ss_pred CCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-CcHHHHHHHHHcCCCCC---------CC
Confidence 236779999998864 6999999999999999999999999633 23344444433332211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...++++.+|+.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2233457889999999999999999999975
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=420.53 Aligned_cols=249 Identities=16% Similarity=0.158 Sum_probs=205.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
.++.+++|+|+||+||+|+.. +|+.||||++..... +.+|+++|++++|||||++++++.+++ ..||
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~i 127 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGP--WVNI 127 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 366778999999999999964 689999999864321 247999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNT-- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~-- 635 (772)
|||||++|+|.++++. ...+++..+..|+.||+.||+|||+++ ||||||||+||||+.++ .+||+|||+++..
T Consensus 128 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp EECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred EEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999999964 356999999999999999999999998 99999999999999987 6999999998632
Q ss_pred ------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 ------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
..|+..|||||++.+..|+.++|||||||++|||+||+.||...... +....+..+..+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~~~------ 275 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--PLCLKIASEPPPI------ 275 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--CCHHHHHHSCCGG------
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHcCCCCc------
Confidence 23677899999999999999999999999999999999999754322 1222333332221
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
...++.+++++.+++.+||+.||++|||+.|+++.|.........-..|
T Consensus 276 --~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hP 324 (336)
T 4g3f_A 276 --REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSP 324 (336)
T ss_dssp --GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSC
T ss_pred --hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCC
Confidence 1233456678899999999999999999999999998876654443333
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-49 Score=427.12 Aligned_cols=250 Identities=21% Similarity=0.339 Sum_probs=202.9
Q ss_pred ccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC-CcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|++.. ++.||||++..... ....++|.+|+++|.+++| ||||+++|+|.+.+.
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~----~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 778899999999999998653 35789998764322 2345689999999999965 999999999976532
Q ss_pred ceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld 619 (772)
..+||||||++|+|.++|+... ...++|..++.|+.|||+||+|||+++ ||||||||+|||++
T Consensus 143 -~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS 219 (353)
T ss_dssp -CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEC
T ss_pred -EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCccceeeC
Confidence 4689999999999999997532 235899999999999999999999988 99999999999999
Q ss_pred CCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHH
Q 004124 620 EDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687 (772)
Q Consensus 620 ~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~ 687 (772)
+++.+||+|||+++.... ++..|||||.+.+..|+.++|||||||+||||+| |+.||...... ....
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~ 298 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC 298 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHH
Confidence 999999999999975422 2446999999999999999999999999999998 99999643322 2222
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..+..+ ..++.+++++.++|.+||+.||++||||.||++.|+++.+..
T Consensus 299 ~~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 299 RRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 223222211 122345578899999999999999999999999999987654
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=418.56 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=200.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++++||+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~i 148 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWV 148 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-----HHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 477889999999999999975 68999999987543322 346889999999999999999999999887 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 149 vmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred EEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999999999853 45899999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||++.+..|+.++||||+||++|||+||+.||... +..+....+..+..+. + ...
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~-------~-~~~ 293 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPR-------L-KNL 293 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCC-------C-SCG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCC-------C-Ccc
Confidence 23677899999999999999999999999999999999999643 3344444443332111 1 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+++++.+|+.+||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 345578899999999999999999999876
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=415.15 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=194.9
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC--ceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~~L 558 (772)
.+.+++|+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...+|
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4556789999999999998 48899999885432 112234456777788999999999999986542 24699
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
|||||++|+|.++++. ..++|..+.+|+.|+++||+|||+. .++||||||||+|||||+++++||+|||++
T Consensus 79 V~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999999963 4589999999999999999999976 346999999999999999999999999997
Q ss_pred cCC-------------CCCCccccchhhhccC------CCCCCCchHHHHHHHHHHHcCCCcccCCC-------------
Q 004124 633 NNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITGRISYSIEN------------- 680 (772)
Q Consensus 633 ~~~-------------~~~~~~~~aPE~~~~~------~~s~ksDVwSfGvvL~ELltG~~P~~~~~------------- 680 (772)
+.. ..++..|+|||.+.+. .|+.++|||||||+||||+||+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 532 1356789999998654 46789999999999999999987764211
Q ss_pred CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
............. ..+|.++. ...+.++.+.+||.+||+.||++||||.||++.|+++.+.
T Consensus 236 ~~~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 236 PSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1222222222211 12233322 1235677899999999999999999999999999998764
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=412.70 Aligned_cols=258 Identities=19% Similarity=0.283 Sum_probs=213.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++.+..... ....+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 37888999999999999996 468999999987543221 223467999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ...+++.....|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++..
T Consensus 110 vmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999999963 356999999999999999999999998 999999999999999999999999998632
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..|+..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+..+...+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~---------- 253 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDF---------- 253 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC----------
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCC----------
Confidence 2367789999999999999999999999999999999999964 34555566666553322
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
++..++++.+|+.+||+.||++|||++|+... ..++ .+|.+...+|+.++
T Consensus 254 -p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~-~~i~------~Hp~F~~idw~~l~ 303 (311)
T 4aw0_A 254 -PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY-GPLK------AHPFFESVTWENLH 303 (311)
T ss_dssp -CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH-HHHH------TSGGGTTCCCTTGG
T ss_pred -CcccCHHHHHHHHHHccCCHhHCcChHHHcCC-HHHH------CCCCcCCCCHHHhc
Confidence 22345678899999999999999999987432 1111 25667777787765
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=397.35 Aligned_cols=238 Identities=22% Similarity=0.340 Sum_probs=192.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||+|++......+ ....+.+.+|+++|++++|||||++++++.+.+ ..|+
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~i 90 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIM 90 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEE
Confidence 47889999999999999995 468999999987543322 223467999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+ +|+|.+++.. ...+++.....++.||+.||+|||+++ |+||||||+|||+++++++||+|||+++..
T Consensus 91 vmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99999 6899999853 456999999999999999999999998 999999999999999999999999998643
Q ss_pred -----CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 -----TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..| +.++||||+||++|||+||+.||.. .+..+....+..+...+.
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~~~~~~~p----------- 232 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYTLP----------- 232 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC-----------
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC-----------
Confidence 246778999999988876 5799999999999999999999964 345555555555433221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++++.+|+.+||+.||++|||++|+++
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234467889999999999999999999986
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=406.72 Aligned_cols=255 Identities=19% Similarity=0.258 Sum_probs=204.5
Q ss_pred cccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++........ ...++.+|+++|++++|||||++++++.+++ .
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~ 100 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHPFIVKLHYAFQTEG--K 100 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE---ECC------CCCCCCCCTTEECEEEEEEETT--E
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH---HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--E
Confidence 378899999999999999863 467899999865432221 1236889999999999999999999999877 7
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.|+|||||++|+|.+++.. ...+++.....++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+++..
T Consensus 101 ~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 8999999999999999963 456999999999999999999999998 999999999999999999999999998632
Q ss_pred ---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 ---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||.. .+..+....+..+....
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~--------- 245 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKLGM--------- 245 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC---------
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC--cCHHHHHHHHHcCCCCC---------
Confidence 2467789999999999999999999999999999999999963 34555555555543322
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhhhc
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSM-----RGIAAKLKEITAMEPDGATPKLSPLWWAELEILSS 769 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~-----~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~~~ 769 (772)
+..+++++.+|+.+||+.||++|||+ +|+++ +|.+...+|+.++..+.
T Consensus 246 --p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~-------------Hp~f~~idw~~l~~~~~ 298 (304)
T 3ubd_A 246 --PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR-------------HSFFSTIDWNKLYRREI 298 (304)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT-------------SGGGTTCCHHHHHTTCS
T ss_pred --CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc-------------CccccCCCHHHHHhCCC
Confidence 22345678899999999999999985 45442 45666777887765443
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=419.05 Aligned_cols=239 Identities=20% Similarity=0.281 Sum_probs=200.5
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++++||+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..|
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ 224 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELW 224 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-----HHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEE
Confidence 4578899999999999999965 68999999987654322 346889999999999999999999999887 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
||||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 225 iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999999853 45899999999999999999999998 999999999999999999999999998642
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..|+..|||||++.+..|+.++|||||||++|||++|+.||... +..+....+.....+.. ..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~--------~~ 369 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRL--------KN 369 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCC--------SC
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCC--------cc
Confidence 23567899999999999999999999999999999999999643 33444444433321111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++.++.+|+.+||+.||++|||+.|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1234567899999999999999999999876
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=397.85 Aligned_cols=242 Identities=18% Similarity=0.311 Sum_probs=188.5
Q ss_pred hcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC--
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP-- 553 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~-- 553 (772)
+|| ++++.+|+|+||+||+|+.. +++.||||++..... ....+++.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy-~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 5 TDF-EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp HHE-EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred hhC-EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 344 77889999999999999964 688999999875432 2345679999999999999999999999875432
Q ss_pred --------ceEEEEEeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcE
Q 004124 554 --------FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 624 (772)
Q Consensus 554 --------~~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~ 624 (772)
...|+|||||++|+|.+++.... ....++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+
T Consensus 80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCE
T ss_pred cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcE
Confidence 13689999999999999996442 234677788899999999999999998 9999999999999999999
Q ss_pred EEccccCccCCC---------------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH
Q 004124 625 KISDFSFWNNTT---------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 683 (772)
Q Consensus 625 kLsDFGla~~~~---------------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~ 683 (772)
||+|||+++... .|+..|||||.+.+..|+.++|||||||++|||++ ||.... +.
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~ 233 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ER 233 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HH
Confidence 999999986432 36778999999999999999999999999999997 774221 11
Q ss_pred HHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......... ..+.......++..+|+.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~----------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTDVRNL----------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHTT----------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhcC----------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111111111 111222344556788999999999999999999876
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=385.33 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=195.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC----Cc
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~----~~ 554 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... ....+.+.+|+++|++++|||||++++++.... ..
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV---VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc---hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 47889999999999999996 47899999998644321 233567899999999999999999999986432 12
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..|||||||+ |+|.+++. ..+.+++..+..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeee
Confidence 5799999995 78999985 3467999999999999999999999998 99999999999999999999999999864
Q ss_pred C-------------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcc
Q 004124 635 T-------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKD 699 (772)
Q Consensus 635 ~-------------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~ 699 (772)
. ..++..|+|||++.+. .|+.++||||+||++|||+||+.||...+ ..+....+.... .+...
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChH
Confidence 2 2467789999998765 56999999999999999999999996433 223332222211 11111
Q ss_pred ccC---------------C----ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 IVD---------------P----TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ~~d---------------~----~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
... + .+....+..+.++.+|+.+||+.||++|||+.|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 0 0001112335678999999999999999999999863
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=378.17 Aligned_cols=245 Identities=19% Similarity=0.327 Sum_probs=190.5
Q ss_pred cccccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+.+++++.+|+|+||+||+|+.+ .++.||+|++..... ..++.+|+++|.++ +|||||++++++.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-------PIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-------HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-------HHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 44588999999999999999853 467899998754321 24688999999998 6999999999999877
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccC
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 631 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGl 631 (772)
+.++|||||++|+|.+++. .+++.....++.|++.||+|||+++ ||||||||+|||++.+ +.+||+|||+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred --EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 7899999999999999983 4899999999999999999999998 9999999999999877 8999999999
Q ss_pred ccCC-------------------------------------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCC
Q 004124 632 WNNT-------------------------------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGR 673 (772)
Q Consensus 632 a~~~-------------------------------------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~ 673 (772)
|+.. ..++..|+|||++.+. .|+.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 8532 1367789999998765 5899999999999999999999
Q ss_pred CcccCCCCCHHHHHHHHhh--c-------------------CCCCcc---c------cC---Ccc----------ccccH
Q 004124 674 ISYSIENGSLENWASEYLK--G-------------------EQPLKD---I------VD---PTL----------KSFQE 710 (772)
Q Consensus 674 ~P~~~~~~~~~~~~~~~~~--~-------------------~~~~~~---~------~d---~~l----------~~~~~ 710 (772)
.||.....+.... ..+.. + ..+..+ . .+ +.. .....
T Consensus 245 ~Pf~~~~~~~~~l-~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 245 YPFYKASDDLTAL-AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp SSSSCCSSHHHHH-HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCHHHHH-HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 9996544332221 11100 0 000000 0 00 000 00012
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++++.+|+.+||+.||++|||++|+++
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 23467899999999999999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=396.23 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=195.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.||+|+||+||+|+.. +|+.||+|++.+...... ..........++++++.++|||||++++++.+.+ ..||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lyl 269 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSF 269 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEE
Confidence 78889999999999999965 689999999875432211 1111223344577788889999999999999887 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.++|.. ...+++..+..|+.||+.||+|||+++ ||||||||+|||||.+|.+||+|||+++..
T Consensus 270 VmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999963 456999999999999999999999998 999999999999999999999999998632
Q ss_pred ----CCCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ----TAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..|+..|+|||++. +..|+.++||||+||++|||+||+.||...+. +..+........... ++
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~-----------~p 414 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-----------LP 414 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC-----------CC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC-----------CC
Confidence 35778999999996 45799999999999999999999999975433 333333444433222 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...+.++.+|+.+||+.||++|++ +.||.+
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 334577899999999999999998 677754
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=366.46 Aligned_cols=267 Identities=31% Similarity=0.528 Sum_probs=218.2
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+++..+++| ++.+.+|+|+||+||+|+..+++.||||++..... ...+.|.+|++++++++||||+++++++..
T Consensus 33 ~~~~~~~~y-~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 33 DLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-----QGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CCCCCCCCC-SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-----SHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred HHHHHHhcc-CccceeecCCCeeEEEEEECCCCEEEEEEecccCh-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 333444555 66788999999999999988899999998765432 234679999999999999999999999987
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
.+ ..++||||+++|+|.+++.... ...++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 107 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 107 RN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp TT--CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECC
T ss_pred CC--eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEee
Confidence 76 5699999999999999986432 235899999999999999999999988 99999999999999999999999
Q ss_pred ccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC----CCHHHHHHHHhhc
Q 004124 629 FSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN----GSLENWASEYLKG 693 (772)
Q Consensus 629 FGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~----~~~~~~~~~~~~~ 693 (772)
||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... .....|.......
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 99875321 13457999999988999999999999999999999999996432 2344444333222
Q ss_pred CCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 694 EQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 694 ~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+...+++... ......+.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 263 -GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp -TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 334455555443 355778899999999999999999999999999999987654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=391.10 Aligned_cols=241 Identities=22% Similarity=0.303 Sum_probs=201.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.||+|+||+||+|+.+ +|+.||+|++..... ...+.+.+|+++|++++|||||++++++.+.+ ..+|
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~i 231 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-----SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVM 231 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-----hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEE
Confidence 478899999999999999964 689999999865432 23467889999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC--CcEEEccccCccCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED--YAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~--~~~kLsDFGla~~~~ 636 (772)
|||||++|+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 232 v~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999853 3356899999999999999999999998 9999999999999854 899999999987543
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||++.+..|+.++||||+||++|||++|+.||... +..+....+......... ..
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 379 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDD-------SA 379 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCS-------GG
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHhCCCCCCc-------cc
Confidence 3567899999999999999999999999999999999999643 344445555444322211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+++++.+||.+||+.||++|||+.|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1234567889999999999999999999986
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=355.15 Aligned_cols=276 Identities=29% Similarity=0.517 Sum_probs=225.9
Q ss_pred CCCCCHHHHHHHhhccccc-----ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC
Q 004124 464 VPKLKRSELEAACEDFSNI-----IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538 (772)
Q Consensus 464 ~~~~~~~el~~~~~~f~~i-----ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H 538 (772)
...++..++..++++|... ...+|+|+||+||+|+. ++..+|||++....... .....+.|.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT-TEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSC-TTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcc-hHHHHHHHHHHHHHHHhcCC
Confidence 4568899999999998622 26789999999999987 57889999886532211 23345789999999999999
Q ss_pred CcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 539 pNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
|||+++++++.+.+ ..++||||+++|+|.+++... ....++|..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEE
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEE
Confidence 99999999998876 569999999999999998643 2456999999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC--CCHH
Q 004124 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLE 684 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~ 684 (772)
+++++.+||+|||+++... .++..|+|||.+.+ .++.++|||||||++|||+||+.||.... ....
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 9999999999999875322 34567999998764 58899999999999999999999997432 2233
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+..........+.+.+++.+.......++++.+++.+||+.||++||++.||++.|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 44444444444445556666666677888999999999999999999999999999998864
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=363.46 Aligned_cols=273 Identities=29% Similarity=0.555 Sum_probs=221.4
Q ss_pred CCCCCHHHHHHHhhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccc
Q 004124 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 464 ~~~~~~~el~~~~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
...++..++....++| ++.+.+|+|+||+||+|+..+++.||||++....... ....|.+|++++++++||||++
T Consensus 17 ~~~~~~~~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 17 LKRFSLRELQVASDNF-SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CEECCTHHHHTTTTSS-CSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred cceecHHHHHHHhhcc-ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch----HHHHHHHHHHHHHhccCCCccc
Confidence 4567888888877776 6778899999999999998889999999986543221 1236899999999999999999
Q ss_pred eeEEEEcCCCceEEEEEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECC
Q 004124 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~ 620 (772)
+++++...+ ..++||||+++|+|.+++.... ...++|..+..|+.|++.||+|||+. .++|+||||||+|||++.
T Consensus 92 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 92 LRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred eEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 999998876 5699999999999999997542 34599999999999999999999997 123999999999999999
Q ss_pred CCcEEEccccCccCCC----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccC------CCCCHH
Q 004124 621 DYAAKISDFSFWNNTT----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENGSLE 684 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~------~~~~~~ 684 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.. ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999986322 246679999999888899999999999999999999999951 223344
Q ss_pred HHHHHHhhcCCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 685 NWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.|+...... .......+.... ........++.+++.+||+.||++|||+.||++.|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 554433332 233444444433 45677889999999999999999999999999999874
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=357.54 Aligned_cols=251 Identities=26% Similarity=0.407 Sum_probs=201.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+. .+..||||++..... .....++|.+|++++++++|||||++++++...+ ..++||
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF---HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVT 113 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEE
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEE
Confidence 6788999999999999987 578899998865432 2334567999999999999999999999998876 569999
Q ss_pred eccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 561 EYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999999986432 23489999999999999999999998888999999999999999999999999987532
Q ss_pred -----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 636 -----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+............ ..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~~---------~~~~ 262 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKRL---------EIPR 262 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCCC---------CCCT
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCC---------CCCc
Confidence 23466899999999999999999999999999999999999643 2333333222111110 1223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.++.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999999999987643
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=363.27 Aligned_cols=249 Identities=23% Similarity=0.402 Sum_probs=202.9
Q ss_pred ccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
++.+.+|+|+||+||+|+.. ++..||||++.... .....+++.+|+++++++ +|||||++++++...
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC----BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc----CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 67788999999999999863 34579999886432 233456799999999999 899999999999887
Q ss_pred CCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 160 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIl 235 (370)
T 2psq_A 160 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVL 235 (370)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEE
T ss_pred C--CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhEE
Confidence 6 5699999999999999997532 235899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEE 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGG
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHH
Confidence 9999999999999986322 12346999999999999999999999999999999 999996432 233
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.......+... ..+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 314 ~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 314 LFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHHHHTTCCC----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 33332222111 1223445678999999999999999999999999999876543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-41 Score=358.69 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=201.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||+||+|+.. +++.+|+|++.... ....+.|.+|++++++++||||+++++++.+++ ..++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 85 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFI 85 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEE
Confidence 56788999999999999975 58889999874322 334578999999999999999999999999877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 86 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999964 3456999999999999999999999998 999999999999999999999999987532
Q ss_pred -------------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH---HHHHHHhhc
Q 004124 636 -------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE---NWASEYLKG 693 (772)
Q Consensus 636 -------------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~---~~~~~~~~~ 693 (772)
..++..|+|||.+.+..++.++|||||||++|||++|..|+........ .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 2355679999999999999999999999999999999998853221100 000000000
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..++.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 243 -------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 243 -------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 012233457889999999999999999999999999987653
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=354.23 Aligned_cols=250 Identities=21% Similarity=0.328 Sum_probs=198.3
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC--ceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~~L 558 (772)
++++.+|+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++..... ...++
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 67889999999999999876 7899999885432 223456779999999999999999999987542 24699
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC----------CCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------TPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~----------~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
||||+++|+|.++++. ..++|..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999953 3589999999999999999999998 6 99999999999999999999999
Q ss_pred ccCccCC-----------CCCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCC-----------
Q 004124 629 FSFWNNT-----------TAAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENG----------- 681 (772)
Q Consensus 629 FGla~~~-----------~~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~----------- 681 (772)
||+++.. ..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9998421 234667999999876 3456788999999999999999999964321
Q ss_pred ---CHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 682 ---SLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 682 ---~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
....+........ ..+.+.. .....+.++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKK------KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhccc------CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 2222222221111 1111111 12356678999999999999999999999999999987653
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=361.17 Aligned_cols=270 Identities=24% Similarity=0.372 Sum_probs=207.8
Q ss_pred ccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
.+.+.+|+|+||+||+|+.. .+..||||++.... .....+++.+|+++++++ +|||||++++++...
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc----CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 67788999999999999863 23579999886432 233456799999999999 999999999999887
Q ss_pred CCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||
T Consensus 148 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIl 223 (382)
T 3tt0_A 148 G--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVL 223 (382)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEE
T ss_pred C--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceEE
Confidence 7 5699999999999999997543 235899999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
+++++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~~ 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEE 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHH
Confidence 99999999999999864321 2346899999999999999999999999999999 99999533 3444
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
.......+... ..+..++.++.+++.+||+.||++|||+.||++.|+++.............+.++.+.+
T Consensus 302 ~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T 3tt0_A 302 LFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDYD 371 (382)
T ss_dssp HHHHHHTTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC-------------
T ss_pred HHHHHHcCCCC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccCC
Confidence 44433333211 01123456788999999999999999999999999999998888777777777777776
Q ss_pred hhhcc
Q 004124 766 ILSSE 770 (772)
Q Consensus 766 ~~~~~ 770 (772)
+.+.+
T Consensus 372 ~~~~~ 376 (382)
T 3tt0_A 372 IPTTE 376 (382)
T ss_dssp -----
T ss_pred CCCCC
Confidence 65543
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=342.94 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=204.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. +..+|||++...... ....+.|.+|++++++++||||+++++++.+.+....++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS---TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC---HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC---HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 67788999999999999986 888999998754322 33456799999999999999999999999876433679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----C
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----T 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~----~ 636 (772)
||+++|+|.+++.......+++..+..|+.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+.... .
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 168 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR 168 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCc
Confidence 999999999999755445699999999999999999999998888999999999999999999999988875432 3
Q ss_pred CCCccccchhhhccCCCCC---CCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 AAKTGSAAMELLETSAVDL---ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ~~~~~~~aPE~~~~~~~s~---ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++. ++|||||||++|||+||+.||... ...+............ ..+...+
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~ 237 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVALEGLRP---------TIPPGIS 237 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--CHHHHHHHHHHSCCCC---------CCCTTCC
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--ChHHHHHHHHhcCCCC---------CCCCCCC
Confidence 3466899999987665554 799999999999999999999633 2333333333221110 1123345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 678999999999999999999999999998754
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=365.10 Aligned_cols=246 Identities=26% Similarity=0.378 Sum_probs=202.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|++. +++.||||.+.... .....++|.+|+++|++++|||||+++|++...+ ..++|
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 190 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIV 190 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS----CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEE
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEE
Confidence 67788999999999999986 78899999876432 1234457899999999999999999999998776 46999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++|+|.++++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999999964 3345899999999999999999999998 99999999999999999999999999864321
Q ss_pred ---------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ---------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+..|+|||.+....++.++|||||||++|||+| |+.||.... ..+.......+.. . .
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~~-~---------~ 335 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEKGGR-L---------P 335 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHTTCC-C---------C
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC-C---------C
Confidence 1235999999998899999999999999999999 999996432 2222222222211 1 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+..+++++.++|.+||+.||++|||+.++++.|+++.+.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1233456788999999999999999999999999998764
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=339.86 Aligned_cols=244 Identities=20% Similarity=0.354 Sum_probs=203.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVF 84 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEecccccC------HHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEE
Confidence 678889999999999999988999999998644321 357999999999999999999999998876 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999999853 3456899999999999999999999998 9999999999999999999999999886332
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+....++.++||||+|+++|||+| |+.||.. ....+.......+.... .+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~--~~~~~~~~~~~~~~~~~----------~~ 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSEVVEDISTGFRLY----------KP 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC--CCHHHHHHHHhcCccCC----------CC
Confidence 22346999999999999999999999999999999 9999953 33334444433331111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22346788999999999999999999999999998763
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=352.74 Aligned_cols=249 Identities=21% Similarity=0.320 Sum_probs=203.8
Q ss_pred ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+.. .+..||||++.... .....+.|.+|++++++++|||||++++++.+.+ ..
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 67788999999999999974 34569999886432 2334578999999999999999999999998776 56
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.++++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999999853 3356999999999999999999999998 9999999999999999999999999986432
Q ss_pred C------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+...
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~------- 273 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRL------- 273 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCC-------
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCC-------
Confidence 1 1235999999998999999999999999999999 99999533 333333333332111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..+..++.++.+++.+||+.||++||++.||++.|+.+.+....
T Consensus 274 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 ---PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ---CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 11233456788999999999999999999999999998876543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=370.38 Aligned_cols=245 Identities=22% Similarity=0.362 Sum_probs=204.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|++.++..||||++..... ..+.|.+|+++|++++|||||++++++.. + ..++||
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~ 261 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM------SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 261 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCCc------cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEE
Confidence 67788999999999999998889999999864331 24679999999999999999999999874 3 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
|||++|+|.++++......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999997554456899999999999999999999998 99999999999999999999999999864321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... +..+.......+... ..+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~----------~~~ 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYRM----------PRP 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCCC----------CCC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------CCC
Confidence 2346999999998999999999999999999999 99999632 333433333333111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+++++.++|.+||+.||++||||.+|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 345578899999999999999999999999999986643
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=347.50 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=205.8
Q ss_pred CCCCHHHHHHHhhcc---------cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHh
Q 004124 465 PKLKRSELEAACEDF---------SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534 (772)
Q Consensus 465 ~~~~~~el~~~~~~f---------~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~ 534 (772)
+.++.++++.+++.. .+....+|+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 457788888887652 345567899999999999976 7899999998654322 2457889999999
Q ss_pred cCCCCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004124 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 535 ~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
+++|||||++++++...+ ..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~ 170 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSD 170 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHH
Confidence 999999999999998877 6799999999999999885 346899999999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCC---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004124 615 SIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 615 NILld~~~~~kLsDFGla~~~~---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
|||++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~ 248 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQ 248 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHH
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHH
Confidence 9999999999999999875322 3456799999999999999999999999999999999999643 2333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..........+. .. .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~-------~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 249 AMKRLRDSPPPK-------LK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHSSCCC-------CT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcCCCCC-------cC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 333333322111 10 112345678899999999999999999999863
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=349.82 Aligned_cols=239 Identities=21% Similarity=0.340 Sum_probs=200.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+. .+++.||||++...... ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 91 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYL 91 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEE
Confidence 37788999999999999997 57899999998654322 334567899999999999999999999998876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999999864 356899999999999999999999998 999999999999999999999999998633
Q ss_pred -----CCCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 -----TAAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++ .++||||+||++|||+||+.||.. .+..+.......+.....
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~~p----------- 234 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKELRERVLRGKYRIP----------- 234 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC-----------
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC-----------
Confidence 2356679999999888775 789999999999999999999963 345555555555433221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2234678899999999999999999999864
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=338.10 Aligned_cols=246 Identities=19% Similarity=0.370 Sum_probs=202.5
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 81 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIV 81 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC------HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEE
Confidence 3678899999999999999998889999998654322 356899999999999999999999998776 57999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp EECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred EEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999998643 345899999999999999999999988 99999999999999999999999998763321
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~----------~ 226 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRLY----------R 226 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------C
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCCC----------C
Confidence 2235999999998899999999999999999999 99999533 2333333333322111 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+...++++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1223457889999999999999999999999999987643
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=350.42 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=199.6
Q ss_pred cccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||+||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 47889999999999999985 367899999886432 23346799999999999999999999999764322
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 469999999999999999643 345899999999999999999999988 99999999999999999999999999864
Q ss_pred CCC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH-------------HHHH
Q 004124 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN-------------WASE 689 (772)
Q Consensus 635 ~~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~-------------~~~~ 689 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||..|+......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 321 223489999999999999999999999999999999987522110000 0111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..... .....+..+++++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 244 ~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 LLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhcc---------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11110 011123345678999999999999999999999999999987643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=368.87 Aligned_cols=244 Identities=24% Similarity=0.407 Sum_probs=203.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|++. ++.||||.++... ..+.|.+|+++|++++|||||++++++...+. ..++||
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~ 266 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 266 (450)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEE
T ss_pred EEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEE
Confidence 67788999999999999986 7799999886432 23579999999999999999999999876543 469999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
|||++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 344 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCccccccccc
Confidence 9999999999997655556899999999999999999999998 9999999999999999999999999986432
Q ss_pred --CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..+..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+....+..+.. ...+..++
T Consensus 345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~----------~~~p~~~~ 412 (450)
T 1k9a_A 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK----------MDAPDGCP 412 (450)
T ss_dssp --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHHHHHHTTCC----------CCCCTTCC
T ss_pred CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC----------CCCCCcCC
Confidence 23457999999999999999999999999999999 9999964332 222233322211 11223456
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.++.++|.+||+.||++|||+.++++.|+++...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 7889999999999999999999999999998764
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=348.97 Aligned_cols=239 Identities=20% Similarity=0.264 Sum_probs=198.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ......+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv 83 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFV 83 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEE
Confidence 67888999999999999975 68899999986532211 223457889999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999999853 356899999999999999999999998 9999999999999999999999999986421
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+.......+... ++.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~-----------~p~ 226 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIR-----------FPR 226 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CCT
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-----------CCC
Confidence 2456799999999999999999999999999999999999643 344444444443222 122
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
..+.++.+++.+||+.||++|| ++.|+++.
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 3456788999999999999999 89998763
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=345.13 Aligned_cols=238 Identities=21% Similarity=0.293 Sum_probs=196.3
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++...... ..+.+.+|+.++++++|||||++++++...+ ..++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 94 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWV 94 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEE
Confidence 36788899999999999985 57889999988654322 2356899999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999999853 35899999999999999999999998 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...+ .............+. . ..+
T Consensus 170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~--~------~~~ 239 (297)
T 3fxz_A 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPE--L------QNP 239 (297)
T ss_dssp TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHHCSCC--C------SCG
T ss_pred ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCCC--C------CCc
Confidence 235667999999999999999999999999999999999996432 222222222221110 0 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+..+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 345567889999999999999999999986
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=343.74 Aligned_cols=254 Identities=20% Similarity=0.342 Sum_probs=206.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. ++..||+|.+....... ....+.|.+|++++.+++||||+++++++...+ ..++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 88 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYL 88 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEE
Confidence 478889999999999999964 68899999886543322 344578999999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999999863 346899999999999999999999998 9999999999999999999999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............+ ......
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~------~~~~~~ 236 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--AVSIAIKHIQDSVP------NVTTDV 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--HHHHHHHHHSSCCC------CHHHHS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhhccCC------Ccchhc
Confidence 24667999999999999999999999999999999999996432 22322333322111 001112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhhhcCC
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 749 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 749 (772)
....++.+.+++.+||+.||++|| +++++.+.|+.+.....
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 234557789999999999999998 99999999998766544
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=337.68 Aligned_cols=244 Identities=18% Similarity=0.350 Sum_probs=200.0
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++||
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 98 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIIT 98 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC------HHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEE
Confidence 678899999999999999998889999998654322 356899999999999999999999998776 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 99 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 99 EYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred eccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999998642 356999999999999999999999998 9999999999999999999999999886332
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~----------~~ 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLY----------RP 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCC----------CC
Confidence 22346999999998999999999999999999999 99999643 2333333333321111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...++++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 22346788999999999999999999999999988654
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=341.71 Aligned_cols=251 Identities=27% Similarity=0.438 Sum_probs=201.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhh--hHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK--NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~--~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+++.+.+|+|+||+||+|+. .+++.||+|++.......... ...+.+.+|++++++++||||+++++++.+..
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 96 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP---- 96 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----
Confidence 36788899999999999997 478899999886543322111 01167999999999999999999999986643
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSF 631 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kLsDFGl 631 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+++|+||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 699999999999988853 345799999999999999999999998877999999999999988776 99999999
Q ss_pred ccCCC------CCCccccchhhh--ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 632 WNNTT------AAKTGSAAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~------~~~~~~~aPE~~--~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+ ....++.++|||||||++|||+||+.||.................... +
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------~ 249 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------P 249 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC------C
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC------C
Confidence 86432 345678999998 455678999999999999999999999976554444333333322111 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 12234457789999999999999999999999999864
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=366.81 Aligned_cols=246 Identities=22% Similarity=0.341 Sum_probs=203.6
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|++..+..||||++..... ..++|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~ 257 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 257 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEe
Confidence 67788999999999999998888899998864332 13579999999999999999999999976 3 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999997555567999999999999999999999988 99999999999999999999999999874321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+... ..+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~----------~~~ 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRM----------PCP 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------CCC
Confidence 2346999999999999999999999999999999 99999532 333333333332111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+++++.++|.+||+.||++|||+.++++.|+++.....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 3455778999999999999999999999999999876544
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=341.76 Aligned_cols=263 Identities=18% Similarity=0.247 Sum_probs=207.6
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++...+....+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 3578889999999999999976 4889999988643321 1245688999999999999999999999876554679
Q ss_pred EEEeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEccccCc
Q 004124 558 MVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kLsDFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999997543 234999999999999999999999998 9999999999999 88889999999998
Q ss_pred cCCC--------CCCccccchhhhc--------cCCCCCCCchHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcC
Q 004124 633 NNTT--------AAKTGSAAMELLE--------TSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGE 694 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~--------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~ 694 (772)
+... .++..|+|||.+. +..++.++|||||||++|||+||+.||.... ....+.+.....+.
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 6432 2456899999875 5788999999999999999999999996322 22334444444432
Q ss_pred CCC--ccc---cC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 695 QPL--KDI---VD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 695 ~~~--~~~---~d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+- ..+ .. +............+.+++.+||+.||++|||++|+++...+....
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 210 000 00 111134467788899999999999999999999999988875443
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=344.29 Aligned_cols=252 Identities=25% Similarity=0.402 Sum_probs=200.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++|++.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~ 78 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVM 78 (307)
T ss_dssp EEEEEEECCSSSEEEEEEET-TEEEEEEECSST-------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEE
T ss_pred eeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEE
Confidence 67788999999999999986 678999987532 234679999999999999999999998864 248999
Q ss_pred eccCCCChhhhhhhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCC-CCeEeeCCCCCCeEECCCCc-EEEccccCccCC--
Q 004124 561 EYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHMHQLT-PPIAHRNLQSSSIYLTEDYA-AKISDFSFWNNT-- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~-~~l~~~~~~~Ia~~ia~gL~yLH~~~-~~IvHrDLKp~NILld~~~~-~kLsDFGla~~~-- 635 (772)
||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ .+|+||||||+|||++.++. +||+|||++...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999964332 35789999999999999999999832 24999999999999988876 799999997543
Q ss_pred ----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||................+..+ .....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 228 (307)
T 2eva_A 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP----------PLIKN 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC----------CCBTT
T ss_pred ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC----------Ccccc
Confidence 2356689999999999999999999999999999999999975444433333332222111 11223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
.+.++.+++.+||+.||++|||+.|+++.|+.+.+..+....|
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 271 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence 4467889999999999999999999999999998776654443
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=358.46 Aligned_cols=262 Identities=12% Similarity=0.154 Sum_probs=198.6
Q ss_pred cccccccCccceEEEEEEEEcC------CcEEEEEEeeecccchhh------hhHHHHHHHHHHHHhcCCCCcccceeEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGY 547 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~------~~~vaVK~~~~~~~~~~~------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~ 547 (772)
+++.+.+|+|+||+||+|++.. ++.||||++......... ......+.+|+..+..++|||||+++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 3778899999999999999765 368999987654321100 0011235567778889999999999999
Q ss_pred EEcCC--CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCc
Q 004124 548 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYA 623 (772)
Q Consensus 548 ~~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~ 623 (772)
+.... ....++||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+.+ |+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEESSCTTC
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEecCCCCe
Confidence 87642 12579999999 9999999864 3467999999999999999999999998 99999999999998 8899
Q ss_pred EEEccccCccCC----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHH-
Q 004124 624 AKISDFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW- 686 (772)
Q Consensus 624 ~kLsDFGla~~~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~- 686 (772)
+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||..........
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 999999998532 115668999999999999999999999999999999999997433322111
Q ss_pred -HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 687 -ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 687 -~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
...... ..+..++++.+. ...++.++.+++..||+.||++||++.+|++.|+++.....
T Consensus 273 ~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 273 DSKIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111111 111111111110 02235688999999999999999999999999998876543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=355.76 Aligned_cols=245 Identities=20% Similarity=0.332 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+.. .+..||||++.... .....++|.+|++++++++|||||+++|++...+ ..
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 121 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY----TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PV 121 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ce
Confidence 56778899999999999865 56789999886432 2334568999999999999999999999998876 56
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.++++. ....+++..+..|+.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999999963 3456899999999999999999999988 9999999999999999999999999986432
Q ss_pred C------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~-------- 268 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYR-------- 268 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEE--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC--------
Confidence 1 1235999999999999999999999999999998 99999533 23333333322210
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...+..++.++.+++.+||+.||++||++.||++.|+++..
T Consensus 269 --~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 269 --LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 01122345678999999999999999999999999998754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=342.11 Aligned_cols=238 Identities=19% Similarity=0.264 Sum_probs=198.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|+.+++.++|||||++++++.+.+ ..++|
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv 84 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMI 84 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEE
Confidence 67889999999999999975 68899999986532211 122456889999999999999999999998876 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 999999999999863 456899999999999999999999988 999999999999999999999999998643
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+.... +....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 227 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAELRF-----------PPFFN 227 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHCCCCC-----------CTTSC
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCC-----------CCCCC
Confidence 23567899999999999999999999999999999999999643 3444444444443221 22344
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.++.+++.+||+.||++|| +++|+++
T Consensus 228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 6788999999999999999 8888875
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=341.39 Aligned_cols=247 Identities=23% Similarity=0.367 Sum_probs=191.9
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc--CCCCcccceeEEEEcC--CCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEED--EPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~--l~HpNIV~l~g~~~~~--~~~~ 555 (772)
+++++.+|+|+||+||+|+. +++.||||++.... ...+.+|.+++.. ++||||+++++++... ....
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 36788999999999999998 58899999875432 2345666666665 7999999999987653 2225
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILld~~~~~kLs 627 (772)
.++||||+++|+|.++++ ...+++..+..|+.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEEC
T ss_pred eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEe
Confidence 799999999999999984 346899999999999999999999 766 9999999999999999999999
Q ss_pred cccCccCC-------------CCCCccccchhhhccC------CCCCCCchHHHHHHHHHHHcC----------CCcccC
Q 004124 628 DFSFWNNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RISYSI 678 (772)
Q Consensus 628 DFGla~~~-------------~~~~~~~~aPE~~~~~------~~s~ksDVwSfGvvL~ELltG----------~~P~~~ 678 (772)
|||+++.. ..++..|+|||.+.+. .++.++|||||||++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99987421 1456689999998766 455789999999999999999 788753
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 679 EN---GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.. ....... ............ .........+.++.+++.+||+.||++|||+.||++.|+++
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMR-KVVCVDQQRPNI---PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHH-HHHTTSCCCCCC---CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhh-HHHhccCCCCCC---ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21 2222222 222111111110 01113356778999999999999999999999999999876
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=351.80 Aligned_cols=238 Identities=19% Similarity=0.261 Sum_probs=197.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+.+|.+++..+ +|||||++++++.+.+ ..++
T Consensus 26 ~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 101 (353)
T 3txo_A 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ--DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFF 101 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc--hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEE
Confidence 78889999999999999965 58899999987542211 22345688999999988 7999999999998877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999999864 356899999999999999999999998 999999999999999999999999998742
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++||||+||++|||+||+.||... +..+....+..+.....
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~p----------- 244 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILNDEVVYP----------- 244 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC-----------
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC-----------
Confidence 23566899999999889999999999999999999999999643 44455555555432221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSM------RGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~------~evl~ 739 (772)
.....++.+++.+||+.||++||++ .|+++
T Consensus 245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2234678899999999999999998 66664
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=348.07 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=201.3
Q ss_pred cccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.+++.+.+|+|+||+||+|+.. +|..+|+|.+........ .....+.+.+|++++.+++|||||++++++.+.+ .
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 89 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--D 89 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--E
Confidence 44578889999999999999975 688999999876543221 1112467999999999999999999999998876 7
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSF 631 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kLsDFGl 631 (772)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 899999999999999985 3457999999999999999999999998 99999999999998776 799999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+......
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~---- 239 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDE---- 239 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCH----
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCc----
Confidence 86432 3566799999999999999999999999999999999999643 334444444433221110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......++++.+++.+||..||++|||+.|+++
T Consensus 240 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 240 ---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111234567889999999999999999999875
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=349.46 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||.||+|+.. +++.||||.+.... .....+.|.+|++++++++||||+++++++...+
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 123 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK-- 123 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--
Confidence 67888999999999999975 34789999886432 2334568999999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhc----------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE----------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~----------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++.... ...+++..++.|+.||++||+|||+.+ |+|||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlk 201 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLA 201 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCC
Confidence 5699999999999999996532 156899999999999999999999998 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||++.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM- 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence 99999999999999999987522 123446999999998999999999999999999999 99999533
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
...+.......+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 281 -~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 -AHEEVIYYVRDGNI----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -CHHHHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -ChHHHHHHHhCCCc----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33343333333221 1122334567899999999999999999999999999987644
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=350.52 Aligned_cols=244 Identities=20% Similarity=0.342 Sum_probs=191.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcE----EEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~----vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|++. +++. |++|.+.... .....++|.+|++++++++|||||+++++|....
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 90 (327)
T 3poz_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---
T ss_pred ccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---
Confidence 67888999999999999964 3443 4666554322 1223467999999999999999999999998754
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+++|+|.+++.. ....+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred eEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 5899999999999999864 3456999999999999999999999998 999999999999999999999999987532
Q ss_pred C-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 T-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. .++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+.. .
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~-~------ 238 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER-L------ 238 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-C------
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCC-C------
Confidence 1 12347999999999999999999999999999999 99999643322 22222222211 1
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..+..++.+++.+||+.||++||++.|+++.|+.+..
T Consensus 239 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 ---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1122344678899999999999999999999999988754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=370.56 Aligned_cols=244 Identities=22% Similarity=0.370 Sum_probs=202.5
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|++.. +..||||.+..... ..++|.+|+++|++++|||||+++|+|...+ ..++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 667889999999999999874 78899998864322 1367999999999999999999999998876 56999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
||||++|+|.+++.......+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999997655567999999999999999999999998 99999999999999999999999999864321
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+.......+ ... ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-~~~---------~~ 440 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKD-YRM---------ER 440 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT-CCC---------CC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC-CCC---------CC
Confidence 1236999999998999999999999999999999 999996433 22222222222 111 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+..+++++.+||.+||+.||++||||.||++.|+.+..
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 23455788999999999999999999999999998753
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=353.23 Aligned_cols=259 Identities=20% Similarity=0.333 Sum_probs=203.8
Q ss_pred HHHHHHhhcccccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCccc
Q 004124 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 542 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV 542 (772)
.+++...++| ++.+.+|+|+||.||+|++. +++.||||++..... ....+.+.+|++++.++ +|||||
T Consensus 15 ~~~~~~~~~y-~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 15 SKWEFPRDRL-KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp HHHBCCGGGE-EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccccccce-eeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC----HHHHHHHHHHHHHHHhhcCCccee
Confidence 3333333443 77889999999999999842 457899998864321 23356799999999999 899999
Q ss_pred ceeEEEEcCCCceEEEEEeccCCCChhhhhhhhcc---------------------------------------------
Q 004124 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--------------------------------------------- 577 (772)
Q Consensus 543 ~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------- 577 (772)
++++++.+.+. ..++||||+++|+|.++++....
T Consensus 90 ~~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 90 NLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CEEEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999987553 36999999999999999965321
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 578 -------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 578 -------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 12889999999999999999999998 99999999999999999999999999864321
Q ss_pred ----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 638 ----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 638 ----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ........+ ...
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~-~~~--------- 315 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEG-TRM--------- 315 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHT-CCC---------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcC-CCC---------
Confidence 2335999999999999999999999999999999 999996543322 222222222 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+...+.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 316 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 11123446788999999999999999999999999988754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=342.33 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=194.3
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+..+++.||+|++...... ....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 97 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED---EGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLV 97 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEE
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc---chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEE
Confidence 4788899999999999999988999999998654321 233467899999999999999999999998776 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 98 FEFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EcCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 99997 588888753 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCC--Ccccc-----
Q 004124 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQP--LKDIV----- 701 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~--~~~~~----- 701 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||...... ....+........+ .....
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 24567999999865 56899999999999999999999999754322 22222222211111 00000
Q ss_pred --------C-CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 --------D-PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 --------d-~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+ .......+...+++.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0001112234567899999999999999999999986
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=350.92 Aligned_cols=235 Identities=17% Similarity=0.273 Sum_probs=190.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|..++.++ +|||||++++++.+.+ ..++
T Consensus 55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 130 (396)
T 4dc2_A 55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 130 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEE
Confidence 77889999999999999975 57789999987543222 22234578899999887 8999999999998877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|..++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999999863 356999999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-------CHHHHHHHHhhcCCCCccccC
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-------SLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...............
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 280 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 280 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC------
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC------
Confidence 2346679999999999999999999999999999999999963221 111222222322211
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 281 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 223345678899999999999999986
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=340.28 Aligned_cols=262 Identities=11% Similarity=0.169 Sum_probs=207.2
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++.+.+|+|+||+||+|+. .+++.||||++..... .+.+.+|++++.++ +|+||+++++++.... ..+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~ 82 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNV 82 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeE
Confidence 36788899999999999995 5788999998754322 23578899999999 8999999999998776 679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccCc
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kLsDFGla 632 (772)
+||||+ +|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 83 lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999999 99999999643 346999999999999999999999988 999999999999987766 999999987
Q ss_pred cCCC----------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCC
Q 004124 633 NNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQ 695 (772)
Q Consensus 633 ~~~~----------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~ 695 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 5322 245679999999999999999999999999999999999975432 22222222211100
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAE 763 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~ 763 (772)
. .........+++++.+++.+||+.||++||++++|++.|+++...... ....+..|+.
T Consensus 239 ~------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~---~~~~~~dw~~ 297 (298)
T 1csn_A 239 S------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT---TEDENFDWNL 297 (298)
T ss_dssp H------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC---CSCSCCGGGC
T ss_pred C------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC---CCCCccccCC
Confidence 0 001111223457899999999999999999999999999998775443 2345677754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=353.75 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=200.7
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||+||+|++. ++..||||++.... ......++.+|+.++++++|||||++++++...+
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc----ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 67889999999999999853 45689999885432 1334467999999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE-----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kL 626 (772)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceEEE
Confidence 5699999999999999997543 245899999999999999999999998 99999999999999554 5999
Q ss_pred ccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGG 303 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCC
Confidence 999987521 123457999999999999999999999999999998 99999543 3334444333332
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.. ..+..++.++.+++.+||+.||++||++.||++.|+.+...
T Consensus 304 ~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 RM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11 11223446788999999999999999999999999988664
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-39 Score=337.08 Aligned_cols=248 Identities=22% Similarity=0.369 Sum_probs=202.9
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|.+..... ..+.|.+|++++++++||||+++++++.++ ..++||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 86 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIIT 86 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEE
Confidence 67888999999999999998888999998864321 135789999999999999999999998754 358999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999999996544447999999999999999999999998 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+... ..+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~ 232 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRM----------VRP 232 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCC----------CCc
Confidence 2346899999988889999999999999999999 99999533 333333333332111 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
..+++++.+++.+||+.||++|||+.++++.|+++.......
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 234567889999999999999999999999999987765543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=347.39 Aligned_cols=247 Identities=16% Similarity=0.219 Sum_probs=197.8
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++++.+|+|+||+||+|+.. +++.||||++.............+.+.+|++++++++|||||++++++.+.+ ..+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~ 102 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLY 102 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3578889999999999999964 6889999998653322111112467999999999999999999999998877 689
Q ss_pred EEEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCc
Q 004124 558 MVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kLsDFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999998876432 345899999999999999999999998 999999999999986654 999999987
Q ss_pred cCC---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 633 NNT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 633 ~~~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
+.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||... ..+.......+..... +
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~----~ 253 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMN----P 253 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCC----H
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCC----c
Confidence 532 23466799999999999999999999999999999999999643 2333333333322111 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 254 ---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 ---RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011223567899999999999999999999985
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=330.63 Aligned_cols=244 Identities=20% Similarity=0.343 Sum_probs=203.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|+..++..||+|++...... .+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVT 82 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEE
Confidence 677889999999999999988889999998654321 257899999999999999999999998876 569999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99999999999864 3456899999999999999999999998 9999999999999999999999999876431
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~----------~~ 227 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY----------KP 227 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC----------CC
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCC----------CC
Confidence 22346999999998999999999999999999999 89999533 3334444433331111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22346788999999999999999999999999998763
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=345.40 Aligned_cols=239 Identities=17% Similarity=0.290 Sum_probs=191.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~------ 553 (772)
++++.+|+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++|||||++++++.+...
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 77889999999999999976 789999999875432 2345679999999999999999999999865432
Q ss_pred -------------------------------------------------ceEEEEEeccCCCChhhhhhhhc-cCCCCHH
Q 004124 554 -------------------------------------------------FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWA 583 (772)
Q Consensus 554 -------------------------------------------------~~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~ 583 (772)
...++||||+++|+|.+++.... ....++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 12699999999999999997542 2346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---------------------CCCccc
Q 004124 584 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------------------AAKTGS 642 (772)
Q Consensus 584 ~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---------------------~~~~~~ 642 (772)
.+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... .++..|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 88999999999999999988 9999999999999999999999999876432 255679
Q ss_pred cchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHH
Q 004124 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN 722 (772)
Q Consensus 643 ~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~ 722 (772)
+|||.+.+..++.++|||||||++|||+||..|+.. ........... ...........++.+++.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRNL----------KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHTT----------CCCHHHHHHCHHHHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhcc----------CCCcccccCChhHHHHHHH
Confidence 999999999999999999999999999999776521 11111111111 1112234455678899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 004124 723 CVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 723 Cl~~dP~~RPs~~evl~ 739 (772)
||+.||++|||+.|+++
T Consensus 309 ~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHCSSGGGSCCHHHHHH
T ss_pred HccCCCCcCCCHHHHhh
Confidence 99999999999999986
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=369.98 Aligned_cols=245 Identities=22% Similarity=0.351 Sum_probs=204.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|++..+..||||++..... ..++|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~ 340 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 340 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEee
Confidence 67788999999999999998888899998864332 13579999999999999999999999976 3 468999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
|||++|+|.++++......+++..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999999997555567999999999999999999999998 99999999999999999999999999875321
Q ss_pred -------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+.. . ..+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~---------~~~ 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYR-M---------PCP 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCC-C---------CCC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-C---------CCC
Confidence 2346999999999999999999999999999999 99999532 33343333333211 0 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+++++.+||.+||+.||++|||+.+|++.|+++....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 344567899999999999999999999999999986543
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=341.83 Aligned_cols=246 Identities=18% Similarity=0.270 Sum_probs=199.5
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++.+.+|+|+||.||+|+.. ++..+|+|.+........ .....+.+.+|++++++++|||||++++++...+ ..
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 89 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DV 89 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EE
Confidence 3577889999999999999975 688999999876543211 1112467999999999999999999999998876 68
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFW 632 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kLsDFGla 632 (772)
++||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999985 3456999999999999999999999988 99999999999999887 8999999998
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+.............
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~------ 237 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFE------ 237 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCC------
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcC------
Confidence 6432 3456799999999899999999999999999999999999643 23333333333221111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......+.++.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 238 -DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111234567889999999999999999999986
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=345.32 Aligned_cols=238 Identities=17% Similarity=0.263 Sum_probs=199.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ....+.+.+|++++.+++||||+++++++.+.+ ..++|
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 119 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMV 119 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEE
Confidence 67889999999999999975 68899999986543211 223467889999999999999999999999876 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 999999999999864 346899999999999999999999998 9999999999999999999999999986432
Q ss_pred ---CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+...+ +...+
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 262 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGKVRF-----------PSHFS 262 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------CTTCC
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcCCCCC-----------CCCCC
Confidence 3456799999999999999999999999999999999999643 3444455555443221 22345
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
.++.+++.+||+.||++||+ ++||++
T Consensus 263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 67889999999999999998 788765
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=343.05 Aligned_cols=235 Identities=17% Similarity=0.273 Sum_probs=192.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|+.++.++ +|||||++++++.+.+ ..++
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 87 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 87 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEE
Confidence 67888999999999999975 57889999987543222 33456788999999988 8999999999998876 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999863 356899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-------CHHHHHHHHhhcCCCCccccC
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-------SLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ...............
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC------
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC------
Confidence 2346679999999999999999999999999999999999964211 111222222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 238 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 223345678899999999999999996
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=342.71 Aligned_cols=241 Identities=17% Similarity=0.249 Sum_probs=198.8
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. ++..+|+|.+.... .....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 78 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVM 78 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEE
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEE
Confidence 467888999999999999975 57889999876432 22456889999999999999999999998877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEccccCccCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kLsDFGla~~~~ 636 (772)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999999853 3346899999999999999999999998 999999999999987 7899999999986543
Q ss_pred C--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 A--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 ~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+....+..+...... ..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 226 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDE-------EA 226 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCH-------HH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCCh-------hh
Confidence 2 455799999998888999999999999999999999999643 344444554444322110 01
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12345678999999999999999999999874
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=344.70 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=200.5
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|+|+||.||+|+. .++..||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA----SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC----CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 6778899999999999986 234789999886432 2334567999999999999999999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhcc----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEA----------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~----------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+|||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dik 177 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLA 177 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCCS
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Ccccccc
Confidence 56999999999999999975322 24889999999999999999999998 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||+++++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999876332 12345999999998899999999999999999999 999996433
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
. .........+... ..+..+++++.+++.+||+.||++||++.|+++.|+++...
T Consensus 258 ~--~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 P--ERLFNLLKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G--GGHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H--HHHHHHhhcCCcC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2 2222222222110 11233456789999999999999999999999999998654
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=349.12 Aligned_cols=244 Identities=20% Similarity=0.340 Sum_probs=193.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcE----EEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~----vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+.. ++.. |++|.+...... .....+.+|+.++++++|||||++++++.+. .
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 88 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---S 88 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---S
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---c
Confidence 67888999999999999964 4443 666665432211 1124578899999999999999999998643 4
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence 68999999999999998642 346889999999999999999999998 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERL------- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBC-------
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC-------
Confidence 21 2336999999999999999999999999999999 99999644322 222222222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+.+..
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111233467789999999999999999999999998754
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=339.37 Aligned_cols=240 Identities=19% Similarity=0.270 Sum_probs=190.5
Q ss_pred cccccccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||.||+|+. .+++.+|+|++....... .......+.+|++++++++|||||++++++...+ .
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 95 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--K 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--C
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--E
Confidence 37788999999999999997 478899999987543211 1223456889999999999999999999998876 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 7999999999999999853 346889999999999999999999998 999999999999999999999999987632
Q ss_pred ---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 ---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+.......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~--------- 240 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLNL--------- 240 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCC---------
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCC---------
Confidence 23566799999999889999999999999999999999999643 3344444444432221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+.....++.+++.+||+.||++|| ++.|+++
T Consensus 241 --p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 --PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 223446788999999999999999 7778765
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=345.11 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=199.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. ++..||+|++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~l 105 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 105 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 477889999999999999975 6889999998754322 234467999999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++..
T Consensus 106 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999998853 456899999999999999999999998 9999999999999865 45999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+..... .+
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~---~~---- 252 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYP---SP---- 252 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---TT----
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCC---cc----
Confidence 2 3556799999999989999999999999999999999999643 33444444444322211 11
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.||++||++.|+++.
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112345678899999999999999999998864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=344.47 Aligned_cols=238 Identities=17% Similarity=0.225 Sum_probs=196.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..++
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 98 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 98 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEE
Confidence 77889999999999999976 47889999886543211 22345688999999988 8999999999998877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999999863 346899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+......+ +
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 241 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEHNVAY-----------P 241 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 23466799999999999999999999999999999999999643 4445555555443221 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...+.++.+++.+||+.||++||+ ++|+.+
T Consensus 242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 234567889999999999999995 466654
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=348.40 Aligned_cols=239 Identities=22% Similarity=0.330 Sum_probs=194.7
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||+||+|+. .+++.||+|++....... ......+.+|+++++.++|||||++++++...+ ..++
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 86 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVM 86 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 47788999999999999996 578899999886432211 122357899999999999999999999999877 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 7899998854 356899999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..+ +.++|||||||++|||++|+.||...... .....+.......+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------------~~~~~i~~~~~~~p 228 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-------------NLFKKVNSCVYVMP 228 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-------------TCBCCCCSSCCCCC
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-------------HHHHHHHcCCCCCc
Confidence 34568999999987776 68999999999999999999999643211 01111111112233
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 4456778899999999999999999999864
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=349.87 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=196.2
Q ss_pred cccccccCcc--ceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 480 SNIIGSFSDG--TVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G--~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+++++.+|+| +||+||+|+.. +++.||||++..... .....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 101 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC---SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--EL 101 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EE
Confidence 4788899999 99999999976 689999999875432 2334567899999999999999999999999877 68
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
++|||||++|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 99999999999999997655567999999999999999999999998 999999999999999999999999975321
Q ss_pred ---------------CCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC-C
Q 004124 636 ---------------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP-L 697 (772)
Q Consensus 636 ---------------~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~-~ 697 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ......+..+ .
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 257 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCL 257 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC--------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcc
Confidence 134456899999977 6799999999999999999999999964332111 1111100000 0
Q ss_pred ------------------------ccc----------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 ------------------------KDI----------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ------------------------~~~----------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+. .+..........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0000001223345679999999999999999999999864
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=333.49 Aligned_cols=246 Identities=24% Similarity=0.396 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. +..+|||++........ ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 85 (271)
T 3dtc_A 10 TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDI-SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVM 85 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEE
T ss_pred eeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccH-HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEE
Confidence 66788999999999999975 78899998865432221 222467999999999999999999999998876 569999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCC-CeEeeCCCCCCeEECC--------CCcEEEccccC
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNLQSSSIYLTE--------DYAAKISDFSF 631 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~-~IvHrDLKp~NILld~--------~~~~kLsDFGl 631 (772)
||+++|+|.+++. ...+++..+..++.|++.||+|||+.+. +|+||||||+|||++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999884 3568999999999999999999999773 4999999999999986 67899999999
Q ss_pred ccCC-------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 632 WNNT-------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 632 a~~~-------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
++.. ..++..|+|||.+.+..++.++||||||+++|||+||+.||.... ...............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~------- 233 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLAVAYGVAMNKLAL------- 233 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHTSCCCC-------
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHhhhcCCCCC-------
Confidence 8632 234567999999999999999999999999999999999996432 222222222221110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 234 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 --PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11233456788999999999999999999999999864
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=353.33 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=194.5
Q ss_pred ccccccCccceEEEEEEEEc--CC--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--SG--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--~~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++. ++ ..+|||.+.... .....++|.+|++++++++|||||+++++|...+. ..
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~ 166 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 166 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS----CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CC
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-Ce
Confidence 45678899999999999864 22 357777765322 12345789999999999999999999999865432 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccc
Confidence 899999999999999953 3456899999999999999999999998 9999999999999999999999999986331
Q ss_pred -------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 637 -------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 637 -------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.++..|+|||.+.+..++.++|||||||++|||+| |..||...... +.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~------ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRL------ 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCC------
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCC------
Confidence 12236999999999999999999999999999999 67777543221 112222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCC
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 752 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 752 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++........
T Consensus 316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 0112345678999999999999999999999999999987666543
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=345.48 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEEcCCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc--
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-- 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~-- 554 (772)
++.+.+|+|+||+||+|+..... .||||++...... ....++|.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 67888999999999999865432 7899988654221 23356899999999999999999999999875421
Q ss_pred --eEEEEEeccCCCChhhhhhhhc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 555 --TRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 555 --~~~LV~Ey~~~GsL~~~L~~~~----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCCCEEEee
Confidence 2389999999999999986432 225899999999999999999999998 99999999999999999999999
Q ss_pred ccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCC
Q 004124 629 FSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 629 FGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.......+...
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~ 258 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRL 258 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCC
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHHhcCCCC
Confidence 999864321 2336999999999999999999999999999999 9999964332 2222333322111
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+...+.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 259 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 259 ----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 112334567899999999999999999999999999987643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=343.40 Aligned_cols=240 Identities=20% Similarity=0.323 Sum_probs=193.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||||++..+... ...+.+.+|+.++++++|||||++++++.+.+ ..++|
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv 83 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 83 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEE
Confidence 77889999999999999976 7889999998654322 22356889999999999999999999999877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 84 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 99999999999985 3345899999999999999999999988 999999999999999999999999988532
Q ss_pred -------CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 -------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..+ +.++|||||||++|||+||+.||.........+.. ........ .
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~~----~----- 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL----N----- 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH-HHTTCTTS----T-----
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-HhcccccC----C-----
Confidence 235667999999977765 78899999999999999999999754443232222 11111110 0
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.......++.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112345677899999999999999999999864
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=337.34 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=202.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+. .+++.||+|++......+ ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 109 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNI 109 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEE
Confidence 36788899999999999996 478899999886533222 334567999999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999998642 3456899999999999999999999998 9999999999999999999999999875332
Q ss_pred ---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||...................+ ...
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~------ 259 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLP------ 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCC------
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCc------
Confidence 245579999999989999999999999999999999999976555555554444332211 110
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
....+.++.+++.+||+.||++||++.+|++.|+++.+....
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 123446788999999999999999999999999999876544
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-38 Score=351.85 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=198.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|.. .++..+|+|++..+... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 87 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYL 87 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH---HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEE
Confidence 47888999999999999986 46889999988765432 234567999999999999999999999998877 7799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+++..
T Consensus 88 v~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999853 456999999999999999999999998 99999999999998 4688999999998543
Q ss_pred C---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 T---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ~---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
. .++..|+|||.+.+..++.++||||+||++|||++|+.||... +..+.......+...... +..
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~---~~~- 237 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPS---PEW- 237 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCT---TTT-
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCc---ccc-
Confidence 2 3566899999999999999999999999999999999999643 344444444444322211 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...++++.+++.+||+.||++|||+.|+++.
T Consensus 238 ---~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 ---DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2334678899999999999999999999863
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=340.12 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=200.0
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc--eE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF--TR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~--~~ 556 (772)
+++.+.+|+|+||.||+|+. .+++.||||++......+ ......|.+|++++.+++|||||++++++...... ..
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS--HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC--HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 47788999999999999996 578899999986543222 34456799999999999999999999998764422 34
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 899999999999999864 346899999999999999999999998 9999999999999999999999999986321
Q ss_pred ------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 637 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+..............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~----- 240 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--SPVSVAYQHVREDPIPPS----- 240 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCCCHH-----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCCCcc-----
Confidence 2466899999999999999999999999999999999999643 333333333333211110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHHhhhhcCCC
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRG-IAAKLKEITAMEPD 750 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-vl~~L~~i~~~~~~ 750 (772)
......+.++.+++.+||+.||++||++.+ +...+..+....+.
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~ 285 (311)
T 3ork_A 241 --ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPP 285 (311)
T ss_dssp --HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCC
T ss_pred --cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCC
Confidence 111234567889999999999999996555 55666666554443
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=346.82 Aligned_cols=254 Identities=23% Similarity=0.324 Sum_probs=203.5
Q ss_pred cccccccCccceEEEEEEEEc-----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.++++.+|+|+||+||++.+. +++.||||++.... .....+.|.+|++++++++||||+++++++.+.+..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA----GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc----ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 378899999999999998753 67889999986432 233456799999999999999999999999876544
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred eEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 67999999999999999853 34899999999999999999999998 99999999999999999999999998764
Q ss_pred CCC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH------------HHHHH
Q 004124 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN------------WASEY 690 (772)
Q Consensus 635 ~~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~------------~~~~~ 690 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||+.||......... .....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 322 233589999999889999999999999999999999998532111000 01111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
..... ....+..++.++.+++.+||+.||++|||+.|+++.|+++.+....+
T Consensus 264 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 264 LERGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred Hhccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 11110 11122345578999999999999999999999999999987765543
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=349.76 Aligned_cols=240 Identities=20% Similarity=0.310 Sum_probs=195.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|++++.+++|||||++++++.+.+ ..++|
T Consensus 18 ~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv 93 (384)
T 4fr4_A 18 EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMV 93 (384)
T ss_dssp EEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEE
Confidence 77889999999999999965 57889999886533211 223467889999999999999999999999877 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999985 3456999999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 ----TAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+. +..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~----------- 238 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT----------- 238 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-----------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC-----------
Confidence 23566799999986 34589999999999999999999999975433 333333333322211
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPS-MRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs-~~evl~ 739 (772)
++...+.++.+++.+||+.||++||+ +.++.+
T Consensus 239 ~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 22334567899999999999999998 666653
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=336.00 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=201.8
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+. .+++.||||.+..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh----HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 6778899999999999985 3467899998864322 23356799999999999 9999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEA----------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 101 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil 177 (313)
T 1t46_A 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNIL 177 (313)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEE
T ss_pred -CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEE
Confidence 56999999999999999975432 24899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCCCC-----------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~~~-----------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++..... +..|+|||.+.+..++.++|||||||++|||+| |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~ 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H
Confidence 999999999999998654321 235999999999999999999999999999999 999996443321 1
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
........... . .+...+.++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 257 -~~~~~~~~~~~--~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 257 -FYKMIKEGFRM--L-------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp -HHHHHHHTCCC--C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred -HHHHhccCCCC--C-------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 12222211110 0 112344678899999999999999999999999998876543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=346.67 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=195.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.+ +++.||+|++....... ....+.+..|.+++..+ +|||||++++++.+.+ ..++
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~l 95 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFF 95 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEE
Confidence 67888999999999999975 67889999986542211 12235678899999887 9999999999998877 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999999863 356899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+...+ +
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 238 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPFY-----------P 238 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 23456799999999999999999999999999999999999643 3344444444432221 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMR-GIA 738 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~-evl 738 (772)
...+.++.+++.+||+.||++||++. |+.
T Consensus 239 ~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23446788999999999999999997 554
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=336.72 Aligned_cols=244 Identities=21% Similarity=0.251 Sum_probs=189.9
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh---------------------hhhHHHHHHHHHHHHhcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---------------------SKNLESQFRKKIDTLSKVN 537 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~---------------------~~~~~~~f~~Ei~~L~~l~ 537 (772)
+++.+.+|+|+||.||+|+.. +++.||||++........ .....+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 367888999999999999964 678899999865432110 0112356899999999999
Q ss_pred CCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 538 HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
||||+++++++.+......++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEE
Confidence 999999999998744346899999999999988753 356999999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCC---------CCCccccchhhhccCC---CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~---------~~~~~~~aPE~~~~~~---~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++... .++..|+|||.+.+.. ++.++|||||||++|||++|+.||... ....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~ 247 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE--RIMC 247 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--SHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--cHHH
Confidence 9999999999999876432 3456799999987654 377899999999999999999999643 3333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+............. ....++++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQALEFPD---------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCCCCCS---------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccCCCCC---------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 33333332211110 1123467889999999999999999999875
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=343.15 Aligned_cols=247 Identities=13% Similarity=0.169 Sum_probs=199.5
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+. .+++.||||.+...... +.+.+|+++++++ +||||+++++++...+ ..++
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~l 82 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-------PQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAM 82 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-------CCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEE
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-------HHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEE
Confidence 6788899999999999996 57889999987644321 3588999999999 9999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccCcc
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kLsDFGla~ 633 (772)
||||+ +|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99999 99999998643 457999999999999999999999998 999999999999998887 9999999986
Q ss_pred CC----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC-CCHHHHHHHHhhcCCC
Q 004124 634 NT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQP 696 (772)
Q Consensus 634 ~~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~-~~~~~~~~~~~~~~~~ 696 (772)
.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....+..........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 32 234568999999999999999999999999999999999997543 2333333322211100
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.. ........+ ++.+++..||+.||.+||++.+|.+.|+++...
T Consensus 239 ~~------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 239 TP------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp SC------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CC------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00 000111233 899999999999999999999999999987654
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=338.00 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=197.0
Q ss_pred ccccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 479 FSNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
++++++.+|+|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 357889999999999999984 3678999999864432 2224678999999999999999999999987643
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccc
Confidence 367999999999999999854 3456899999999999999999999988 9999999999999999999999999875
Q ss_pred CCC------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC------------CCHHHHHHH
Q 004124 634 NTT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------------GSLENWASE 689 (772)
Q Consensus 634 ~~~------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~------------~~~~~~~~~ 689 (772)
... .++..|+|||.+.+..++.++||||||+++|||+||+.|+.... .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 432 22335899999998899999999999999999999998864210 000111111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
...... ....+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 255 ~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 11122345578899999999999999999999999999874
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=348.23 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=188.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHH-HhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~-L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.+ +++.+|+|++....... ......+.+|..+ ++.++|||||++++++.+.+ ..++
T Consensus 41 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~l 116 (373)
T 2r5t_A 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYF 116 (373)
T ss_dssp EEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEE
Confidence 67888999999999999975 57889999987654322 2234556777776 57789999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999863 356889999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+......+ +
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~~~~~-----------~ 259 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNKPLQL-----------K 259 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--BHHHHHHHHHHSCCCC-----------C
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhcccCC-----------C
Confidence 23566799999999999999999999999999999999999643 3444445554432211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.....++.+++.+||+.||++||++.+.++.+
T Consensus 260 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 22346788999999999999999986544443
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=335.82 Aligned_cols=249 Identities=26% Similarity=0.480 Sum_probs=193.9
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++.+.+|+|+||+||+|+... .+|+|++...... ....+.|.+|++++++++||||+++++++... ..++|
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv 97 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIV 97 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEE
Confidence 3678899999999999998653 5899988654322 33456799999999999999999999977543 35899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999853 3456899999999999999999999998 9999999999999999999999999875322
Q ss_pred --------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 --------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 --------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||.... ...........+.. .+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSL------SPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSC------CCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhccccc------Ccch
Confidence 2456799999986 6678889999999999999999999996433 22222222222211 1112
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
......+++++.+++.+||+.||++||++.|+++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22233456789999999999999999999999999998764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=335.46 Aligned_cols=249 Identities=19% Similarity=0.286 Sum_probs=193.9
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+..+++.+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 78 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLV 78 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEE
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEE
Confidence 3678889999999999999988999999998654322 122356889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 999975 99888853 3356899999999999999999999988 999999999999999999999999987532
Q ss_pred -----CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCCCc---c-----
Q 004124 636 -----TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLK---D----- 699 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~~~---~----- 699 (772)
..++..|+|||.+.+ ..++.++||||+||++|||+||+.||.... ..+....... +..... .
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhhhccc
Confidence 134567999999865 458999999999999999999999996432 2222222221 100000 0
Q ss_pred ccCCcc--------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 IVDPTL--------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l--------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++.. .......++++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001110 1112334577889999999999999999999975
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=341.92 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=203.0
Q ss_pred cccccccCccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~ 550 (772)
+++.+.+|+|+||+||+|+.. ++..||+|++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC----cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 367788999999999999863 46789999886432 233456799999999999 99999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 616 (772)
.+ ..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||
T Consensus 113 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NI 188 (334)
T 2pvf_A 113 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNV 188 (334)
T ss_dssp SS--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGE
T ss_pred CC--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceE
Confidence 76 56999999999999999964321 34899999999999999999999998 99999999999
Q ss_pred EECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHH
Q 004124 617 YLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLE 684 (772)
Q Consensus 617 Lld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~ 684 (772)
|++.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~ 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVE 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHH
Confidence 999999999999998753321 2346999999988889999999999999999999 99999533 334
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
+.......+... ..+..++.++.+++.+||+.||++||++.|+++.|+++.......
T Consensus 267 ~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 267 ELFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp HHHHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhcCCCC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 444333333211 112234567889999999999999999999999999998765543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=361.51 Aligned_cols=250 Identities=18% Similarity=0.266 Sum_probs=197.5
Q ss_pred HhhcccccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 475 ACEDFSNIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
.+++| ++++.+|+|+||+||+|+... ++.+|+|++....... ......+.+|+.++..++|||||++++++.+.+
T Consensus 72 ~~~~y-~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~- 147 (437)
T 4aw2_A 72 HREDF-EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK--RAETACFREERDVLVNGDSKWITTLHYAFQDDN- 147 (437)
T ss_dssp CGGGE-EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS-
T ss_pred Chhhe-EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-
Confidence 34455 778899999999999999764 6789999886432111 112234889999999999999999999999877
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
..++|||||++|+|.+++.. ....+++..+..++.|++.||+|||+.+ ||||||||+|||++.++.+||+|||+++
T Consensus 148 -~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 148 -NLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp -EEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 78999999999999999963 2456999999999999999999999998 9999999999999999999999999885
Q ss_pred CC----------CCCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 634 NT----------TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 634 ~~----------~~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
.. ..++..|+|||.+. ...|+.++|||||||++|||+||+.||... +..+....++......
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~- 300 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERF- 300 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC-
T ss_pred hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccc-
Confidence 32 24567899999986 567899999999999999999999999643 3333333333211000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
..+......++++.+|+.+||..+|++ ||+++|+++.
T Consensus 301 -----~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 301 -----QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -----CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -----cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 000111224567889999999888888 9999999863
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=344.86 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=191.1
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+.+|+|+||.||+|+.. +++.||+|++..... ...+.|.+|++++++++|||||++++++...+ ..++|||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E 166 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-----KDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVME 166 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 456899999999999964 688999998875432 23467999999999999999999999999876 6899999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE--CCCCcEEEccccCccCCC---
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL--TEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl--d~~~~~kLsDFGla~~~~--- 636 (772)
|+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 167 ~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 167 YVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999998863 3346899999999999999999999998 9999999999999 677899999999986432
Q ss_pred -----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+....++.++|||||||++|||+||+.||... +..+....+........ +. ....
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~---~~----~~~~ 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDLE---DE----EFQD 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCSC---SG----GGTT
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccCCCC---hh----hhcc
Confidence 2566799999999889999999999999999999999999643 33444444444322111 11 1123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++++.+++.+||+.||++||++.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4567899999999999999999999987
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=342.11 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=197.3
Q ss_pred ccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+. .++..||||.+..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 6778899999999999996 2456799998864321 22346799999999999 9999999999998876
Q ss_pred ceEEEEEeccCCCChhhhhhhhcc---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEA---------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+|||||
T Consensus 123 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dik 199 (344)
T 1rjb_A 123 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLA 199 (344)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCS
T ss_pred -ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCC
Confidence 56999999999999999964322 24899999999999999999999988 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||++.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999864321 1235999999988999999999999999999998 999996543
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
.. ............. ..+...++++.+++.+||+.||++|||+.|+++.|+.+.+..+.
T Consensus 280 ~~--~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VD--ANFYKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CS--HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cH--HHHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 32 1122222221110 11123356789999999999999999999999999998776544
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=342.26 Aligned_cols=254 Identities=15% Similarity=0.211 Sum_probs=196.7
Q ss_pred HHHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc
Q 004124 472 LEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 472 l~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+....++| ++.+.+|+|+||+||+|+.. ++..+|+|++.............+.+.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 21 LLELQKKY-HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp HHHHHHHE-EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhe-eecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 33444444 78889999999999999964 67789999886543222223445789999999999999999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhc--------------------------------------cCCCCHHHHHHHHHHH
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------------------------------AEHLDWAMRLRIAMGM 592 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------~~~l~~~~~~~Ia~~i 592 (772)
.+ ..++||||+++|+|.+++.... ...+++..+..|+.|+
T Consensus 100 ~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 100 EQ--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp SS--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred CC--eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 76 6899999999999999884210 1123566778899999
Q ss_pred HHHHHHHhcCCCCeEeeCCCCCCeEECCCC--cEEEccccCccCC-------------CCCCccccchhhhcc--CCCCC
Q 004124 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDY--AAKISDFSFWNNT-------------TAAKTGSAAMELLET--SAVDL 655 (772)
Q Consensus 593 a~gL~yLH~~~~~IvHrDLKp~NILld~~~--~~kLsDFGla~~~-------------~~~~~~~~aPE~~~~--~~~s~ 655 (772)
+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.. ..++..|+|||.+.+ ..++.
T Consensus 178 ~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 178 FSALHYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHHTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHHCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 99999999998 99999999999998766 8999999987532 224567999999865 67899
Q ss_pred CCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHH
Q 004124 656 ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 656 ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
++|||||||++|||+||+.||... ...+............. .+ .....+.++.+++.+||+.||++||++.
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ 326 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGV--NDADTISQVLNKKLCFE---NP----NYNVLSPLARDLLSNLLNRNVDERFDAM 326 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCTT---SG----GGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCC--ChHHHHHHHHhcccccC---Cc----ccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999999999999999999533 33344444444322211 11 1122456788999999999999999999
Q ss_pred HHHH
Q 004124 736 GIAA 739 (772)
Q Consensus 736 evl~ 739 (772)
|+++
T Consensus 327 ~~l~ 330 (345)
T 3hko_A 327 RALQ 330 (345)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9987
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=357.30 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=196.2
Q ss_pred hhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 476 CEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.++| ++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|++++..++|||||++++++.+.+
T Consensus 68 ~~~y-~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-- 142 (410)
T 3v8s_A 68 AEDY-EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-- 142 (410)
T ss_dssp GGGE-EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred cccc-EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh--hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--
Confidence 3444 77889999999999999976 57889999886432111 111235889999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.++++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 78999999999999999853 35899999999999999999999998 99999999999999999999999999853
Q ss_pred C----------CCCCccccchhhhccCC----CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 635 T----------TAAKTGSAAMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~----------~~~~~~~~aPE~~~~~~----~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
. ..++..|+|||.+.... ++.++|||||||++|||+||+.||... +..+....++.+.....
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~-- 293 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLT-- 293 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCC--
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhcccccc--
Confidence 2 33567899999987655 889999999999999999999999643 33444444433211000
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
-+. ....+.++.+|+.+||+.+|++ ||+++||++.
T Consensus 294 -~p~----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 -FPD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -CCT----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -CCC----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000 0123467889999999999988 9999999864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=342.95 Aligned_cols=241 Identities=19% Similarity=0.249 Sum_probs=196.3
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||||++....... ....++|.+|++++++++|||||++++++...+ ..++|
T Consensus 57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 132 (348)
T 1u5q_A 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLV 132 (348)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEE
Confidence 6678899999999999996 578899999986543222 334467999999999999999999999998877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||++ |+|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp EECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 99997 788888753 3457999999999999999999999998 9999999999999999999999999986433
Q ss_pred --CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004124 637 --AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 --~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||... +..........+..+. .. ...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--~~~~~~~~~~~~~~~~--~~-------~~~ 277 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNESPA--LQ-------SGH 277 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--CC-------CTT
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhcCCCC--CC-------CCC
Confidence 3566899999984 577899999999999999999999999533 3333333444332211 11 122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++++.+++.+||+.||++|||+.|+++.
T Consensus 278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 278 WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 34678899999999999999999999864
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=348.08 Aligned_cols=261 Identities=14% Similarity=0.188 Sum_probs=203.8
Q ss_pred cccccccCccceEEEEEEEEcC---------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccc-------
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSS---------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN------- 543 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~---------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~------- 543 (772)
+++.+.+|+|+||+||+|+... ++.||+|.+... +.+.+|++++++++|||||+
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 4778899999999999999764 788999987632 35789999999999999998
Q ss_pred --------eeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCC
Q 004124 544 --------LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 615 (772)
Q Consensus 544 --------l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~N 615 (772)
+++++...+. ..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|
T Consensus 114 ~~~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~N 189 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAEN 189 (352)
T ss_dssp CTTCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGG
T ss_pred CCccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHH
Confidence 6777776332 679999999 999999997554567999999999999999999999998 9999999999
Q ss_pred eEECCCC--cEEEccccCccCCC----------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCccc
Q 004124 616 IYLTEDY--AAKISDFSFWNNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYS 677 (772)
Q Consensus 616 ILld~~~--~~kLsDFGla~~~~----------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~ 677 (772)
||++.++ .+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 99999999985321 34568999999999899999999999999999999999997
Q ss_pred CCCCCHHHHHH---HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004124 678 IENGSLENWAS---EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 678 ~~~~~~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
........... ...... ....+.... ....+.++.+++.+||+.||++||++.||++.|+++...... .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~---~ 341 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKP---GPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV---S 341 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSC---CCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---C
T ss_pred cCCcCHHHHHHHHHhccCCh---hhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC---C
Confidence 54433322221 111111 111111100 112346789999999999999999999999999998776542 2
Q ss_pred CCCCchHH
Q 004124 755 KLSPLWWA 762 (772)
Q Consensus 755 ~~~~~~~~ 762 (772)
...+..|.
T Consensus 342 ~~~~~dw~ 349 (352)
T 2jii_A 342 PYDPIGLP 349 (352)
T ss_dssp TTSCCCCC
T ss_pred cCccccCc
Confidence 23455553
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=338.25 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=182.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||+|++...... ...+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 81 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLV 81 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTT----CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEE
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc----ccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEE
Confidence 67788999999999999864 6889999998754322 12356889999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 560 FEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
|||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 99998 69999986432 245899999999999999999999988 999999999999999999999999987642
Q ss_pred C---------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCC--C-ccc
Q 004124 636 T---------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP--L-KDI 700 (772)
Q Consensus 636 ~---------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~--~-~~~ 700 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+.. +... . ...
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhhh
Confidence 2 34567999999875 468999999999999999999999996433 2222222221 1000 0 000
Q ss_pred -----cCCcc--------c-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 -----VDPTL--------K-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 -----~d~~l--------~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+.. . ........++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 0 011124567899999999999999999999986
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=344.44 Aligned_cols=243 Identities=17% Similarity=0.292 Sum_probs=198.1
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++++.+|+|+||+||+|+.. +++.+|+|.+..... .....+.+|+++|++++|||||++++++.+.+ ..+
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ 124 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-----LDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMV 124 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEE
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-----hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEE
Confidence 3478889999999999999975 678899988764431 22457899999999999999999999998876 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEccccCccCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNT 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kLsDFGla~~~ 635 (772)
+||||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999999853 2346899999999999999999999998 999999999999974 578999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.............. .
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~~~~-------~ 272 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDE-------D 272 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCCCCS-------S
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCc-------c
Confidence 2 3566799999999999999999999999999999999999643 333344444333221111 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 112345678899999999999999999999863
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=337.26 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=194.5
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcCCC--
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDEP-- 553 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~~~-- 553 (772)
+++++.+|+|+||+||+|+. .+++.||+|++...............+.+|+++++++ +||||+++++++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 47889999999999999995 5688999999875442221112224566777777666 49999999999976542
Q ss_pred -ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 554 -FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 554 -~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
...++||||+. |+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 24689999996 69999997655556999999999999999999999998 999999999999999999999999998
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCCCccc--
Q 004124 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI-- 700 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~-- 700 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+........ ..+....
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChhhccc
Confidence 6432 23567999999999999999999999999999999999996433 22222222211 0100000
Q ss_pred --------cC----CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 --------VD----PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 --------~d----~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .......++..+++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0001112234578899999999999999999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=336.55 Aligned_cols=246 Identities=20% Similarity=0.335 Sum_probs=192.9
Q ss_pred cccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++.+.+|+|+||+||+|+... +..+|+|...... .....+.|.+|+.++++++||||+++++++.++ .
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 89 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---P 89 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---S
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---c
Confidence 3678889999999999998743 4568888765332 233456799999999999999999999998543 4
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp CEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred cEEEEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECcccccccc
Confidence 6899999999999999864 3346899999999999999999999988 999999999999999999999999988643
Q ss_pred CC----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 TA----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ~~----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.. ++..|+|||.+....++.++|||||||++|||++ |+.||..... .+.......+...
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i~~~~~~-------- 236 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGERL-------- 236 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCC--------
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHHHcCCCC--------
Confidence 22 2346999999998999999999999999999997 9999964332 2222222222111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 --PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 12234456788999999999999999999999999988653
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-38 Score=332.20 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=193.4
Q ss_pred ccccccCccceEEEEEEEEcC-C-------cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-G-------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~-------~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~ 552 (772)
++.+.+|+|+||+||+|+... + ..||+|.+.... ....+.|.+|++++++++||||+++++++...+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 677889999999999998653 2 468888875432 223467999999999999999999999998876
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--------E
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--------A 624 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--------~ 624 (772)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +
T Consensus 86 --~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 --ENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp --CCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred --CCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCccccccccee
Confidence 569999999999999999643 344899999999999999999999998 999999999999998877 9
Q ss_pred EEccccCccCCCC-----CCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 625 KISDFSFWNNTTA-----AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 625 kLsDFGla~~~~~-----~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
||+|||++..... ++..|+|||.+.+ ..++.++|||||||++|||+||..|+.... ....... .........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~~~~-~~~~~~~~~ 238 (289)
T 4fvq_A 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQRKLQ-FYEDRHQLP 238 (289)
T ss_dssp EECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHH-HHHTTCCCC
T ss_pred eeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chHHHHH-HhhccCCCC
Confidence 9999999865433 3557999999876 779999999999999999999655543222 2222221 122211111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
. ..+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 239 ~-----------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 239 A-----------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp C-----------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred C-----------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 1134578899999999999999999999999998663
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=368.74 Aligned_cols=241 Identities=19% Similarity=0.305 Sum_probs=198.5
Q ss_pred ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+|+|+||.||+|.+. ++..||||+++.... ....++|.+|+++|++++|||||+++|+|..+ ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEE
Confidence 6899999999999874 456799998865422 22346799999999999999999999999763 4799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---- 637 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~---- 637 (772)
||++|+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 416 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 9999999999863 3456999999999999999999999998 99999999999999999999999999875321
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+....+..+.. ...
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~----------~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKR----------MEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTTCC----------CCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC----------CCC
Confidence 1246999999999999999999999999999998 999996433 2333333333321 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+..++.++.++|.+||+.||++||++.+|++.|+.+...
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 234567899999999999999999999999999987554
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=347.73 Aligned_cols=263 Identities=18% Similarity=0.245 Sum_probs=209.0
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++...+....+
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 3577889999999999999976 4889999998643321 1245688999999999999999999999876544679
Q ss_pred EEEeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEccccCc
Q 004124 558 MVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kLsDFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999996543 234999999999999999999999998 9999999999999 78888999999998
Q ss_pred cCC--------CCCCccccchhhhcc--------CCCCCCCchHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcC
Q 004124 633 NNT--------TAAKTGSAAMELLET--------SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGE 694 (772)
Q Consensus 633 ~~~--------~~~~~~~~aPE~~~~--------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~ 694 (772)
+.. ..++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ....+.+.....+.
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 643 234668999998764 567889999999999999999999996422 23344455555442
Q ss_pred CCC--ccc---cC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 695 QPL--KDI---VD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 695 ~~~--~~~---~d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+. ... .+ +............+.+++.+||+.||++||++.|+++.++++...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 210 000 00 111124467788899999999999999999999999999887654
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=336.74 Aligned_cols=253 Identities=19% Similarity=0.320 Sum_probs=199.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
+++++.+|+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .....
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 37788999999999999996 578899999886532 23456799999999999999999999998732 22257
Q ss_pred EEEEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 557 MMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999998643 3467999999999999999999999998 99999999999999999999999998764
Q ss_pred CCC------------------CCccccchhhhccCC---CCCCCchHHHHHHHHHHHcCCCcccCC---CCCHHHHHHHH
Q 004124 635 TTA------------------AKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIE---NGSLENWASEY 690 (772)
Q Consensus 635 ~~~------------------~~~~~~aPE~~~~~~---~s~ksDVwSfGvvL~ELltG~~P~~~~---~~~~~~~~~~~ 690 (772)
... ++..|+|||.+.... ++.++|||||||++|||++|+.||... .......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---- 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA---- 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH----
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH----
Confidence 321 256799999986543 689999999999999999999999531 1111111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCC
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 752 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 752 (772)
....... ......+.++.+++.+||+.||++||++.|+++.|+.+....+.+.
T Consensus 260 ~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 260 VQNQLSI---------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp HHCC--C---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred hhccCCC---------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 1111100 0112334678999999999999999999999999999877666543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=333.22 Aligned_cols=250 Identities=17% Similarity=0.213 Sum_probs=194.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 78 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTL 78 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEE
Confidence 367888999999999999975 6889999998754322 334567889999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++ ++.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 79 v~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 79 VFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred EEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9999975 66666543 3467999999999999999999999998 9999999999999999999999999986332
Q ss_pred -------CCCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcccc------
Q 004124 637 -------AAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIV------ 701 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~------ 701 (772)
.++..|+|||.+.+.. ++.++|||||||++|||+||..||.... +..+......... .+.....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-SHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-CHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 2355799999987665 8999999999999999999988864332 3333333322210 0000000
Q ss_pred -----------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 -----------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 -----------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........+....++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00111122345678889999999999999999999986
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-38 Score=354.48 Aligned_cols=239 Identities=20% Similarity=0.251 Sum_probs=190.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. +++.||||++...... .......+.+|++++++++|||||++++++...+ ..++
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~l 225 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCF 225 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEE
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh--hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEE
Confidence 377889999999999999964 6889999998643211 1223456889999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999999853 3568999999999999999999997 87 999999999999999999999999998642
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+............
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~----------- 368 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIRF----------- 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCCCC-----------
Confidence 23466899999999999999999999999999999999999543 3344444444433221
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+...+.++.+++.+||+.||++|| +++|+++
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 223446788999999999999999 9999986
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=342.95 Aligned_cols=244 Identities=20% Similarity=0.352 Sum_probs=193.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEE----EEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEI----AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~v----aVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+.. ++..+ ++|.+.... .....+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 90 (327)
T 3lzb_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp EEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS----SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---
T ss_pred eEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---
Confidence 67889999999999999964 44444 555543222 1223467999999999999999999999998754
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|+||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~~~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred ceEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 5899999999999999864 3456899999999999999999999998 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+.. .
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~-~------ 238 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER-L------ 238 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-C------
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC-C------
Confidence 21 2336999999999999999999999999999999 99999643322 22222222211 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 239 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 ---PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1122344678899999999999999999999999998764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=339.71 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=199.6
Q ss_pred cccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||.||+|++ .++..||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 37788999999999999984 367889999886432 23346799999999999999999999998865444
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred eEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEccccccee
Confidence 689999999999999998643 345899999999999999999999988 99999999999999999999999998764
Q ss_pred CC------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH------------HHHHHHH
Q 004124 635 TT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL------------ENWASEY 690 (772)
Q Consensus 635 ~~------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~------------~~~~~~~ 690 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||....... .......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 32 12334899999998899999999999999999999999985321100 0001111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..... ....+..+++++.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 257 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 257 LEEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred hhccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 11100 1112234557889999999999999999999999999998765543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=339.65 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=186.6
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 124 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EIS 124 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEE
Confidence 3477888999999999999976 57889999886432 2356889999999999999999999998876 679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla~~ 634 (772)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 125 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp EEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999999853 456899999999999999999999998 999999999999975 89999999999764
Q ss_pred CC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............. ..+
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~i~~~~~~~---~~~--- 273 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYF---ISP--- 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-HHHHHHHHTTCCCC---CTT---
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-HHHHHHHHhCCCcc---CCc---
Confidence 32 2456799999999999999999999999999999999999644332 22233333322111 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11234567889999999999999999999986
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=334.39 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=194.5
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC--CCCcccceeEEEEcCCC--ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV--NHKNFVNLIGYCEEDEP--FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l--~HpNIV~l~g~~~~~~~--~~ 555 (772)
+++++.+|+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++..... ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 39 IQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred eEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 478899999999999999986 8899999875322 23345555555554 99999999999987632 26
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
.++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. .++|+||||||+|||++.++.+||+||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 7999999999999999953 3589999999999999999999987 223999999999999999999999999
Q ss_pred cCccCC-------------CCCCccccchhhhccCCCCCC------CchHHHHHHHHHHHcC----------CCcccCCC
Q 004124 630 SFWNNT-------------TAAKTGSAAMELLETSAVDLE------SNVYSFGTILFEMITG----------RISYSIEN 680 (772)
Q Consensus 630 Gla~~~-------------~~~~~~~~aPE~~~~~~~s~k------sDVwSfGvvL~ELltG----------~~P~~~~~ 680 (772)
|+++.. ..++..|+|||.+.+..++.+ +|||||||++|||+|| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 987422 235667999999987777766 9999999999999999 66664221
Q ss_pred ---CCHHHHHHHHhhcCCCCccccCCccc--cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 681 ---GSLENWASEYLKGEQPLKDIVDPTLK--SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 681 ---~~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
........ .... .. ..+... .....+++++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 267 ~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 267 PSDPSYEDMRE-IVCI-KK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CSSCCHHHHHH-HHTT-SC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCCchhhhHH-HHhh-hc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 12222221 1111 11 111111 112467889999999999999999999999999999987754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=327.40 Aligned_cols=239 Identities=20% Similarity=0.354 Sum_probs=196.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||+|+.. ++..+|+|++....... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 87 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLI 87 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEE
Confidence 67888999999999999865 56789999886433221 223467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 999999999999853 356899999999999999999999988 999999999999999999999999987533
Q ss_pred ---CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 636 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 636 ---~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+............ +...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~~~~ 230 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFTF-----------PDFV 230 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCC-----------CTTS
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhCCCCC-----------CCcC
Confidence 23456799999999999999999999999999999999999633 3333333333322211 1223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
++++.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 4678899999999999999999999974
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=337.65 Aligned_cols=252 Identities=21% Similarity=0.391 Sum_probs=196.4
Q ss_pred ccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc--
Q 004124 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-- 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~-- 554 (772)
.+.+.+|+|+||+||+|+.. .+..||+|.+...... ....+.+.+|++++++++||||+++++++...+..
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS---QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred eeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc---hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 67788999999999999864 3457999988654322 23456799999999999999999999999875422
Q ss_pred -eEEEEEeccCCCChhhhhhhh----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004124 555 -TRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 555 -~~~LV~Ey~~~GsL~~~L~~~----~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDF 629 (772)
..++||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECTTSCEEECSC
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEEeec
Confidence 359999999999999998532 3356999999999999999999999988 999999999999999999999999
Q ss_pred cCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 630 SFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.......+...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~- 268 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRL- 268 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC-
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHHcCCCC-
Confidence 99864321 2346899999999999999999999999999999 8889864322 2222333322111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+..++.++.+++.+||+.||++||++.++++.|+++....+
T Consensus 269 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 269 ---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1223445678999999999999999999999999999877554
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-38 Score=340.75 Aligned_cols=248 Identities=20% Similarity=0.318 Sum_probs=198.8
Q ss_pred ccccccCccceEEEEEEEEcC-C-----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-G-----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~-----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+... + ..||+|.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH----ADEKEALMSELKIMSHLGQHENIVNLLGACTHGG- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC----hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-
Confidence 677889999999999999643 2 4789998764321 23456799999999999 8999999999998876
Q ss_pred ceEEEEEeccCCCChhhhhhhhc------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.+
T Consensus 124 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 -PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNG 200 (333)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEGG
T ss_pred -ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECCC
Confidence 5699999999999999986432 245899999999999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHH
Q 004124 622 YAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689 (772)
Q Consensus 622 ~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~ 689 (772)
+.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH
Confidence 9999999999864321 1236999999998999999999999999999999 999996443321 1222
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
......... .+...+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 279 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQMA---------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCC---------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 222211100 1122346788999999999999999999999999987653
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=351.10 Aligned_cols=240 Identities=20% Similarity=0.345 Sum_probs=198.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||.||+|+.. +|+.||||++....... ....+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~l 93 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFM 93 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 367788999999999999975 78999999986543211 223467899999999999999999999998876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 94 VMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999985 3456999999999999999999999988 999999999999999999999999997643
Q ss_pred -----CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 -----TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..+ +.++||||+||++|||++|+.||... +.......+..+.... +
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 236 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--HVPTLFKKICDGIFYT-----------P 236 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--SSHHHHHHHHTTCCCC-----------C
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCcCC-----------C
Confidence 234567999999987765 68999999999999999999999643 3334444444332111 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 2234678899999999999999999999873
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=335.61 Aligned_cols=245 Identities=25% Similarity=0.423 Sum_probs=197.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+.. ++.||||.+.... ..+.|.+|++++++++||||+++++++.+.+. ..++||
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 94 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 94 (278)
T ss_dssp EEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred eEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEE
Confidence 67888999999999999875 7889999886432 24579999999999999999999999865432 469999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 172 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeecccccccccccc
Confidence 9999999999997554445899999999999999999999988 9999999999999999999999999876432
Q ss_pred --CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..+.......+.. ...+..++
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~~~~~----------~~~~~~~~ 240 (278)
T 1byg_A 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGYK----------MDAPDGCP 240 (278)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHTTTCC----------CCCCTTCC
T ss_pred CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCC----------CCCcccCC
Confidence 23457999999999999999999999999999999 999996432 2222333222211 11123345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 67889999999999999999999999999987643
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=337.98 Aligned_cols=246 Identities=20% Similarity=0.323 Sum_probs=197.4
Q ss_pred ccccccCccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||+||+|+... +..||||.+.... .......|.+|++++++++||||+++++++...+ .
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 120 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--P 120 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--S
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--C
Confidence 456788999999999998653 2358998876432 2334567999999999999999999999998766 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 121 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 7999999999999999863 3456899999999999999999999998 999999999999999999999999987643
Q ss_pred CC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 636 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~------ 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFRL------ 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCC------
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCcC------
Confidence 21 1235999999998999999999999999999999 99999533 233333333322111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 270 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01123456788999999999999999999999999987654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=332.60 Aligned_cols=246 Identities=17% Similarity=0.254 Sum_probs=199.5
Q ss_pred ccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++.+.+|+|+||.||+|+.. +++.+|+|.+........ .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 90 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DV 90 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EE
Confidence 3578889999999999999975 688999999876543221 1112467999999999999999999999998876 67
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFW 632 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kLsDFGla 632 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999853 456899999999999999999999998 99999999999999887 7999999987
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+............. +
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~----~- 239 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVSYDFD----E- 239 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCC----H-
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcccccC----h-
Confidence 5432 2456799999999999999999999999999999999999643 33333333333221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 240 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 240 --EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111234467889999999999999999999986
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=355.84 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=195.7
Q ss_pred hhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 476 CEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.++| ++++.+|+|+||+||+|+.+ +++.||+|++....... ....+.+.+|.+++.+++|||||++++++.+.+
T Consensus 60 ~~~f-~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-- 134 (412)
T 2vd5_A 60 RDDF-EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--RGEVSCFREERDVLVNGDRRWITQLHFAFQDEN-- 134 (412)
T ss_dssp GGGE-EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--HGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--
T ss_pred hhhE-EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--
Confidence 3444 77889999999999999975 68999999986432111 122345889999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhhee
Confidence 789999999999999999642 346899999999999999999999988 99999999999999999999999999753
Q ss_pred C----------CCCCccccchhhhc-------cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 635 T----------TAAKTGSAAMELLE-------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 635 ~----------~~~~~~~~aPE~~~-------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
. ..++..|+|||.+. ...|+.++|||||||++|||+||+.||... +..+....+.......
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIVHYKEHL 289 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccCc
Confidence 2 24567899999986 457899999999999999999999999643 3333333333211000
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR---PSMRGIAAK 740 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R---Ps~~evl~~ 740 (772)
..+......+.++.+++.+||. +|++| |+++|+++.
T Consensus 290 ------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 ------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0011112345788999999999 99998 589998753
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=331.16 Aligned_cols=247 Identities=18% Similarity=0.287 Sum_probs=201.0
Q ss_pred cccc-ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++ .+|+|+||.||+|+.. .+..||||++.... .....+++.+|++++++++||||+++++++... ..
T Consensus 12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 84 (287)
T 1u59_A 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---AL 84 (287)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SE
T ss_pred hhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc----chhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC---Cc
Confidence 4555 8999999999999854 57789999886542 133456799999999999999999999999543 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999999853 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+.......+...
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~~~------- 232 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRM------- 232 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCCC-------
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCCcC-------
Confidence 12346899999988889999999999999999999 999996433 23333333322111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1223445788999999999999999999999999999866543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=343.77 Aligned_cols=256 Identities=13% Similarity=0.127 Sum_probs=192.3
Q ss_pred cccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhh------hhHHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
+++.+.+|+|+||+||+|+.. .+..+|+|+.......... ......+.+|+..+..++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 467889999999999999975 5678999988654321110 011234778999999999999999999987
Q ss_pred cC--CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC--cEE
Q 004124 550 ED--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY--AAK 625 (772)
Q Consensus 550 ~~--~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~--~~k 625 (772)
.. +....++||||+ +|+|.+++... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSSTTSEE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCCCCcEE
Confidence 72 122689999999 99999998643 37999999999999999999999998 99999999999998877 999
Q ss_pred EccccCccCC----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH-
Q 004124 626 ISDFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS- 688 (772)
Q Consensus 626 LsDFGla~~~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~- 688 (772)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.....+......
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999998532 23566899999999999999999999999999999999999643333222211
Q ss_pred -HHhhcCCCCccccCCccccc--cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 689 -EYLKGEQPLKDIVDPTLKSF--QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 689 -~~~~~~~~~~~~~d~~l~~~--~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...... .. ..+... ....+.++.+++.+||+.||++||++.+|++.|+++..
T Consensus 274 ~~~~~~~--~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDE--LP----QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHT--TT----HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhccc--cc----HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111110 10 000000 01345689999999999999999999999999988654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=332.56 Aligned_cols=245 Identities=21% Similarity=0.349 Sum_probs=202.4
Q ss_pred ccccccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||+|+... +..||+|.+.... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 16 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 87 (288)
T 3kfa_A 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 87 (288)
T ss_dssp EEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEE
Confidence 677889999999999999764 7889999886432 23467999999999999999999999998776 57999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~- 638 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999997655667999999999999999999999988 999999999999999999999999998654321
Q ss_pred ---------CccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 639 ---------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 639 ---------~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
+..|+|||.+.+..++.++||||||+++|||++ |+.||..... ............. ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~~~----------~~ 233 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRM----------ER 233 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC----------CC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccCCC----------CC
Confidence 235899999998999999999999999999999 9999964332 2222222221110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+..+++++.+++.+||+.||++||++.|+++.|+.+...
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999887653
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=357.98 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=199.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ......+.+|+++|.+++|||||++++++.+.+ ..++|
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 262 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLV 262 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEE
Confidence 67788999999999999975 68999999986543221 223456889999999999999999999998877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999987544456999999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+........... ++
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~-----------~p 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE-----------YS 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC-----------CC
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc-----------CC
Confidence 2356679999999988999999999999999999999999975432 223333333222111 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
...+.++.+|+.+||+.||++|| ++.||++
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 33456789999999999999999 7888875
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=330.54 Aligned_cols=252 Identities=16% Similarity=0.209 Sum_probs=197.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 111 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYV 111 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc--CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEE
Confidence 377888999999999999975 6788999988644322 2334578999999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999864 346899999999999999999999998 9999999999999999999999999875332
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||..... ...........+.. ...
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~-------~~~ 257 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---SVMGAHINQAIPRP-------STV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---HHHHHHHHSCCCCG-------GGT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---HHHHHHhccCCCCc-------ccc
Confidence 245579999999989999999999999999999999999964321 22222232222111 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhhhcCC
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 749 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 749 (772)
....+.++.+++.+||+.||++|| +++++++.|+.......
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 233456788999999999999999 99999999998755443
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=327.73 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=199.5
Q ss_pred ccccccCccceEEEEEEEEcC-C---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.+ + ..+|+|.+.... .....+.|.+|++++++++||||+++++++.+.+. ..
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 98 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT----EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LP 98 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc----cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-Cc
Confidence 345778999999999998643 2 268888775322 12345689999999999999999999999986653 34
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 99 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 899999999999999863 3456899999999999999999999998 9999999999999999999999999986321
Q ss_pred -------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 -------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 -------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.++..|+|||.+.+..++.++|||||||++|||+||..|+.... +..+.......+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~------- 247 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRL------- 247 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCC-------
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCC-------
Confidence 12346899999999999999999999999999999666653222 222222222222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGAT 753 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 753 (772)
..+...++++.+++.+||+.||++|||+.|+++.|+++.........
T Consensus 248 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 248 ---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred ---CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 11223346788999999999999999999999999999887655443
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=334.48 Aligned_cols=264 Identities=14% Similarity=0.197 Sum_probs=202.2
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+. .+++.||||+...... ..++.+|++++.+++|++++..++++...+. ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~l 82 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 82 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-------chHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEE
Confidence 47788999999999999996 5788999998654332 1357889999999999998888887754332 5799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~~ 635 (772)
||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99999 9999999863 3456999999999999999999999998 9999999999999 78899999999987532
Q ss_pred ----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCCc
Q 004124 636 ----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLK 698 (772)
Q Consensus 636 ----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~~ 698 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 235 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--- 235 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH---
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc---
Confidence 23456789999999999999999999999999999999999743211 1111111110000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
...........++++.+++.+||+.||++||++.++++.|+++...... +...+..|+.+
T Consensus 236 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 4hgt_A 236 ---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp ---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC---CTTCCCGGGGC
T ss_pred ---cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC---CccCccchhhc
Confidence 0000011122356899999999999999999999999999998775432 23345667654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=336.49 Aligned_cols=246 Identities=21% Similarity=0.332 Sum_probs=200.5
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|+.. .+..||+|.+..... ......|.+|++++++++||||+++++++.+.+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 101 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 101 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC----HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC----HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--
Confidence 67788999999999999864 367899998864321 233467999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCCeEEE
Confidence 5699999999999999986432 145789999999999999999999998 999999999999999999999
Q ss_pred ccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+.
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~ 257 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGG 257 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTTC
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcCC
Confidence 99999864321 2345999999999999999999999999999999 88898533 3333333333321
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. ...+..++.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 258 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 258 L----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred c----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 11123345678899999999999999999999999988644
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=328.52 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=196.5
Q ss_pred ccccccCccceEEEEEEEEcCC----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+.... ..+++|.+.... .....+.+.+|++++++++||||+++++++...+. ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 102 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 102 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CC
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC----CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ce
Confidence 6778899999999999986432 347777765322 12345679999999999999999999999765443 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 103 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECccccccccc
Confidence 899999999999999963 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred C-------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcC-CCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 637 A-------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITG-RISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 637 ~-------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
. ++..|+|||.+.+..++.++||||||+++|||+|| ..||..... .+.......+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~----- 252 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRLL----- 252 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTTCCCC-----
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcCCCCC-----
Confidence 1 22358999999999999999999999999999995 555543222 12222222221111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
.+..++.++.+++.+||+.||++||++.|+++.|+++......
T Consensus 253 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1122346788999999999999999999999999998876554
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=339.49 Aligned_cols=240 Identities=19% Similarity=0.248 Sum_probs=191.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+++.. +++.||||++...... .+.+.+|+.++++++|||||++++++...+ ..++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 93 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI------DENVQREIINHRSLRHPNIVRFKEVILTPT--HLAI 93 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS------CHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEE
Confidence 478889999999999999976 7889999988643321 246889999999999999999999999877 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--EEEccccCccCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFSFWNNT- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--~kLsDFGla~~~- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 94 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 94 IMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999999999853 346899999999999999999999998 999999999999987765 999999988632
Q ss_pred -------CCCCccccchhhhccCCCCCC-CchHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcCCCCccccCCcc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLE-SNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~k-sDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
..++..|+|||.+.+..++.+ +|||||||++|||++|+.||.... ...................
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 243 (361)
T 3uc3_A 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD------ 243 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT------
T ss_pred ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC------
Confidence 235668999999988887655 899999999999999999997432 2333444443332221111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01234678899999999999999999999865
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=336.44 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=190.2
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHH--HHHHHhcCCCCcccceeEEEEc---CCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK--KIDTLSKVNHKNFVNLIGYCEE---DEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~--Ei~~L~~l~HpNIV~l~g~~~~---~~~~~ 555 (772)
++++.+|+|+||+||+|+. +++.||||++.... ...+.. |+..+..++||||+++++++.. .+...
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred heeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 6788999999999999987 57899999886432 123334 4444556899999999986643 22224
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-------TPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-------~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
.++||||+++|+|.+++.. ...++..+..|+.|++.||+|||+. .++|+||||||+|||++.++.+||+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 6899999999999999853 3358999999999999999999998 11399999999999999999999999
Q ss_pred ccCccCCC-----------------CCCccccchhhhcc-------CCCCCCCchHHHHHHHHHHHcCCCcccCCCC---
Q 004124 629 FSFWNNTT-----------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMITGRISYSIENG--- 681 (772)
Q Consensus 629 FGla~~~~-----------------~~~~~~~aPE~~~~-------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--- 681 (772)
||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99985322 25568999999876 4566789999999999999999887643211
Q ss_pred -------------CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 682 -------------SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 682 -------------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
....+ ........ ....+... .......+.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDM-QVLVSREK-QRPKFPEA-WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCTTHHHHCSSCCHHHH-HHHHTTSC-CCCCCCTT-CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHhhhcccCCCchHHHH-Hhhhcccc-cCCCCCcc-cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 01111 11111111 00011111 1112346778999999999999999999999999999998765
Q ss_pred CCC
Q 004124 749 PDG 751 (772)
Q Consensus 749 ~~~ 751 (772)
...
T Consensus 321 ~~~ 323 (336)
T 3g2f_A 321 ERN 323 (336)
T ss_dssp CC-
T ss_pred Hhc
Confidence 543
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=331.85 Aligned_cols=264 Identities=14% Similarity=0.196 Sum_probs=203.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+. .+++.||||++...... +++.+|++++.+++|++++..++++...+. ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~l 82 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 82 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-------CHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEE
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-------hHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEE
Confidence 36788899999999999996 57889999987654321 358899999999999998888877654432 5799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~~ 635 (772)
||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999 9999999863 3456999999999999999999999998 9999999999999 48899999999987532
Q ss_pred ----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCc
Q 004124 636 ----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLK 698 (772)
Q Consensus 636 ----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~ 698 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 235 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--- 235 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH---
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc---
Confidence 2345579999999999999999999999999999999999974321 11111111111000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
..........+++++.+++.+||+.||++||++.||++.|+++...... +...+..|..+
T Consensus 236 ---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 3uzp_A 236 ---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp ---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC---CSSCCCGGGGC
T ss_pred ---CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC---ccccccccccc
Confidence 0000111123456789999999999999999999999999998775533 23445677653
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=327.76 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=195.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
+++...+|+|+||+||+|... ++..||+|.+..... .....+.+.+|++++++++||||+++++++... +....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 366778999999999999864 677899988765432 233457899999999999999999999998652 22357
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~~~ 635 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+++|+||||||+|||++ +++.+||+|||++...
T Consensus 105 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999999853 3568999999999999999999999877899999999999997 7899999999987533
Q ss_pred C-------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 T-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ~-------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. .++..|+|||.+. ..++.++||||+||++|||+||+.||... ............+..+. ..
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~---------~~ 251 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SF 251 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GG
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc-CcHHHHHHHHhccCCcc---------cc
Confidence 2 2456799999876 46999999999999999999999999643 23333333333321110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2223457889999999999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=328.79 Aligned_cols=239 Identities=19% Similarity=0.314 Sum_probs=178.7
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 89 (278)
T 3cok_A 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLV 89 (278)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--hhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEE
Confidence 6778899999999999996 578899999986432211 222467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999863 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||...... +....... ... ..+.
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~----------~~~-~~~~ 233 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNKVVL----------ADY-EMPS 233 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CCS----------SCC-CCCT
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHHHhh----------ccc-CCcc
Confidence 2455789999998889999999999999999999999999643321 11111100 000 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+.++.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 34567889999999999999999999975
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=328.87 Aligned_cols=246 Identities=18% Similarity=0.331 Sum_probs=197.4
Q ss_pred ccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+... +..||+|.+.... .....+.|.+|++++++++||||+++++++.++. .
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 87 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC----TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---T 87 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS----CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS---C
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc----CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC---C
Confidence 667888999999999998643 2358888876432 1234578999999999999999999999987543 4
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 899999999999999864 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 ----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +.......+...
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~--------- 233 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRL--------- 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCC---------
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCC---------
Confidence 12346999999998999999999999999999999 99999643221 122222222111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..+++++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 234 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 234 -PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 011223467889999999999999999999999999886643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=367.66 Aligned_cols=241 Identities=21% Similarity=0.333 Sum_probs=197.1
Q ss_pred cccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+.+|+|+||+||+|.+. .++.||||+++..... ....++|.+|+++|++++|||||+++++|... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND---PALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC---GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEE
Confidence 36899999999999763 4578999988654321 23356899999999999999999999999754 368999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
|||++|+|.+++. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 449 E~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 449 EMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp ECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred EccCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 9999999999995 3456899999999999999999999998 99999999999999999999999998763321
Q ss_pred ---------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ---------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+... .
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~----------~ 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM----------G 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------C
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------C
Confidence 1245999999999999999999999999999999 99999643 233333333332211 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+..++.++.++|.+||+.||++||++.+|++.|+++..
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 223455789999999999999999999999999998653
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=329.11 Aligned_cols=241 Identities=17% Similarity=0.296 Sum_probs=197.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED-------- 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~-------- 551 (772)
++++.+|+|+||.||+|+.. +++.||+|.+.... +.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 67788999999999999976 78999999886432 2467899999999999999999988641
Q ss_pred ------CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004124 552 ------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 552 ------~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCEE
Confidence 1124699999999999999997655677999999999999999999999998 99999999999999999999
Q ss_pred EccccCccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 626 ISDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 626 LsDFGla~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||..|+... ..+......+ ..
T Consensus 163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~--~~ 236 (284)
T 2a19_B 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDG--II 236 (284)
T ss_dssp ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHTT--CC
T ss_pred ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhcc--cc
Confidence 99999875432 2456799999999999999999999999999999999887421 1222222111 11
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
. ...+.++.+++.+||+.||++||++.|+++.|..+.+...
T Consensus 237 ~-----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 S-----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp C-----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred c-----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1 1233567889999999999999999999999999876544
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=338.75 Aligned_cols=247 Identities=20% Similarity=0.245 Sum_probs=193.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-----CCcccceeEEEEcCCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----HpNIV~l~g~~~~~~~ 553 (772)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+..|++++.+++ |||||++++++...+
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~- 109 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD- 109 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT-
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC-
Confidence 47889999999999999997 46788999988532 223456788999999986 999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------------
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------------- 620 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~------------- 620 (772)
..++||||+ +|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 110 -~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 110 -HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp -EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred -eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchhcc
Confidence 789999999 999999997655567999999999999999999999998 999999999999986
Q ss_pred ------------CCcEEEccccCccCCC------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC
Q 004124 621 ------------DYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS 682 (772)
Q Consensus 621 ------------~~~~kLsDFGla~~~~------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~ 682 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-- 263 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE-- 263 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--
T ss_pred cccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc--
Confidence 7899999999986432 34668999999999999999999999999999999999996432
Q ss_pred HHHHHHHHhhcCCCCcc-------------ccC--------Ccc--------------ccccHHHHHHHHHHHHHcccCC
Q 004124 683 LENWASEYLKGEQPLKD-------------IVD--------PTL--------------KSFQENVLEELLVVIKNCVHPD 727 (772)
Q Consensus 683 ~~~~~~~~~~~~~~~~~-------------~~d--------~~l--------------~~~~~~~~~~l~~Li~~Cl~~d 727 (772)
..+..........+... .++ +.. ........+.+.+|+.+||+.|
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 343 (360)
T 3llt_A 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343 (360)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCC
Confidence 22222211111111100 000 000 0000011256789999999999
Q ss_pred CCCCCCHHHHHH
Q 004124 728 PKQRPSMRGIAA 739 (772)
Q Consensus 728 P~~RPs~~evl~ 739 (772)
|++|||+.|+++
T Consensus 344 P~~Rpta~elL~ 355 (360)
T 3llt_A 344 PTLRPSPAELLK 355 (360)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999875
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=331.43 Aligned_cols=252 Identities=21% Similarity=0.298 Sum_probs=194.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 79 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED---DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHL 79 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc---chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEE
Confidence 367889999999999999975 588999998865432 2334567899999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 80 v~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 80 VFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp EEECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999988874 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhc-----------CCC
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKG-----------EQP 696 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~-----------~~~ 696 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ......... ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 24557899999865 6789999999999999999999999964332111 111111100 000
Q ss_pred Cc--cccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 LK--DIVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 ~~--~~~d~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. ...++. .....+..+.++.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000110 000112345678999999999999999999999863
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=330.70 Aligned_cols=242 Identities=22% Similarity=0.319 Sum_probs=190.5
Q ss_pred cccc-cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceE
Q 004124 480 SNII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~ii-g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++ +.+|+|+||+||+|+. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~ 86 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RF 86 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EE
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EE
Confidence 3554 5689999999999995 4788999999865432 2245789999999985 7999999999999877 68
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCcc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWN 633 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kLsDFGla~ 633 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 87 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999999864 356899999999999999999999998 999999999999988765 9999999875
Q ss_pred CCC----------------CCCccccchhhhcc-----CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH---------
Q 004124 634 NTT----------------AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGSL--------- 683 (772)
Q Consensus 634 ~~~----------------~~~~~~~aPE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--------- 683 (772)
... .++..|+|||.+.. ..++.++|||||||++|||+||+.||.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 321 25567999999864 568899999999999999999999997543211
Q ss_pred ----HHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 684 ----ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 684 ----~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.........+...... ......+.++.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPD-------KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCH-------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCc-------hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1122222222111100 000123567899999999999999999999987
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=329.70 Aligned_cols=245 Identities=21% Similarity=0.324 Sum_probs=196.8
Q ss_pred cccc-ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+ .+|+|+||+||+|.+. .++.||||++..... .....++|.+|++++++++||||+++++++.. + ..
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~ 92 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SW 92 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--Cc
Confidence 5556 7899999999999653 457899998865432 13345689999999999999999999999943 3 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 899999999999999863 456899999999999999999999998 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+...
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~------- 239 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM------- 239 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-------
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-------
Confidence 1 2245899999988889999999999999999999 99999643 223333333222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 240 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 12234457789999999999999999999999999987554
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=331.64 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=201.0
Q ss_pred cccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+++.+.+|+|+||+||+|+. .+++.||||.+..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC----cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 37788999999999999984 3457899998864321 23446799999999999 7999999999998754
Q ss_pred CceEEEEEeccCCCChhhhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 618 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl 618 (772)
. ..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 105 ~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 G-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL 181 (316)
T ss_dssp S-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred C-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEE
Confidence 3 36999999999999999964322 12889999999999999999999988 9999999999999
Q ss_pred CCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHH
Q 004124 619 TEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 686 (772)
Q Consensus 619 d~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~ 686 (772)
+.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... ...
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~ 260 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEF 260 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHH
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHH
Confidence 9999999999999864322 1235999999999999999999999999999999 99999654332 222
Q ss_pred HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 687 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
......+... ..+...+.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 261 ~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CRRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCccC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 2222222111 011223467889999999999999999999999999987643
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=322.59 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=197.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|... ++..||+|++...... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 82 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 82 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEE
Confidence 377889999999999999965 5789999998754322 334567899999999999999999999998776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 83 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999999988854 356899999999999999999999998 999999999999986655 999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...........+..... .+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~---~~~--- 230 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYP---SPE--- 230 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---TTT---
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCC---chh---
Confidence 23456799999999999999999999999999999999999643 33333433333322111 111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++++.+++.+||+.||++|||+.|+++.
T Consensus 231 -~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 -WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 12334678899999999999999999999873
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=337.22 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=198.3
Q ss_pred cccccccCccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||.||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 37788999999999999984 367899999886432 23356799999999999999999999998765433
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 56899999999999999864 3356899999999999999999999988 99999999999999999999999998764
Q ss_pred CCC------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-------------HHHHH
Q 004124 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-------------NWASE 689 (772)
Q Consensus 635 ~~~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-------------~~~~~ 689 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||+.|+........ .....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 321 23358999999888899999999999999999999998852110000 00111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+.... ....+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 275 ~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111110 0112234557889999999999999999999999999998653
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=322.48 Aligned_cols=239 Identities=18% Similarity=0.249 Sum_probs=194.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. ++..+|+|++...... ..+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYL 83 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEE
Confidence 477888999999999999975 4678999988654322 2457899999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 84 VMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999998854 355899999999999999999999998 9999999999999 78899999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+ .++.++||||||+++|||+||+.||... ...+.......+.......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~------- 229 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPEK------- 229 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHH-------
T ss_pred cCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCch-------
Confidence 234567999998865 4899999999999999999999999643 3333344443332211100
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00123567889999999999999999999985
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=335.42 Aligned_cols=240 Identities=22% Similarity=0.310 Sum_probs=192.1
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC--CcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|...+++.||||++...... ....+.+.+|++++.+++| |||+++++++...+ ..+
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 85 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 85 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc---hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEE
Confidence 4788999999999999999988999999998754322 3345679999999999976 99999999999877 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
+|||| .+|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 86 lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99995 58899999863 456899999999999999999999998 99999999999997 578999999998643
Q ss_pred ---------CCCCccccchhhhcc-----------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 636 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 ---------~~~~~~~~aPE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||......... .........
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~~ 238 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-LHAIIDPNH 238 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-HHHHHCTTS
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH-HHHHhcCCc
Confidence 235678999999864 67889999999999999999999999643322222 222222111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~---------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 239 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 10 1112223578899999999999999999999865
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=336.95 Aligned_cols=249 Identities=18% Similarity=0.292 Sum_probs=186.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcC------C
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEED------E 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~------~ 552 (772)
++.+.+|+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.++. ||||+++++++... .
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 67889999999999999964 68899999885442 233467899999999996 99999999998521 2
Q ss_pred CceEEEEEeccCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGl 631 (772)
....++||||+. |+|.+++... ....+++..+..|+.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 224799999995 7999988643 34569999999999999999999999887899999999999999999999999999
Q ss_pred ccCCCC---------------------CCccccchhhh---ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHH
Q 004124 632 WNNTTA---------------------AKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 687 (772)
Q Consensus 632 a~~~~~---------------------~~~~~~aPE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~ 687 (772)
++.... ++..|+|||.+ ....++.++|||||||++|||+||+.||..... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~ 262 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRIV 262 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHhh
Confidence 865322 45569999998 566788999999999999999999999953221 1111
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
.+..... .......++.+++.+||+.||++||++.|+++.|+.+.+....
T Consensus 263 ----~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 263 ----NGKYSIP---------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -------CCCC---------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ----cCcccCC---------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 1100000 0111224577899999999999999999999999999876543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=336.24 Aligned_cols=249 Identities=25% Similarity=0.435 Sum_probs=199.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEE--EEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEI--AVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~v--aVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|+.. ++..+ ++|.+..... ....+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~ 101 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS----KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 101 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EE
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeeccccc----hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ce
Confidence 67788999999999999964 45544 7777653221 22345789999999999 9999999999998877 68
Q ss_pred EEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCCC
Confidence 99999999999999986432 246899999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004124 623 AAKISDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 623 ~~kLsDFGla~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~ 257 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQG 257 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHGGGT
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHHHhhcC
Confidence 99999999876321 23456999999988889999999999999999998 99999533 333333332222
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
... ..+...+.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 258 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 110 1122344678899999999999999999999999999876543
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=331.20 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=187.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.||||++...... .....++..|+..+.++ +|||||+++++|.+.+ ..+
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~ 133 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILY 133 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEE
Confidence 377889999999999999976 7899999987543322 22334556666666655 9999999999999877 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
+||||+ +|+|.+++... ...++|..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999999 77999888643 456999999999999999999999988 999999999999999999999999987533
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+ .++.++|||||||++|||++|..|+... ..+ .....+. .. ..+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~-~~~~~~~------~~---~~~~ 274 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGW-QQLRQGY------LP---PEFT 274 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHH-HHHTTTC------CC---HHHH
T ss_pred CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHH-HHHhccC------CC---cccc
Confidence 234668999998875 7999999999999999999997766421 111 1111111 00 1122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++++.+++.+||+.||++|||+.|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 334578899999999999999999999986
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=353.41 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=196.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ......+.+|++++.+++|||||++++++...+ ..++|
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 263 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLV 263 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEE
Confidence 56778999999999999975 68999999986543221 122457889999999999999999999998876 68999
Q ss_pred EeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 560 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999986432 446999999999999999999999998 999999999999999999999999998532
Q ss_pred -------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCccc
Q 004124 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~---------- 411 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT---------- 411 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC----------
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC----------
Confidence 2456689999999999999999999999999999999999975432 334444444433221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 412 -~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 -YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 223345678899999999999999975
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=325.66 Aligned_cols=241 Identities=19% Similarity=0.285 Sum_probs=193.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||+||+|+.. ++..+|+|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 97 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYI 97 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEE
Confidence 367888999999999999964 6788999988654321 22467899999999999999999999998776 6799
Q ss_pred EEeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCcc
Q 004124 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~ 633 (772)
||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999998643 3467999999999999999999999998 9999999999999 456889999999986
Q ss_pred CC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. ..++..|+|||.+. ..++.++|||||||++|||++|+.||... ...+...............
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~----- 247 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVE----- 247 (285)
T ss_dssp C----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCC------
T ss_pred ecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccccc-----
Confidence 42 23456799999875 56899999999999999999999999643 3333333333222211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++++.+++.+||+.||++|||+.|+++
T Consensus 248 ---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0113467889999999999999999999985
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=328.79 Aligned_cols=247 Identities=18% Similarity=0.262 Sum_probs=197.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+++|.+...... ....+.+.+|++++++++||||+++++++.+......++|
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred eeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 67888999999999999975 6888999988754322 3345679999999999999999999998865433368999
Q ss_pred EeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCC---CCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 560 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLT---PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~---~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999999986532 345999999999999999999999865 3499999999999999999999999998764
Q ss_pred CC---------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 635 TT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~~---------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. .++..|+|||.+.+..++.++||||||+++|||+||+.||... +..+.......+..+
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~--------- 234 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR--------- 234 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC---------
T ss_pred eccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccc---------
Confidence 32 2455799999999889999999999999999999999999643 233333333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
..+...+.++.+++.+||+.||++||++.|+++.+.
T Consensus 235 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 -RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 112234567899999999999999999999997543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=323.62 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=202.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.+|+|.+........ .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 477889999999999999976 688999998876543221 1112467999999999999999999999998876 679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCcc
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFWN 633 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kLsDFGla~ 633 (772)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999853 356899999999999999999999988 99999999999998877 89999999876
Q ss_pred CCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .++..|+|||.+.+..++.++||||||+++|||+||+.||.... ..+.............
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~------- 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAVNYDFD------- 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTTCCCCC-------
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--hHHHHHHhHhcccCCc-------
Confidence 432 24567999999998999999999999999999999999996432 3333333322211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhhc
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA--KLKEITAM 747 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~--~L~~i~~~ 747 (772)
.......+.++.+++.+||+.||++||++.|+++ .++.+...
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0111233567889999999999999999999997 35555544
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=329.25 Aligned_cols=237 Identities=16% Similarity=0.256 Sum_probs=191.0
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|.+...... .....++.+|+..+.++ +||||+++++++.+.+ ..++
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~l 88 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLI 88 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEE
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEE
Confidence 67889999999999999976 7899999988754322 22356788999999999 9999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC----------------
Q 004124 559 VFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---------------- 620 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---------------- 620 (772)
||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC-----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999997542 266899999999999999999999998 999999999999984
Q ss_pred ---CCcEEEccccCccCCC-----CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh
Q 004124 621 ---DYAAKISDFSFWNNTT-----AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691 (772)
Q Consensus 621 ---~~~~kLsDFGla~~~~-----~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~ 691 (772)
...+||+|||++.... .++..|+|||.+.+. .++.++|||||||++|||++|+.++... . . .....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~--~-~~~~~ 241 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--D--Q-WHEIR 241 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--H--H-HHHHH
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--h--H-HHHHH
Confidence 4479999999876432 356679999998765 5668999999999999999998776322 1 1 11122
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+.. ...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 242 QGRL----------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp TTCC----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCC----------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 2111 1122234567889999999999999999999986
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=326.06 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=197.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||+||+|+.. +++.+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~l 92 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC--HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEE
Confidence 367788999999999999976 56788999876543222 334567999999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999998753 356899999999999999999999998 9999999999999999999999999875432
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||... ...+............ +
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~ 235 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYSI-----------P 235 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCC-----------C
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhhccCCC-----------c
Confidence 2455699999999888999999999999999999999999643 3333333333322111 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2234678899999999999999999999874
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=343.47 Aligned_cols=238 Identities=18% Similarity=0.298 Sum_probs=185.4
Q ss_pred cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc-CCCCcccceeEEEEc--CCCceEEEE
Q 004124 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK-VNHKNFVNLIGYCEE--DEPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~-l~HpNIV~l~g~~~~--~~~~~~~LV 559 (772)
+.+|.|+||+||+|+.. +++.||||++... ..+.+|++++.+ .+|||||++++++.. .+....++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 57899999999999965 6788999988521 246788888744 589999999998864 222257999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccCCC
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNTT 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla~~~~ 636 (772)
|||+++|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999997544557999999999999999999999988 999999999999997 7899999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||....... .........+..... .+.
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~---~~~-- 290 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---NPE-- 290 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC---TTT--
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC---Ccc--
Confidence 23567999999999999999999999999999999999997433211 111122222211111 011
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...++.++.+|+.+||+.||++|||+.|+++.
T Consensus 291 --~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 --WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12345678999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=329.95 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=192.4
Q ss_pred ccccccCccceEEEEEEEEc--CCc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS--SGV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~--~~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|+|+||+||+|++. ++. .||||.+...... .....+.+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~ 95 (291)
T 1u46_A 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---M 95 (291)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---C
T ss_pred eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---c
Confidence 67889999999999999864 233 5788877643221 1234568999999999999999999999998754 5
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999998643 345899999999999999999999998 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||... +..+.............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~----- 245 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERLP----- 245 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCCC-----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCCC-----
Confidence 1 2235899999988889999999999999999999 99999533 33444444433321111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.+..++.++.+++.+||+.||++||++.++++.|+++....
T Consensus 246 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 ----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 12234567899999999999999999999999999876543
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=333.09 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=197.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||.||+++.. +++.+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 118 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 118 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEE
Confidence 367788999999999999975 46788999876543222 334567999999999999999999999999876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998853 356899999999999999999999998 9999999999999999999999999976432
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+............ +
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~-----------~ 261 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYSI-----------P 261 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCC-----------C
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHhcCCCCC-----------C
Confidence 2455799999999889999999999999999999999999643 3333333333332211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++||++.|+++.
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2234578889999999999999999999874
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=335.56 Aligned_cols=235 Identities=25% Similarity=0.384 Sum_probs=178.2
Q ss_pred cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEEEe
Q 004124 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+.+|+|+||+||+|+.. +++.||||++... ....+.+|++++.+++ |||||++++++.+.+ ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 56889999999999975 6889999988532 1356789999999997 999999999998876 6799999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEEccccCccCCC--
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKISDFSFWNNTT-- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kLsDFGla~~~~-- 636 (772)
|+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 87 LLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred ccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999999863 457999999999999999999999998 99999999999997655 89999999986332
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-----CHHHHHHHHhhcCCCCccccCCc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-----SLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ...+.......+.....
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~------ 236 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE------ 236 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC------
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC------
Confidence 235578999999999999999999999999999999999974332 22333333333321110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......++++.+++.+||+.||++|||+.|+++
T Consensus 237 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 -GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0111234578899999999999999999999875
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=323.69 Aligned_cols=239 Identities=18% Similarity=0.321 Sum_probs=196.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+.. ++..+|+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 92 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLM 92 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEE
Confidence 67888999999999999975 56789999876432211 222467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998643 46899999999999999999999988 999999999999999999999999987432
Q ss_pred ---CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 636 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 636 ---~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+........... ++...
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~-----------~~~~~ 235 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRRIVNVDLK-----------FPPFL 235 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCC-----------CCTTS
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--CHhHHHHHHhccccC-----------CCCcC
Confidence 23456799999999999999999999999999999999999643 233333333332211 12234
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.++.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 4678899999999999999999999863
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=342.39 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=185.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|.. .+++.||||++...... ....+++.+|+.++.++. |||||++++++...+....+
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN---STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 47889999999999999986 46889999988543211 233467889999999997 99999999999865544679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
+|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 88 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 9999997 689888853 46899999999999999999999998 9999999999999999999999999986431
Q ss_pred -----------------------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHH
Q 004124 637 -----------------------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 686 (772)
Q Consensus 637 -----------------------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~ 686 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~ 239 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS--TMNQ 239 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--HHHH
Confidence 34567999999876 679999999999999999999999996432 2222
Q ss_pred HHHHhhc-CCCCcccc----CC------------------cccccc-------------HHHHHHHHHHHHHcccCCCCC
Q 004124 687 ASEYLKG-EQPLKDIV----DP------------------TLKSFQ-------------ENVLEELLVVIKNCVHPDPKQ 730 (772)
Q Consensus 687 ~~~~~~~-~~~~~~~~----d~------------------~l~~~~-------------~~~~~~l~~Li~~Cl~~dP~~ 730 (772)
...+... ..+..+.+ .+ ...... ..+.+++.+|+.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 2222110 00100000 00 000000 023467899999999999999
Q ss_pred CCCHHHHHHH
Q 004124 731 RPSMRGIAAK 740 (772)
Q Consensus 731 RPs~~evl~~ 740 (772)
|||+.|+++.
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999875
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=336.08 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=197.3
Q ss_pred cccccccCccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
+++++.+|+|+||.||+|++ .++..||||.+.... ......++.+|+.++++++||||+++++++...+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 106 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 106 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc----chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-
Confidence 47788999999999999984 356789999886332 1334567999999999999999999999998876
Q ss_pred ceEEEEEeccCCCChhhhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEE
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAK 625 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~-----~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~k 625 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. +..+|
T Consensus 107 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 -PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEE
T ss_pred -CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceEE
Confidence 56999999999999999975432 45899999999999999999999998 999999999999984 45699
Q ss_pred EccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004124 626 ISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 626 LsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcC
Confidence 9999986421 123446999999988999999999999999999999 99999533 333333333332
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
... ..+..++.++.+++.+||+.||++||++.|+++.|+.+...
T Consensus 262 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 GRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111 11223446788999999999999999999999999987653
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=324.47 Aligned_cols=241 Identities=17% Similarity=0.259 Sum_probs=196.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+++.+|+|+||+||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYL 83 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEE
Confidence 367888999999999999975 688999999875331 12356889999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999999853 346899999999999999999999998 9999999999999 78899999999998654
Q ss_pred CC-------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 TA-------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ~~-------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+.......+...... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 230 (304)
T 2jam_A 160 QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFES-------PF 230 (304)
T ss_dssp CCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCT-------TT
T ss_pred CCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCc-------cc
Confidence 33 456799999999889999999999999999999999999643 333344444433221111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12345678899999999999999999999863
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=346.93 Aligned_cols=237 Identities=11% Similarity=0.156 Sum_probs=184.5
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHH---HHHhcCCCCccccee-------EEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKI---DTLSKVNHKNFVNLI-------GYC 548 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei---~~L~~l~HpNIV~l~-------g~~ 548 (772)
+++.+.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+ +++++++|||||+++ +++
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 36778899999999999995 568999999987543222 23456799999 556666899999999 666
Q ss_pred EcCCC---------------ceEEEEEeccCCCChhhhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004124 549 EEDEP---------------FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 608 (772)
Q Consensus 549 ~~~~~---------------~~~~LV~Ey~~~GsL~~~L~~~~~-----~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvH 608 (772)
...+. ...++||||+ +|+|.+++..... ..++|..+..|+.||+.||+|||+.+ |+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH 229 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVH 229 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EEC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--eec
Confidence 65421 0268999999 6899999974321 12446888899999999999999998 999
Q ss_pred eCCCCCCeEECCCCcEEEccccCccCC------CCCCccccchhhhccC-----------CCCCCCchHHHHHHHHHHHc
Q 004124 609 RNLQSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELLETS-----------AVDLESNVYSFGTILFEMIT 671 (772)
Q Consensus 609 rDLKp~NILld~~~~~kLsDFGla~~~------~~~~~~~~aPE~~~~~-----------~~s~ksDVwSfGvvL~ELlt 671 (772)
|||||+|||++.++.+||+|||+++.. ..+ ..|+|||.+.+. .++.++|||||||++|||+|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 999999999999999999999998643 234 789999999877 89999999999999999999
Q ss_pred CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 672 GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 672 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
|+.||...... .....+.. .....++++.+++.+||+.||++||++.|+++
T Consensus 309 g~~Pf~~~~~~------------~~~~~~~~-----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAAL------------GGSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------------------CCSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCcccccc------------cchhhhhh-----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999532210 11111111 11233467889999999999999999999986
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=330.24 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=198.1
Q ss_pred cccccc-cccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCc
Q 004124 478 DFSNII-GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 478 ~f~~ii-g~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
+++.+. +.+|+|+||+||+|+.. +++.||+|++...... ......+.+|+.++.++ +||||+++++++...+
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~-- 102 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG---QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS-- 102 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT---EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--
Confidence 444555 77999999999999975 6889999988754322 22346789999999999 5699999999998876
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSF 631 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGl 631 (772)
..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 6799999999999999986555577999999999999999999999998 999999999999987 78999999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+..............
T Consensus 181 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~---- 254 (327)
T 3lm5_A 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--NQETYLNISQVNVDYSE---- 254 (327)
T ss_dssp CEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCCCCT----
T ss_pred ccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHHHhcccccCc----
Confidence 86432 35668999999999999999999999999999999999996433 23333222222111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.++.+++.+||+.||++|||++|+++.
T Consensus 255 ---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 255 ---ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ---TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1112345678899999999999999999999863
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=336.83 Aligned_cols=249 Identities=17% Similarity=0.234 Sum_probs=190.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++...+ ..++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 77 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTL 77 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEE
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc----ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEE
Confidence 367888999999999999975 6889999988643321 11224568999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 78 v~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEECCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred Eecccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 999997 699888863 3456899999999999999999999998 9999999999999999999999999875432
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccccCC----
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVDP---- 703 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~d~---- 703 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+........ ..+.......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhhcc
Confidence 23567999999865 678999999999999999999999996433 22222222111 0111111000
Q ss_pred --------------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 --------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 --------------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+....++.+|+.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0001112345678899999999999999999999873
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=337.61 Aligned_cols=240 Identities=22% Similarity=0.293 Sum_probs=191.9
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC--CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|....++.||||++...... ....+.+.+|+++|.+++ |||||++++++...+ ..+
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 132 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 132 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc---HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEE
Confidence 4778899999999999999888999999998754322 334568999999999996 599999999998877 689
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~-- 635 (772)
+||| +.+|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 133 lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9999 568899999864 346899999999999999999999988 99999999999996 578999999998643
Q ss_pred ---------CCCCccccchhhhcc-----------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 636 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 ---------~~~~~~~~aPE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
..++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .............
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIIDPNH 285 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHCTTS
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-HHHHHHHHhCccc
Confidence 235668999999864 4688999999999999999999999964332 2222333332211
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++||++.|+++.
T Consensus 286 ~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cC---------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 10 0111124578899999999999999999999864
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=320.34 Aligned_cols=239 Identities=20% Similarity=0.318 Sum_probs=194.2
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 83 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 83 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC----TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc----hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEE
Confidence 67888999999999999975 688999998865432 223467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 84 LEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp EECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 999999999999853 346899999999999999999999988 999999999999999999999999987532
Q ss_pred -------CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 -------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..+ +.++||||||+++|||+||+.||.........+.. ........ .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~----~----- 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL----N----- 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH-HHTTCTTS----T-----
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-hhhccccc----C-----
Confidence 234567999999877665 78899999999999999999999754433222221 11111110 0
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 11234467889999999999999999999876
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=329.21 Aligned_cols=249 Identities=21% Similarity=0.347 Sum_probs=197.8
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc--CCCCcccceeEEEEcCCC--ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEEDEP--FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~--l~HpNIV~l~g~~~~~~~--~~ 555 (772)
+++.+.+|+|+||+||+|+.. ++.||||.+.... ...+.+|++++.. ++||||+++++++...+. ..
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG--------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred EEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh--------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 478889999999999999984 8899999875321 3467788888887 799999999999987642 15
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILld~~~~~kLs 627 (772)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEEEC
T ss_pred eEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEEEE
Confidence 7999999999999999953 35899999999999999999999 666 9999999999999999999999
Q ss_pred cccCccCC-------------CCCCccccchhhhccCC------CCCCCchHHHHHHHHHHHcC----------CCcccC
Q 004124 628 DFSFWNNT-------------TAAKTGSAAMELLETSA------VDLESNVYSFGTILFEMITG----------RISYSI 678 (772)
Q Consensus 628 DFGla~~~-------------~~~~~~~~aPE~~~~~~------~s~ksDVwSfGvvL~ELltG----------~~P~~~ 678 (772)
|||+++.. ..++..|+|||.+.+.. ++.++|||||||++|||+|| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 99987422 13456799999987652 33689999999999999999 778754
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 679 EN---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.. .....+........ ..+.+.. ...++.+.+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 270 LVPSDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TSCSSCCHHHHHHHHTTSC------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCcCcccHHHHHHHHHHHH------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 32 23334433332221 1111111 12467788999999999999999999999999999987654
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=339.46 Aligned_cols=236 Identities=18% Similarity=0.286 Sum_probs=191.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchh---hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~---~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||+||+|+. .+++.||||++........ .....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~ 103 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--F 103 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--E
Confidence 47889999999999999995 4678899998875432110 0112245778999999999999999999998877 6
Q ss_pred EEEEEeccCCC-ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 556 RMMVFEYSPNG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 556 ~~LV~Ey~~~G-sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
.++||||+.+| +|.+++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 79999999877 9999885 3456999999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 635 TT--------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. .++..|+|||.+.+..+ +.++|||||||++|||++|+.||...... . .....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~------~~~~~--- 242 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------V------EAAIH--- 242 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------T------TTCCC---
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------H------hhccC---
Confidence 32 24568999999987776 78999999999999999999999531110 0 00000
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 243 --~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 --PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111234678899999999999999999999874
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-37 Score=361.36 Aligned_cols=238 Identities=16% Similarity=0.227 Sum_probs=197.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||||++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..|+
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~l 419 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 419 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEE
Confidence 77889999999999999965 57889999987532211 22345688899999988 7999999999998776 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.++++. ...+++..+..|+.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+++..
T Consensus 420 V~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999864 356999999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..|+.++|||||||++|||+||+.||.. .+..+....+...... ++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~-----------~p 562 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVA-----------YP 562 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCC-----------CC
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCC-----------CC
Confidence 2356789999999999999999999999999999999999964 3445555555544322 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSM-----RGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~-----~evl~ 739 (772)
...+.++.+|+.+||+.||++||++ +||.+
T Consensus 563 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 3345778999999999999999997 56553
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=320.24 Aligned_cols=239 Identities=20% Similarity=0.335 Sum_probs=192.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||.||+|+.. +++.||||.+....... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 89 (276)
T 2h6d_A 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMV 89 (276)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc--hhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEE
Confidence 67788999999999999976 78899999886432211 223467899999999999999999999998876 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999999864 346899999999999999999999988 99999999999999999999999998765332
Q ss_pred ------CCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 638 ------AKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 ------~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
++..|+|||.+.+..+ +.++||||||+++|||++|+.||... ...........+.... +.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~~ 232 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVFYI-----------PE 232 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------CT
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCcccC-----------ch
Confidence 3457899999887665 68999999999999999999999643 3333333333332111 12
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 234678899999999999999999999873
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=324.17 Aligned_cols=248 Identities=19% Similarity=0.289 Sum_probs=192.0
Q ss_pred HHHHHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEE
Q 004124 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
.++.....+-+++++.+|+|+||.||+|+.. +++.||+|.+..... .+.+.+|++++.+++||||+++++++
T Consensus 21 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~ 93 (314)
T 3com_A 21 DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------LQEIIKEISIMQQCDSPHVVKYYGSY 93 (314)
T ss_dssp ---------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-------CHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------HHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 3343334444578899999999999999975 588999998864321 24688999999999999999999999
Q ss_pred EcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 549 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
...+ ..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 94 ~~~~--~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 94 FKNT--DLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp EETT--EEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECC
T ss_pred EeCC--EEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEee
Confidence 8876 67999999999999999853 3457899999999999999999999998 99999999999999999999999
Q ss_pred ccCccCC---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 629 FSFWNNT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 629 FGla~~~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
||++... ..++..|+|||.+.+..++.++||||||+++|||++|+.||.... .............+.
T Consensus 169 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~-- 244 (314)
T 3com_A 169 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--PMRAIFMIPTNPPPT-- 244 (314)
T ss_dssp CTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCC--
T ss_pred cccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCcc--
Confidence 9987532 224557899999998899999999999999999999999996432 222222222221110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 245 F------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp C------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 112234567889999999999999999999986
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=336.91 Aligned_cols=242 Identities=19% Similarity=0.312 Sum_probs=193.9
Q ss_pred ccccccCccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+. .+++.||||++....... .....+.+.+|++++.++ +||||+++++++...+ .
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~ 133 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--K 133 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--E
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--e
Confidence 6788899999999999997 478999999986533211 011224577899999999 6999999999998877 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 7999999999999999864 346899999999999999999999988 999999999999999999999999987532
Q ss_pred ----------CCCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcCCCCcccc
Q 004124 636 ----------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ----------~~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~ 701 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... .....+.........+
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 284 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----- 284 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-----
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-----
Confidence 135667999999875 457899999999999999999999997433 2334444444433222
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
++...+..+.+++.+||+.||++|| ++.|+++.
T Consensus 285 ------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 285 ------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1223446788999999999999999 99998864
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=336.45 Aligned_cols=253 Identities=18% Similarity=0.215 Sum_probs=189.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++.............+.+.+|++++++++||||+++++++...+ ..++
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 89 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISL 89 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEE
Confidence 367888999999999999965 5889999998754332222222356889999999999999999999998776 5699
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999975 88888753 3456888999999999999999999998 9999999999999999999999999986432
Q ss_pred -------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCC----ccc---
Q 004124 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPL----KDI--- 700 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~----~~~--- 700 (772)
.++..|+|||.+.+ ..++.++|||||||++|||++|..||.... ..+........ ..+. .+.
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHcCCCChhhhhhhccC
Confidence 24557999999865 458999999999999999999999986432 22222222221 0110 000
Q ss_pred ---cC-Cccc-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 701 ---VD-PTLK-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 701 ---~d-~~l~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+. .... ......+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000 1113345789999999999999999999999874
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=344.20 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=190.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++++.++|||||++++++...+. .
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc---ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367889999999999999864 688899999865421 23345678999999999999999999999975432 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++|||||++ +|.+.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999975 5666653 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcc------
Q 004124 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKD------ 699 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~------ 699 (772)
.. .++..|+|||.+.+..|+.++||||+||++|||++|+.||...+ ..+....++.. ..+..+
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~--~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHcc
Confidence 32 34567999999999999999999999999999999999996432 22222211110 000000
Q ss_pred --------------------ccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 --------------------IVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 --------------------~~d~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..... ..........++.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 001112336789999999999999999999999874
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=321.54 Aligned_cols=244 Identities=20% Similarity=0.236 Sum_probs=194.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|... ++..+|+|++....... .....+.+.+|++++++++||||+++++++...+....++
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR-IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc-cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 367888999999999999964 67899999886543221 1234567999999999999999999999986544336799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+++| |.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 99999876 777776555567999999999999999999999998 9999999999999999999999999875432
Q ss_pred ---------CCCccccchhhhccCC--CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 ---------AAKTGSAAMELLETSA--VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ---------~~~~~~~aPE~~~~~~--~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+.+.. ++.++|||||||++|||+||+.||.. .+..+.......+....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~i~~~~~~~-------- 232 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENIGKGSYAI-------- 232 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCCCC--------
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHhcCCCCC--------
Confidence 2456789999987543 37799999999999999999999964 33444444443332211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 233 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 ---PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12334678899999999999999999999964
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=333.60 Aligned_cols=256 Identities=19% Similarity=0.244 Sum_probs=192.2
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|+. .+|+.||||++..... .....+++.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46788999999999999997 4689999998854321 23345679999999999999999999999976532 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 8899999853 46899999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCc--------
Q 004124 635 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLK-------- 698 (772)
Q Consensus 635 ~~------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~-------- 698 (772)
.. .++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+ ..+....+... ..+..
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--HLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 34567899999876 789999999999999999999999996432 22222222111 00100
Q ss_pred -----------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004124 699 -----------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 699 -----------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
................++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 001111122223446788999999999999999999999874 444433
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=345.23 Aligned_cols=253 Identities=14% Similarity=0.153 Sum_probs=180.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC---Cce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~---~~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|++++|||||++++++.... ...
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE---DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc---CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478889999999999999865 688999998864322 1234567999999999999999999999985432 125
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.|+||||+ +|+|.+++. ....+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 79999998 579998885 3456999999999999999999999998 999999999999999999999999998754
Q ss_pred C------------------------------------CCCccccchhhh-ccCCCCCCCchHHHHHHHHHHHc-------
Q 004124 636 T------------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMIT------- 671 (772)
Q Consensus 636 ~------------------------------------~~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELlt------- 671 (772)
. .++..|+|||++ ....|+.++|||||||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 2 125569999986 56679999999999999999999
Q ss_pred ----CCCcccCCCCC------------------HHHHHHHHh--hcCCC------------------CccccCCcccccc
Q 004124 672 ----GRISYSIENGS------------------LENWASEYL--KGEQP------------------LKDIVDPTLKSFQ 709 (772)
Q Consensus 672 ----G~~P~~~~~~~------------------~~~~~~~~~--~~~~~------------------~~~~~d~~l~~~~ 709 (772)
|+.+|.+.... .......+. .+... ........+....
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 55555332100 000000000 00000 0000001111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+....++.+|+.+||+.||++|||++|+++.
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3346788999999999999999999999874
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=329.36 Aligned_cols=244 Identities=20% Similarity=0.309 Sum_probs=195.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccc---hhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA---DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~---~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|.|+||.||+|+.. +|+.||||++...... .......+.+.+|+.++.++ +||||+++++++...+ .
T Consensus 97 ~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 174 (365)
T 2y7j_A 97 DPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--F 174 (365)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--E
T ss_pred ccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--E
Confidence 67788999999999999985 7899999988654321 11123356789999999999 8999999999998876 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 8999999999999999863 356899999999999999999999998 999999999999999999999999987533
Q ss_pred --------CCCCccccchhhhcc------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 636 --------TAAKTGSAAMELLET------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||... ...........+......
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~-- 326 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSS-- 326 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCH--
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCC--
Confidence 234567999998853 36889999999999999999999999643 233333333333211110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+ .....+.++.+++.+||+.||++||++.|+++
T Consensus 327 -~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 -P----EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -H----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -c----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 00123467889999999999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=333.61 Aligned_cols=240 Identities=13% Similarity=0.223 Sum_probs=194.1
Q ss_pred cccccccCccceEEEEEEE------EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC---CCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGT------LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~------~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~ 550 (772)
+.+.+.+|+|+||+||+|+ ...++.||||++.... ..++.+|++++.+++ |+||+++++++..
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3677889999999999994 4568899999886432 246778888888886 9999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhh---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------- 620 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~---~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~------- 620 (772)
.+ ..++||||+++|+|.+++... ....++|..+..|+.||+.||+|||+++ ||||||||+|||++.
T Consensus 139 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 139 QN--GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp SS--CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGTCC--
T ss_pred CC--CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecccccCccc
Confidence 77 679999999999999999643 2456999999999999999999999988 999999999999998
Q ss_pred ----CCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004124 621 ----DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 621 ----~~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-- 292 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-- 292 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence 899999999998432 235678999999999999999999999999999999999985322110
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhhhhcC
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR-PSMRGIAAKLKEITAME 748 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~ 748 (772)
........... ..+.+.+++..|++.+|.+| |+++++.+.|+++....
T Consensus 293 -------------~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 -------------CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -------------EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00111111111 24567789999999999999 68999999998876654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=334.93 Aligned_cols=239 Identities=19% Similarity=0.308 Sum_probs=193.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.+|+|.+..... .+.+|++++.++ +|||||++++++.+.+ ..+
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~ 92 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVY 92 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEE
Confidence 377889999999999999975 678899998864321 245688888888 7999999999998876 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~----~~~kLsDFGla~ 633 (772)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++
T Consensus 93 lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999999853 456899999999999999999999998 9999999999998433 359999999986
Q ss_pred CC---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCC-CCHHHHHHHHhhcCCCCccccCC
Q 004124 634 NT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 634 ~~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ..++..|+|||.+.+..++.++|||||||++|||++|+.||.... ....+.......+......
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~---- 244 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG---- 244 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS----
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc----
Confidence 32 224567999999988888999999999999999999999997543 3444555555444322111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......++++.+++.+||+.||++||++.|+++.
T Consensus 245 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 ---GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1112345678899999999999999999999864
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=333.36 Aligned_cols=250 Identities=18% Similarity=0.290 Sum_probs=194.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. ++..||+|++.... .....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 109 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 109 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc----CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEE
Confidence 67888999999999999976 67889999886542 2334567999999999999999999999999877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~---- 634 (772)
|||+++|+|.+++.. ...+++..+..++.+++.||+|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 110 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999999864 34689999999999999999999985 7 99999999999999999999999998742
Q ss_pred ---CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh-hcC------------CCCc
Q 004124 635 ---TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL-KGE------------QPLK 698 (772)
Q Consensus 635 ---~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~-~~~------------~~~~ 698 (772)
...++..|+|||.+.+..++.++|||||||++|||+||+.||............... .+. ....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 234567899999999999999999999999999999999999643321111110000 000 0000
Q ss_pred -------------ccc----CCcccc-ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 699 -------------DIV----DPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 699 -------------~~~----d~~l~~-~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.. ...... .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 000000 011235678999999999999999999999864
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=324.49 Aligned_cols=240 Identities=20% Similarity=0.288 Sum_probs=192.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. ++..+++|.+...... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 93 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-----ELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWI 93 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEE
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-----HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEE
Confidence 478899999999999999976 5788999987654322 2467899999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc-----
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----- 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~----- 633 (772)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999998853 3456899999999999999999999988 9999999999999999999999999753
Q ss_pred ----CCCCCCccccchhhh-----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 634 ----NTTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 634 ----~~~~~~~~~~aPE~~-----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
....++..|+|||.+ ....++.++|||||||++|||+||+.||... +.............+. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~--~---- 242 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSDPPT--L---- 242 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--C----
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHhccCCcc--c----
Confidence 223456789999987 4677899999999999999999999999633 3333333333332211 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112334567889999999999999999999875
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=324.57 Aligned_cols=239 Identities=19% Similarity=0.288 Sum_probs=196.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. +++.||+|.+...... ...+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 97 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWI 97 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEE
Confidence 477889999999999999864 6889999988654322 23467999999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 98 v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 98 IMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred EEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999999985 356899999999999999999999998 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++||||||+++|||+||+.||... ...+..........+ ...
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~ 240 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNNPP----------TLE 240 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC----------CCC
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--CHHHHHHHhhcCCCC----------CCc
Confidence 22455789999999999999999999999999999999999633 222322222222111 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...+.++.+++.+||+.||++|||+.|+++..
T Consensus 241 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 241 GNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 23346788999999999999999999998753
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=345.42 Aligned_cols=266 Identities=14% Similarity=0.193 Sum_probs=204.3
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc-ccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN-FVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN-IV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||.||+|+. .+++.||||++...... .++.+|++++..++|++ |..+..++...+ ..+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~ 79 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNV 79 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEE
Confidence 37788999999999999996 56889999987654322 35789999999998754 555555555555 679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~ 634 (772)
+||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+.+ ||||||||+|||| +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 9999999863 3456999999999999999999999998 9999999999999 6889999999999753
Q ss_pred C----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCC
Q 004124 635 T----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPL 697 (772)
Q Consensus 635 ~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~ 697 (772)
. ..++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--- 232 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--- 232 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH---
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc---
Confidence 2 2345579999999999999999999999999999999999975332 2222222211110
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhh
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEIL 767 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~ 767 (772)
....+......++.++.+++..||+.+|++||++.+|++.|+++...... +......|+.+...
T Consensus 233 ---~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~---~~~~~~dW~~~~~~ 296 (483)
T 3sv0_A 233 ---VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF---QFDYVFDWTILKYQ 296 (483)
T ss_dssp ---HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---CCSSCCHHHHHTC-
T ss_pred ---ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC---CccCCcCchhhccc
Confidence 00111112223457899999999999999999999999999998765432 34456777766443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=331.74 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=197.4
Q ss_pred HHHHHHhhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccch------hhhhHHHHHHHHHHHHhcCCCCcccc
Q 004124 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD------WSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~------~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
.++....++| ++.+.+|+|+||.||+|+..++..||||++....... ......+.+.+|++++++++||||++
T Consensus 15 ~~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 15 AELHAMQSPY-TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHTTCSC-EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHhccce-EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 3444444444 7788999999999999998889999999886543221 11233468999999999999999999
Q ss_pred eeEEEEcCC---CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004124 544 LIGYCEEDE---PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 544 l~g~~~~~~---~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
+++++...+ ....++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcC
Confidence 999986532 225799999997 688888863 3456999999999999999999999998 999999999999999
Q ss_pred CCcEEEccccCccCCC--------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh
Q 004124 621 DYAAKISDFSFWNNTT--------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691 (772)
Q Consensus 621 ~~~~kLsDFGla~~~~--------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~ 691 (772)
++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 9999999999986322 23456899999876 678999999999999999999999996432 222222221
Q ss_pred h--cCCC-------------------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 692 K--GEQP-------------------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 692 ~--~~~~-------------------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
. +... .............+.....+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1 0000 00011111111223345678999999999999999999999874
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=332.64 Aligned_cols=248 Identities=17% Similarity=0.234 Sum_probs=186.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE---EGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHL 110 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc---cccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEE
Confidence 478889999999999999854 6889999998654321 233457889999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-----CCCCcEEEccccCcc
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL-----TEDYAAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl-----d~~~~~kLsDFGla~ 633 (772)
||||++ |+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++
T Consensus 111 v~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999997 599999853 346899999999999999999999998 9999999999999 455679999999875
Q ss_pred CC---------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcc---
Q 004124 634 NT---------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKD--- 699 (772)
Q Consensus 634 ~~---------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~--- 699 (772)
.. ..++..|+|||.+.+. .++.++|||||||++|||+||+.||.... ..+........ ..+...
T Consensus 186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--EIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--HHHHHHHHHHHhCCCchhhhh
Confidence 32 1235679999998764 58999999999999999999999996433 22222222211 000000
Q ss_pred --------------ccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 700 --------------IVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 --------------~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+. .......+++.+|+.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 011124567899999999999999999999985
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=344.37 Aligned_cols=242 Identities=21% Similarity=0.283 Sum_probs=192.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. ++..+|+|++....... .....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 113 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST---SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYL 113 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc---hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 478889999999999999975 67889999987543221 12357899999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 114 v~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 114 VMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999999998853 356899999999999999999999998 999999999999976 456999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+. ..++.++||||+||++|||++|+.||.. ....+.......+..... .+.
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~~--- 260 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG--QTDQEILRKVEKGKYTFD---SPE--- 260 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---SGG---
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC---chh---
Confidence 23566899999886 5699999999999999999999999964 334455555544432211 111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 261 -~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 -WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 12345678899999999999999999999854
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=330.06 Aligned_cols=248 Identities=20% Similarity=0.321 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 102 (331)
T 4aaa_A 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD---DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLV 102 (331)
T ss_dssp EEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC---chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEE
Confidence 67889999999999999975 588999998865432 2334567889999999999999999999999877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999999888764 3456999999999999999999999998 999999999999999999999999988542
Q ss_pred -----CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--------------cCC
Q 004124 636 -----TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--------------GEQ 695 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--------------~~~ 695 (772)
..++..|+|||.+.+. .++.++|||||||++|||+||+.||..... .+....... ...
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD--IDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 2345679999998765 789999999999999999999999964432 111111110 000
Q ss_pred CCccccCCcc------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 PLKDIVDPTL------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~~~d~~l------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......+.. ....+..++++.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000111111 1112234678999999999999999999999886
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=339.83 Aligned_cols=250 Identities=16% Similarity=0.212 Sum_probs=179.7
Q ss_pred ccccc-ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig-~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++.| ++|+|+||+||+|+.. +++.||+|++..... ...+.+|+++|++++|||||++++++.......
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 35545 6999999999999975 578899998864321 236889999999999999999999997644447
Q ss_pred EEEEEeccCCCChhhhhhhhc-------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcE
Q 004124 556 RMMVFEYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAA 624 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~-------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~ 624 (772)
.++||||++ |+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+ +.++.+
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcE
Confidence 899999996 58888875321 224899999999999999999999998 9999999999999 778999
Q ss_pred EEccccCccCCC------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-------H
Q 004124 625 KISDFSFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL-------E 684 (772)
Q Consensus 625 kLsDFGla~~~~------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-------~ 684 (772)
||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....+. .
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999999986432 23567999999876 458999999999999999999999996443211 1
Q ss_pred HHHHHHhhc-CCCCccccCCcccccc---------------------------HHHHHHHHHHHHHcccCCCCCCCCHHH
Q 004124 685 NWASEYLKG-EQPLKDIVDPTLKSFQ---------------------------ENVLEELLVVIKNCVHPDPKQRPSMRG 736 (772)
Q Consensus 685 ~~~~~~~~~-~~~~~~~~d~~l~~~~---------------------------~~~~~~l~~Li~~Cl~~dP~~RPs~~e 736 (772)
+.+..+... ..+.... .+.+...+ .....++.+|+.+||+.||++|||+.|
T Consensus 252 ~~l~~i~~~~g~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKD-WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHCCCCTTT-CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHhhCCCChhh-cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 111111110 0000000 00000000 001456889999999999999999999
Q ss_pred HHHH
Q 004124 737 IAAK 740 (772)
Q Consensus 737 vl~~ 740 (772)
+++.
T Consensus 331 ~L~h 334 (405)
T 3rgf_A 331 AMQD 334 (405)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9874
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=340.06 Aligned_cols=247 Identities=8% Similarity=0.051 Sum_probs=176.1
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH---HHhcCCCCccccee-------EEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID---TLSKVNHKNFVNLI-------GYCE 549 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~---~L~~l~HpNIV~l~-------g~~~ 549 (772)
++.+.+|+|+||+||+|+.. +++.||||++....... ....+.+.+|++ .|+. +|||||+++ +++.
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS--RSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH--HHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc--ccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 67788999999999999965 78899999987654322 334567888854 5555 799987755 5554
Q ss_pred cCCC---------------ceEEEEEeccCCCChhhhhhhhccCCCCHHHH------HHHHHHHHHHHHHHhcCCCCeEe
Q 004124 550 EDEP---------------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR------LRIAMGMAYCLEHMHQLTPPIAH 608 (772)
Q Consensus 550 ~~~~---------------~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~------~~Ia~~ia~gL~yLH~~~~~IvH 608 (772)
..+. ...++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+.+ |+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 3321 23799999998 89999997542 23455556 788899999999999998 999
Q ss_pred eCCCCCCeEECCCCcEEEccccCccCCC------CCCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcccCCC
Q 004124 609 RNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN 680 (772)
Q Consensus 609 rDLKp~NILld~~~~~kLsDFGla~~~~------~~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~ 680 (772)
|||||+|||++.++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||....
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 297 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT 297 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999986432 23468999999977 779999999999999999999999997543
Q ss_pred CCHHHHHHHHhhcCCCCccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...... ... ........... .......++++.+++.+||+.||++|||+.|+++
T Consensus 298 ~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 298 PGIKGS----WKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTCTTC----CCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccccc----hhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211000 000 00000000000 0111245678899999999999999999999975
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=345.95 Aligned_cols=243 Identities=21% Similarity=0.274 Sum_probs=198.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. +++.||||++....... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 103 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYL 103 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 477888999999999999975 78899999986543221 223467999999999999999999999999876 6899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kLsDFGla~~~ 635 (772)
||||+.+|+|.+++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999885 3456899999999999999999999998 9999999999999 56789999999987543
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+ .++.++||||+||++|||++|+.||... +..+....+..+..... .+
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~---~~---- 249 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFE---LP---- 249 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---SG----
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC---Cc----
Confidence 2 24668999999865 6999999999999999999999999643 33444444444422211 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++++.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 112345678899999999999999999999864
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=322.41 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=188.6
Q ss_pred cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEec
Q 004124 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
..+|+|+||+||+|+. .+++.||+|.+..... ...+.+.+|+.++++++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC--------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch-----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 4678899999999996 4678899998865432 23467999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCC----
Q 004124 563 SPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~~~~---- 636 (772)
+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999986542 235678899999999999999999988 999999999999987 8999999999875432
Q ss_pred -----CCCccccchhhhccC--CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 -----AAKTGSAAMELLETS--AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~~--~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+... .++.++||||||+++|||+||+.||................... + ..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~---~~~ 248 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-------P---EIP 248 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC-------C---CCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc-------c---ccc
Confidence 345679999998654 38899999999999999999999996433322222221111111 1 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 334567889999999999999999999986
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=332.87 Aligned_cols=253 Identities=13% Similarity=0.190 Sum_probs=198.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhh------------hhHHHHHHHHHHHHhcCCCCcccceeEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS------------KNLESQFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~------------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
++++.+|+|+||.||+|+. +++.||+|.+......... ....+.|.+|++++.+++||||+++++++
T Consensus 34 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 112 (348)
T 2pml_X 34 RIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII 112 (348)
T ss_dssp EEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEE
T ss_pred EEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 6788899999999999999 8999999998654321100 01126799999999999999999999999
Q ss_pred EcCCCceEEEEEeccCCCChhhh------hhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCC
Q 004124 549 EEDEPFTRMMVFEYSPNGSLFEH------LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 549 ~~~~~~~~~LV~Ey~~~GsL~~~------L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~ 621 (772)
.+.+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||+++.+
T Consensus 113 ~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 113 TNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKN 188 (348)
T ss_dssp ESSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEECTT
T ss_pred eeCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEEcCC
Confidence 9876 78999999999999998 644335779999999999999999999998 88 9999999999999999
Q ss_pred CcEEEccccCccCC-------CCCCccccchhhhccC-CCCC-CCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004124 622 YAAKISDFSFWNNT-------TAAKTGSAAMELLETS-AVDL-ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 622 ~~~kLsDFGla~~~-------~~~~~~~~aPE~~~~~-~~s~-ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
+.+||+|||++... ..++..|+|||.+.+. .++. ++|||||||++|||+||+.||...... .+.......
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i~~ 267 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNIRT 267 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHHTS
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhc
Confidence 99999999987642 2355679999998776 6666 999999999999999999999744332 333444433
Q ss_pred cCCCCccccC----Cc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 693 GEQPLKDIVD----PT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 693 ~~~~~~~~~d----~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+......... +. ........+.++.+++.+||+.||++||++.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3222111000 00 00011334568899999999999999999999986
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=322.27 Aligned_cols=241 Identities=17% Similarity=0.252 Sum_probs=184.3
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||+|++...... ....+.+.++...++.++||||+++++++.+.+ ..++|
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv 84 (290)
T 3fme_A 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWIC 84 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEE
T ss_pred hhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc---HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEE
Confidence 6788999999999999996 47889999988654221 223344556666688899999999999999876 67999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
|||++ |+|.+++... ....+++..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99997 5888887542 356799999999999999999999986 8 999999999999999999999999987532
Q ss_pred -------CCCCccccchhhh----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 -------TAAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 -------~~~~~~~~aPE~~----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..++..|+|||.+ ....++.++|||||||++|||+||+.||.......... ........+. .
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~--~---- 234 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL-KQVVEEPSPQ--L---- 234 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH-HHHHHSCCCC--C----
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH-HHHhccCCCC--c----
Confidence 2355679999996 56678999999999999999999999996443333332 2223221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 01233467889999999999999999999987
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=329.61 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=190.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC---ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367888999999999999864 688899998865322 13345678999999999999999999999976542 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||++ |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 5799999997 57888774 35899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CCcc------
Q 004124 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKD------ 699 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~------ 699 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..+.......... +..+
T Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--HIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhh
Confidence 32 34567999999999999999999999999999999999996432 2222222221100 0000
Q ss_pred ------------------------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 ------------------------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ------------------------~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..-+...........++.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000011123346789999999999999999999999874
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=324.45 Aligned_cols=245 Identities=16% Similarity=0.202 Sum_probs=189.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+. .+++.||||++.... .+.+.+|++++.+++ ||||+++++++.+......+
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 36788999999999999986 578899999876322 356899999999997 99999999999875444679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~~~~ 636 (772)
+||||+++++|.+++. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999998873 3889999999999999999999998 99999999999999776 89999999986322
Q ss_pred --------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-----------h-hcCC
Q 004124 637 --------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY-----------L-KGEQ 695 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~-----------~-~~~~ 695 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............. . ....
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 34557899999876 6789999999999999999999999964333222111100 0 0000
Q ss_pred CCcc----ccC----Ccc-----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 PLKD----IVD----PTL-----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~----~~d----~~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.... ... ... .......+.++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 000 000 0111224678899999999999999999999986
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=342.57 Aligned_cols=242 Identities=21% Similarity=0.276 Sum_probs=197.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++...... ......+.+|++++++++|||||++++++.+.+ ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 98 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEE
Confidence 478889999999999999975 7889999998643321 122467899999999999999999999999876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 99 VGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999999998854 356899999999999999999999998 99999999999995 4568999999998633
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+ .++.++||||+||++|||++|+.||... +..+....+..+..... .+
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~---~~---- 244 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFD---LP---- 244 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCSC---SG----
T ss_pred CCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCC---Cc----
Confidence 235668999999875 5999999999999999999999999643 34444444444432211 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++++.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112345678899999999999999999999874
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=340.79 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=188.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh---hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~---~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.+.+.+|+|+||+||+|... +++.||||++..+..... .......+.+|+++|++++|||||++++++... .
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~ 213 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---D 213 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---E
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---c
Confidence 477889999999999999864 578999999876432211 111223588999999999999999999998654 4
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla 632 (772)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 689999999999999885 3456999999999999999999999998 9999999999999654 45999999998
Q ss_pred cCCC--------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 633 NNTT--------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 633 ~~~~--------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
+... .++..|+|||.+. ...++.++|||||||++|||+||+.||....... ........+....
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~~~---- 364 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNF---- 364 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCCCC----
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCCCC----
Confidence 7532 2456899999974 4678899999999999999999999996433211 1111111111110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........++++.+++.+||+.||++||++.|+++
T Consensus 365 ---~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 ---IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 01111234567899999999999999999999986
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=329.86 Aligned_cols=255 Identities=16% Similarity=0.192 Sum_probs=194.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC---CceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~---~~~~ 556 (772)
++.+.+|+|+||+||+|+.. +++.||||++.... ......++.+|++++++++||||+++++++.... ....
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD----KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS----SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc----cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 67788999999999999975 68889999885432 1334567889999999999999999999987541 1257
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 699988853 46899999999999999999999998 9999999999999999999999999876432
Q ss_pred -------------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh--hcC
Q 004124 637 -------------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KGE 694 (772)
Q Consensus 637 -------------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~--~~~ 694 (772)
.++..|+|||.+.. ..++.++|||||||++|||++|+.||...+. ........ .+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQLLLIFGIIGT 241 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCC
Confidence 23556999998754 7789999999999999999999999964432 11111111 111
Q ss_pred CCCcc----c---------------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 695 QPLKD----I---------------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 695 ~~~~~----~---------------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
..... . .........+..+.++.+++.+||+.||++|||+.|+++. ++.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 315 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence 10000 0 0000111122445778999999999999999999999873 4444433
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=327.34 Aligned_cols=247 Identities=19% Similarity=0.289 Sum_probs=179.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+. .+++.||||.+..... ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 90 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC----QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWL 90 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEE
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc----chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEE
Confidence 36788999999999999985 4688999998764322 123457889999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhh------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 559 VFEYSPNGSLFEHLHIQ------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999998632 2345899999999999999999999988 999999999999999999999999976
Q ss_pred cCC--------------CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC-
Q 004124 633 NNT--------------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP- 696 (772)
Q Consensus 633 ~~~--------------~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~- 696 (772)
... ..++..|+|||.+.. ..++.++|||||||++|||+||+.||...... ...........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLTLQNDPPS 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHHHHTSSCCC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHHHhccCCCc
Confidence 432 124557999999865 56899999999999999999999999643321 112222222111
Q ss_pred Ccc-ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 LKD-IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~~-~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... ..++ ......+.++.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 110 0011 111234467889999999999999999999986
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=322.80 Aligned_cols=252 Identities=18% Similarity=0.228 Sum_probs=192.7
Q ss_pred cccccccCccceEEEEEEEE--cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEc---C
Q 004124 480 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEE---D 551 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~--~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~---~ 551 (772)
+++++.+|+|+||+||+|+. .+++.||+|++........ ....+.+|+++++.+ +||||+++++++.. .
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc---CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 37788999999999999997 4678899998875432211 112456677766665 89999999999872 1
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGl 631 (772)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 2226799999997 69999987555556999999999999999999999998 99999999999999999999999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCC---Cc
Q 004124 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQP---LK 698 (772)
Q Consensus 632 a~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~---~~ 698 (772)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ........... ... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcCCCCcccCc
Confidence 86432 34567899999998999999999999999999999999996432 22222222211 000 00
Q ss_pred c-----------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 D-----------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ~-----------~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. .....+..+....+.++.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0001111223345678889999999999999999999985
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=329.23 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=189.7
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC------
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------ 552 (772)
+++++.+|+|+||+||+|+. .+++.||+|++....... .....+.+|++++++++||||+++++++....
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 37788999999999999997 578899999886543322 22346889999999999999999999997643
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
....++||||++ |+|.+.+.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 125799999997 477777743 3356999999999999999999999998 999999999999999999999999987
Q ss_pred cCCC-------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh--hcCCC
Q 004124 633 NNTT-------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KGEQP 696 (772)
Q Consensus 633 ~~~~-------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~--~~~~~ 696 (772)
+... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... ........ .+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCC
Confidence 5321 23556999998865 5689999999999999999999999964332 22211111 11111
Q ss_pred Cc---cc-----------cCCccccccHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 LK---DI-----------VDPTLKSFQEN-----VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~---~~-----------~d~~l~~~~~~-----~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .. ........... ..+++.+|+.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 00 00000001111 1356889999999999999999999987
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=323.99 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=191.0
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC----Cc
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~----~~ 554 (772)
++++.+|+|+||.||+|+. .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.... ..
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred EEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 6788999999999999997 4688999998864432 135788999999999 8999999999997632 22
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 6799999999999999997655567999999999999999999999998 99999999999999999999999998764
Q ss_pred CC---------CCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 635 TT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~---------~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .++..|+|||.+. ...++.++|||||||++|||+||+.||.... ............. ...
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~--~~~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPA--PRL 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC--CCC
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCcc--ccC
Confidence 32 2456799999986 5678999999999999999999999995332 2222222222211 111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....+.++.+++.+||+.||++||++.|+++
T Consensus 255 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 K-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp S-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred C-------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 1123467889999999999999999999987
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=335.35 Aligned_cols=251 Identities=17% Similarity=0.199 Sum_probs=193.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC--------CCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--------HKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--------HpNIV~l~g~~~~ 550 (772)
+++++.+|+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 478889999999999999864 6788999988632 223467889999999986 8889999998873
Q ss_pred C--CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCC-----
Q 004124 551 D--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDY----- 622 (772)
Q Consensus 551 ~--~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~----- 622 (772)
. +....++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhh
Confidence 2 222679999999 67777777655556799999999999999999999997 8 99999999999999775
Q ss_pred --------------------------------------------cEEEccccCccCC------CCCCccccchhhhccCC
Q 004124 623 --------------------------------------------AAKISDFSFWNNT------TAAKTGSAAMELLETSA 652 (772)
Q Consensus 623 --------------------------------------------~~kLsDFGla~~~------~~~~~~~~aPE~~~~~~ 652 (772)
.+||+|||+++.. ..++..|+|||.+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence 7999999998533 23566899999999999
Q ss_pred CCCCCchHHHHHHHHHHHcCCCcccCCCCC----HHHHHHHHhh--cCCC-------------------CccccCCc---
Q 004124 653 VDLESNVYSFGTILFEMITGRISYSIENGS----LENWASEYLK--GEQP-------------------LKDIVDPT--- 704 (772)
Q Consensus 653 ~s~ksDVwSfGvvL~ELltG~~P~~~~~~~----~~~~~~~~~~--~~~~-------------------~~~~~d~~--- 704 (772)
++.++|||||||++|||+||+.||...... .......... +..+ ...+.+..
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 999999999999999999999999743321 1111111110 1000 00000000
Q ss_pred -------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 705 -------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 -------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.....++.+|+.+||+.||++|||+.|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234567788999999999999999999999985
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=324.55 Aligned_cols=248 Identities=19% Similarity=0.279 Sum_probs=193.8
Q ss_pred cccccccCccceEEEEEEEE--cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc------ccceeEEEEcC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 551 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~--~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN------IV~l~g~~~~~ 551 (772)
+++++.+|+|+||+||+|.. .+++.||||++... ....+.+.+|++++..++|+| |+++++++...
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 47888999999999999986 36788999987532 223467889999999887665 99999999887
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-----------
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE----------- 620 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~----------- 620 (772)
+ ..++||||+ +|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 90 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 G--HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC---
T ss_pred C--cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCcc
Confidence 7 789999999 899999997655557899999999999999999999998 999999999999987
Q ss_pred --------CCcEEEccccCccCCC------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-H
Q 004124 621 --------DYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-N 685 (772)
Q Consensus 621 --------~~~~kLsDFGla~~~~------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~ 685 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||...+.... .
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 244 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred ccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 6689999999976432 346679999999999999999999999999999999999964332111 1
Q ss_pred HHHHHhhcCCCCc--------cc---------------------cCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 686 WASEYLKGEQPLK--------DI---------------------VDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 686 ~~~~~~~~~~~~~--------~~---------------------~d~--~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.+.... +..+.. .. ..+ ..........+++.+++.+||+.||++|||+
T Consensus 245 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 245 MMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111111 100000 00 000 0001123557789999999999999999999
Q ss_pred HHHHH
Q 004124 735 RGIAA 739 (772)
Q Consensus 735 ~evl~ 739 (772)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=316.59 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=196.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccc----hhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA----DWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~----~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|+.. +++.||||.+...... .......+.+.+|++++.+++ ||||+++++++...+
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-- 97 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-- 97 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--
Confidence 67888999999999999975 6788999998654311 111234567899999999995 999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 68999999999999999864 356899999999999999999999998 99999999999999999999999998754
Q ss_pred CC--------CCCccccchhhhc------cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 635 TT--------AAKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .++..|+|||.+. ...++.++||||||+++|||++|+.||... ...........+.....
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~-- 249 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFG-- 249 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC--
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccC--
Confidence 32 2455789999874 456889999999999999999999999643 33333333333322111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ .....+.++.+++.+||+.||++|||+.|+++
T Consensus 250 -~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 -SP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -TT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -cc----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 11234567889999999999999999999975
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=334.17 Aligned_cols=247 Identities=18% Similarity=0.259 Sum_probs=187.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC------
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------ 552 (772)
+++++.+|+|+||+||+|+. .+++.||||++..... ...+|++++++++|||||++++++....
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 37788999999999999986 5789999998864321 2347999999999999999999985432
Q ss_pred ------------------------------CceEEEEEeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHh
Q 004124 553 ------------------------------PFTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH 600 (772)
Q Consensus 553 ------------------------------~~~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH 600 (772)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123789999998 688887753 24567999999999999999999999
Q ss_pred cCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCCC--------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHH
Q 004124 601 QLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMI 670 (772)
Q Consensus 601 ~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~~~~--------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELl 670 (772)
+.+ |+||||||+|||++ .++.+||+|||+++... .++..|+|||.+.+. .++.++||||+||++|||+
T Consensus 159 ~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 159 SLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp TTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred HCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 988 99999999999997 68999999999986432 235569999998764 4899999999999999999
Q ss_pred cCCCcccCCCCCHHHHHHHHhhc-CCC-----------CccccCCcc-----c-cccHHHHHHHHHHHHHcccCCCCCCC
Q 004124 671 TGRISYSIENGSLENWASEYLKG-EQP-----------LKDIVDPTL-----K-SFQENVLEELLVVIKNCVHPDPKQRP 732 (772)
Q Consensus 671 tG~~P~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~d~~l-----~-~~~~~~~~~l~~Li~~Cl~~dP~~RP 732 (772)
+|+.||.... ..+........ ..+ ..+..-+.. . .++...+.++.+|+.+||+.||++||
T Consensus 237 ~g~~pf~~~~--~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 237 LGKPLFSGET--SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred hCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999996432 22222222110 000 000000110 0 12233567799999999999999999
Q ss_pred CHHHHHHH
Q 004124 733 SMRGIAAK 740 (772)
Q Consensus 733 s~~evl~~ 740 (772)
|+.|+++.
T Consensus 315 t~~e~l~h 322 (383)
T 3eb0_A 315 NPYEAMAH 322 (383)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999853
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=342.65 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=194.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh--------hhhHHHHHHHHHHHHhcCCCCcccceeEEEEc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW--------SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~--------~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+.+++.+|+|+||+||+|+.. ++..+|+|++........ .....+.+.+|++++++++|||||++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 477889999999999999975 578899999875432210 01234678999999999999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEEc
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKIS 627 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kLs 627 (772)
.+ ..++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 118 ~~--~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 118 KK--YFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp SS--EEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred CC--EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEE
Confidence 76 68999999999999999854 356999999999999999999999998 99999999999998775 69999
Q ss_pred cccCccCC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004124 628 DFSFWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 628 DFGla~~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
|||+++.. ..++..|+|||.+. ..++.++||||+||++|||++|+.||.. .+..+....+..+......
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG--QNDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCH
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCCCc
Confidence 99988532 23566899999986 5699999999999999999999999964 3344555555444321110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 269 -------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 269 -------NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp -------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0112345678999999999999999999999863
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=324.11 Aligned_cols=245 Identities=20% Similarity=0.283 Sum_probs=188.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||.||+|+.. +++.||||.+....... ........+.+|++++++++||||+++++++...+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 88 (322)
T 2ycf_A 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED--- 88 (322)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS---
T ss_pred eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc---
Confidence 478889999999999999965 57889999886543211 11122346889999999999999999999987654
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kLsDFGla 632 (772)
.++||||+++|+|.+++. ....+++.....++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 689999999999999885 3456899999999999999999999998 999999999999987654 999999998
Q ss_pred cCCCC--------CCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 633 NNTTA--------AKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 633 ~~~~~--------~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
+.... ++..|+|||.+. ...++.++|||||||++|||+||+.||....... ........+....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~---- 239 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNF---- 239 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCCC----
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCcccc----
Confidence 75432 456899999873 5678999999999999999999999996433221 1111111221110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........+.++.+++.+||+.||++||++.|+++
T Consensus 240 ---~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 ---IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 01111234567899999999999999999999984
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=331.14 Aligned_cols=248 Identities=17% Similarity=0.310 Sum_probs=191.5
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+... .+++|++....... ...+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~ 108 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIIT 108 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEEC
T ss_pred EEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEe
Confidence 678889999999999999864 48888876543221 12245788999999999999999999999876 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~----- 635 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999853 3346899999999999999999999998 99999999999998 679999999986532
Q ss_pred ---------CCCCccccchhhhcc---------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004124 636 ---------TAAKTGSAAMELLET---------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 636 ---------~~~~~~~~aPE~~~~---------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
..++..|+|||.+.. ..++.++|||||||++|||+||+.||... ...........+..+.
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~ 262 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMKPN 262 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCCCC
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCCCC
Confidence 123456899999853 45788999999999999999999999643 3333333333332111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004124 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
... ...+.++.+++.+||+.||++|||+.|+++.|+++......
T Consensus 263 --~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 263 --LSQ-------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --CCC-------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --CCc-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111 12335688999999999999999999999999998876543
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=337.76 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=162.9
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC------CCCcccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV------NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l------~HpNIV~l~g~~~~~~ 552 (772)
+++++.+|+|+||+||+|+.. +++.||||++... ....+.+.+|++++..+ .|+||+++++++...+
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 477889999999999999865 5789999988642 22345677888888776 5779999999998877
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--EEEcccc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFS 630 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--~kLsDFG 630 (772)
..++||||+. |+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred --eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecc
Confidence 7899999996 69999987655567999999999999999999999988 999999999999999887 9999999
Q ss_pred CccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC
Q 004124 631 FWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 631 la~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 248 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 97532 23566799999999999999999999999999999999999644
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=321.65 Aligned_cols=247 Identities=16% Similarity=0.226 Sum_probs=185.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC-------
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED------- 551 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~------- 551 (772)
+++++.+|+|+||.||+|+.. +++.||+|++.... ....+++.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 367889999999999999976 48899999886442 23356789999999999999999999998532
Q ss_pred -----CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEE
Q 004124 552 -----EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAK 625 (772)
Q Consensus 552 -----~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~k 625 (772)
.....++||||++ |+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+|
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEE
T ss_pred cccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEE
Confidence 1125799999997 69999884 346899999999999999999999998 99999999999997 568999
Q ss_pred EccccCccCCC------------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004124 626 ISDFSFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 626 LsDFGla~~~~------------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
|+|||+++... .++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ..+.......
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~ 239 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--ELEQMQLILE 239 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 99999986432 12456899998765 678999999999999999999999996432 2222222222
Q ss_pred cCCCCcc-----------------ccCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 693 GEQPLKD-----------------IVDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 693 ~~~~~~~-----------------~~d~--~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....... ...+ .........+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1110000 0000 011112234678999999999999999999999986
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=335.81 Aligned_cols=252 Identities=19% Similarity=0.291 Sum_probs=188.4
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC----CCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~----~~~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++.... +.+.+|+++|++++|||||++++++... +..
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 367788999999999999975 58999999886432 1234799999999999999999988642 222
Q ss_pred eEEEEEeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 631 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGl 631 (772)
..++||||+++ +|.+.+.. .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchh
Confidence 36799999975 66666542 23467999999999999999999999988 9999999999999965 6789999999
Q ss_pred ccCC--------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--c-------
Q 004124 632 WNNT--------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--G------- 693 (772)
Q Consensus 632 a~~~--------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~------- 693 (772)
++.. ..++..|+|||.+.+. .++.++|||||||++|||++|+.||..... .+.+..++. +
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence 8643 2345679999998654 799999999999999999999999964331 222211111 0
Q ss_pred ---CCCCccccCCcccc------ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 004124 694 ---EQPLKDIVDPTLKS------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 745 (772)
Q Consensus 694 ---~~~~~~~~d~~l~~------~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~ 745 (772)
.....+..-+.+.. +....+.++.+|+.+||+.||++||++.|+++. ++++.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00011111111111 122345789999999999999999999999863 44443
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=313.93 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=187.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC-------
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------- 552 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------- 552 (772)
++++.+|+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 67788999999999999964 7889999988532 223467999999999999999999999886531
Q ss_pred ----CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 553 ----PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 553 ----~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
....++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEee
Confidence 2257999999999999999964 3345788899999999999999999998 99999999999999999999999
Q ss_pred ccCccCCC-----------------------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH
Q 004124 629 FSFWNNTT-----------------------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLE 684 (772)
Q Consensus 629 FGla~~~~-----------------------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~ 684 (772)
||+++... .++..|+|||.+.+. .++.++|||||||++|||++ ||... .+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-~~~~ 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-MERV 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-HHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-hhHH
Confidence 99876432 134568999998754 78999999999999999998 44311 1112
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.............. ..+....+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 236 NILKKLRSVSIEFP-------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHSTTCCCC-------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccccccccC-------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222222211111 1122344567889999999999999999999986
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=330.44 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=180.2
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|+. .+++.||||++..... .....+++.+|++++++++||||+++++++..... .
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788999999999999985 4688999998864321 12345678999999999999999999999975421 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 469999999 7899998853 56999999999999999999999998 99999999999999999999999999865
Q ss_pred CC------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccccC----
Q 004124 635 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVD---- 702 (772)
Q Consensus 635 ~~------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~d---- 702 (772)
.. .++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ .......+... ..+..+...
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 32 34567899999876 679999999999999999999999996433 22222222110 011000000
Q ss_pred ---------------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 703 ---------------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 703 ---------------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
............++.+|+.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00011112234678999999999999999999999864
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=334.55 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=159.2
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|++++|||||++++++..... ..
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 377889999999999999965 578899998864321 13345689999999999999999999999976531 25
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+. |+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 799999996 69999985 3456999999999999999999999998 999999999999999999999999998643
Q ss_pred C-------------------------------CCCccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcc
Q 004124 636 T-------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 636 ~-------------------------------~~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
. .++..|+|||.+ ....++.++||||+||++|||++|..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2 235579999986 5667999999999999999999865544
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=326.56 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=191.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+++++.+|+|+||.||+|+.. ++..||||++.... .....+.+.+|++++.+++||||+++++++..... ..
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE----HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT----CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc----CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 477889999999999999965 67889999886432 12344679999999999999999999999975431 25
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+. |+|.+++.. ..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 799999997 699988853 45899999999999999999999998 999999999999999999999999987532
Q ss_pred C------------CCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCCcccc
Q 004124 636 T------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~------------~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~ 701 (772)
. .++..|+|||.+. ...++.++|||||||++|||+||+.||...... ....+...... +..+..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~ 256 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS--PSQEDL 256 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCS--CCHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCC--CCHHHH
Confidence 2 3456789999864 455899999999999999999999999643321 11111111100 000000
Q ss_pred ----------------CC---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 702 ----------------DP---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 ----------------d~---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. ...........++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0011112345678999999999999999999999864
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=353.14 Aligned_cols=244 Identities=20% Similarity=0.335 Sum_probs=199.4
Q ss_pred ccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.. +..+|+|+..... .....+.|.+|+.++++++|||||+++|++.++ ..
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~ 465 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PV 465 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ce
Confidence 677889999999999998743 4568888765432 233457899999999999999999999998543 36
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 899999999999999864 3346899999999999999999999988 9999999999999999999999999987542
Q ss_pred C----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 A----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ~----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+...
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~--------- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERL--------- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCC---------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC---------
Confidence 2 2246999999998999999999999999999997 99999633 333333333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1123345678899999999999999999999999998864
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=310.65 Aligned_cols=241 Identities=21% Similarity=0.271 Sum_probs=194.3
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 98 (287)
T 2wei_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (287)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEE
Confidence 478899999999999999975 6889999988654322 123467899999999999999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kLsDFGla~~~ 635 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 9999999999998853 346899999999999999999999998 9999999999999754 57999999987643
Q ss_pred CC--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 TA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.. ++..|+|||.+.+ .++.++||||||+++|||+||+.||... +..+.......+..... .+
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~---~~---- 244 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFD---LP---- 244 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---SG----
T ss_pred cCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC---ch----
Confidence 32 2346899998865 4899999999999999999999999643 33344444444322111 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11233567889999999999999999999987
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=327.00 Aligned_cols=248 Identities=17% Similarity=0.227 Sum_probs=191.4
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc----e
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF----T 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~----~ 555 (772)
.+.+.+|+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+.. .
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc---chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 66788999999999999965 688999998865332 233457899999999999999999999999875521 2
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||+. |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 389999997 68887763 34899999999999999999999998 999999999999999999999999998643
Q ss_pred C------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcccc------
Q 004124 636 T------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIV------ 701 (772)
Q Consensus 636 ~------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~------ 701 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+........ ..+..+..
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDK 272 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence 2 34667999999876 789999999999999999999999996432 22222222211 01100000
Q ss_pred -------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 702 -------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 -------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
........+....++.+|+.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 001111122346789999999999999999999999864
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=332.37 Aligned_cols=254 Identities=18% Similarity=0.261 Sum_probs=188.8
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~~ 555 (772)
+++++.+|+|+||+||+|+...+..+|+|++..... ...+|+++++.++|||||++++++...+. ..
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 467888999999999999998787899998864321 12369999999999999999999865331 23
Q ss_pred EEEEEeccCCCChhhhhhh-hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCcc
Q 004124 556 RMMVFEYSPNGSLFEHLHI-QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~-~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~ 633 (772)
.++||||++++.+....+. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 6899999986544333221 23567999999999999999999999998 99999999999999 79999999999986
Q ss_pred CC--------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCC-------
Q 004124 634 NT--------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQ------- 695 (772)
Q Consensus 634 ~~--------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~------- 695 (772)
.. ..++..|+|||.+.+. .++.++|||||||++|||++|+.||..... .+....... +..
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG--IDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHH
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHh
Confidence 43 2245579999998654 589999999999999999999999964432 222211111 000
Q ss_pred --------CCccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004124 696 --------PLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 696 --------~~~~~~d~~l-~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
....+..... ..+....+.++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0000000000 01122355789999999999999999999999874 444433
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=324.52 Aligned_cols=191 Identities=24% Similarity=0.226 Sum_probs=160.9
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CC-----cccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HK-----NFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-Hp-----NIV~l~g~~~~~~ 552 (772)
+++++.+|+|+||+||+|+.. +++.||||++... .....++..|++++..++ |+ +|+++++++...+
T Consensus 56 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 367888999999999999965 6788999988632 223456778888888874 55 4999999998877
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCcEEEcccc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFS 630 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~~kLsDFG 630 (772)
..++||||++ |+|.+++.......+++..+..++.|++.||+|||.+..+|+||||||+|||++ .++.+||+|||
T Consensus 130 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 --HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp --EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred --ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 7899999996 599999976555679999999999999999999996444599999999999994 57889999999
Q ss_pred CccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCC
Q 004124 631 FWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 631 la~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 207 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98643 23466799999999999999999999999999999999999643
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=315.49 Aligned_cols=240 Identities=21% Similarity=0.300 Sum_probs=191.1
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC--CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||.||+|+..+++.||||++...... ....+.+.+|++++.+++ ||||+++++++...+ ..+
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 104 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 104 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc---ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEE
Confidence 3778899999999999999888999999998654322 334567999999999997 599999999998876 689
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~- 636 (772)
+||| +.+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++ +.+||+|||+++...
T Consensus 105 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 568899999863 356899999999999999999999998 999999999999965 899999999986432
Q ss_pred ----------CCCccccchhhhcc-----------CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004124 637 ----------AAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
.++..|+|||.+.. ..++.++|||||||++|||+||+.||........ ..........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 257 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHAIIDPNH 257 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHHCTTS
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-HHHHHHhccc
Confidence 24567999999865 4788899999999999999999999964333222 2222222111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++||++.|+++.
T Consensus 258 ~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 10 1111224678899999999999999999999864
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=319.16 Aligned_cols=265 Identities=17% Similarity=0.235 Sum_probs=184.3
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEE
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
+.....++| ++.+.+|+|+||+||+|+.. ++..||||++...... ...+.+|++.+..++|||||++++++.
T Consensus 17 ~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~l~~l~h~niv~~~~~~~ 89 (360)
T 3e3p_A 17 RSRKEMDRF-QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFY 89 (360)
T ss_dssp HHHHHHTTE-EEC----------CEEEEETTTCCEEEEEEEECCTTC------CCHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred hchhhccce-EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc------cHHHHHHHHHHHhcCCCCcccHHHhhh
Confidence 344445555 77889999999999999975 6889999987543211 235677888899999999999999986
Q ss_pred cCCC-----ceEEEEEeccCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHh--cCCCCeEeeCCCCCCeEECC
Q 004124 550 EDEP-----FTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH--QLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 550 ~~~~-----~~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH--~~~~~IvHrDLKp~NILld~ 620 (772)
..+. ...++||||+++ +|...+.. .....+++..+..++.|++.||+||| +.+ |+||||||+|||++.
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNE 166 (360)
T ss_dssp EECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEET
T ss_pred ccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeC
Confidence 5331 136899999976 55554432 24456899999999999999999999 666 999999999999996
Q ss_pred -CCcEEEccccCccCCC--------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH
Q 004124 621 -DYAAKISDFSFWNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690 (772)
Q Consensus 621 -~~~~kLsDFGla~~~~--------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~ 690 (772)
++.+||+|||+++... .++..|+|||.+.+. .++.++|||||||++|||+||+.||.... ........
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~~ 244 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN--SAGQLHEI 244 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH
T ss_pred CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC--hHHHHHHH
Confidence 8999999999986432 245579999998654 48999999999999999999999996433 22222222
Q ss_pred hhc-CCCC-------------ccccCCc-------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004124 691 LKG-EQPL-------------KDIVDPT-------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 691 ~~~-~~~~-------------~~~~d~~-------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
... ..+. ....+.. ........+.++.+|+.+||+.||++|||+.|+++. ++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 110 0000 0000000 001112246789999999999999999999999875 5555443
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=321.24 Aligned_cols=248 Identities=17% Similarity=0.226 Sum_probs=192.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc----e
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF----T 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~----~ 555 (772)
.+.+.+|+|+||+||+|+.. +|+.||||++..... .....+.+.+|+.++++++||||+++++++...+.. .
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred EEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56788999999999999964 688999998864322 233456789999999999999999999999875421 3
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++||||++ |+|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 489999997 68888773 34899999999999999999999998 999999999999999999999999998653
Q ss_pred C------CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC-----------
Q 004124 636 T------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP----------- 696 (772)
Q Consensus 636 ~------~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~----------- 696 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+......... .+
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 2 34567999999876 678999999999999999999999996433 222222221100 00
Q ss_pred --------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 697 --------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 --------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.........+.++.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000111112223456789999999999999999999999864
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=324.88 Aligned_cols=252 Identities=18% Similarity=0.283 Sum_probs=192.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-----------CCcccceeEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----------HKNFVNLIGY 547 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----------HpNIV~l~g~ 547 (772)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+.+|++++.+++ ||||++++++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 47788999999999999996 56889999988632 223457889999999886 8999999999
Q ss_pred EEcCC--CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEEC-----
Q 004124 548 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLT----- 619 (772)
Q Consensus 548 ~~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld----- 619 (772)
+...+ ....++||||+ +++|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETT
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccCCC
Confidence 87542 22579999999 89999999765556799999999999999999999997 8 99999999999994
Q ss_pred -CCCcEEEccccCccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC----HHHHHH
Q 004124 620 -EDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS----LENWAS 688 (772)
Q Consensus 620 -~~~~~kLsDFGla~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~----~~~~~~ 688 (772)
..+.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...... ......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 4458999999998633 23566799999999999999999999999999999999999743321 111111
Q ss_pred HHhh--cCCC-------------------CccccCC----------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004124 689 EYLK--GEQP-------------------LKDIVDP----------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737 (772)
Q Consensus 689 ~~~~--~~~~-------------------~~~~~d~----------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ev 737 (772)
.... +..+ ...+... ....++.....++.+|+.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 1111 0000 0000000 0012346778899999999999999999999999
Q ss_pred HHH
Q 004124 738 AAK 740 (772)
Q Consensus 738 l~~ 740 (772)
++.
T Consensus 332 l~h 334 (373)
T 1q8y_A 332 VNH 334 (373)
T ss_dssp HTC
T ss_pred hhC
Confidence 873
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=318.71 Aligned_cols=248 Identities=19% Similarity=0.258 Sum_probs=191.1
Q ss_pred cccccccCccceEEEEEEEEc-CC-cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc------ccceeEEEEcC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SG-VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 551 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~-~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN------IV~l~g~~~~~ 551 (772)
+++++.+|+|+||+||+|+.. ++ ..||+|++... ....+.+.+|++++++++|++ ++.+++++...
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 478889999999999999974 34 68999987532 223467889999999998776 89999999887
Q ss_pred CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-------------
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL------------- 618 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl------------- 618 (772)
+ ..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||+
T Consensus 95 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 G--HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred C--eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecccccccccccc
Confidence 7 789999999 678888876555567999999999999999999999988 9999999999999
Q ss_pred ------CCCCcEEEccccCccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-HH
Q 004124 619 ------TEDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 685 (772)
Q Consensus 619 ------d~~~~~kLsDFGla~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~ 685 (772)
+.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||....... ..
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 56789999999998632 235667999999999999999999999999999999999996433211 11
Q ss_pred HHHHHhhcCCCCc--------cc-c------CC----------------ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 686 WASEYLKGEQPLK--------DI-V------DP----------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 686 ~~~~~~~~~~~~~--------~~-~------d~----------------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.+.... +..+.. .. . +. ...........++.+|+.+||+.||++|||+
T Consensus 250 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 250 MMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 111111 111000 00 0 00 0001122345689999999999999999999
Q ss_pred HHHHH
Q 004124 735 RGIAA 739 (772)
Q Consensus 735 ~evl~ 739 (772)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=311.85 Aligned_cols=242 Identities=19% Similarity=0.285 Sum_probs=178.6
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||||++...... ....+.+.++..+++.++||||+++++++...+ ..++|
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv 102 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK---EENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIA 102 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCH---HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEE
Confidence 67788999999999999975 6889999998654321 223344555666788899999999999998876 68999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||+ ++.+. .+.......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~e~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAE-KLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHH-HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHH-HHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 44444 44334456799999999999999999999984 7 999999999999999999999999987533
Q ss_pred -----CCCCccccchhhhc-----cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 636 -----TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
..++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..+.......+..+.. +.
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~----~~- 252 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-DFEVLTKVLQEEPPLL----PG- 252 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-HHHHHHHHHHSCCCCC----CS-
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-cHHHHHHHhccCCCCC----Cc-
Confidence 23456799999984 56788999999999999999999999964332 3333444444322211 00
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++||++.|+++.
T Consensus 253 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 253 ---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234678899999999999999999999863
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=312.36 Aligned_cols=232 Identities=12% Similarity=0.112 Sum_probs=183.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+.. +++.||||++......+ ....+.|.+|++++.+++||||+++++++...+ ..++
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 108 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLV 108 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEE
Confidence 477889999999999999975 48899999987543322 334578999999999999999999999998877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 638 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~ 638 (772)
||||+++++|.+++.. . .......+|+.|++.||+|||+.+ |+||||||+|||++.++.+||+++|..
T Consensus 109 v~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~~~------ 176 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM------ 176 (286)
T ss_dssp EEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCCCC------
T ss_pred EEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecccc------
Confidence 9999999999999842 2 355578899999999999999998 999999999999999999999977532
Q ss_pred CccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc---ccccHHHHHH
Q 004124 639 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL---KSFQENVLEE 715 (772)
Q Consensus 639 ~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l---~~~~~~~~~~ 715 (772)
+ .++.++|||||||++|||+||+.||...+.... + ........... .......+++
T Consensus 177 -----~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 177 -----P-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG------L---APAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp -----T-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC------S---EECCBCTTSCBCCHHHHCTTSCHH
T ss_pred -----C-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh------h---HHHHHHhccCCCChhhcccCCCHH
Confidence 2 368899999999999999999999974332100 0 00001111111 1122345678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 716 LLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 716 l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 9999999999999999 99999999999876544
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=335.86 Aligned_cols=243 Identities=18% Similarity=0.272 Sum_probs=184.1
Q ss_pred hhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCc
Q 004124 476 CEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
.++++.+.+.+|+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+
T Consensus 13 l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-- 82 (434)
T 2rio_A 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESDDHPNVIRYYCSETTDR-- 82 (434)
T ss_dssp CSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--
T ss_pred hhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 344545556789999999987777789999999885421 24578899999886 8999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhccC--C---CCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---------
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAE--H---LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--------- 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~--~---l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--------- 620 (772)
..++||||+. |+|.+++...... . ..+..+..|+.||+.||+|||+.+ |+||||||+|||++.
T Consensus 83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCT
T ss_pred eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccc
Confidence 6899999995 7999998643221 1 133345789999999999999998 999999999999965
Q ss_pred ----CCcEEEccccCccCCC-------------CCCccccchhhhcc-------CCCCCCCchHHHHHHHHHHHc-CCCc
Q 004124 621 ----DYAAKISDFSFWNNTT-------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMIT-GRIS 675 (772)
Q Consensus 621 ----~~~~kLsDFGla~~~~-------------~~~~~~~aPE~~~~-------~~~s~ksDVwSfGvvL~ELlt-G~~P 675 (772)
++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+| |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 4589999999876432 34567999999865 678999999999999999999 9999
Q ss_pred ccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
|........ ....+....... ........+.++.+++.+||+.||++|||+.||++
T Consensus 240 f~~~~~~~~----~i~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 240 FGDKYSRES----NIIRGIFSLDEM----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TCSTTTHHH----HHHHTCCCCCCC----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCchhhHH----HHhcCCCCcccc----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 964332221 222222111111 01123466788999999999999999999999985
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=318.24 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=173.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH-HHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~-~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.||||++..... .....++..|+. +++.++||||+++++++...+ ..++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~l 98 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWI 98 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEE
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEE
Confidence 67788999999999999975 688999999865432 222345566665 777889999999999998876 6799
Q ss_pred EEeccCCCChhhhhhhh---ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 559 VFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~---~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
||||+++ +|.+++... ....+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999974 887777531 246789999999999999999999997 7 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhh----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 635 TT--------AAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.. .++..|+|||.+ .+..++.++|||||||++|||+||+.||....... +.......+. .
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~-------~ 247 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLTQVVKGD-------P 247 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSC-------C
T ss_pred cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHHHHhcCC-------C
Confidence 32 345579999998 46678999999999999999999999996432111 1111001110 0
Q ss_pred Cccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 PTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 ~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+.+. ......+.++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1111 111234567899999999999999999999976
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=320.30 Aligned_cols=242 Identities=17% Similarity=0.251 Sum_probs=168.3
Q ss_pred cccc-ccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceE
Q 004124 481 NIIG-SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
.+++ .+|+|+||+||+|+.. +++.||||++.... . ...+....+..++||||+++++++... +....
T Consensus 31 ~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 31 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred EecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 5545 4899999999999976 68899999885321 1 111222345667999999999998752 12247
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCcc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWN 633 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla~ 633 (772)
++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 99999999999999997655567999999999999999999999998 999999999999976 4569999999986
Q ss_pred CCC-------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH--HHHHHHhhcCCCCccccCCc
Q 004124 634 NTT-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE--NWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 634 ~~~-------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 704 (772)
... .++..|+|||.+....++.++|||||||++|||+||+.||........ ........+... ...+
T Consensus 180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~- 255 (336)
T 3fhr_A 180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG---FPNP- 255 (336)
T ss_dssp EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C---CCTT-
T ss_pred eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc---cCch-
Confidence 432 235679999999888899999999999999999999999964332111 000001000000 0000
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.++.+++.+||+.||++|||+.|+++.
T Consensus 256 ---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 ---EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112345678899999999999999999999974
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=308.27 Aligned_cols=226 Identities=18% Similarity=0.302 Sum_probs=175.5
Q ss_pred ccc-cccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHH-hcCCCCcccceeEEEEc--CCCce
Q 004124 481 NII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL-SKVNHKNFVNLIGYCEE--DEPFT 555 (772)
Q Consensus 481 ~ii-g~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L-~~l~HpNIV~l~g~~~~--~~~~~ 555 (772)
.++ +.+|+|+||.||+|+. .+++.||+|.+... ..+.+|++++ +..+||||+++++++.. .+...
T Consensus 20 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 20 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred hhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 444 5689999999999996 46889999988531 3567888887 55699999999999875 12225
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla 632 (772)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 799999999999999997655567999999999999999999999998 999999999999998 789999999987
Q ss_pred cCCCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc---
Q 004124 633 NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ--- 709 (772)
Q Consensus 633 ~~~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--- 709 (772)
.... +..++.++|||||||++|||+||+.||....... .. ......+.......+
T Consensus 168 ~~~~-------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------~~---~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 168 KETT-------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------IS---PGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp EECT-------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCCSSCHHH
T ss_pred cccc-------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------hh---HHHHHHHhhccccCCchh
Confidence 6432 2456789999999999999999999996432110 00 000111111111111
Q ss_pred -HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 710 -ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 -~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 2346789999999999999999999999874
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=315.85 Aligned_cols=235 Identities=18% Similarity=0.350 Sum_probs=189.0
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhh-hHHHHHHHHHHHHhcCC--CCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~-~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~ 555 (772)
+++.+.+|+|+||+||+|+. .+++.||||.+.......... ...+.+.+|++++++++ |+||+++++++...+ .
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~ 122 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--S 122 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--E
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--c
Confidence 47888999999999999985 467889999987543322100 11245778999999996 599999999999877 6
Q ss_pred EEEEEeccCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCcc
Q 004124 556 RMMVFEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~ 633 (772)
.++||||+.+ ++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+||+|||+++
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 7999999976 899999864 356899999999999999999999998 99999999999999 78999999999876
Q ss_pred CCC-------CCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NTT-------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~-------~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .++..|+|||.+.+..+ +.++|||||||++|||+||+.||.... + ...+....
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~----~~~~~~~~-------- 262 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E----IIRGQVFF-------- 262 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H----HHHCCCCC--------
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----h----hhcccccc--------
Confidence 432 34567999999877665 688999999999999999999995321 1 11221111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....++++.+++.+||+.||++|||+.|+++
T Consensus 263 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 ---RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223467889999999999999999999976
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=316.33 Aligned_cols=236 Identities=22% Similarity=0.373 Sum_probs=184.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhh-hhHHHHHHHHHHHHhcC----CCCcccceeEEEEcCCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWS-KNLESQFRKKIDTLSKV----NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~-~~~~~~f~~Ei~~L~~l----~HpNIV~l~g~~~~~~~ 553 (772)
+++.+.+|+|+||.||+|+. .+++.||||++......... ......+.+|++++.++ +||||+++++++...+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~- 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE- 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC-
Confidence 47788899999999999986 46789999998654322111 01223467899999988 8999999999998776
Q ss_pred ceEEEEEec-cCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccC
Q 004124 554 FTRMMVFEY-SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSF 631 (772)
Q Consensus 554 ~~~~LV~Ey-~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGl 631 (772)
..++|||| +++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||+
T Consensus 112 -~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 112 -GFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred -eEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEEcch
Confidence 56899999 789999999864 346899999999999999999999988 99999999999999 889999999998
Q ss_pred ccCCC-------CCCccccchhhhccCCCC-CCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 632 WNNTT-------AAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~-------~~~~~~~aPE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..+. .++|||||||++|||+||+.||... .+ .......
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~----~~~~~~~------- 251 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QE----ILEAELH------- 251 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----HHHTCCC-------
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HH----HhhhccC-------
Confidence 76432 345679999998776664 5899999999999999999999532 11 1111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
++.....++.+++.+||+.||++||++.|+++.
T Consensus 252 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 252 ----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122344678899999999999999999999873
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=322.95 Aligned_cols=235 Identities=19% Similarity=0.261 Sum_probs=178.4
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||.....+++.||||++..... ..+.+|+++|+++ +|||||++++++.+.+ ..++|
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv 96 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIA 96 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEE
Confidence 55677889999996655566789999998864322 1356899999999 8999999999998877 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-----CCCcEEEccccCccC
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-----EDYAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-----~~~~~kLsDFGla~~ 634 (772)
|||++ |+|.+++.... ....+..+..++.||+.||+|||+.+ |+||||||+|||++ ....+||+|||+++.
T Consensus 97 ~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 69999986432 23444556789999999999999998 99999999999994 334688999998764
Q ss_pred CC------------CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004124 635 TT------------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 635 ~~------------~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
.. .++..|+|||.+. ...++.++|||||||++|||+| |+.||....... ... ..+.....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~-~~~~~~~~ 248 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANI-LLGACSLD 248 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHH-HTTCCCCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHH-HhccCCcc
Confidence 32 2567899999986 4677889999999999999999 999985332211 111 11111111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .........+.+++.+||+.||++|||+.||++
T Consensus 249 -~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 -CL-----HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TS-----CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cc-----CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11 112344566889999999999999999999984
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=336.38 Aligned_cols=234 Identities=18% Similarity=0.277 Sum_probs=185.7
Q ss_pred cccccccCccceEEEEEEEEc--CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc---
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF--- 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~--~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~--- 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... ......|.+|++++.+++|||||++++++...+..
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD----AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC----HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 478889999999999999975 588999998764321 23456789999999999999999999999875521
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..|+||||+++++|.+++. ..++|..++.|+.||+.||+|||+.+ |+||||||+|||++.+ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccchh
Confidence 1599999999999998864 26999999999999999999999998 9999999999999986 899999999864
Q ss_pred CC-----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 635 TT-----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 ~~-----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.. .++..|+|||.+.+.. +.++|||||||++|||++|..||..... ..+. . ....
T Consensus 231 ~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~-------------~~~~----~--~~~~ 290 (681)
T 2pzi_A 231 INSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV-------------DGLP----E--DDPV 290 (681)
T ss_dssp TTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-------------SSCC----T--TCHH
T ss_pred cccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-------------cccc----c--cccc
Confidence 33 3567899999987654 8899999999999999999988752110 0000 0 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i 744 (772)
......+.+++.+||+.||++|| +++++...|..+
T Consensus 291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 23446788999999999999999 566677766654
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=333.04 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=194.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC----CCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~----~~~ 554 (772)
+++.+.+|.|+||+||+|.. .+++.||||++.... .....+.|.+|++++++++|||||++++++... ...
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL----SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC----CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 37888999999999999986 468899999876432 233456799999999999999999999987651 122
Q ss_pred eEEEEEeccCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEcccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kLsDFG 630 (772)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+||+++.++. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 5689999999999999986432 236889999999999999999999988 999999999999986654 9999999
Q ss_pred CccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC---CCCcc
Q 004124 631 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE---QPLKD 699 (772)
Q Consensus 631 la~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~---~~~~~ 699 (772)
+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....|........ ....+
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-HHHHSSTTCC------CCSCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-chhhhhhhhhcccchhhhhhh
Confidence 986532 34567899999999999999999999999999999999996431 1111111000000 00000
Q ss_pred ccC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHhhhhc
Q 004124 700 IVD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG-----IAAKLKEITAM 747 (772)
Q Consensus 700 ~~d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-----vl~~L~~i~~~ 747 (772)
... +.........+.++.+++.+||..||++|||+.| ..+.++++...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 1111234557788999999999999999999988 44555555443
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=317.67 Aligned_cols=235 Identities=12% Similarity=0.143 Sum_probs=171.2
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC-Ccccce---------eEE--
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNL---------IGY-- 547 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l---------~g~-- 547 (772)
...+.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+.+++.++| +|...+ ...
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 3456788999999999995 578999999876433222 2224679999999999987 322111 111
Q ss_pred ----------EEcCC---CceEEEEEeccCCCChhhhhhh-----hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEee
Q 004124 548 ----------CEEDE---PFTRMMVFEYSPNGSLFEHLHI-----QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHR 609 (772)
Q Consensus 548 ----------~~~~~---~~~~~LV~Ey~~~GsL~~~L~~-----~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHr 609 (772)
+.... ....+++|+++ +|+|.+++.. .....+++..++.|+.|+++||+|||+.+ |+||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHr 235 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHT 235 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECS
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccC
Confidence 11111 12346777765 6899998842 22345788899999999999999999998 9999
Q ss_pred CCCCCCeEECCCCcEEEccccCccCC------CCCCccccchhhh----------ccCCCCCCCchHHHHHHHHHHHcCC
Q 004124 610 NLQSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELL----------ETSAVDLESNVYSFGTILFEMITGR 673 (772)
Q Consensus 610 DLKp~NILld~~~~~kLsDFGla~~~------~~~~~~~~aPE~~----------~~~~~s~ksDVwSfGvvL~ELltG~ 673 (772)
||||+|||++.++.+||+|||+++.. ..+ ..|+|||.+ ....++.++|||||||++|||+||+
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~ 314 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred CcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999997532 234 789999998 5556888999999999999999999
Q ss_pred CcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004124 674 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738 (772)
Q Consensus 674 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl 738 (772)
.||...... .....++.. ....++++.+++.+||+.||++||++.|++
T Consensus 315 ~Pf~~~~~~------------~~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 315 LPNTDDAAL------------GGSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCCCTTGGG------------SCSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCCcchh------------hhHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999643210 111111110 012346789999999999999999977764
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-33 Score=306.44 Aligned_cols=241 Identities=13% Similarity=0.136 Sum_probs=178.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhcCC---------CCcccceeEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVN---------HKNFVNLIGYC 548 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~---------HpNIV~l~g~~ 548 (772)
++++.+|+|+||+||+|+. +++.||||++....... ......+.+.+|++++++++ |||||++++++
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 6778899999999999998 68999999997654210 11222357888998888885 77777777654
Q ss_pred EcC----------------------------CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh
Q 004124 549 EED----------------------------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600 (772)
Q Consensus 549 ~~~----------------------------~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH 600 (772)
... +....++||||+++|++.+.+.. ..+++..+..|+.||+.||+|||
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 310 02268999999999987777632 56899999999999999999999
Q ss_pred -cCCCCeEeeCCCCCCeEECCCC--------------------cEEEccccCccCCC----CCCccccchhhhccCCCCC
Q 004124 601 -QLTPPIAHRNLQSSSIYLTEDY--------------------AAKISDFSFWNNTT----AAKTGSAAMELLETSAVDL 655 (772)
Q Consensus 601 -~~~~~IvHrDLKp~NILld~~~--------------------~~kLsDFGla~~~~----~~~~~~~aPE~~~~~~~s~ 655 (772)
+.+ |+||||||+|||++.++ .+||+|||+++... .++..|+|||.+.+.. +.
T Consensus 179 ~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 179 ASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp HHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SH
T ss_pred HhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-cc
Confidence 888 99999999999999887 99999999987543 3567899999998665 88
Q ss_pred CCchHHHHHH-HHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004124 656 ESNVYSFGTI-LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 656 ksDVwSfGvv-L~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++||||+|++ .+++++|..||.... ............ .... ...........++++.+|+.+||+.| |+
T Consensus 256 ~~Diwsl~~~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~-~~~~---~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGEYHPYSNVL-WLHYLTDKMLKQ-MTFK---TKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSCCTHHHHH-HHHHHHHHHHHT-CCCS---SCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred ceehhhhhCCCCcccccccCCCcchh-hhhHHHHhhhhh-hccC---cccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 9999998777 788889999984210 000111111111 1111 11112234567889999999999976 89
Q ss_pred HHHH
Q 004124 735 RGIA 738 (772)
Q Consensus 735 ~evl 738 (772)
.|++
T Consensus 326 ~e~l 329 (336)
T 2vuw_A 326 TDLL 329 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8887
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-27 Score=271.45 Aligned_cols=181 Identities=13% Similarity=0.082 Sum_probs=125.1
Q ss_pred cCccceEEEEEEE-EcCCcEEEEEEeeecccc-----hhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceEEE
Q 004124 486 FSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRA-----DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 486 lg~G~fG~Vykg~-~~~~~~vaVK~~~~~~~~-----~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
.+.|+.|.+++++ .-.|..++||.+...... ...+...++|.+|+++|+++ .|+||+++++++++++ ..||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~yL 319 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SGWL 319 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EEEE
Confidence 3445555555544 335788999988654211 12234456799999999999 7999999999999887 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
||||++||+|.++|.. ...++.. +|+.||+.||+|+|+++ ||||||||+|||+++++++||+|||+++....
T Consensus 320 VMEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EEECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EEecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999999953 3456653 58999999999999999 99999999999999999999999999875432
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
++..|+|||.+.+ .+..++|+||+|++++++.++..++
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3457899999864 5678899999999999887765443
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=248.99 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=139.8
Q ss_pred cccCccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+.+|+|+||+||+|+. .+..+++|+...+.... ......++|.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 4678999999999954 46788888765543221 11223466899999999999999997666666655 459999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~--- 637 (772)
||+++|+|.+++.. +..|+.|+++||+|||+++ |+||||||+|||+++ ++||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999853 5689999999999999998 999999999999999 999999999875433
Q ss_pred -------------CCccccchhhhcc--CCCCCCCchHHHHHHHHHHHcCCCcc
Q 004124 638 -------------AKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 638 -------------~~~~~~aPE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
++..|+|||.+.. ..|+.++|+||..+-.+|.+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3457899999876 66888899999999999998887776
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=223.06 Aligned_cols=160 Identities=27% Similarity=0.459 Sum_probs=148.4
Q ss_pred cCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCc--eeeEEeCC----CcEEEEEecCCCCcc--cCchhhc
Q 004124 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCS--WFGVECSD----GKVVILNLRDLCLGG--MLAPELG 190 (772)
Q Consensus 119 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~--w~Gv~C~~----~~v~~l~L~~~~l~G--~ip~~l~ 190 (772)
.|.++|+.||++||+++. ||. .+.+|+.+ .+||. |.||+|+. ++|+.|+|++++++| .+|+.++
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~ 73 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHh
Confidence 488899999999999984 565 78999643 47998 99999974 799999999999999 9999999
Q ss_pred CCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCE
Q 004124 191 QLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISE 269 (772)
Q Consensus 191 ~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~ 269 (772)
++++|++|+|++ |++.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|.++|.+|..+..+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 999999999995 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCccccccc
Q 004124 270 IQVDESWLTNAASRASC 286 (772)
Q Consensus 270 l~l~~N~l~g~~p~~~~ 286 (772)
|+|++|.++|.+|....
T Consensus 154 L~L~~N~l~~~~p~~l~ 170 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYG 170 (313)
T ss_dssp EECCSSCCEEECCGGGG
T ss_pred EECcCCcccCcCCHHHh
Confidence 99999999999987543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=207.69 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=124.3
Q ss_pred ccccccccCccceEEEEEEEEcCCcEEEEEEeeecccc-------------hhhhhHHHHHHHHHHHHhcCCCCccccee
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-------------DWSKNLESQFRKKIDTLSKVNHKNFVNLI 545 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~-------------~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~ 545 (772)
++.+.+.+|+|+||.||+|+..+|+.||+|.+...... .|.......+.+|+++|++++ | ++++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 34567889999999999999977999999998643211 011123567999999999999 5 7777
Q ss_pred EEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004124 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 546 g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
+++..+ ..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+|
T Consensus 168 ~~~~~~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 168 KVYAWE---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp CEEEEE---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEE
T ss_pred eEEecc---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEE
Confidence 766543 3489999999999988 421 123469999999999999998 99999999999999 99999
Q ss_pred EccccCccCCCCCCccccchhhhcc----------CCCCCCCchHH
Q 004124 626 ISDFSFWNNTTAAKTGSAAMELLET----------SAVDLESNVYS 661 (772)
Q Consensus 626 LsDFGla~~~~~~~~~~~aPE~~~~----------~~~s~ksDVwS 661 (772)
|+|||+++.. ..+.|||.+.. .+|..++|+|.
T Consensus 233 l~DFG~a~~~----~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 233 IIDFPQSVEV----GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp ECCCTTCEET----TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEECCCCeEC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999998754 34678887642 45566677765
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=235.54 Aligned_cols=159 Identities=23% Similarity=0.299 Sum_probs=117.0
Q ss_pred hccCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeCCCcEEEEEecCCCCccc---Cch------
Q 004124 117 LARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGM---LAP------ 187 (772)
Q Consensus 117 ~~~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~~~~v~~l~L~~~~l~G~---ip~------ 187 (772)
++++.++|+.||++||+++. ||. .+++|+.+ .+||+|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~------~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWSSN------KNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT------SCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC------CCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccC
Confidence 34456789999999999996 777 89999732 48999999999989999999999999998 665
Q ss_pred -----------------hhcCCCCCCEEEcccCcCcccCch--hhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEEE
Q 004124 188 -----------------ELGQLSELKSIILRNNSFFGTIPK--EIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTLL 247 (772)
Q Consensus 188 -----------------~l~~l~~L~~L~L~~N~l~G~iP~--~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L~ 247 (772)
.++.+++|++|+|++|.++|.+|. .+++|++|++|||++|.++|.+|..+ +++++|++|+
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 455566777777777777777776 67777777777777777777776655 6666777777
Q ss_pred CccCCCcccCChh---hcCCCCCCEEEcCCCCCCCcccc
Q 004124 248 LDNNQYLGGISPE---LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~---~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++|+++|.+|.. +.++++|++|++++|.++|.+|.
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc
Confidence 7777776666655 55566666666666666555443
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-21 Score=229.29 Aligned_cols=157 Identities=22% Similarity=0.271 Sum_probs=140.8
Q ss_pred ChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCC--Cce------------eeEEeC-CCcEEEEEecCCCCcccC
Q 004124 121 LNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNP--CSW------------FGVECS-DGKVVILNLRDLCLGGML 185 (772)
Q Consensus 121 ~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~--C~w------------~Gv~C~-~~~v~~l~L~~~~l~G~i 185 (772)
..+|+.||++||+++. +| +|+.+++| ...+| |.| .||+|+ .++|+.|+|++++|+|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCc-ccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 4579999999999984 44 89765422 12355 999 999998 589999999999999999
Q ss_pred chhhcCCCCCCEEEc-ccCcCccc--------------------------------------------------------
Q 004124 186 APELGQLSELKSIIL-RNNSFFGT-------------------------------------------------------- 208 (772)
Q Consensus 186 p~~l~~l~~L~~L~L-~~N~l~G~-------------------------------------------------------- 208 (772)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88877666
Q ss_pred --------------------CchhhcCCCCCCEeeccCCcCcc-----------------cCCcccC--CCCCCCEEECc
Q 004124 209 --------------------IPKEIGELKELEILDLGFNNFSG-----------------PFPSDFG--NSFSLTTLLLD 249 (772)
Q Consensus 209 --------------------iP~~l~~l~~L~~L~ls~N~l~G-----------------~iP~~l~--~l~~L~~L~l~ 249 (772)
||..++++++|+.|+|++|+|+| .||..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 89999999999999999999999 4999998 99999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCC-CCC-ccccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESW-LTN-AASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~-l~g-~~p~~ 284 (772)
+|++.|.+|..++++++|+.|+|++|. ++| .+|..
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~ 536 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH
Confidence 999999999999999999999999998 999 88863
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-20 Score=221.59 Aligned_cols=156 Identities=21% Similarity=0.278 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHHhccCCCC-------CCCCCCCCCCCCCCCCCCCce---eeEEeC-CCcEEEEEecCCCCcccCchhhc
Q 004124 122 NSEGMALLRFRERVVRDPF-------GALSKWSDNDGVGDNVNPCSW---FGVECS-DGKVVILNLRDLCLGGMLAPELG 190 (772)
Q Consensus 122 ~~~~~aLl~~k~~~~~~~~-------~~l~~W~~~~~~~~~~~~C~w---~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~ 190 (772)
..|+.||.+++.++..+.- ....+|+ .+.+||.| .||+|+ .++|+.|+|++++++|.+|++++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHh
Confidence 4689999999998753211 1122454 34689999 999997 47999999999999999999999
Q ss_pred CCCCCCEEEcccC-------------------------------------------------------------------
Q 004124 191 QLSELKSIILRNN------------------------------------------------------------------- 203 (772)
Q Consensus 191 ~l~~L~~L~L~~N------------------------------------------------------------------- 203 (772)
+|++|++|+|++|
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 9999999999988
Q ss_pred -----------cCcccCchhhcCCCCCCEeeccCCcCccc-----------------CCcccC--CCCCCCEEECccCCC
Q 004124 204 -----------SFFGTIPKEIGELKELEILDLGFNNFSGP-----------------FPSDFG--NSFSLTTLLLDNNQY 253 (772)
Q Consensus 204 -----------~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-----------------iP~~l~--~l~~L~~L~l~~N~~ 253 (772)
+++| ||..++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 4456 999999999999999999999997 999999 999999999999999
Q ss_pred cccCChhhcCCCCCCEEEcCCCC-CCC-ccccc
Q 004124 254 LGGISPELHVLKVISEIQVDESW-LTN-AASRA 284 (772)
Q Consensus 254 ~G~iP~~~~~l~~L~~l~l~~N~-l~g-~~p~~ 284 (772)
.|.+|..++++++|+.|+|++|. ++| .+|..
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~ 294 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDD 294 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHH
Confidence 99999999999999999999998 999 88874
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-19 Score=191.18 Aligned_cols=160 Identities=17% Similarity=0.224 Sum_probs=141.2
Q ss_pred cCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeC----------CCcEEEEEecCCCCcccCchh
Q 004124 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS----------DGKVVILNLRDLCLGGMLAPE 188 (772)
Q Consensus 119 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~----------~~~v~~l~L~~~~l~G~ip~~ 188 (772)
.+..+|+.||++||..+..|+.+.+++|.... ....++|.|.|+.|. ..+|+.|+|++|++. .+|+.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~--~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN--SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT--TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc--cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 35678999999999998777777778884211 113578999999995 268999999999998 89999
Q ss_pred hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcC-----
Q 004124 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHV----- 263 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~----- 263 (772)
++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|++.|.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 99999999999999999999999 89999999999999999999999999998765
Q ss_pred ----CCCCCEEEcCCCCCCCccccc
Q 004124 264 ----LKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 264 ----l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+++|+.|+|++|.++ .+|..
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGG
T ss_pred hhccCCCCCEEECcCCCcC-cchHh
Confidence 999999999999999 77764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-18 Score=176.89 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=105.0
Q ss_pred cccccccCccceEEEEEEEE-cCCcE--EEEEEeeecccchh-------------------hhhHHHHHHHHHHHHhcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVE--IAVTSTSVKSRADW-------------------SKNLESQFRKKIDTLSKVN 537 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~--vaVK~~~~~~~~~~-------------------~~~~~~~f~~Ei~~L~~l~ 537 (772)
+++.+.+|.|+||.||+|.. .+|+. ||||++........ .......+.+|+++|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999997 68888 99998654311100 1122346889999999998
Q ss_pred CCcc--cceeEEEEcCCCceEEEEEeccCC-C----ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh-cCCCCeEee
Q 004124 538 HKNF--VNLIGYCEEDEPFTRMMVFEYSPN-G----SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHR 609 (772)
Q Consensus 538 HpNI--V~l~g~~~~~~~~~~~LV~Ey~~~-G----sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH-~~~~~IvHr 609 (772)
|+++ ..++++ . ..+|||||+.+ | +|.++... .++.....++.|++.||+||| +++ |+||
T Consensus 129 ~~~i~~p~~~~~--~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHr 195 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE--LVHA 195 (258)
T ss_dssp HTTCCCCCEEEE--E----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC--EECS
T ss_pred hCCCCCCeEEEc--C----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC--EEeC
Confidence 8864 333332 2 34899999942 4 55554321 123456789999999999999 888 9999
Q ss_pred CCCCCCeEECCCCcEEEccccCccCC
Q 004124 610 NLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 610 DLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
||||+|||+++ .++|+|||++...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999998654
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-15 Score=148.06 Aligned_cols=125 Identities=22% Similarity=0.259 Sum_probs=114.8
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|+.+.|++ ..++.|+|++|.+++..+. .+..+++|++|+|++|.+++.+|..+.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 7899999963 2678999999999886665 389999999999999999999999999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++++..|..++++++|++|+|++|+++|.+|..+..+++|+.|+|++|.|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999998888899999999999999999999999999999999999999999987654
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=163.20 Aligned_cols=142 Identities=8% Similarity=0.072 Sum_probs=99.7
Q ss_pred ccccccccCccceEEEEEEEEcCCcEEEEEEeeecccc--------h---------hhhhHHHHHHHHHHHHhcCCCCcc
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA--------D---------WSKNLESQFRKKIDTLSKVNHKNF 541 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~--------~---------~~~~~~~~f~~Ei~~L~~l~HpNI 541 (772)
.+++.+.||.|+||.||+|...+|+.||||+++..... + +....+....+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45788999999999999999999999999986532110 0 000011112456677777754443
Q ss_pred cceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004124 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 542 V~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
....-+.... .+|||||+++++|..+... .....++.|++.+|.|||+++ ||||||||.|||++++
T Consensus 176 ~vp~p~~~~~----~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQSR----HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEET----TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEE
T ss_pred CCCeeeeccC----ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCC
Confidence 3222222221 2799999999888765421 123467899999999999998 9999999999999877
Q ss_pred C----------cEEEccccCccC
Q 004124 622 Y----------AAKISDFSFWNN 634 (772)
Q Consensus 622 ~----------~~kLsDFGla~~ 634 (772)
+ .+.|+||+-+-.
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCcccccccccceEEEEeCCccc
Confidence 6 389999996543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=148.47 Aligned_cols=125 Identities=22% Similarity=0.286 Sum_probs=111.1
Q ss_pred CCCCceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeec
Q 004124 156 VNPCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224 (772)
Q Consensus 156 ~~~C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~l 224 (772)
...|+|++|.|++ ..++.|+|++|.+++..|..+..+++|++|+|++|.+.+..+..+..+++|+.|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 3579999999973 25789999999999988888999999999999999996544556789999999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|.+++-.|..+..+++|++|+|++|+++ .||..+..+++|+.|+|++|.+++-.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 999999766666899999999999999998 89999999999999999999999643
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-15 Score=180.57 Aligned_cols=111 Identities=29% Similarity=0.472 Sum_probs=105.8
Q ss_pred EEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCC
Q 004124 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQY 253 (772)
Q Consensus 174 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~ 253 (772)
+++..+.++|.+|+.++.++.|++|||++|.++|.||.+++++++|+.|||++|+++|.||..++++++|+.|||++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 254 LGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 254 ~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+|.||..++.++.|++|+|++|.|+|.||..
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 9999999999999999999999999999964
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.5e-14 Score=138.63 Aligned_cols=125 Identities=21% Similarity=0.215 Sum_probs=108.4
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+++.|++ ..++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..++.+++|+.|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 7899999963 25789999999999765566799999999999999999766667899999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.+++..|..++++++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99987666789999999999999999854444468899999999999999998764
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=138.20 Aligned_cols=124 Identities=20% Similarity=0.255 Sum_probs=107.8
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|.+|.|.. .+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 7899999963 25889999999999765556889999999999999999665666789999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.+++..+..++++++|++|+|++|++++-.+..+..+++|+.|+|++|.+++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 9997666668999999999999999997666668999999999999999996443
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-14 Score=153.72 Aligned_cols=117 Identities=21% Similarity=0.388 Sum_probs=111.1
Q ss_pred CcEEEEEecC-CCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRD-LCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~-~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..++.|+|++ |.+.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|.++|.+|..++++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 3578899995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCcccCChhhcCCC-CCCEEEcCCCCCCCcccccc
Q 004124 248 LDNNQYLGGISPELHVLK-VISEIQVDESWLTNAASRAS 285 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~-~L~~l~l~~N~l~g~~p~~~ 285 (772)
|++|.++|.+|..++.+. .|+.|+|++|.++|.+|...
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~ 194 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGG
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHH
Confidence 999999999999999998 99999999999999888753
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=140.44 Aligned_cols=125 Identities=19% Similarity=0.173 Sum_probs=111.9
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|..+.|++. .++.|+|++|.+++..+.. +..+++|++|+|++|.+++..|..+.++++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 78999999632 4678999999999876654 78999999999999999988888899999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|.+++..|..++++++|++|+|++|.+++-.|..+..+++|+.|+|++|.+++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 999988787899999999999999999999899999999999999999999986664
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.7e-13 Score=138.91 Aligned_cols=124 Identities=23% Similarity=0.226 Sum_probs=111.2
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|..|.|.+ ..++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 7899999963 25789999999999876668999999999999999999999999999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.+++-.+..+.++++|++|+|++|.+++-.|..+..+++|+.|+|++|.+++..+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 9995434446889999999999999999989999999999999999999997544
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-13 Score=141.16 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=69.1
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 45666666666665555666666666666666666665555566666666666666666655455556666666666666
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
|.+++-.|..+..+++|+.|+|++|.+++
T Consensus 117 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 66664444445666666666666666664
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-13 Score=146.40 Aligned_cols=114 Identities=22% Similarity=0.270 Sum_probs=86.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.++ .+|..++.+++|++|+|++|.+++ +|+.++.+++|+.|+|++|++.|.+|..++++++|+.|+|
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 35667777777777 677777777777777777777774 6666777777777777777777777777777777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++|++.|.+|..+..+++|+.|+|++|.+.|.+|..
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~ 296 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH
Confidence 777777777777777777777777777777777764
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.4e-13 Score=131.93 Aligned_cols=122 Identities=23% Similarity=0.224 Sum_probs=103.9
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|..+.|++ ..++.|+|++|.++ .+|..+..+++|++|+|++|.+++..|..+.++++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6788888863 25788999999987 68888999999999999999999877788999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
.+++-.|..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|.++...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999877778899999999999999988655556788999999999999887643
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-13 Score=164.85 Aligned_cols=107 Identities=23% Similarity=0.356 Sum_probs=64.1
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.|+|++|.+. .||+.++.+++|++|+|++|.|+ .||..+++|++|++|||++|.|+ .||..++++++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 4455555554 45555556666666666666665 56666666666666666666666 556666666666666666665
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 253 YLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++ .||..++.+++|+.|+|++|.|+|.+|.
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 53 5565666666666666666666665554
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.4e-13 Score=135.30 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=107.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 46889999999999977778999999999999999999988888999999999999999999999999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999998755
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-13 Score=128.16 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=101.7
Q ss_pred CcEEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.++ |.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|.+++.+|..++++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 35779999999998 89999899999999999999999976 7789999999999999999999998888899999999
Q ss_pred CccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 248 LDNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|.+++ ..|..+..+++|+.|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999988 456889999999999999999987543
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5e-13 Score=154.03 Aligned_cols=125 Identities=24% Similarity=0.251 Sum_probs=113.6
Q ss_pred CCceeeEEeCC-------------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeec
Q 004124 158 PCSWFGVECSD-------------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224 (772)
Q Consensus 158 ~C~w~Gv~C~~-------------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~l 224 (772)
.|.|.|+ |+. ..++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..++++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 852 26889999999999988889999999999999999999988899999999999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|+.|++++|.+.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 9999998877779999999999999999987 6788899999999999999997777774
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=9.3e-13 Score=148.03 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=114.6
Q ss_pred CCCceee--EEeCC----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEee
Q 004124 157 NPCSWFG--VECSD----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILD 223 (772)
Q Consensus 157 ~~C~w~G--v~C~~----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ 223 (772)
..|.|.+ |.|.+ .+++.|+|++|.+.+..|..+.++++|++|+|++|.+.+.+| ..+.++++|++||
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4577777 88973 358899999999999889999999999999999999998885 5689999999999
Q ss_pred ccCCcCcccCCcccCCCCCCCEEECccCCCcccCChh--hcCCCCCCEEEcCCCCCCCcccc
Q 004124 224 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 224 ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~--~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++|.+++..|..++++++|++|+|++|.++|.+|.. +..+++|+.|+|++|.+++..|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc
Confidence 9999999999999999999999999999999987776 89999999999999999987765
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-12 Score=134.06 Aligned_cols=120 Identities=19% Similarity=0.213 Sum_probs=61.2
Q ss_pred CCCceeeEEeC-CCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc
Q 004124 157 NPCSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS 235 (772)
Q Consensus 157 ~~C~w~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~ 235 (772)
+.|.|.|+.|. .+.++.++++++++.. ||..+. +.|+.|+|++|.+++..+..++++++|++|+|++|.++.-.+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 56888888774 2333455555555553 444332 3455555555555543334455555555555555555532222
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 236 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 123 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS 123 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe
Confidence 23445555555555555544333334455555555555555554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=122.93 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=92.5
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.++++++.|.. +|..+. +.|++|+|++|.+++..|..++++++|++|+|++|++++-.|..+.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 34556666665 776663 899999999999999889999999999999999999997655567999999999999999
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 253 YLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++-.|..+..+++|+.|+|++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 998666679999999999999999997654
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-12 Score=150.08 Aligned_cols=108 Identities=23% Similarity=0.237 Sum_probs=101.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.|++ +|. ++.+++|+.|+|++|.++ .||..++++++|+.|+|++|.+++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 36689999999998 776 999999999999999999 899999999999999999999998 88 89999999999999
Q ss_pred cCCCcccC-ChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 250 NNQYLGGI-SPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 250 ~N~~~G~i-P~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+|++++.+ |..++.+++|+.|+|++|.+++..|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999987 9999999999999999999998655
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.32 E-value=6e-13 Score=156.54 Aligned_cols=124 Identities=14% Similarity=0.171 Sum_probs=114.4
Q ss_pred CCceeeEEeC---CCcEEEEEecCCCCccc-----------------Cchhhc--CCCCCCEEEcccCcCcccCchhhcC
Q 004124 158 PCSWFGVECS---DGKVVILNLRDLCLGGM-----------------LAPELG--QLSELKSIILRNNSFFGTIPKEIGE 215 (772)
Q Consensus 158 ~C~w~Gv~C~---~~~v~~l~L~~~~l~G~-----------------ip~~l~--~l~~L~~L~L~~N~l~G~iP~~l~~ 215 (772)
+++..|+.-. -.+++.|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..+++
T Consensus 192 ~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 192 SNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred cCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4567774321 25788999999999997 999999 9999999999999999999999999
Q ss_pred CCCCCEeeccCCc-Ccc-cCCcccCCC------CCCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004124 216 LKELEILDLGFNN-FSG-PFPSDFGNS------FSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 216 l~~L~~L~ls~N~-l~G-~iP~~l~~l------~~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|+.|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .||. .++.+++|+.|+|++|.++|.+|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 9999999999998 999 999999887 99999999999999 9999 99999999999999999999998
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.6e-12 Score=125.51 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=99.7
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
..+++++++| +.||..+.. .|++|+|++|.+++..|. .++++++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4789999999 568887654 899999999999877665 489999999999999999999999999999999999999
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
|++++-.|..+..+++|+.|+|++|.+++.+|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 121 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS 121 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH
Confidence 9999998888999999999999999999877754
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.1e-12 Score=121.77 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=93.3
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccC
Q 004124 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N 251 (772)
+.++++++.| +.||..+. ++|++|+|++|.+++..|..++++++|++|+|++|+|++-.+..+.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3678888888 56888765 89999999999999998999999999999999999999844445689999999999999
Q ss_pred CCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 252 QYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 252 ~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++++-.+..+..+++|+.|+|++|.++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999655555899999999999999998654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=125.63 Aligned_cols=112 Identities=20% Similarity=0.165 Sum_probs=99.0
Q ss_pred CcEEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+. |.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45779999999998 88998889999999999999999876 7789999999999999999998888888899999999
Q ss_pred CccCCCccc-CChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 248 LDNNQYLGG-ISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G~-iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|.+++- .+..+..+++|+.|++++|.+++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 999999873 33788999999999999999986543
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.30 E-value=8e-12 Score=130.79 Aligned_cols=114 Identities=19% Similarity=0.204 Sum_probs=80.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|+.|++
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 35667777777777655555677777777777777777666666677777777777777777655555677777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..|
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 7777776555556777777777777777776544
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.30 E-value=9.4e-12 Score=128.57 Aligned_cols=114 Identities=23% Similarity=0.202 Sum_probs=100.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++-.|..+.++++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 46889999999999977777899999999999999999777778899999999999999999766666789999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 9999987666678999999999999999996544
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.29 E-value=9.7e-12 Score=124.47 Aligned_cols=114 Identities=18% Similarity=0.112 Sum_probs=100.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 46889999999999755555789999999999999999766667899999999999999999866667899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++-.+..+..+++|+.|+|++|.+++..|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999997666668899999999999999998765
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=7.6e-12 Score=146.11 Aligned_cols=128 Identities=17% Similarity=0.109 Sum_probs=109.5
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCE
Q 004124 157 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 221 (772)
Q Consensus 157 ~~C~w~----Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~ 221 (772)
+||.+. .|.|.+ ..++.|+|++|.+++-.+..+.++++|++|+|++|.+++-.|..+.+|++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 467653 578963 25789999999999876778999999999999999999877778999999999
Q ss_pred eeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004124 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 222 L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
|+|++|++++-.|..+.++++|++|+|++|++++-.+..++++++|+.|+|++|.+++ .+|..
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 9999999997656678999999999999999998666678999999999999999976 34543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.29 E-value=7.6e-12 Score=126.79 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=102.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++..|..+..+++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++..|..+.++++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 46889999999999988999999999999999999999544445788999999999999999988999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++-.+..+..+++|+.|+|++|.++..
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988777899999999999999998764
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.29 E-value=8.2e-12 Score=135.31 Aligned_cols=109 Identities=18% Similarity=0.145 Sum_probs=94.4
Q ss_pred CceeeEEeCCCcEEEEEecCC-CCcccCchhhcCCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcc
Q 004124 159 CSWFGVECSDGKVVILNLRDL-CLGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 159 C~w~Gv~C~~~~v~~l~L~~~-~l~G~ip~~l~~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
|.|..|.|. ++ +|.+ ||. |..+++|+.|+|++ |.|++..|..+++|++|+.|+|++|+|+|..|..
T Consensus 8 C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 888888885 34 5665 888 99999999999996 9999988889999999999999999999988889
Q ss_pred cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 237 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
|+++++|+.|+|++|+|++ +|+.+.....|+.|+|.+|.|...
T Consensus 76 ~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp GGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCEEECCSSCCCCC
T ss_pred hcCCcCCCEEeCCCCccce-eCHHHcccCCceEEEeeCCCccCC
Confidence 9999999999999999996 555444333499999999999864
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=126.51 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=101.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++-.+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 46889999999996544455789999999999999999776777899999999999999999 89999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.+..+..+++|+.|+|++|.+++..+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999997666678999999999999999998765
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=143.80 Aligned_cols=128 Identities=20% Similarity=0.160 Sum_probs=110.9
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCE
Q 004124 157 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 221 (772)
Q Consensus 157 ~~C~w~----Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~ 221 (772)
+||.|. .|.|.+ .+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 567763 678853 36889999999999988888999999999999999999888888999999999
Q ss_pred eeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004124 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 222 L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++++|++|+|++|.+++ .+|..
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~ 148 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY 148 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHh
Confidence 9999999999889999999999999999999988777788999999999999999886 56764
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-11 Score=128.35 Aligned_cols=113 Identities=22% Similarity=0.172 Sum_probs=98.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+.+ + +.+..+++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|++
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 468899999999988 3 47899999999999999999877777899999999999999999877777899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++-.|..+..+++|+.|++++|.+++..+.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 99999976666678999999999999999965443
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=3.2e-11 Score=126.17 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=98.7
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 47889999999988776688899999999999999987777788899999999999999998877888899999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
+|.+++-.+..+..+++|+.|++++|.+++ .+|..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchh
Confidence 999888766678889999999999999886 34553
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=134.79 Aligned_cols=124 Identities=19% Similarity=0.207 Sum_probs=109.5
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|..+.|.+ ..++.|+|++|.+++..+..+. .+++|++|+|++|.+++..|..+.++++|++|||++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788899963 2467899999999987666676 899999999999999988788899999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++++-.|..+.++++|+.|+|++|++++-.|..+..+++|+.|+|++|.+++ +|.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~ 153 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPV 153 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCG
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCH
Confidence 99998777778999999999999999998888899999999999999999996 444
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=137.45 Aligned_cols=112 Identities=19% Similarity=0.134 Sum_probs=93.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.++|++|.+.+.+|..++.+++|++|+|++|.+++..|..++++++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 45778888888888888888888888888888888888888888888888888888888888777778888888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++..|..+..+++|+.|+|++|.+++.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccC
Confidence 88888888888888888888888888888863
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-11 Score=140.29 Aligned_cols=122 Identities=19% Similarity=0.109 Sum_probs=99.0
Q ss_pred CCceeeEEeCC-CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCc
Q 004124 158 PCSWFGVECSD-GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPS 235 (772)
Q Consensus 158 ~C~w~Gv~C~~-~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~ 235 (772)
.|.+.++.|.. ..+..|+|++|.++|..|..++.+++|++|+|++|.++|.+|..+. ++++|+.|+|++|.+++. |
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~- 185 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K- 185 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-
Confidence 36677777753 5788889999999888888888888999999999999888888776 788999999999998876 3
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 236 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.+..+++|+.|+|++|.++| +|+.+..+++|+.|+|++|.+++ +|.
T Consensus 186 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 186 GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cch
Confidence 34468889999999998887 55568888899999999998885 554
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.8e-12 Score=153.60 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=111.5
Q ss_pred CCceeeEEeC---CCcEEEEEecCCCCcc-----------------cCchhhc--CCCCCCEEEcccCcCcccCchhhcC
Q 004124 158 PCSWFGVECS---DGKVVILNLRDLCLGG-----------------MLAPELG--QLSELKSIILRNNSFFGTIPKEIGE 215 (772)
Q Consensus 158 ~C~w~Gv~C~---~~~v~~l~L~~~~l~G-----------------~ip~~l~--~l~~L~~L~L~~N~l~G~iP~~l~~ 215 (772)
.|...|+.-. -.+++.|+|++|.|+| .||+.++ ++++|++|+|++|.+.|.+|..+++
T Consensus 434 ~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 434 TNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred cCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 3567775322 2578999999999999 4999988 9999999999999999999999999
Q ss_pred CCCCCEeeccCCc-Ccc-cCCcccCCCC-------CCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004124 216 LKELEILDLGFNN-FSG-PFPSDFGNSF-------SLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 216 l~~L~~L~ls~N~-l~G-~iP~~l~~l~-------~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .||. .++++++|+.|+|++|.++ .+|
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 9999999999998 999 9998777665 9999999999999 9999 9999999999999999999 888
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=121.87 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=93.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+ ..++.+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..++.+++|++|++
T Consensus 66 ~~L~~L~l~~n~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCC--SCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCC--CcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 3577889988854 34457888999999999999999888888999999999999999999888888999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+.+.+| .+..+++|+.|++++|.+++
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9998777787 68889999999999999886
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.2e-11 Score=140.69 Aligned_cols=113 Identities=16% Similarity=0.163 Sum_probs=71.4
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..++++++.+++-.+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 34566666665443333356667777777777777766666667777777777777777765555666777777777777
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|.+++-.|..++.+++|+.|+|++|.+++..|.
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 766633222346667777777777776665543
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-11 Score=149.78 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=78.5
Q ss_pred CceeeEEeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccC-chhhcCCCCCCEeeccCCcCcccCCccc
Q 004124 159 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTI-PKEIGELKELEILDLGFNNFSGPFPSDF 237 (772)
Q Consensus 159 C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~i-P~~l~~l~~L~~L~ls~N~l~G~iP~~l 237 (772)
|+|+.|.+-..+++.|+|++|.+++..|..+.++++|++|+|++|.+.+.| |..++++++|++|+|++|.+++..|..+
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 455555553346667777777777666666666666666666666666666 4556666666666666666666666666
Q ss_pred CCCCCCCEEECccCCCcccCChh--hcCCCCCCEEEcCCCCCCCcc
Q 004124 238 GNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~iP~~--~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+++++|++|+|++|.+++.+|.. +.++++|+.|+|++|.+++..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc
Confidence 66666666666666666655554 566666666666666666543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.1e-12 Score=144.59 Aligned_cols=112 Identities=26% Similarity=0.318 Sum_probs=99.6
Q ss_pred CCCC-----ceeeE-EeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcC
Q 004124 156 VNPC-----SWFGV-ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229 (772)
Q Consensus 156 ~~~C-----~w~Gv-~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l 229 (772)
.++| .|.|+ .|..++++.|+|++|+|++ ||+.+. ++|++|+|++|.|+ .|| ..+++|+.|+|++|+|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l 112 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRL 112 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCC
T ss_pred CCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCC
Confidence 3577 79999 7877789999999999998 888774 89999999999999 788 5689999999999999
Q ss_pred cccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 230 ~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++ ||. +.+ +|++|+|++|.+++ ||. .+++|+.|+|++|.+++ +|.
T Consensus 113 ~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 113 ST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp SC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred CC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC
Confidence 98 888 766 99999999999998 887 68999999999999997 665
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.8e-11 Score=128.66 Aligned_cols=110 Identities=17% Similarity=0.145 Sum_probs=60.1
Q ss_pred cEEEEEecCCCCcccCc-hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004124 170 KVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+..|+|++|.+.+..+ ..+..+++|++|+|++|.+.+.+|..+..+++|+.|+|++|.+++ .+|..+..+++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 44555555555554333 345555555555555555555555555555555555555555554 3455555555555555
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
|++|.+++..|..+..+++|+.|+|++|.+++
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 55555555555555555555555555555554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.4e-11 Score=120.65 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=98.2
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|+++.+. .+| .+..+++|++|+|++|.+. .++.+..+++|++|+|++|.+++..|..++.+++|++|+++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 5779999999998 566 7999999999999999654 45589999999999999999999999999999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|.+++..|..+..+++|+.|+|++|.+.+.+|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~ 154 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccHh
Confidence 9999999999999999999999999985555664
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-11 Score=132.93 Aligned_cols=123 Identities=24% Similarity=0.295 Sum_probs=97.0
Q ss_pred CCCceeeEEeC--C-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEee
Q 004124 157 NPCSWFGVECS--D-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILD 223 (772)
Q Consensus 157 ~~C~w~Gv~C~--~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ 223 (772)
.+|.|.|+ |+ + .+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 46999998 64 1 2578889998888875555788889999999999988887788888889999999
Q ss_pred ccCCcCcccCCcc-cCCCCCCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004124 224 LGFNNFSGPFPSD-FGNSFSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 224 ls~N~l~G~iP~~-l~~l~~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|.+++ +|.. ++++++|++|++++|.++ .+|. .+..+++|+.|++++|...+.++
T Consensus 107 Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 107 LSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCCcCCc-CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC
Confidence 99998886 4544 788889999999988887 4565 67888899999998885333443
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.20 E-value=9.6e-12 Score=132.90 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=90.2
Q ss_pred CcEEEEEecCCCCcccCchhh--cCCCCCCEEEcccCcCcccCchhhcCC-----CCCCEeeccCCcCcccCCcccCCCC
Q 004124 169 GKVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFGNSF 241 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~N~l~G~iP~~l~~l-----~~L~~L~ls~N~l~G~iP~~l~~l~ 241 (772)
.+++.|+|++|.++|.+|..+ ..+++|++|+|++|.+++. |..++.+ ++|++|+|++|.+++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 357788888888888888876 7888888888888888877 7777766 8888888888888887778888888
Q ss_pred CCCEEECccCCCccc--CChhh--cCCCCCCEEEcCCCCCCC
Q 004124 242 SLTTLLLDNNQYLGG--ISPEL--HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 242 ~L~~L~l~~N~~~G~--iP~~~--~~l~~L~~l~l~~N~l~g 279 (772)
+|++|+|++|++.|. +|+.+ ..+++|+.|+|++|.+++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 888888888888876 34555 788888888888888884
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.1e-11 Score=125.30 Aligned_cols=113 Identities=19% Similarity=0.103 Sum_probs=101.1
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc-CcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN-FSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~-l~G~iP~~l~~l~~L~~L~l 248 (772)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|. +.+..|..+.++++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 57899999999998777789999999999999999998889999999999999999998 66655788999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++..|..+..+++|++|++++|.+++..+
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCH
Confidence 9999998888889999999999999999986443
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.5e-11 Score=124.39 Aligned_cols=114 Identities=15% Similarity=0.137 Sum_probs=105.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+.++++|+.|++++|.+++..+..++++++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46889999999999877778999999999999999999988889999999999999999999877778999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++ .+|..+..+++|+.|+|++|.+++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 9999987 689999999999999999999997544
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5.3e-11 Score=125.15 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=64.7
Q ss_pred cEEEEEecCCC-CcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLC-LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..|+|++|. +.+..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++..+..++++++|++|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 45556666665 44333445556666666666666666555555566666666666666665544444555666666666
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++-.+..+..+++|+.|+|++|.+++..|.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 66665544334455566666666666666554443
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=8.4e-11 Score=116.54 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=94.7
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.++++++++. .||..+. +.|++|+|++|.++ .+|..+.++++|+.|+|++|.+++-.|..+.++++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 5789999887 5776654 68999999999998 799999999999999999999998878889999999999999999
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 253 YLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+++-.|..+..+++|+.|+|++|.+++-
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~ 117 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVV 117 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCee
Confidence 9998888899999999999999999953
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.5e-11 Score=138.69 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=106.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 46889999999999988888999999999999999999988999999999999999999999877788999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++ .+|..++++++|++|+|++|.+++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999986 8899999999999999999999986554
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=6.9e-11 Score=133.73 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=110.6
Q ss_pred ceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc
Q 004124 160 SWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228 (772)
Q Consensus 160 ~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~ 228 (772)
.|..|.|.+ ..++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 377888863 257799999999999888899999999999999999999889999999999999999999
Q ss_pred CcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 229 l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+++-.+..++++++|++|+|++|.+++..|..+..+++|+.|+|++|.+++..|.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 9965555688999999999999999999999999999999999999999876554
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-11 Score=115.80 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=94.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+.+. ..++.+++|++|+|++|.+++.+|..++++++|+.|++++|.+++ +.|..++++++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5788999999999886 779999999999999999999999999999999999999999998 4568899999999999
Q ss_pred CccCCCcccCC---hhhcCCCCCCEEEcCC
Q 004124 248 LDNNQYLGGIS---PELHVLKVISEIQVDE 274 (772)
Q Consensus 248 l~~N~~~G~iP---~~~~~l~~L~~l~l~~ 274 (772)
+++|.+++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999998766 5789999999999863
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.17 E-value=4.1e-11 Score=127.35 Aligned_cols=115 Identities=18% Similarity=0.265 Sum_probs=87.7
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcc-cCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG-TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G-~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
++..|+|++|.+.+.++..+..+++|++|+|++|.+.+ .+|..+..+++|+.|+|++|.+++..|..+.++++|+.|+|
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 56677788887777777777777888888888888776 46777777888888888888887777777777778888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++|.+++..+..+..+++|+.|+|++|.+++..|..
T Consensus 207 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp TTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred CCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 888877766666777778888888888877766543
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.17 E-value=3.5e-11 Score=116.05 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=97.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc-CCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+|++|.+++- .+..++.+++|++|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4688999999999886 7899999999999999999999999888999999999999999973 337899999999999
Q ss_pred CccCCCcccCC---hhhcCCCCCCEEEcCCCCCC
Q 004124 248 LDNNQYLGGIS---PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G~iP---~~~~~l~~L~~l~l~~N~l~ 278 (772)
+++|.+++..+ ..+..+++|+.|++++|.++
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999987655 47899999999999999876
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.8e-11 Score=137.39 Aligned_cols=108 Identities=21% Similarity=0.257 Sum_probs=100.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..++++++|++|||++|+++ .||.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 56889999999999988889999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ .+|..++.+++|++|++++|.+++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch
Confidence 9999998 789999999999999999999987
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-10 Score=125.30 Aligned_cols=118 Identities=22% Similarity=0.308 Sum_probs=106.4
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+.+.|.+ ..++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999963 25789999999999877778999999999999999999988999999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.++ .+|..+. ++|++|++++|.+++-.+..+..+++|+.|++++|.++.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc
Confidence 998 7888776 799999999999987655668999999999999999973
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.9e-11 Score=137.10 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=98.6
Q ss_pred CcEEEEEecCCCCcccCc-hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCc-ccCCcccCCCCCCCEE
Q 004124 169 GKVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS-GPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~-G~iP~~l~~l~~L~~L 246 (772)
..++.|+|++|.+.+..+ ..+..+++|++|+|++|.+.+.+|..+.++++|+.|+|++|.++ |.+|..++.+++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 356788888888888766 35788899999999999999888888888999999999999987 6888888899999999
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++++|++++..|..+..+++|+.|++++|.+++..|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 9999999988888888899999999999998876554
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.6e-11 Score=127.84 Aligned_cols=110 Identities=20% Similarity=0.154 Sum_probs=99.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++..+..+..+++|++|+|++|.+.+..+..+..+++|+.|+|++|.+++..|..+.++++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 46889999999999877778999999999999999999877778999999999999999999988999999999999999
Q ss_pred ccCCCcccCChhh----cCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLGGISPEL----HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~----~~l~~L~~l~l~~N~l~g 279 (772)
++|++++ +|..+ ..+++|+.|+|++|.+++
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999986 67665 579999999999999995
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.15 E-value=7.5e-11 Score=114.34 Aligned_cols=100 Identities=27% Similarity=0.271 Sum_probs=88.9
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+.+.|++ ..++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 7899999963 25778999999999988888999999999999999999766666799999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCC
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGIS 258 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP 258 (772)
+|++-.|..+.++++|++|+|++|.|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998666679999999999999999987654
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=122.66 Aligned_cols=107 Identities=21% Similarity=0.100 Sum_probs=51.1
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..|+|++|.+. .+|..+..+++|++|+|++|.+++..|..+.++++|+.|+|++|++++-.|..+..+++|+.|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 444555555544 3444444555555555555555544444445555555555555555543333344455555555555
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 251 NQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
|++++-.+..+..+++|+.|+|++|.++
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 5544222222344555555555555554
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=138.48 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=90.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++-.+..++++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 67888888888888666678888888888888888888888888888888888888888885333457888888888888
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|.+++-.|..++++++|++|+|++|.+++..|.
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG 139 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCch
Confidence 8888766666788888888888888888776554
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=130.87 Aligned_cols=123 Identities=20% Similarity=0.131 Sum_probs=107.7
Q ss_pred eeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcC
Q 004124 161 WFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229 (772)
Q Consensus 161 w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l 229 (772)
|..|.|.+ ..++.|+|++|++.+..+..+.++++|++|+|++|.+++..|..+.++++|++|+|++|.+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 67899963 2578999999999998888999999999999999999998889999999999999999999
Q ss_pred cccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 230 ~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++-.+..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|+..+.++.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 976666789999999999999999865556788889999999988766666665
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=9.1e-11 Score=136.82 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=105.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+++..|..+.++++|++|+|++|.+.+..|..++++++|++|+|++|.+++..|..++++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68899999999999888899999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC-cccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~ 283 (772)
+|.+++-.|..++.+++|++|+|++|.+++ .+|.
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCccc
Confidence 999998667778999999999999999987 3444
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.13 E-value=9e-11 Score=135.79 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..++++++|++|||++|.++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46889999999999887888999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ .+|..++++++|++|+|++|.+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 9999987 778899999999999999999886
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=133.55 Aligned_cols=94 Identities=20% Similarity=0.123 Sum_probs=66.4
Q ss_pred cCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEECccCCCcccCChh-hcCCCC
Q 004124 190 GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPE-LHVLKV 266 (772)
Q Consensus 190 ~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l~~N~~~G~iP~~-~~~l~~ 266 (772)
..+++|++|+|++|.+++.+|..++++++|+.|+|++|.+++ .+|..++++++|+.|++++|.+++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 556677777777777777777777777777777777777776 45566777777777777777777766654 556677
Q ss_pred CCEEEcCCCCCCCcccc
Q 004124 267 ISEIQVDESWLTNAASR 283 (772)
Q Consensus 267 L~~l~l~~N~l~g~~p~ 283 (772)
|+.|+|++|.++|.+|.
T Consensus 430 L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp CCEEECCSSCCCGGGGS
T ss_pred CCEEECCCCCCCcchhh
Confidence 77777777777766654
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.5e-10 Score=135.21 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=104.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++-.+..+.+|++|++|+|++|.+++-.|..+.++++|++|+|++|++++-.|..++++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 46889999999999866667999999999999999999877778999999999999999999866667999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++ .+|..++.+++|+.|+|++|.+++-.|.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9999976 6889999999999999999999986554
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=123.72 Aligned_cols=119 Identities=22% Similarity=0.309 Sum_probs=104.3
Q ss_pred CCceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 158 PCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 158 ~C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
.|+|+.+.|.+ ..++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 37899999963 2578899999999987777899999999999999999998899999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
|.++ .+|..+. ++|++|++++|.+++-.+..+..+++|+.|++++|.++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 9998 6887765 689999999999887777778889999999999988863
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.6e-10 Score=109.95 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=91.7
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccC
Q 004124 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N 251 (772)
+.++++++++.. +|..+ .++|++|+|++|.+++..+..++++++|++|+|++|.+++-.|..++++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 468899998865 56544 379999999999999766667899999999999999999766666799999999999999
Q ss_pred CCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 252 QYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 252 ~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
.+++-.|..+..+++|+.|+|++|.+++-
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 115 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSV 115 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEe
Confidence 99987666789999999999999999953
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.8e-10 Score=118.81 Aligned_cols=114 Identities=21% Similarity=0.196 Sum_probs=91.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++-.+..+..+++|++|+|++|.+.+..+..+.++++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46788899888887533334577889999999999988766666788889999999999998877777888889999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++-.+..+..+++|+.|+|++|.+++-.+
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 9998886555557888899999999998886433
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-11 Score=130.79 Aligned_cols=108 Identities=18% Similarity=0.234 Sum_probs=92.3
Q ss_pred EEEecCCCC-cccCchhhc-------CCCCCCEEEcccCcCcccCchhh--cCCCCCCEeeccCCcCcccCCcccCCC--
Q 004124 173 ILNLRDLCL-GGMLAPELG-------QLSELKSIILRNNSFFGTIPKEI--GELKELEILDLGFNNFSGPFPSDFGNS-- 240 (772)
Q Consensus 173 ~l~L~~~~l-~G~ip~~l~-------~l~~L~~L~L~~N~l~G~iP~~l--~~l~~L~~L~ls~N~l~G~iP~~l~~l-- 240 (772)
.|+|++|.+ .+.+|..+. ++++|++|+|++|.++|.+|..+ +.+++|++|+|++|.+++. |..++++
T Consensus 67 ~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~ 145 (312)
T 1wwl_A 67 SLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ 145 (312)
T ss_dssp HCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT
T ss_pred hcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH
Confidence 445556666 456666665 78999999999999999999887 8999999999999999987 8777776
Q ss_pred ---CCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 241 ---FSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 241 ---~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|++|+|++|++++..|..++.+++|+.|+|++|.++|.+
T Consensus 146 ~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 89999999999999888889999999999999999998874
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=6.2e-11 Score=136.46 Aligned_cols=116 Identities=22% Similarity=0.248 Sum_probs=107.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 478899999999999888889999999999999999999888889999999999999999997 6788999999999999
Q ss_pred CccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 248 LDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 248 l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+++|.+.+.+| ..+..+++|+.|++++|.+++.+|..
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 99999888887 47899999999999999999987764
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=132.83 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=53.9
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEEC
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l 248 (772)
+..|++++|.+.+..- ...+++|++|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..++++++|++|++
T Consensus 304 L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~L 381 (520)
T 2z7x_B 304 IKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDI 381 (520)
T ss_dssp CSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEEC
T ss_pred eeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEEC
Confidence 4445555554433210 1344555555555555555555555555555555555555554 44444555555555555
Q ss_pred ccCCCcccCChh-hcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~-~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++.+|.. +..+++|+.|++++|.+++.+|
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 555555544443 3444555555555555554444
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-10 Score=120.93 Aligned_cols=109 Identities=21% Similarity=0.163 Sum_probs=96.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++. |.. +.+++|+.|+|++|.++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 578999999999988888899999999999999999864 433 78999999999999998 789889999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+|++++-.|..+..+++|+.|+|++|.+++-.
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 140 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLP 140 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccC
Confidence 99999777778899999999999999998643
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-10 Score=118.42 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=96.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCc-CcccCchhhcCCCCCCEeeccC-CcCcccCCcccCCCCCCCEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~-l~G~iP~~l~~l~~L~~L~ls~-N~l~G~iP~~l~~l~~L~~L 246 (772)
..++.|+|++|.+.+..+..+..+++|++|+|++|. +++..+..+.++++|+.|+|++ |.+++-.|..+.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468899999999998766689999999999999997 7765556889999999999999 99997666778999999999
Q ss_pred ECccCCCcccCChhhcCCCCCC---EEEcCCC-CCCCc
Q 004124 247 LLDNNQYLGGISPELHVLKVIS---EIQVDES-WLTNA 280 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~---~l~l~~N-~l~g~ 280 (772)
++++|.+++ +|. +..+.+|+ .|++++| .+++-
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i 146 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI 146 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc
Confidence 999999988 887 88888888 9999999 88753
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.09 E-value=6.1e-12 Score=149.91 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=102.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.|+ .||..+++|++|++|+|++|.|+ .||..+++|++|++|+|++|.|+ .||..++++++|++|+|
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 46789999999999 89999999999999999999999 89999999999999999999997 89999999999999999
Q ss_pred ccCCCcccCChhhcCCCCC-CEEEcCCCCCCCccccc
Q 004124 249 DNNQYLGGISPELHVLKVI-SEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L-~~l~l~~N~l~g~~p~~ 284 (772)
++|.|+|.+|..+..+..+ ..|+|++|.++|.+|..
T Consensus 324 ~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 324 EGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp TTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9999999999888664322 34789999999999874
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=140.63 Aligned_cols=115 Identities=21% Similarity=0.205 Sum_probs=97.5
Q ss_pred CcEEEEEecCCCCcccC-chhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcc--cCCCCCCCE
Q 004124 169 GKVVILNLRDLCLGGML-APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD--FGNSFSLTT 245 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~i-p~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~--l~~l~~L~~ 245 (772)
..++.|+|++|.+.+.| |..+.++++|++|+|++|.+.+..|..++++++|++|+|++|.+++.+|.. ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 46778899988888888 456888999999999999999888888999999999999999999888776 888999999
Q ss_pred EECccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 246 LLLDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 246 L~l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|+|++|.+++..| +.++++++|+.|+|++|.+++..|.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 9999999888655 5788899999999999988876654
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-10 Score=132.60 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=99.5
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++|.++|.+|..+. .+++|++|+|++|.+++. | .+..+++|+.|+|++|.++| +|+.++.+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 4799999999999999998886 799999999999999987 3 34579999999999999998 666699999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCC-Ccccc
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~-g~~p~ 283 (772)
|++|.+++ +|..+..+++|+.|++++|.++ +.+|.
T Consensus 221 Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 221 LRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 99999996 8999999999999999999998 55554
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-10 Score=125.61 Aligned_cols=112 Identities=16% Similarity=0.218 Sum_probs=93.4
Q ss_pred cEEEEEecCCCCcccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..++++++.+.. +|+. +..+++|++|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45678888887655 5554 688999999999999998877778999999999999999999887888899999999999
Q ss_pred ccCCCcccCChh-hcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~-~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.++ .+|+. +..+++|+.|++++|.+++..|.
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~ 159 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD 159 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh
Confidence 999988 56665 48899999999999999875543
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=4.9e-10 Score=125.57 Aligned_cols=124 Identities=19% Similarity=0.127 Sum_probs=108.3
Q ss_pred ceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc
Q 004124 160 SWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228 (772)
Q Consensus 160 ~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~ 228 (772)
.|..|.|.+ ..++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..+.++++|+.|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 367899963 246789999999999888899999999999999999998888899999999999999999
Q ss_pred CcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 229 l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+++-.+..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|+..+.++.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 9976556789999999999999999876666888999999999999776666665
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.1e-10 Score=111.63 Aligned_cols=105 Identities=21% Similarity=0.207 Sum_probs=89.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCC-CCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLS-ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~-~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L 246 (772)
..++.|+|++|.+.. +| .+..+. +|++|+|++|.+++. ..++.+++|+.|+|++|.+++ +|+.+ +.+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 357899999999984 54 455555 999999999999975 678999999999999999996 55554 889999999
Q ss_pred ECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCC
Q 004124 247 LLDNNQYLGGISP--ELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 247 ~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++|.+ +.+|. .+..+++|+.|++++|.++.
T Consensus 94 ~L~~N~i-~~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 94 ILTNNSL-VELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp ECCSCCC-CCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ECCCCcC-CcchhhHhhhcCCCCCEEEecCCCCCC
Confidence 9999998 56787 88899999999999999873
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=131.68 Aligned_cols=117 Identities=19% Similarity=0.127 Sum_probs=105.1
Q ss_pred CcEEEEEecCCCCcccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc---CCcccCCCCCCC
Q 004124 169 GKVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP---FPSDFGNSFSLT 244 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~---iP~~l~~l~~L~ 244 (772)
..++.|+|++|.+.+.+++. +..+++|++|+|++|.+.+..|..++.+++|+.|+|++|.+++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 36789999999999887765 88999999999999999999999999999999999999999883 335688999999
Q ss_pred EEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccccc
Q 004124 245 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRAS 285 (772)
Q Consensus 245 ~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~~ 285 (772)
+|++++|.+++..|..+..+++|+.|+|++|.+++..|...
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 520 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEAL 520 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGG
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHh
Confidence 99999999999999999999999999999999999877643
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=7.9e-11 Score=125.60 Aligned_cols=114 Identities=14% Similarity=0.044 Sum_probs=65.2
Q ss_pred cEEEEEecCCCCcccCc----hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc--CC--cccCCCC
Q 004124 170 KVVILNLRDLCLGGMLA----PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP--FP--SDFGNSF 241 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip----~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~--iP--~~l~~l~ 241 (772)
.+..|+|++|.+++.++ ..+..+++|++|+|++|.+.+..|..++.+++|++|||++|++.|. +| ..+++++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 45566666666665444 2334566666666666666665566666666666666666666542 22 2235566
Q ss_pred CCCEEECccCCCc--ccCChh-hcCCCCCCEEEcCCCCCCCcccc
Q 004124 242 SLTTLLLDNNQYL--GGISPE-LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 242 ~L~~L~l~~N~~~--G~iP~~-~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|+|++|+++ +.++.. +..+++|++|+|++|.+++.+|.
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 6666666666664 122222 34556666666666666665543
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.6e-10 Score=129.59 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=64.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++-.+..++++++|++|+++
T Consensus 53 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 132 (570)
T 2z63_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (570)
T ss_dssp SCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECC
T ss_pred CceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecC
Confidence 45555666655555444455556666666666666655555555666666666666666554333345666666666666
Q ss_pred cCCCcc-cCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 250 NNQYLG-GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 250 ~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+|.+++ .+|..++++++|+.|++++|.+++.
T Consensus 133 ~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 666655 4566666666666666666666543
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4e-10 Score=133.33 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=84.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..++++++|++|+|++|.+++..+..++++++|++|+|++|.+++..|..++++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 35667777777777777777777777777777777777533335777777777777777777655667777777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..++++++|++|++++|.+++..+.
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 77777777777777777777777777777765543
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=6.3e-10 Score=122.44 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcc-cCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~-l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|.++ .+|.. ++++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 35789999999998877778999999999999999999988888999999999999999999 56665 58999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+++|.+++-.|..+..+++|+.|++++|.+++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999988888899999999999999999864
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-10 Score=123.18 Aligned_cols=110 Identities=21% Similarity=0.193 Sum_probs=91.7
Q ss_pred cEEEEEecCCCCcccCchhh--cCCCCCCEEEcccCcCcccCc----hhhcCCCCCCEeeccCCcCcccCCcccCCCCCC
Q 004124 170 KVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIP----KEIGELKELEILDLGFNNFSGPFPSDFGNSFSL 243 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~N~l~G~iP----~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L 243 (772)
+++.|+|++|.+.|.+|..+ ..+++|++|+|++|.+++.+| ..+..+++|++|+|++|.+++..|..++++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47889999999999888887 889999999999999988766 345678899999999999988888888899999
Q ss_pred CEEECccCCCccc--CChh--hcCCCCCCEEEcCCCCCCC
Q 004124 244 TTLLLDNNQYLGG--ISPE--LHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 244 ~~L~l~~N~~~G~--iP~~--~~~l~~L~~l~l~~N~l~g 279 (772)
++|+|++|++.|. +|.. ++.+++|++|+|++|.++.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 211 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET 211 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc
Confidence 9999999988764 3332 3678899999999999873
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=7.3e-10 Score=114.85 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=101.9
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+....+.|+.+.||+.... +..+++|......... ...+.+|+++++.+. |..+.++++++...+ ..++|
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv 88 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLL 88 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEE
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-----HHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEE
Confidence 44455566777899999754 6788998875421111 135888999999884 677889999988765 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------ 603 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~------------------------------------ 603 (772)
|||++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999876531 11123468889999999999711
Q ss_pred ---------------------CCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 604 ---------------------PPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 604 ---------------------~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
+.++|+|+++.|||++++..+.|.||+.+
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 34899999999999987666789999864
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.2e-10 Score=127.26 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=90.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..+..++++++|+.|+|++|.+++..|..+.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 46778888888888877778888888888888888887544455778888888888888888877878888888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|.+++-.|..+..+++|+.|+|++|.+++..
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 888888777777888888888888888887643
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-09 Score=120.27 Aligned_cols=114 Identities=19% Similarity=0.110 Sum_probs=99.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++-.+..+.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47889999999999877788999999999999999999666667999999999999999999766668899999999999
Q ss_pred ccCCCcccCCh-hhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISP-ELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~-~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|+..+.+|. .+..+++|+.|+|++|.++ .+|.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~ 202 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN 202 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccc
Confidence 99777777776 5788999999999999998 4553
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-10 Score=111.28 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=92.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc--ccCCCCCCCEEE
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~--~l~~l~~L~~L~ 247 (772)
.+..|+|++|.+++- +.+..+++|++|+|++|.+++..|..++.+++|++|+|++|.++ .+|. .++.+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 688999999999985 67999999999999999999654444589999999999999994 6786 789999999999
Q ss_pred CccCCCcccCChh----hcCCCCCCEEEcCCCCCC
Q 004124 248 LDNNQYLGGISPE----LHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G~iP~~----~~~l~~L~~l~l~~N~l~ 278 (772)
+++|.++ .+|.. +..+++|+.|+++.|...
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 57775 889999999999988765
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=4.7e-10 Score=129.71 Aligned_cols=101 Identities=22% Similarity=0.180 Sum_probs=91.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccC-CcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF-PSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~i-P~~l~~l~~L~~L~ 247 (772)
..++.|+|++|.|+ .||..++.|++|+.|+|++|.+++ || .++++++|+.|+|++|++++.+ |..++++++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 47889999999999 899999999999999999999998 88 8999999999999999999987 99999999999999
Q ss_pred CccCCCcccCChh---hcCCCCCCEEEc
Q 004124 248 LDNNQYLGGISPE---LHVLKVISEIQV 272 (772)
Q Consensus 248 l~~N~~~G~iP~~---~~~l~~L~~l~l 272 (772)
|++|.++|..|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999876632 334889998865
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=117.58 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=73.8
Q ss_pred CcEEEEEecCCCCc--ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEE
Q 004124 169 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L 246 (772)
..+..|+|++|.+. |..+..+..+++|++|++++|.++. +|..+. ++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 35667777777764 3555666777777777777777663 555443 667777777777776666667777777777
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|.+++..|..+..+++|+.|+|++|.++ .+|.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 77777776666666666777777777777766 4544
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-09 Score=117.10 Aligned_cols=121 Identities=19% Similarity=0.118 Sum_probs=84.2
Q ss_pred CceeeEEeC-CCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCcc
Q 004124 159 CSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 159 C~w~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
|...++.+. -..+..|+|++|.+++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++. | .
T Consensus 109 n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~ 186 (317)
T 3o53_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-G 186 (317)
T ss_dssp SCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-C
T ss_pred CccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-c
Confidence 344444443 24577778888887776666777778888888888888777666653 677788888888877754 3 3
Q ss_pred cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 237 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
...+++|+.|+|++|.+++ +|+.+..+++|+.|+|++|.++ .+|.
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~ 231 (317)
T 3o53_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEK 231 (317)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECT
T ss_pred ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhh
Confidence 3457778888888887775 4556777778888888888777 3454
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=98.97 E-value=1e-09 Score=127.92 Aligned_cols=111 Identities=22% Similarity=0.221 Sum_probs=102.0
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 57899999999999888899999999999999999999888889999999999999999995444446999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 9999998888999999999999999999974
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.4e-09 Score=105.74 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=83.7
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|...-+.|.+ ..+..|+|++|.+.+..|..+..+++|++|+|++|.|++..+..+.++++|+.|+|++|
T Consensus 12 C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 12 CDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp ECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4556677752 25779999999999988889999999999999999999855555789999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCccc
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGG 256 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~ 256 (772)
++++-.|..+.++++|++|+|++|.|...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99975555599999999999999999864
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=98.96 E-value=7.4e-10 Score=113.22 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=98.6
Q ss_pred CcEEEEEecCCC-CcccCchhhcCCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCC--
Q 004124 169 GKVVILNLRDLC-LGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT-- 244 (772)
Q Consensus 169 ~~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~-- 244 (772)
.+++.|+|++|. +++-.+..+..+++|++|+|++ |.+++..|..+.++++|+.|+|++|.+++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 468899999997 7665555789999999999999 99997667789999999999999999998 887 88888998
Q ss_pred -EEECccC-CCcccCChhhcCCCCCC-EEEcCCCCCCCccccc
Q 004124 245 -TLLLDNN-QYLGGISPELHVLKVIS-EIQVDESWLTNAASRA 284 (772)
Q Consensus 245 -~L~l~~N-~~~G~iP~~~~~l~~L~-~l~l~~N~l~g~~p~~ 284 (772)
+|++++| .+++-.+..+..+++|+ .|++++|.++ .+|..
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999 88766556689999999 9999999998 77763
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=98.96 E-value=9e-10 Score=117.80 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=98.0
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++|.+++..+..+. .+++|++|+|++|.+++. | ....+++|+.|+|++|.+++ +|+.+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 4799999999999998777774 799999999999999875 4 34469999999999999996 666799999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCC-Ccccc
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~-g~~p~ 283 (772)
|++|.++ .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 9999998 58999999999999999999999 55554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.5e-10 Score=120.63 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=99.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc--ccCCCCCCCEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~--~l~~l~~L~~L 246 (772)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..+..++++++|++|+|++|.+++ +|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 478899999999999878889999999999999999996444458999999999999999994 665 78899999999
Q ss_pred ECccCC-CcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 247 LLDNNQ-YLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 247 ~l~~N~-~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++++|+ +.+-.|..+..+++|+.|++++|.+++..|..
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS 193 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH
Confidence 999995 55545668899999999999999999876653
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-09 Score=122.57 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=95.3
Q ss_pred CcEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++++.-+.+++ .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.+++..|..+.++++|+.|+
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEE
Confidence 4677889988666666766 47889999999999999985 45 588899999999999999998888899999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|++++..|..+..+++|+.|+|++|.+++-.+
T Consensus 249 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred eCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 99999998888888999999999999999985443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.2e-10 Score=120.35 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=77.4
Q ss_pred CcEEEEEecCCCCc--ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEE
Q 004124 169 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L 246 (772)
..+..|+|++|.+. |..+..+..+ +|++|++++|.+++ +|..+. ++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 45778888888885 3555666666 77777777777765 665543 567777777777777666677777777777
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|.+++-.|..+..+++|+.|+|++|.++ .+|.
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 77777777666666777777777777777776 5554
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4.8e-12 Score=125.85 Aligned_cols=104 Identities=25% Similarity=0.319 Sum_probs=64.9
Q ss_pred EEEEEecCCCCcccCch------hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCC
Q 004124 171 VVILNLRDLCLGGMLAP------ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT 244 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~------~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~ 244 (772)
++.++|+.+.++|.+|+ .+..+++|++|+|++|.+++ +| .+.++++|+.|+|++|.++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 34444555555555554 66666666666666666665 55 6666666666666666666 4665555556666
Q ss_pred EEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 245 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 245 ~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.|+|++|.+++ +| .+..+++|+.|+|++|.+++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 66666666665 34 46666666666666666664
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.94 E-value=9.1e-10 Score=126.96 Aligned_cols=98 Identities=20% Similarity=0.178 Sum_probs=71.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.+++ ||. .+++|++|+|++|.+++ ||. .+++|+.|+|++|.+++ +|. ++ ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 56677777777777 665 57778888888888876 775 56788888888888887 777 55 788888888
Q ss_pred cCCCcccCChhhcCCCCC-------CEEEcCCCCCCCccccc
Q 004124 250 NNQYLGGISPELHVLKVI-------SEIQVDESWLTNAASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L-------~~l~l~~N~l~g~~p~~ 284 (772)
+|+++ .||. +.. +| +.|+|++|.++ .+|..
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGG
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHH
Confidence 88877 6776 544 66 78888888887 46653
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.9e-10 Score=128.04 Aligned_cols=49 Identities=12% Similarity=-0.018 Sum_probs=22.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 218 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~ 218 (772)
.++..++|++|.+ |.||+++++|++|++|+|++|.+.|.+|..++++++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 59 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQRE 59 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHH
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchh
Confidence 4577889999998 889999999999999999999999999988877654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=98.92 E-value=3.2e-09 Score=112.13 Aligned_cols=106 Identities=23% Similarity=0.307 Sum_probs=76.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++.. + +..+++|++|+|++|.+++ +| .++.+++|+.|+|++|.+++ + +.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIK-P-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCc-c-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 45677788887777643 3 7777888888888887776 33 37777888888888887776 3 45777777888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++- +.+..+++|+.|+|++|.+++..|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 88877764 567777788888888887776544
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.7e-09 Score=120.18 Aligned_cols=100 Identities=16% Similarity=0.228 Sum_probs=71.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|+++.++|. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|.+++ +| ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 3566777777777763 3 57777777777777777776 34 6777777777777777776 33 677777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ +| ++.+++|+.|++++|.+++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 7777776 44 6777777777777777776
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-09 Score=110.34 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=92.6
Q ss_pred ccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc--ccceeEEEEcCCCceEEEEEeccCC
Q 004124 488 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVFEYSPN 565 (772)
Q Consensus 488 ~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN--IV~l~g~~~~~~~~~~~LV~Ey~~~ 565 (772)
.|..+.||+....+|..+++|...... ...+.+|+++++.+++.+ +.+++++...++ ..++||||+++
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G 99 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPG 99 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSS
T ss_pred CCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCC
Confidence 455689999987777889998864321 134778899998885544 456888877655 57999999999
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 004124 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------------ 603 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~------------------------------------------ 603 (772)
.+|. .. ..+ ...++.++++.|..||+..
T Consensus 100 ~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 100 QDLL--SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp EETT--TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred cccC--cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 8884 21 111 2356777888888888643
Q ss_pred --------------CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 604 --------------PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 --------------~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
+.++|+|++|.|||++++..++|.||+.+.
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 129999999999999887677899999753
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.90 E-value=4.9e-10 Score=120.38 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=91.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCccc-CchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~-iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..++.++|++|.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|+.|+|++|.+++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567788888888776554 66788899999999988877 888888889999999999988888888888888999999
Q ss_pred CccC-CCcc-cCChhhcCCCCCCEEEcCCC-CCCCc
Q 004124 248 LDNN-QYLG-GISPELHVLKVISEIQVDES-WLTNA 280 (772)
Q Consensus 248 l~~N-~~~G-~iP~~~~~l~~L~~l~l~~N-~l~g~ 280 (772)
|++| .+++ .+|..+..+++|+.|++++| .+++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9988 6776 37777888888999999988 88864
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.2e-09 Score=109.54 Aligned_cols=101 Identities=20% Similarity=0.217 Sum_probs=47.9
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+++. ++ +..+++|++|+|++|.+++ +|... . ++|+.|+|++|.+++ +| .++++++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 344555555555442 22 4555555555555555543 33211 1 455555555555554 22 34455555555555
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++++ +| .+..+++|+.|+|++|.+++
T Consensus 137 ~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 137 NNKLKS-IV-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp TSCCCB-CG-GGGGCTTCCEEECTTSCCCB
T ss_pred CCcCCC-Ch-HHccCCCCCEEECCCCcCcc
Confidence 555544 22 34455555555555555544
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.6e-09 Score=109.25 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=89.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.++. ++ .+..+++|++|+|++|.+++..| +.++++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 467799999999875 55 78999999999999999997544 9999999999999999997 55433 3 89999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++ + +.+..+++|+.|+|++|.+++-
T Consensus 114 ~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 114 DNNELRD-T-DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-C-hhhcCcccccEEECCCCcCCCC
Confidence 9999987 4 4699999999999999999974
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4e-09 Score=111.40 Aligned_cols=103 Identities=25% Similarity=0.304 Sum_probs=92.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++ + +.+..+++|++|+|++|.+++ + +.+..+++|+.|+|++|.+++. +.++.+++|+.|++
T Consensus 90 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 468899999999988 3 459999999999999999987 3 4689999999999999999975 67899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++..| +..+++|+.|+|++|.+++
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 9999987544 9999999999999999986
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=98.88 E-value=2.1e-10 Score=123.35 Aligned_cols=122 Identities=11% Similarity=0.077 Sum_probs=107.3
Q ss_pred CCceeeEEeCCCcEEEEEecCCCCcccCchhhcCC--CCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc-CC
Q 004124 158 PCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQL--SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FP 234 (772)
Q Consensus 158 ~C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l--~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-iP 234 (772)
|.+|.++.|+...++.++|+++.+. +..+..+ +.++.|++++|.+.+.+|. +.++++|+.|+|++|.+++. +|
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH
Confidence 4479999887666889999999887 4556777 8999999999999988776 67899999999999999987 89
Q ss_pred cccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCC-CCCCc-ccc
Q 004124 235 SDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDES-WLTNA-ASR 283 (772)
Q Consensus 235 ~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N-~l~g~-~p~ 283 (772)
..+..+++|++|+|++|.+++.+|..++.+++|+.|+|++| .+++. ++.
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~ 162 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT 162 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHH
Confidence 88999999999999999999999999999999999999999 78863 444
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5.4e-10 Score=122.87 Aligned_cols=113 Identities=17% Similarity=0.203 Sum_probs=74.7
Q ss_pred cEEEEEecCCCCc--c---cCchhhcCCCCCCEEEcccCcCc----ccCchhhcCCCCCCEeeccCCcCccc----CCcc
Q 004124 170 KVVILNLRDLCLG--G---MLAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGP----FPSD 236 (772)
Q Consensus 170 ~v~~l~L~~~~l~--G---~ip~~l~~l~~L~~L~L~~N~l~----G~iP~~l~~l~~L~~L~ls~N~l~G~----iP~~ 236 (772)
.++.|+|++|.++ | .++..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|..
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 267 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHH
Confidence 5667777777766 3 23336666777777777777775 55676677777777777777777665 5555
Q ss_pred c--CCCCCCCEEECccCCCcc----cCChhh-cCCCCCCEEEcCCCCCCCccc
Q 004124 237 F--GNSFSLTTLLLDNNQYLG----GISPEL-HVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 237 l--~~l~~L~~L~l~~N~~~G----~iP~~~-~~l~~L~~l~l~~N~l~g~~p 282 (772)
+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|.+++..+
T Consensus 268 l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5 336677777777777766 466666 456777777777777776543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=98.86 E-value=5.7e-09 Score=111.13 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=82.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++ + +.+..+++|++|+|++|.+++ +|. +..+++|+.|+|++|.+++..| ++++++|++|++
T Consensus 85 ~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 467788888888877 3 368888888888888888876 443 7888888888888888886433 778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++ +|+ +..+++|+.|+|++|.+++..+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 8888876 444 7888888888888888876443
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-09 Score=121.68 Aligned_cols=106 Identities=22% Similarity=0.282 Sum_probs=85.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.+++..+ +..|++|+.|+|++|.+.+ +| .++.|++|+.|+|++|.+++ + +.+.++++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467788888888887443 8888888888888888876 34 68888888888888888886 3 45788888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++- +.+..+++|+.|+|++|.+++..|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88888774 568888888888888888887666
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=98.85 E-value=7.4e-09 Score=110.26 Aligned_cols=104 Identities=23% Similarity=0.361 Sum_probs=81.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+. ++ +..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.+++ +|. +..+++|++|++
T Consensus 63 ~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 4677888888888764 44 8888888888888888876 34 57888888888888888886 443 788888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++- |+ +..+++|+.|+|++|.+++.
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCC
Confidence 88888764 33 77888888888888888863
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.7e-11 Score=121.79 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=98.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+.+ +| .+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|.+++ +| .++++++|++|++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 468899999999988 77 8999999999999999998 789888889999999999999997 66 6889999999999
Q ss_pred ccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++--+ ..+..+++|+.|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999986322 4789999999999999999987664
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=98.84 E-value=5.8e-09 Score=121.36 Aligned_cols=104 Identities=25% Similarity=0.301 Sum_probs=87.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+ + +.+..|++|+.|+|++|.+.+ + +.+..|++|+.|+|++|.+++. ..++.+++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 467889999998887 3 478889999999999999986 3 4588899999999999999875 57888999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++..| +..+++|+.|+|++|.+++-
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 9999887665 88899999999999998863
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.83 E-value=9e-09 Score=111.93 Aligned_cols=142 Identities=11% Similarity=0.209 Sum_probs=103.0
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEee--ecccchhhhhHHHHHHHHHHHHhcCC--CCcccceeEEEEcCCC-ceEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTS--VKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEP-FTRM 557 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~--~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~-~~~~ 557 (772)
+..++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.++ +..+.++++++.+.+. ...+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4567789999999998764 567777654 2111 011246788999999986 4568889998876531 1368
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------------------------------- 602 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~----------------------------------- 602 (772)
+||||+++..+.+.. ...++...+..++.++++.|+.||+.
T Consensus 118 ~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999999998875422 13467888889999999999999973
Q ss_pred ---------------------CCCeEeeCCCCCCeEECCCCc--EEEccccCcc
Q 004124 603 ---------------------TPPIAHRNLQSSSIYLTEDYA--AKISDFSFWN 633 (772)
Q Consensus 603 ---------------------~~~IvHrDLKp~NILld~~~~--~kLsDFGla~ 633 (772)
.+.++|+|+++.|||++.++. +.|.||+.+.
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 145999999999999987653 6899999764
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.3e-09 Score=112.85 Aligned_cols=109 Identities=22% Similarity=0.308 Sum_probs=97.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++.. + +..+++|++|+|++|.+++ + +.+..+++|+.|++++|.+++. +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLS-P-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCc-c-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 46889999999998744 3 8999999999999999987 3 4689999999999999999974 45889999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..+..+++|+.|++++|.+++..|.
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 329 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPL 329 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGG
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccCh
Confidence 99999999999999999999999999999987773
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=98.80 E-value=9.4e-09 Score=110.88 Aligned_cols=108 Identities=18% Similarity=0.238 Sum_probs=94.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..+++++|.+.+..+ +..+++|++|+|++|.+++..+ +..+++|+.|++++|.+++ + +.+..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 467899999999987544 8899999999999999987544 8999999999999999997 3 46889999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++|.+++- +.+..+++|+.|++++|.+++..|..
T Consensus 273 ~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 273 GSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEV 306 (347)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHH
T ss_pred cCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhH
Confidence 99999874 46889999999999999999877654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-08 Score=115.73 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=83.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..| ++.+++|+.|++
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467788888888887554 7888888888888888887544 7888888888888888887544 778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 8888887655 67888888888888888874
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=98.80 E-value=4.3e-09 Score=118.43 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=74.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcc--cCchhhc-------------CC-CCCCEeeccCCcCccc
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG--TIPKEIG-------------EL-KELEILDLGFNNFSGP 232 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G--~iP~~l~-------------~l-~~L~~L~ls~N~l~G~ 232 (772)
..++.|+|++|.+.+ +|.. +++|++|+|++|.++| .+|..+. .+ ++|+.|++++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356667777777666 4432 2566666666666666 4443321 22 578899999999887
Q ss_pred CCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC--ccccc
Q 004124 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN--AASRA 284 (772)
Q Consensus 233 iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g--~~p~~ 284 (772)
+|.. +++|+.|++++|+++ .+|. .+++|+.|++++|.++| .+|..
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~ 378 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPES 378 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTT
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHH
Confidence 7765 478999999999988 5887 57889999999999998 67753
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=115.15 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=80.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|...|.+ .++.+++|++|+|++|.+++ +| ++.+++|+.|++++|.+++. .++.+++|+.|++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 45778888888777777 47788888888888888887 56 77888888888888888874 3778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|+++| +| ++.+++|+.|++++|.++|.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 8888887 66 77888888888888888874
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.1e-08 Score=119.35 Aligned_cols=81 Identities=22% Similarity=0.251 Sum_probs=42.0
Q ss_pred CCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEc
Q 004124 193 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQV 272 (772)
Q Consensus 193 ~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l 272 (772)
++|++|+|++|.+++ +| ..+++|+.|+|++|.++ .||. .+++|+.|+|++|+++ .||..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555555555543 44 23445555555555555 3443 3445555555555555 55555555555555555
Q ss_pred CCCCCCCccc
Q 004124 273 DESWLTNAAS 282 (772)
Q Consensus 273 ~~N~l~g~~p 282 (772)
++|.++|.+|
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 5555555444
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.8e-09 Score=118.71 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=51.4
Q ss_pred EEEEEecCCCCc-ccCc---hhhcCCCCCCEEEcccCcCc--c---cCchhhcCCCCCCEeeccCCcCc----ccCCccc
Q 004124 171 VVILNLRDLCLG-GMLA---PELGQLSELKSIILRNNSFF--G---TIPKEIGELKELEILDLGFNNFS----GPFPSDF 237 (772)
Q Consensus 171 v~~l~L~~~~l~-G~ip---~~l~~l~~L~~L~L~~N~l~--G---~iP~~l~~l~~L~~L~ls~N~l~----G~iP~~l 237 (772)
+..|+|++|.++ +.++ ..+..+++|++|+|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|..+
T Consensus 161 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred CcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 444555555554 2333 23444455555555555554 2 22334445555555555555554 4444444
Q ss_pred CCCCCCCEEECccCCCccc----CChhh--cCCCCCCEEEcCCCCCCC
Q 004124 238 GNSFSLTTLLLDNNQYLGG----ISPEL--HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~----iP~~~--~~l~~L~~l~l~~N~l~g 279 (772)
..+++|++|+|++|.+++. +|..+ +.+++|+.|+|++|.+++
T Consensus 241 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 241 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 5555555555555555443 33333 224555555555555544
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=98.75 E-value=9.3e-09 Score=115.96 Aligned_cols=107 Identities=25% Similarity=0.294 Sum_probs=95.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.+++..+ +..+++|+.|+|++|.+.+..| ++.+++|+.|+|++|.+++..| ++.+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 468899999999998543 8899999999999999998554 8899999999999999999776 789999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++. +.+..+++|+.|++++|.+++..|.
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~ 371 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTPL 371 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGG
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccchh
Confidence 99999885 5789999999999999999998873
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-08 Score=109.53 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=77.0
Q ss_pred CEEEcccC-cCcccCchhhcCCCCCCEeeccC-CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcC
Q 004124 196 KSIILRNN-SFFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVD 273 (772)
Q Consensus 196 ~~L~L~~N-~l~G~iP~~l~~l~~L~~L~ls~-N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~ 273 (772)
..++++++ .|++ ||. ++.+++|+.|+|++ |+|++-.|..++++++|+.|+|++|+|+|-.|..+..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 8885 999 99999999999996 99998877889999999999999999999989899999999999999
Q ss_pred CCCCCCcc
Q 004124 274 ESWLTNAA 281 (772)
Q Consensus 274 ~N~l~g~~ 281 (772)
+|.|++-.
T Consensus 89 ~N~l~~~~ 96 (347)
T 2ifg_A 89 FNALESLS 96 (347)
T ss_dssp SSCCSCCC
T ss_pred CCccceeC
Confidence 99999643
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.72 E-value=4.9e-09 Score=122.24 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=73.4
Q ss_pred CCCCceeeEEe--------CCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004124 156 VNPCSWFGVEC--------SDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 156 ~~~C~w~Gv~C--------~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
.+||.|+|..| ....++.|+|++++|+ .||..+. ++|++|+|++|.++ .||. .+++|++|||++|
T Consensus 19 ~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N 91 (622)
T 3g06_A 19 APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGN 91 (622)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCC
Confidence 46789977532 2345778888888887 6777665 67888888888887 4665 5677888888888
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++++ ||. .+++|++|+|++|++++ +|. .+.+|+.|++++|.+++
T Consensus 92 ~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 92 QLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred cCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 8773 665 55677777777777665 443 34455555555555543
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.5e-09 Score=113.80 Aligned_cols=108 Identities=20% Similarity=0.170 Sum_probs=50.6
Q ss_pred EEEEEecCCCCcccCc----hhhcCCC-CCCEEEcccCcCcccCchhhcCC-----CCCCEeeccCCcCcccCCcccCC-
Q 004124 171 VVILNLRDLCLGGMLA----PELGQLS-ELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFGN- 239 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip----~~l~~l~-~L~~L~L~~N~l~G~iP~~l~~l-----~~L~~L~ls~N~l~G~iP~~l~~- 239 (772)
++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..++.+ ++|+.|+|++|.+++..+..++.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4455555555544433 3344444 45555555555554444444432 55555555555555444432222
Q ss_pred ---C-CCCCEEECccCCCcccCChhhcC-----CCCCCEEEcCCCCCC
Q 004124 240 ---S-FSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLT 278 (772)
Q Consensus 240 ---l-~~L~~L~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~N~l~ 278 (772)
+ ++|++|+|++|.+++..+..+.. .++|+.|+|++|.++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 2 45555555555554443333221 235555555555554
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.66 E-value=7e-09 Score=113.00 Aligned_cols=107 Identities=14% Similarity=0.045 Sum_probs=58.6
Q ss_pred EEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCc----hhhcCCC-CCCEeeccCCcCcccCCcccCCC-----CCC
Q 004124 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP----KEIGELK-ELEILDLGFNNFSGPFPSDFGNS-----FSL 243 (772)
Q Consensus 174 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP----~~l~~l~-~L~~L~ls~N~l~G~iP~~l~~l-----~~L 243 (772)
.+|+.++++|.+|..+...++|++|+|++|.+++.-+ ..+.+++ +|+.|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555666555555555556666666666555444 4445555 56666666666655555444443 556
Q ss_pred CEEECccCCCcccCChhhcC----C-CCCCEEEcCCCCCCCc
Q 004124 244 TTLLLDNNQYLGGISPELHV----L-KVISEIQVDESWLTNA 280 (772)
Q Consensus 244 ~~L~l~~N~~~G~iP~~~~~----l-~~L~~l~l~~N~l~g~ 280 (772)
++|+|++|.+++..+..++. + ++|+.|+|++|.+++.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGS
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcH
Confidence 66666666655554443332 2 5566666666665543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-09 Score=113.12 Aligned_cols=124 Identities=20% Similarity=0.130 Sum_probs=87.4
Q ss_pred CCceeeEEeCCC--cEEEEEecC---CCCcccCchh------------------------hcCCCCCCE--EEcccCc--
Q 004124 158 PCSWFGVECSDG--KVVILNLRD---LCLGGMLAPE------------------------LGQLSELKS--IILRNNS-- 204 (772)
Q Consensus 158 ~C~w~Gv~C~~~--~v~~l~L~~---~~l~G~ip~~------------------------l~~l~~L~~--L~L~~N~-- 204 (772)
.|+|.|+.|+.. +|+.+...+ ..+.|.+.++ +...+.|.. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 589999999743 676665554 3344555431 111222332 4555662
Q ss_pred -CcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEECccCCCcccCChhhcCCC--CCCEEEcCCCCCCC
Q 004124 205 -FFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK--VISEIQVDESWLTN 279 (772)
Q Consensus 205 -l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~--~L~~l~l~~N~l~g 279 (772)
+.+.++-.-.++++|+.|+||+|++++ .+|..+..+++|+.|+|++|++++- .++..++ +|+.|+|++|.+++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 333333333568999999999999999 7888888999999999999999875 4455555 99999999999998
Q ss_pred cccc
Q 004124 280 AASR 283 (772)
Q Consensus 280 ~~p~ 283 (772)
.+|.
T Consensus 235 ~~~~ 238 (267)
T 3rw6_A 235 TFRD 238 (267)
T ss_dssp GCSS
T ss_pred ccCc
Confidence 7763
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.1e-08 Score=107.36 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=67.4
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchh-hcCCCCCCE-eec
Q 004124 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKE-IGELKELEI-LDL 224 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~-l~~l~~L~~-L~l 224 (772)
|+|..|.|++. .++.|+|++|.++. ||+ .+.+|++|++|+|++|.+.+.||.. +.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 78999999632 35566666666653 443 3566666666666666666666542 455555543 445
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCC
Q 004124 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDE 274 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~ 274 (772)
+.|++++-.|..+.++++|++|++++|++++..+.......++..|++.+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 55666655455566666666666666666554444444444555555544
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-07 Score=99.88 Aligned_cols=179 Identities=15% Similarity=0.181 Sum_probs=114.5
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCc--ccceeEEEEcCCC-ceEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKN--FVNLIGYCEEDEP-FTRMM 558 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpN--IV~l~g~~~~~~~-~~~~L 558 (772)
+..++.|....||+.. ..+++|..... .....+.+|+++|+.+. +.. +.++++.....+. ...|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence 4456788888999863 45777764321 22457889999998884 333 3344444333221 13479
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------ 602 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------------------------------------ 602 (772)
||||+++.+|.+... ..++..++..++.++++.++.||+.
T Consensus 94 vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999988865332 2356666777777888877777751
Q ss_pred --------------------CCCeEeeCCCCCCeEECC--CCcEEEccccCccCCCCC-----Cccc---cchhhh----
Q 004124 603 --------------------TPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTTAA-----KTGS---AAMELL---- 648 (772)
Q Consensus 603 --------------------~~~IvHrDLKp~NILld~--~~~~kLsDFGla~~~~~~-----~~~~---~aPE~~---- 648 (772)
.+.++|+|+++.||++++ ...+.|.||+.+...... .... ..++..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 134899999999999988 556889999976432211 0000 122211
Q ss_pred cc-CCC---------CCCCchHHHHHHHHHHHcCCCcc
Q 004124 649 ET-SAV---------DLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 649 ~~-~~~---------s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
.. +.. ....+.|++|.++|++.+|+.+|
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 10 111 11257899999999999998876
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.47 E-value=1.6e-08 Score=113.46 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=80.8
Q ss_pred CcEEEEEecCCCCccc----CchhhcCCCCCCEEEcccCcCcccCchhhcC-----CCCCCEeeccCCcCccc----CCc
Q 004124 169 GKVVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFFGTIPKEIGE-----LKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~-----l~~L~~L~ls~N~l~G~----iP~ 235 (772)
.++..|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4677888888888764 6777777888888888888887654444432 25788888888888765 566
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcC-----CCCCCEEEcCCCCCCC
Q 004124 236 DFGNSFSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLTN 279 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~N~l~g 279 (772)
.+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6667778888888888877655554442 5678888888888875
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.4e-07 Score=99.06 Aligned_cols=106 Identities=12% Similarity=0.133 Sum_probs=89.0
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCCcc-cCCCCCCCE-EECc
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTT-LLLD 249 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP~~-l~~l~~L~~-L~l~ 249 (772)
.++-++++|+ .||..+ .++|++|+|++|.++. ||+ .+.++++|++|+|++|.+.+.+|.. +.++++|.. +.++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 4677888887 578766 3689999999999984 664 6899999999999999999989864 688888765 6777
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.|++++-.|..+..+++|++|++++|.+++..+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCc
Confidence 899988778888999999999999999986543
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.38 E-value=9.5e-08 Score=98.99 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=68.4
Q ss_pred cCCCCCCEEEcccCcCcc--cCchhhcCCCCCCEeeccCCcCcccCCcccCCCC--CCCEEECccCCCcccCCh------
Q 004124 190 GQLSELKSIILRNNSFFG--TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSF--SLTTLLLDNNQYLGGISP------ 259 (772)
Q Consensus 190 ~~l~~L~~L~L~~N~l~G--~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~--~L~~L~l~~N~~~G~iP~------ 259 (772)
.++++|+.|+|++|.|++ .+|..+..+++|+.|||++|.+++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999999 7888889999999999999999985 3344444 999999999999999883
Q ss_pred -hhcCCCCCCEEE
Q 004124 260 -ELHVLKVISEIQ 271 (772)
Q Consensus 260 -~~~~l~~L~~l~ 271 (772)
-+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356788888875
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.38 E-value=3.6e-08 Score=110.54 Aligned_cols=115 Identities=19% Similarity=0.250 Sum_probs=94.3
Q ss_pred CcEEEEEecCCCCccc----Cchhh-cCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCcccCCcccCC
Q 004124 169 GKVVILNLRDLCLGGM----LAPEL-GQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGPFPSDFGN 239 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~----ip~~l-~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~ 239 (772)
..++.|+|++|.+++. +.+.+ ..+++|++|+|++|.+++. +|..+.++++|+.|||++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 5688999999998764 23333 3689999999999999875 7888889999999999999998765544432
Q ss_pred -----CCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 240 -----SFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 240 -----l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.++|+.|++++|.+++. +|..+..+++|+.|+|++|.+++..+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 36999999999999876 677788899999999999999876443
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.8e-07 Score=102.29 Aligned_cols=111 Identities=16% Similarity=0.095 Sum_probs=67.0
Q ss_pred CcEEEEEecCCCCcccCchhh-cCCCCCCEEEcccCcCcccCchhh-----cCCCCCCEeeccCCcCcc----cCCcccC
Q 004124 169 GKVVILNLRDLCLGGMLAPEL-GQLSELKSIILRNNSFFGTIPKEI-----GELKELEILDLGFNNFSG----PFPSDFG 238 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l-~~l~~L~~L~L~~N~l~G~iP~~l-----~~l~~L~~L~ls~N~l~G----~iP~~l~ 238 (772)
..++.|+|++|.++..-...+ ..+.+|+.|+|++|.++..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 357777777777754322222 234566777777777764433333 235667777777777654 2444445
Q ss_pred CCCCCCEEECccCCCcc----cCChhhcCCCCCCEEEcCCCCCCC
Q 004124 239 NSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 239 ~l~~L~~L~l~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+++|++|+|++|.++. .++..+...++|+.|+|++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 66677777777777653 234455566677777777777764
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.4e-07 Score=99.18 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=78.1
Q ss_pred cEEEEEecCCCCcccCchhh-----cCCCCCCEEEcccCcCcc----cCchhhcCCCCCCEeeccCCcCcc----cCCcc
Q 004124 170 KVVILNLRDLCLGGMLAPEL-----GQLSELKSIILRNNSFFG----TIPKEIGELKELEILDLGFNNFSG----PFPSD 236 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l-----~~l~~L~~L~L~~N~l~G----~iP~~l~~l~~L~~L~ls~N~l~G----~iP~~ 236 (772)
+++.|+|++|.++..-...+ ...+.|++|+|++|.++. .++..+..+++|++|||++|.++. .++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 57788888888865433333 245778888888888864 255666778888888888888865 23455
Q ss_pred cCCCCCCCEEECccCCCcc----cCChhhcCCCCCCEEEcCCCCCCC
Q 004124 237 FGNSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+...++|+.|+|++|.++. .++..+...+.|+.|+|++|.++.
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 6667788888888888764 344455567788888888887764
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.5e-05 Score=84.50 Aligned_cols=135 Identities=14% Similarity=0.115 Sum_probs=85.9
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC---cccceeEEEEcCCCceEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp---NIV~l~g~~~~~~~~~~~LV 559 (772)
+..++.|....||+. +..+++|+... ......+.+|+++|..+.+. .+.+.+.++..... ..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEE
Confidence 345567877899987 56677776321 12345789999999999653 35566666653222 46899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-------------------------------------- 601 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-------------------------------------- 601 (772)
|||++|..+.+... ..++...+..++.++++.|+.||+
T Consensus 92 ~e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~ 167 (306)
T 3tdw_A 92 YRKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDES 167 (306)
T ss_dssp EECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHH
T ss_pred EeccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchh
Confidence 99999987765211 112233333333333333333332
Q ss_pred --------------------CCCCeEeeCCCCCCeEECC---CCc-EEEccccCcc
Q 004124 602 --------------------LTPPIAHRNLQSSSIYLTE---DYA-AKISDFSFWN 633 (772)
Q Consensus 602 --------------------~~~~IvHrDLKp~NILld~---~~~-~kLsDFGla~ 633 (772)
..+.++|+|+++.|||++. ++. ..|.||+.+.
T Consensus 168 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 168 LRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred hHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2235799999999999987 455 5899998654
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.08 E-value=6.4e-07 Score=103.70 Aligned_cols=111 Identities=11% Similarity=0.058 Sum_probs=64.6
Q ss_pred cEEEEEecCCCCcccCchhhcC-CCCCCEEEcc----cCcCccc-----CchhhcCCCCCCEeeccC--CcCcccCCccc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQ-LSELKSIILR----NNSFFGT-----IPKEIGELKELEILDLGF--NNFSGPFPSDF 237 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~-l~~L~~L~L~----~N~l~G~-----iP~~l~~l~~L~~L~ls~--N~l~G~iP~~l 237 (772)
++..|+|..+.+++..+..++. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++ |.+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 4556666666776666655554 6667777774 5566652 444455566666666653 23555544444
Q ss_pred CC-CCCCCEEECccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 238 GN-SFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 238 ~~-l~~L~~L~l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+. +++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++.
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 32 5566666666666655 3444445566666666666666543
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.1e-06 Score=86.14 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=87.3
Q ss_pred CcEEEEEecCC-CCccc----CchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CCc
Q 004124 169 GKVVILNLRDL-CLGGM----LAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~-~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~ 235 (772)
..++.|+|++| .++.. +...+...+.|++|+|++|.++.. +...+...+.|+.|+|++|.++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46789999998 88743 556677789999999999999643 455666778999999999999864 456
Q ss_pred ccCCCCCCCEEEC--ccCCCccc----CChhhcCCCCCCEEEcCCCCCC
Q 004124 236 DFGNSFSLTTLLL--DNNQYLGG----ISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 236 ~l~~l~~L~~L~l--~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
.+...++|++|+| ++|.+... +-..+...+.|+.|+|++|.++
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6777889999999 88998754 3445566789999999999875
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=3.5e-05 Score=79.56 Aligned_cols=125 Identities=11% Similarity=0.139 Sum_probs=82.2
Q ss_pred EEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEEEEEeccCCCChhh
Q 004124 493 TVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570 (772)
Q Consensus 493 ~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~ 570 (772)
.||+.... ++..+++|..... ....+.+|...|+.+. +--+-++++++.+.+ ..++|||++++.++.+
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~~--------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKGS--------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEETH--------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCCSEEHHH
T ss_pred eEEEEEecCCCeEEEEEECCCC--------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEEeeCCccccc
Confidence 68987754 4566788765321 2346888999988874 333667888888776 6799999999887765
Q ss_pred hhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 004124 571 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------------------ 602 (772)
Q Consensus 571 ~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------------------------------------------------ 602 (772)
..... ......++.+++..|.-||..
T Consensus 110 ~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 110 VLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred cccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 43210 011122333444444444421
Q ss_pred --------CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 603 --------TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 --------~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.+.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137999999999999988777899998653
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-06 Score=98.08 Aligned_cols=108 Identities=10% Similarity=0.011 Sum_probs=50.9
Q ss_pred EEEEEecCCCCccc----CchhhcCCCCCCEEEcccCcCc----ccCchhhcCCCCCCEeeccCCcCcccCCcc------
Q 004124 171 VVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGPFPSD------ 236 (772)
Q Consensus 171 v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~N~l~----G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~------ 236 (772)
++.|+|+++.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.| +|..
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 44455555544433 3333344455555555555554 3344444445555555555554443 3333
Q ss_pred ---------------------cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 237 ---------------------FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 237 ---------------------l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+..+++|+.|+++++ ..+.+|..+..+++|+.|+|++|.+++.
T Consensus 245 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~ 308 (592)
T 3ogk_B 245 LEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETE 308 (592)
T ss_dssp CCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHH
T ss_pred HHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHH
Confidence 334444444444432 2344455555555666666666655443
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=5.8e-05 Score=81.47 Aligned_cols=85 Identities=7% Similarity=-0.013 Sum_probs=52.3
Q ss_pred ccc-CccceEEEEEEEEc-------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-C--CcccceeEEEEcCC
Q 004124 484 GSF-SDGTVGTVYKGTLS-------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-H--KNFVNLIGYCEEDE 552 (772)
Q Consensus 484 g~l-g~G~fG~Vykg~~~-------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-H--pNIV~l~g~~~~~~ 552 (772)
..+ +.|....+|+.... ++..+++|........... ....+.+|+.+++.+. + -.+.++++++.+.+
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~--~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF--PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS--SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC--chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 445 67888899998764 2567777765432100000 0124677888888774 2 34677888876542
Q ss_pred C-ceEEEEEeccCCCChhh
Q 004124 553 P-FTRMMVFEYSPNGSLFE 570 (772)
Q Consensus 553 ~-~~~~LV~Ey~~~GsL~~ 570 (772)
. ...++||||+++..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 1 13589999999877653
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=2.7e-05 Score=76.09 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=77.8
Q ss_pred cCchhhcCCCCCCEEEcccC-cCccc----CchhhcCCCCCCEeeccCCcCccc----CCcccCCCCCCCEEECccCCCc
Q 004124 184 MLAPELGQLSELKSIILRNN-SFFGT----IPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYL 254 (772)
Q Consensus 184 ~ip~~l~~l~~L~~L~L~~N-~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l~~l~~L~~L~l~~N~~~ 254 (772)
.+...+...+.|++|+|++| .++.. +...+...++|+.|||++|.+... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 35556778999999999999 88743 556677889999999999999753 3344556688999999999987
Q ss_pred cc----CChhhcCCCCCCEEEc--CCCCCCCc
Q 004124 255 GG----ISPELHVLKVISEIQV--DESWLTNA 280 (772)
Q Consensus 255 G~----iP~~~~~l~~L~~l~l--~~N~l~g~ 280 (772)
.. +...+...+.|+.|+| ++|.++..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 53 5566778899999999 88988753
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.57 E-value=7.7e-06 Score=94.51 Aligned_cols=112 Identities=8% Similarity=-0.027 Sum_probs=77.5
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcc--c----CcCcc-----cCchhhcCCCCCCEeeccCCcCcccCCcc
Q 004124 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILR--N----NSFFG-----TIPKEIGELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~--~----N~l~G-----~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
.++..|.+..+++++.....+. .+++|+.|+|+ + |.+++ .++.-+.++++|+.|+|++ ++++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3466677777888776666665 47888888888 3 45552 2344466778888888866 666665555
Q ss_pred cCC-CCCCCEEECccCCCcccCChhh-cCCCCCCEEEcCCCCCCCcc
Q 004124 237 FGN-SFSLTTLLLDNNQYLGGISPEL-HVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 237 l~~-l~~L~~L~l~~N~~~G~iP~~~-~~l~~L~~l~l~~N~l~g~~ 281 (772)
++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 655 7778888888888776555555 56788888888888875543
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00038 Score=74.17 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=27.0
Q ss_pred CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 ~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.+.++|+|+++.|||++.++.+.|.||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 3469999999999999888899999998653
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.54 E-value=3.8e-05 Score=88.66 Aligned_cols=113 Identities=11% Similarity=0.099 Sum_probs=86.4
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccC-cCccc-CchhhcCCCCCCEeeccCCcCcccCCccc----CCCC
Q 004124 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNN-SFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDF----GNSF 241 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N-~l~G~-iP~~l~~l~~L~~L~ls~N~l~G~iP~~l----~~l~ 241 (772)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5788999999999888777776 6899999999999 55543 66666689999999999999887654443 3677
Q ss_pred CCCEEECccCCCcccCC-----hhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 242 SLTTLLLDNNQYLGGIS-----PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 242 ~L~~L~l~~N~~~G~iP-----~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|+.|++++|. +.++ .-...+++|+.|+|++|..-+.+|.
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~ 229 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLAT 229 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHH
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHH
Confidence 99999999987 3333 2234579999999998833323443
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00045 Score=72.09 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=51.9
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC---cccceeEEEEcCCCceEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp---NIV~l~g~~~~~~~~~~~LV 559 (772)
+..+|.|..+.||+.+..+|+.++||+....... ....|..|++.|+.+.-. -+.+++++ +. .++|
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~----~~lv 88 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD----RTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET----TEEE
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEec--cC----ceEE
Confidence 5667889999999999999999999975432211 123578899988887422 23444443 22 2789
Q ss_pred EeccCCCCh
Q 004124 560 FEYSPNGSL 568 (772)
Q Consensus 560 ~Ey~~~GsL 568 (772)
|||++.+..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987654
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00036 Score=76.45 Aligned_cols=80 Identities=10% Similarity=0.036 Sum_probs=46.8
Q ss_pred ccccCccceEEEEEEEEc-CCcEEEEEEeeeccc-c-hhhhhHHHHHHHHHHHHhcCCC--Ccc-cceeEEEEcCCCceE
Q 004124 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSR-A-DWSKNLESQFRKKIDTLSKVNH--KNF-VNLIGYCEEDEPFTR 556 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~-~-~~~~~~~~~f~~Ei~~L~~l~H--pNI-V~l~g~~~~~~~~~~ 556 (772)
+..+|.|..+.||+++.. +++.++||....... . ........++..|.+++..+.. +.. .+++.+. .+ ..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--cc
Confidence 456788999999999754 467888987643221 0 0000112356778888887732 443 4555442 22 24
Q ss_pred EEEEeccCCC
Q 004124 557 MMVFEYSPNG 566 (772)
Q Consensus 557 ~LV~Ey~~~G 566 (772)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999763
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.26 E-value=4.6e-05 Score=82.67 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=70.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc--CCCCCCEeeccC--CcCccc--C---Cccc--
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG--ELKELEILDLGF--NNFSGP--F---PSDF-- 237 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~--~l~~L~~L~ls~--N~l~G~--i---P~~l-- 237 (772)
.++..|+|+++. .-.+++ + .+++|+.|+|..+.++...-..++ .+++|+.|+|+. |...|. + -..+
T Consensus 172 P~L~~L~L~g~~-~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTN-NLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCB-TCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCC-Cceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 467788887762 113343 3 377888888888877655444454 688888888853 332222 1 1112
Q ss_pred CCCCCCCEEECccCCCcccCChhhc---CCCCCCEEEcCCCCCCCc
Q 004124 238 GNSFSLTTLLLDNNQYLGGISPELH---VLKVISEIQVDESWLTNA 280 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~iP~~~~---~l~~L~~l~l~~N~l~g~ 280 (772)
..+++|++|+|.+|.+.+..+..+. .+++|+.|+|+.|.+++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3467888888888887765444443 467888888888888764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0036 Score=66.18 Aligned_cols=136 Identities=17% Similarity=0.230 Sum_probs=88.2
Q ss_pred ccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC---CCcccceeEEEEcCCCceEEEE
Q 004124 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+..++.|....+|+.... +..+++|..... ....|..|.+.|+.+. ...+.++++++...+ ..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEE
Confidence 355677888999998864 567788765421 1356888988888873 356888888887655 67999
Q ss_pred EeccCCCChhh-----------hhhhhcc-C-------------------CCCHHHHH---HHHHH--------------
Q 004124 560 FEYSPNGSLFE-----------HLHIQEA-E-------------------HLDWAMRL---RIAMG-------------- 591 (772)
Q Consensus 560 ~Ey~~~GsL~~-----------~L~~~~~-~-------------------~l~~~~~~---~Ia~~-------------- 591 (772)
|||+++..+.. .||.... . .-+|.... ++..+
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999876521 1232111 0 12465321 11111
Q ss_pred --HH-HHHHHH--hcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 592 --MA-YCLEHM--HQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 592 --ia-~gL~yL--H~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
+. .....| |...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 112334 23356799999999999999887 8899974
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00069 Score=73.36 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=55.3
Q ss_pred cEEEEEecCCCCcccCchhhc--CCCCCCEEEccc--CcCccc-----Cchhh--cCCCCCCEeeccCCcCcccCCccc-
Q 004124 170 KVVILNLRDLCLGGMLAPELG--QLSELKSIILRN--NSFFGT-----IPKEI--GELKELEILDLGFNNFSGPFPSDF- 237 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~--~l~~L~~L~L~~--N~l~G~-----iP~~l--~~l~~L~~L~ls~N~l~G~iP~~l- 237 (772)
++..|+|..++++...-..++ .+++|++|+|+. |...|. +-..+ ..+++|++|+|++|.+.+..+..+
T Consensus 194 ~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la 273 (362)
T 2ra8_A 194 NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273 (362)
T ss_dssp TCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHH
T ss_pred CCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHH
Confidence 455556655554433223333 566666666642 221111 11111 235666666666666654333222
Q ss_pred --CCCCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCC
Q 004124 238 --GNSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 238 --~~l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
..+++|++|+|+.|.+.+. ++..+.++++|+.|+|+.|.++.
T Consensus 274 ~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 274 ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 2355666666666666542 33334455666666666665553
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0023 Score=68.01 Aligned_cols=82 Identities=21% Similarity=0.175 Sum_probs=60.1
Q ss_pred CCCCCEEEcccCcCcccCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCC-EEECccCCCcccCC-hhhcCCCCC
Q 004124 192 LSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLT-TLLLDNNQYLGGIS-PELHVLKVI 267 (772)
Q Consensus 192 l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~-~L~l~~N~~~G~iP-~~~~~l~~L 267 (772)
+++|+.|+|++|+++ .|| ..+.+|++|+.|+|++| +. .|+ ..+.+|.+|+ .+++.+ +++ .|+ ..+..+.+|
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L 299 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNL 299 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccC
Confidence 678888888888877 454 45778888888888887 54 354 3477888888 888877 443 333 566778888
Q ss_pred CEEEcCCCCCC
Q 004124 268 SEIQVDESWLT 278 (772)
Q Consensus 268 ~~l~l~~N~l~ 278 (772)
+.++++.|.++
T Consensus 300 ~~l~l~~n~i~ 310 (329)
T 3sb4_A 300 RYVLATGDKIT 310 (329)
T ss_dssp EEEEECSSCCC
T ss_pred CEEEeCCCccC
Confidence 88888888776
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.01 Score=62.63 Aligned_cols=157 Identities=10% Similarity=0.165 Sum_probs=84.2
Q ss_pred CCCHHHHHHHhhccc--c--cccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCc-
Q 004124 466 KLKRSELEAACEDFS--N--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN- 540 (772)
Q Consensus 466 ~~~~~el~~~~~~f~--~--iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN- 540 (772)
.++.+++......|. + -+..++.|....+|+....++ .+++|....... ...+..|+.++..++...
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-------~~~l~~e~~~l~~L~~~g~ 77 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-------KNDLPFFLGLMQHLAAKGL 77 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-------HHHHHHHHHHHHHHHHCCC
Confidence 455667776666553 1 234456677789999987666 577777653211 123456666666653212
Q ss_pred -ccceeEE------EEcCCCceEEEEEeccCCCChhh--------------hhhhhcc----C---C---CCHHHHHH--
Q 004124 541 -FVNLIGY------CEEDEPFTRMMVFEYSPNGSLFE--------------HLHIQEA----E---H---LDWAMRLR-- 587 (772)
Q Consensus 541 -IV~l~g~------~~~~~~~~~~LV~Ey~~~GsL~~--------------~L~~~~~----~---~---l~~~~~~~-- 587 (772)
+.+++.. ....+ ..++++||+++..+.. .+|.... . . ..|.....
T Consensus 78 ~vP~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~ 155 (322)
T 2ppq_A 78 SCPLPLPRKDGELLGELSG--RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKS 155 (322)
T ss_dssp CCCCBCCBTTCCSCEEETT--EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHH
T ss_pred CCCcccCCCCCCEEEEECC--EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHH
Confidence 2233311 11122 4689999998865421 1221100 0 0 12332111
Q ss_pred ----------HHHHHHHHHHHHhc-----CCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 588 ----------IAMGMAYCLEHMHQ-----LTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 588 ----------Ia~~ia~gL~yLH~-----~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
+...+.+.++++++ ..+.++|+|+.+.|||++++..+.|.||+.+
T Consensus 156 ~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 156 EERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp GGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 11124445555542 1235999999999999998766689999864
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0018 Score=67.95 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=24.0
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
+.++|+|+.+.||+ ..++.+.|.||..+.
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 35899999999999 556678999998654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.011 Score=62.73 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=25.9
Q ss_pred CCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004124 604 PPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~----~~~kLsDFGla~ 633 (772)
+.++|||+.+.|||++.+ ..+.|.||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 469999999999999874 689999998754
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.011 Score=64.99 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=26.5
Q ss_pred CCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 603 ~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
.+.++|+|+++.|||++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 34599999999999998876 99999987654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0063 Score=64.60 Aligned_cols=80 Identities=13% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc-ccCCCCCCCEEECccCCCcccCCh-hhcCCCCCC-
Q 004124 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS-DFGNSFSLTTLLLDNNQYLGGISP-ELHVLKVIS- 268 (772)
Q Consensus 192 l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~-~l~~l~~L~~L~l~~N~~~G~iP~-~~~~l~~L~- 268 (772)
..+++.+.+.++-....+......|++|+.|+|++|+++ .||. .+.+|.+|+.++|.+| +. .|++ .+..+.+|+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAG 277 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccE
Confidence 556677776655333222222223788888888888877 4554 4777888888888877 33 3544 466788888
Q ss_pred EEEcCC
Q 004124 269 EIQVDE 274 (772)
Q Consensus 269 ~l~l~~ 274 (772)
.+++..
T Consensus 278 ~l~l~~ 283 (329)
T 3sb4_A 278 TLELPA 283 (329)
T ss_dssp EEEECT
T ss_pred EEEEcc
Confidence 888876
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.033 Score=58.68 Aligned_cols=158 Identities=9% Similarity=0.042 Sum_probs=84.5
Q ss_pred CCCCHHHHHHHhhccc-c---cccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCC-
Q 004124 465 PKLKRSELEAACEDFS-N---IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK- 539 (772)
Q Consensus 465 ~~~~~~el~~~~~~f~-~---iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp- 539 (772)
..++.+++....+.+. . -+..++ |....||+....+|+.+++|....... ....+..|..++..+...
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~~~~~~~E~~~~~~L~~~g 81 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDE 81 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC------CHHHHHHHHHHHHHHHHcC
Confidence 3455566666555442 1 122344 666789998877777788888752211 123456677777766321
Q ss_pred -cccceeEE-----EEcCCCceEEEEEeccCCCChhh-----h---------hhhhc-------cCCCCHHHH----HHH
Q 004124 540 -NFVNLIGY-----CEEDEPFTRMMVFEYSPNGSLFE-----H---------LHIQE-------AEHLDWAMR----LRI 588 (772)
Q Consensus 540 -NIV~l~g~-----~~~~~~~~~~LV~Ey~~~GsL~~-----~---------L~~~~-------~~~l~~~~~----~~I 588 (772)
.+.+++.. ....+ ..++||||+++..+.. + +|... ....++... ..+
T Consensus 82 ~~vp~~~~~~g~~~~~~~g--~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T 1zyl_A 82 VPVAAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKL 159 (328)
T ss_dssp CSBCCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHH
T ss_pred CeecceeecCCcEEEEECC--EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHH
Confidence 23444443 11122 4578999998754421 0 22110 011232211 001
Q ss_pred ---------------HHHHHHHHHHHhc-----CCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 589 ---------------AMGMAYCLEHMHQ-----LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 589 ---------------a~~ia~gL~yLH~-----~~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
...+.+.++.+.+ ..+.++|+|+++.|||++ + .+.|.||+.+.
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 160 FEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1111122333321 233589999999999999 4 89999998654
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.022 Score=61.82 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=75.9
Q ss_pred ccCccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCce
Q 004124 485 SFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~ 555 (772)
.+..|....+|+....+ +..+++|+..... . ....+.+|.++++.+. +.-..++++++. +
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~-----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-Q-----GVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----C-----CHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-c-----hHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 44446667889988642 4678887753211 0 1234568888888774 322356666553 2
Q ss_pred EEEEEeccCCCChhhh-----------------hhhhc---cCCCC--HHHHHHHHHHHH-------------------H
Q 004124 556 RMMVFEYSPNGSLFEH-----------------LHIQE---AEHLD--WAMRLRIAMGMA-------------------Y 594 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~-----------------L~~~~---~~~l~--~~~~~~Ia~~ia-------------------~ 594 (772)
.+||||+++..|..- ||... ..... |.+..++..++. .
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 289999997655311 11110 11122 344444443332 1
Q ss_pred HHHHH----hc--CCCCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004124 595 CLEHM----HQ--LTPPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 595 gL~yL----H~--~~~~IvHrDLKp~NILld~~----~~~kLsDFGla~ 633 (772)
.++.| .. ....++|+|+.+.|||++.+ +.+.|.||..+.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 23333 22 22358999999999999876 789999998653
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.055 Score=60.20 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=44.1
Q ss_pred cccCccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcc-cceeEEEEcCCCceEEEEEe
Q 004124 484 GSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNI-V~l~g~~~~~~~~~~~LV~E 561 (772)
..++.|-...+|+....+ +..+++|+..... .... +-.+|..++..+...++ .++++++. + .+|||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~i-----dR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEII-----NREREKKISCILYNKNIAKKIYVFFT--N----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCS-----CHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhc-----CHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEE
Confidence 455667778999998765 4677777653221 1100 11478888888864444 46777652 2 35999
Q ss_pred ccCCCCh
Q 004124 562 YSPNGSL 568 (772)
Q Consensus 562 y~~~GsL 568 (772)
|+++..|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987544
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.023 Score=62.85 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=45.4
Q ss_pred cccCccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcc-cceeEEEEcCCCc
Q 004124 484 GSFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPF 554 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNI-V~l~g~~~~~~~~ 554 (772)
..++.|....||+....+ +..+++|+..... . ...+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----T---ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----C---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----c---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 445567778999998753 4678888763211 0 1245578888887743333 56666543 2
Q ss_pred eEEEEEeccCCCCh
Q 004124 555 TRMMVFEYSPNGSL 568 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL 568 (772)
.+|+||+++.+|
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0062 Score=58.49 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=14.8
Q ss_pred CCCEEECccCC-CcccCChhhcCCCCCCEEEcCC
Q 004124 242 SLTTLLLDNNQ-YLGGISPELHVLKVISEIQVDE 274 (772)
Q Consensus 242 ~L~~L~l~~N~-~~G~iP~~~~~l~~L~~l~l~~ 274 (772)
+|++|+|+++. ++-.==..+..+++|+.|+|++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~ 148 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSD 148 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEES
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCC
Confidence 45555555442 3221112344555555555554
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.027 Score=60.73 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=23.3
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.++|+|+++.|||++++. +.|.||..+.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999998665 8999997643
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0088 Score=58.51 Aligned_cols=110 Identities=13% Similarity=0.157 Sum_probs=73.2
Q ss_pred CCcEEEEEecCC-CCcc----cCchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CC
Q 004124 168 DGKVVILNLRDL-CLGG----MLAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FP 234 (772)
Q Consensus 168 ~~~v~~l~L~~~-~l~G----~ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP 234 (772)
+..++.|+|+++ .++. .|...|..=+.|+.|+|++|.+... |-..+..=+.|+.|+|++|.++.. |-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345778888875 6653 2455666778899999999998732 334454557899999999988753 22
Q ss_pred cccCCCCCCCEEECccCC--Ccc-----cCChhhcCCCCCCEEEcCCCCC
Q 004124 235 SDFGNSFSLTTLLLDNNQ--YLG-----GISPELHVLKVISEIQVDESWL 277 (772)
Q Consensus 235 ~~l~~l~~L~~L~l~~N~--~~G-----~iP~~~~~l~~L~~l~l~~N~l 277 (772)
..+..-+.|+.|+|++|. ..| .|-..+..-+.|..|+++.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 334445678999997652 223 2334455667888888876643
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0053 Score=58.96 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=64.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCc-CcccCchhhcCC----CCCCEeeccCC-cCcccCCcccCCCCC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGEL----KELEILDLGFN-NFSGPFPSDFGNSFS 242 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~-l~G~iP~~l~~l----~~L~~L~ls~N-~l~G~iP~~l~~l~~ 242 (772)
-.++.|||++..++..=-..+..+++|++|+|+++. ++..-=..++.+ ++|+.|||+++ +++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 369999999998765433457899999999999985 765433456664 47999999996 476543345778999
Q ss_pred CCEEECccCC
Q 004124 243 LTTLLLDNNQ 252 (772)
Q Consensus 243 L~~L~l~~N~ 252 (772)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.027 Score=51.15 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=8.0
Q ss_pred cCCCCCCEEEcCCCCCC
Q 004124 262 HVLKVISEIQVDESWLT 278 (772)
Q Consensus 262 ~~l~~L~~l~l~~N~l~ 278 (772)
..+.+|+.|+|++|-+.
T Consensus 52 ~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 52 DALPALRTAHLGANPWR 68 (130)
T ss_dssp GGCTTCCEEECCSSCCB
T ss_pred hhccccCEEEecCCCee
Confidence 34444455555555443
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.2 Score=53.15 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
..++|+|+.+.||++++++.+.|.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 359999999999999988889999997643
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=94.64 E-value=0.065 Score=48.60 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=45.5
Q ss_pred CEEEcccCcCc-ccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCc
Q 004124 196 KSIILRNNSFF-GTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYL 254 (772)
Q Consensus 196 ~~L~L~~N~l~-G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~ 254 (772)
..++.+++.|+ -.+|..+. ++|+.|||++|+|+.--+..+..+++|+.|+|++|.|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 56776543 46999999999999533345678999999999999874
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.1 Score=51.52 Aligned_cols=98 Identities=18% Similarity=0.145 Sum_probs=63.1
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCCccccc
Q 004124 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA 644 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~~~~~~~a 644 (772)
-+|.+.|.. ...+++..++..++.|.+.+|.-+ +...+ ..+=+-|..|++..+|.+...+ ..+. .......+
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~~~~~~~ 105 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AGEPPPVA 105 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---ccccCCCC
Confidence 478888853 467899999999999999988776 22111 1222346899999999998875 2211 12233457
Q ss_pred hhhhccCCCCCCCchHHHHHHHHHHHc
Q 004124 645 MELLETSAVDLESNVYSFGTILFEMIT 671 (772)
Q Consensus 645 PE~~~~~~~s~ksDVwSfGvvL~ELlt 671 (772)
||... ...+.+.=|||+|+++|.-+-
T Consensus 106 pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 106 GKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred hhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 77642 344567789999999999886
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=93.29 E-value=0.048 Score=53.23 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=65.4
Q ss_pred CchhhcCCCCCCEEEcccC-cCccc----CchhhcCCCCCCEeeccCCcCccc----CCcccCCCCCCCEEECccCCCcc
Q 004124 185 LAPELGQLSELKSIILRNN-SFFGT----IPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYLG 255 (772)
Q Consensus 185 ip~~l~~l~~L~~L~L~~N-~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l~~l~~L~~L~l~~N~~~G 255 (772)
|..-+.+-+.|+.|+|++| .+... |-..+..-+.|+.|+|++|.+... |-..+..-+.|+.|+|++|.+..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3334556789999999986 77532 445566678999999999999743 22234345789999999999874
Q ss_pred c----CChhhcCCCCCCEEEcCCC
Q 004124 256 G----ISPELHVLKVISEIQVDES 275 (772)
Q Consensus 256 ~----iP~~~~~l~~L~~l~l~~N 275 (772)
. |-..+..-+.|+.|+|++|
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHHhhCCceeEEECCCC
Confidence 2 2334556778999999865
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=92.82 E-value=0.24 Score=54.05 Aligned_cols=17 Identities=18% Similarity=-0.060 Sum_probs=7.8
Q ss_pred hcCCCCCCEeeccCCcC
Q 004124 213 IGELKELEILDLGFNNF 229 (772)
Q Consensus 213 l~~l~~L~~L~ls~N~l 229 (772)
+.+|++|+.+++++|.+
T Consensus 267 F~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 267 FYYCPELAEVTTYGSTF 283 (401)
T ss_dssp TTTCTTCCEEEEESSCC
T ss_pred hhCCCCCCEEEeCCccc
Confidence 34444444444444443
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=89.44 E-value=0.79 Score=49.85 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=73.4
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCc----ccCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCC
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFF----GTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSL 243 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~----G~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L 243 (772)
.++.|.|. +++.---...+.++++|+.++|.+|.+. ..|+ ..+..|++|+.++|++ ++. .|+ ..+.+|++|
T Consensus 249 ~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L 325 (401)
T 4fdw_A 249 GITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKV 325 (401)
T ss_dssp CCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSC
T ss_pred CccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCc
Confidence 45667774 3343222345788999999999998875 1244 4677899999999994 455 344 457889999
Q ss_pred CEEECccCCCcccCC-hhhcCCCCCCEEEcCCCCCC
Q 004124 244 TTLLLDNNQYLGGIS-PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 244 ~~L~l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~ 278 (772)
+.++|..| ++ .|+ ..+.++ +|+.+++++|.+.
T Consensus 326 ~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 326 TQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CEEEECTT-CC-EECTTSSSSS-CCCEEEECCSSCC
T ss_pred cEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCCCCc
Confidence 99999666 33 343 356677 9999999999765
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=89.23 E-value=0.89 Score=49.83 Aligned_cols=28 Identities=18% Similarity=0.415 Sum_probs=24.6
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.++|+|+.+.||+ +.++.+.|.||..+.
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCC
Confidence 5899999999999 778899999997653
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=88.33 E-value=1.6 Score=47.43 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=23.6
Q ss_pred eEeeCCCCCCeEE------CCCCcEEEccccCcc
Q 004124 606 IAHRNLQSSSIYL------TEDYAAKISDFSFWN 633 (772)
Q Consensus 606 IvHrDLKp~NILl------d~~~~~kLsDFGla~ 633 (772)
++|+|+.+.|||+ +++..+++.||-++.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999997654
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.94 E-value=0.65 Score=33.22 Aligned_cols=29 Identities=28% Similarity=0.558 Sum_probs=16.8
Q ss_pred eeehhHHHHHHHHHHHHHHH-HHHhhcCcc
Q 004124 414 VLVLAGIIGGLSLILISAIG-FFVCRSSKV 442 (772)
Q Consensus 414 ~~i~~~~~~~~~~~~~~~~~-~~~~r~~~~ 442 (772)
..|+++++++++++++++++ ++++|+|+.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 35777887776655544444 555555443
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.84 E-value=0.67 Score=33.08 Aligned_cols=29 Identities=31% Similarity=0.596 Sum_probs=16.5
Q ss_pred eehhHHHHHHHHHHHHHHH-HHHhhcCccc
Q 004124 415 LVLAGIIGGLSLILISAIG-FFVCRSSKVV 443 (772)
Q Consensus 415 ~i~~~~~~~~~~~~~~~~~-~~~~r~~~~~ 443 (772)
.|+++++++++++++++++ ++++|+|+.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4677777766655444443 5555555443
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=80.07 E-value=1.3 Score=31.58 Aligned_cols=25 Identities=8% Similarity=0.396 Sum_probs=10.5
Q ss_pred ehhHHHHHHHHHHHHH-HHHHHhhcCc
Q 004124 416 VLAGIIGGLSLILISA-IGFFVCRSSK 441 (772)
Q Consensus 416 i~~~~~~~~~~~~~~~-~~~~~~r~~~ 441 (772)
+++++++ ++++++++ +.+++.|||+
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 4555555 33333333 3334444433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 772 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-49 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-44 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-44 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-42 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-42 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 6e-42 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 7e-42 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-41 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-41 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 9e-41 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-40 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 5e-40 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 8e-40 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 9e-40 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-39 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-38 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-38 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-37 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-37 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-36 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-36 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-36 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 9e-36 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 7e-35 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 9e-35 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-34 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-34 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-34 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 8e-34 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-33 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-33 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-33 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-32 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-31 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-31 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 8e-31 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-30 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-30 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-30 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-29 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-28 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-28 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-28 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-28 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 5e-28 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 6e-28 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-27 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 7e-27 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-26 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-26 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 5e-26 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-26 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-25 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-24 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 3e-24 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-22 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-21 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-20 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-19 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-17 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 8e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-11 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 3e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-06 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 0.003 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-09 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 5e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.002 | |
| d1z9ha1 | 161 | a.45.1.1 (A:213-373) Microsomal prostaglandin E sy | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.004 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.001 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d2ikka1 | 153 | d.190.1.2 (A:86-238) Hypothetical transcriptional | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 2e-49
Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
IGS G+ GTVYKG V + + + + F+ ++ L K H
Sbjct: 12 VGQRIGS---GSFGTVYKGKWHGDVAVKM-----LNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 598
N + +GY + +V ++ SL+ HLHI E + + IA A +++
Sbjct: 64 VNILLFMGYSTAPQLA---IVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDY 119
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF------WNNTTAAKT-----GSAAMEL 647
+H I HR+L+S++I+L ED KI DF W+ + + A E+
Sbjct: 120 LHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 648 LET---SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
+ + +S+VY+FG +L+E++TG++ YS N + + + P
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII-------FMVGRGYLSPD 230
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749
L + N + + ++ C+ +RP I A ++ + P
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 2e-44
Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 31/277 (11%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
IG G G V G G ++AV + F + ++++
Sbjct: 10 KLLQTIGK---GEFGDVMLGDYR-GNKVAVKCIK-------NDATAQAFLAEASVMTQLR 58
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
H N V L+G E++ +V EY GSL ++L + L L+ ++ + +E
Sbjct: 59 HSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------NTTAAKTGSAAMELLETS 651
++ HR+L + ++ ++ED AK+SDF +T A E L
Sbjct: 118 YLEG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 175
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711
+S+V+SFG +L+E+ + L++ KG + +
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFG-RVPYPRIPLKDVVPRVEKGYKM----------DAPDG 224
Query: 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748
+ V+KNC H D RPS + +L+ I E
Sbjct: 225 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 261
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 3e-44
Identities = 57/282 (20%), Positives = 113/282 (40%), Gaps = 38/282 (13%)
Query: 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
+G+ G G V+ G + ++AV K F + + + ++ H
Sbjct: 17 LVERLGA---GQFGEVWMGYYNGHTKVAV-----K-SLKQGSMSPDAFLAEANLMKQLQH 67
Query: 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 598
+ V L ++ + ++ EY NGSL + L L L +A +A +
Sbjct: 68 QRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAKTGSAAMELL 648
+ + HR+L++++I +++ + KI+DF A E +
Sbjct: 125 IEE--RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 649 ETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
++S+V+SFG +L E++T GRI Y + ++++
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT------------NPEVIQNLERGYRMV 230
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI-TAME 748
+N EEL +++ C P+ RP+ + + L++ TA E
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (388), Expect = 1e-42
Identities = 50/278 (17%), Positives = 106/278 (38%), Gaps = 35/278 (12%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
ED+ IG+ G+ G K S G + ++ + +++ L
Sbjct: 4 EDYEVLYTIGT---GSYGRCQKIRRKSDGKILVW---KELDYGSMTEAEKQMLVSEVNLL 57
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--IQEAEHLDWAMRLRIAMG 591
++ H N V + T +V EY G L + +E ++LD LR+
Sbjct: 58 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 117
Query: 592 MAYCLEHMHQL---TPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKT---- 640
+ L+ H+ + HR+L+ ++++L K+ DF ++T+ AK
Sbjct: 118 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 177
Query: 641 -GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699
+ E + + + +S+++S G +L+E+ ++ + ++
Sbjct: 178 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------------QKELAGK 225
Query: 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
I + + +EL +I ++ RPS+ I
Sbjct: 226 IREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 263
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 2e-42
Identities = 56/303 (18%), Positives = 114/303 (37%), Gaps = 51/303 (16%)
Query: 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFV 542
IG G G V++G G E+AV S + W +I + H+N +
Sbjct: 11 IGK---GRFGEVWRGKWR-GEEVAVKIFSSREERSW------FREAEIYQTVMLRHENIL 60
Query: 543 NLIGYCEEDEP--FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
I +D +V +Y +GSLF++L+ + +++A+ A L H+H
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLH 117
Query: 601 QL------TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-------------NTTAAKTG 641
P IAHR+L+S +I + ++ I+D N
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 642 SAAMELLETSA------VDLESNVYSFGTILFEMITGRISYSIENG--------SLENWA 687
A E+L+ S +++Y+ G + +E+ I + +
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237
Query: 688 SEYLKGEQPLKDIVDPTLKSFQEN--VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745
E ++ + + + P + + ++ L + +++ C + + R + I L +++
Sbjct: 238 VEEMR-KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
Query: 746 AME 748
E
Sbjct: 297 QQE 299
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 6e-42
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 39/283 (13%)
Query: 479 FSNIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534
F+ +IG G G VY GTL + AV SQF + +
Sbjct: 31 FNEVIGR---GHFGCVYHGTLLDNDGKKIHCAV----KSLNRITDIGEVSQFLTEGIIMK 83
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594
+H N ++L+G C E + ++V Y +G L + E + + + +A
Sbjct: 84 DFSHPNVLSLLGICLRSE-GSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAK 141
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSA----------- 643
++ + HR+L + + L E + K++DF + + S
Sbjct: 142 GMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 199
Query: 644 --AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701
A+E L+T +S+V+SFG +L+E++T + + + L+G + L+
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP-YPDVNTFDITVYLLQGRRLLQP-- 256
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E + L V+ C HP + RPS + +++ I
Sbjct: 257 --------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (382), Expect = 7e-42
Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 40/288 (13%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQF 526
+ SEL F IGS G G V+ G + ++A+ K E F
Sbjct: 2 IDPSELT-----FVQEIGS---GQFGLVHLGYWLNKDKVAI-----K-TIREGAMSEEDF 47
Query: 527 RKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRL 586
++ + + K++H V L G C E P +VFE+ +G L ++L Q L
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPI--CLVFEFMEHGCLSDYLRTQRGLF-AAETLL 104
Query: 587 RIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT------ 640
+ + + + ++ + + HR+L + + + E+ K+SDF +
Sbjct: 105 GMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162
Query: 641 ----GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696
A+ E+ S +S+V+SFG +++E+ + E +
Sbjct: 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-----------ENRSNSEV 211
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
++DI + ++ +C P+ RP+ + +L EI
Sbjct: 212 VEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 1e-41
Identities = 48/278 (17%), Positives = 105/278 (37%), Gaps = 37/278 (13%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
F +G+ G G V G ++A+ K E +F ++ + ++
Sbjct: 7 TFLKELGT---GQFGVVKYGKWRGQYDVAI-----K-MIKEGSMSEDEFIEEAKVMMNLS 57
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
H+ V L G C + P ++ EY NG L +L L + + +E
Sbjct: 58 HEKLVQLYGVCTKQRPI--FIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAME 114
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS----------AAMEL 647
++ HR+L + + + + K+SDF + S + E+
Sbjct: 115 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 648 LETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
L S +S++++FG +++E+ + G++ Y E + + I
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPY------------ERFTNSETAEHIAQGLRL 220
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E++ ++ +C H +RP+ + + + + ++
Sbjct: 221 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 151 bits (381), Expect = 2e-41
Identities = 55/290 (18%), Positives = 121/290 (41%), Gaps = 42/290 (14%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQ 525
++R+++ + +G G G VY+G + +AV K +
Sbjct: 14 MERTDIT-----MKHKLGG---GQYGEVYEGVWKKYSLTVAV-----K-TLKEDTMEVEE 59
Query: 526 FRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR 585
F K+ + ++ H N V L+G C + PF + E+ G+L ++L + + +
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--EFMTYGNLLDYLRECNRQEVSAVVL 117
Query: 586 LRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW----NNTTAAKTG 641
L +A ++ +E++ + HR+L + + + E++ K++DF +T A G
Sbjct: 118 LYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 642 SA------AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695
+ A E L + ++S+V++FG +L+E+ T +
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG------------MSPYPGIDLS 223
Query: 696 PLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ ++++ + E E++ +++ C +P RPS I + +
Sbjct: 224 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (375), Expect = 9e-41
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 30/270 (11%)
Query: 479 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
F IG G+ TVYKG + VE+A +K+ +F+++ + L +
Sbjct: 13 FDIEIGR---GSFKTVYKGLDTETTVEVAW---CELQDRKLTKSERQRFKEEAEMLKGLQ 66
Query: 538 HKNFVNLIGYCEE--DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
H N V E ++V E +G+L +L + + + +
Sbjct: 67 HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKG 124
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNTTAAKTGS-------AAMEL 647
L+ +H TPPI HR+L+ +I++T + KI D A+ + A E+
Sbjct: 125 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM 184
Query: 648 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
E D +VY+FG + EM T YS E + G +P S
Sbjct: 185 YEEK-YDESVDVYAFGMCMLEMATSEYPYS-ECQNAAQIYRRVTSGVKPA---------S 233
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
F + + E+ +I+ C+ + +R S++ +
Sbjct: 234 FDKVAIPEVKEIIEGCIRQNKDERYSIKDL 263
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 149 bits (377), Expect = 1e-40
Identities = 62/321 (19%), Positives = 119/321 (37%), Gaps = 65/321 (20%)
Query: 465 PKLKRSELEAACEDFS--NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRA 516
PKL LE + IG G G V++ +AV +
Sbjct: 3 PKLL--SLEYPRNNIEYVRDIGE---GAFGRVFQARAPGLLPYEPFTMVAVK----MLKE 53
Query: 517 DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH--- 573
+ S ++++ F+++ +++ ++ N V L+G C +P ++FEY G L E L
Sbjct: 54 EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMS 111
Query: 574 -------------------IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614
L A +L IA +A + ++ + HR+L +
Sbjct: 112 PHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE--RKFVHRDLATR 169
Query: 615 SIYLTEDYAAKISDFSFW-----------NNTTAAKTGSAAMELLETSAVDLESNVYSFG 663
+ + E+ KI+DF + A E + + ES+V+++G
Sbjct: 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG 229
Query: 664 TILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNC 723
+L+E+ + + + E+ + + D + + EN EL +++ C
Sbjct: 230 VVLWEIFSYGLQPY-----------YGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC 278
Query: 724 VHPDPKQRPSMRGIAAKLKEI 744
P RPS I L+ +
Sbjct: 279 WSKLPADRPSFCSIHRILQRM 299
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 5e-40
Identities = 55/294 (18%), Positives = 114/294 (38%), Gaps = 32/294 (10%)
Query: 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKS-RADWSKNLESQFRK 528
+E+ +C +IG+ G G VYKG L + ++K+ +A +++ F
Sbjct: 2 TEIHPSCVTRQKVIGA---GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG 58
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
+ + + +H N + L G + +P M++ EY NG+ + ++ + +
Sbjct: 59 EAGIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGA-LDKFLREKDGEFSVLQLVGM 115
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN---------NTTAAK 639
G+A ++++ HR+L + +I + + K+SDF TT+
Sbjct: 116 LRGIAAGMKYLAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 173
Query: 640 TGS---AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP 696
A E + S+V+SFG +++E++T E L +
Sbjct: 174 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE-----------LSNHEV 222
Query: 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750
+K I D + + ++ C + +RP I + L ++
Sbjct: 223 MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 276
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 8e-40
Identities = 57/299 (19%), Positives = 110/299 (36%), Gaps = 38/299 (12%)
Query: 465 PKLKRSELEAACEDFS--NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNL 522
L + E E +G G G V+ GT + +A+ K
Sbjct: 5 QGLAKDAWEIPRESLRLEVKLGQ---GCFGEVWMGTWNGTTRVAI-----K-TLKPGTMS 55
Query: 523 ESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDW 582
F ++ + K+ H+ V L E+ + +V EY GSL + L + ++L
Sbjct: 56 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRL 112
Query: 583 AMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW---------- 632
+ +A +A + ++ + HR+L++++I + E+ K++DF
Sbjct: 113 PQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 170
Query: 633 NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692
A E ++S+V+SFG +L E+ T +
Sbjct: 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP-----------YPGMV 219
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE-ITAMEPD 750
+ L + E L ++ C +P++RP+ + A L++ T+ EP
Sbjct: 220 NREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (368), Expect = 9e-40
Identities = 53/280 (18%), Positives = 107/280 (38%), Gaps = 41/280 (14%)
Query: 481 NIIGSFSDGTVGTVYKGTL---SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN 537
+GS G GTV KG +AV + L+ + + + + +++
Sbjct: 13 KELGS---GNFGTVKKGYYQMKKVVKTVAV---KILKNEANDPALKDELLAEANVMQQLD 66
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
+ V +IG CE + + M+V E + G L ++L + H+ + + ++ ++
Sbjct: 67 NPYIVRMIGICEAE---SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMK 121
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSA---AM 645
++ + HR+L + ++ L + AKISDF + A
Sbjct: 122 YLEE--SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
Query: 646 ELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
E + +S+V+SFG +++E + G+ Y G + KGE+
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERM-------- 229
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E+ ++ C D + RP + +L+
Sbjct: 230 --GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 2e-39
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 53/309 (17%)
Query: 462 TGVPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSG---VEIAVTSTSVKSRADW 518
T P L ++++ F ++IG G G V K + ++ A+ + +
Sbjct: 2 TIYPVLDWNDIK-----FQDVIGE---GNFGQVLKARIKKDGLRMDAAI----KRMKEYA 49
Query: 519 SKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH---- 573
SK+ F +++ L K+ +H N +NL+G CE + EY+P+G+L + L
Sbjct: 50 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRV 107
Query: 574 ----------IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623
A L L A +A ++++ Q HR+L + +I + E+Y
Sbjct: 108 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYV 165
Query: 624 AKISDFSF---WNNTTAAKTGS-----AAMELLETSAVDLESNVYSFGTILFEMITGRIS 675
AKI+DF G A+E L S S+V+S+G +L+E+++ +
Sbjct: 166 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 225
Query: 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+ + +G + N +E+ +++ C P +RPS
Sbjct: 226 PY-CGMTCAELYEKLPQGYRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFA 274
Query: 736 GIAAKLKEI 744
I L +
Sbjct: 275 QILVSLNRM 283
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (355), Expect = 4e-38
Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 34/271 (12%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
EDF +G G G VY S +A+ + +E Q R++++
Sbjct: 6 EDFEIGRPLGK---GKFGNVYLAREKQSKFILALKV--LFKAQLEKAGVEHQLRREVEIQ 60
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
S + H N + L GY + ++ EY+P G+++ L + D +A
Sbjct: 61 SHLRHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELA 116
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----WNNTTAAKTGS---AAME 646
L + H + HR+++ ++ L KI+DF + ++ G+ E
Sbjct: 117 NALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 174
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
++E D + +++S G + +E + G+ + E + + + E D V +
Sbjct: 175 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFPDFVTEGAR 232
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
I + +P QRP +R +
Sbjct: 233 DL-----------ISRLLKHNPSQRPMLREV 252
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (355), Expect = 5e-38
Identities = 45/278 (16%), Positives = 103/278 (37%), Gaps = 41/278 (14%)
Query: 483 IGSFSDGTVGTVYKGTL---SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
+G G G+V +G +++A+ + K + ++ + ++++
Sbjct: 17 LGC---GNFGSVRQGVYRMRKKQIDVAI----KVLKQGTEKADTEEMMREAQIMHQLDNP 69
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 599
V LIG C+ + +V E + G L + L + E + + + ++ ++++
Sbjct: 70 YIVRLIGVCQAEALM---LVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYL 125
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSA---AMEL 647
+ HR+L + ++ L + AKISDF + +A A E
Sbjct: 126 EE--KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 183
Query: 648 LETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
+ S+V+S+G ++E ++ G+ Y G + + I
Sbjct: 184 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG------------PEVMAFIEQGKRM 231
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
EL ++ +C + RP + +++
Sbjct: 232 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 2e-37
Identities = 53/305 (17%), Positives = 111/305 (36%), Gaps = 53/305 (17%)
Query: 472 LEAACEDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRK 528
+E +DF + +G+ G G V+K + SG+ +A + + +Q +
Sbjct: 1 MELKDDDFEKISELGA---GNGGVVFKVSHKPSGLVMARK----LIHLEIKPAIRNQIIR 53
Query: 529 KIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
++ L + N V G D + E+ GSL + L +A + + ++
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEI--SICMEHMDGGSLDQVLK--KAGRIPEQILGKV 109
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----SFWNNTTAAKTGS-- 642
++ + L ++ + I HR+++ S+I + K+ DF ++ + G+
Sbjct: 110 SIAVIKGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 643 -AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN--------------------- 680
+ E L+ + ++S+++S G L EM GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 681 --GSLENWASEYLKGEQPLKDIVD--------PTLKSFQENVLEELLVVIKNCVHPDPKQ 730
+ S Y +P I + P K E + C+ +P +
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 731 RPSMR 735
R ++
Sbjct: 289 RADLK 293
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 139 bits (351), Expect = 3e-37
Identities = 51/290 (17%), Positives = 107/290 (36%), Gaps = 35/290 (12%)
Query: 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKK 529
E++ +C +IG+ G G V G L + + ++ +++ F +
Sbjct: 21 KEIDISCVKIEQVIGA---GEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE 77
Query: 530 IDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA 589
+ + +H N ++L G + P M++ E+ NGSL Q + +
Sbjct: 78 ASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLD-SFLRQNDGQFTVIQLVGML 134
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW--------NNTTAAKTG 641
G+A ++++ HR+L + +I + + K+SDF + T + G
Sbjct: 135 RGIAAGMKYLAD--MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 192
Query: 642 SA------AMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694
A E ++ S+V+S+G +++E+++ G Y +
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN------------Q 240
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
+ I + L ++ +C D RP I L ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 1e-36
Identities = 51/281 (18%), Positives = 103/281 (36%), Gaps = 38/281 (13%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ IG G G V++G S + +A+ + S ++ +F ++ T+
Sbjct: 10 ELGRCIGE---GQFGDVHQGIYMSPENPALAVAI----KTCKNCTSDSVREKFLQEALTM 62
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
+ +H + V LIG E+ + ++ E G L LD A + A ++
Sbjct: 63 RQFDHPHIVKLIGVITENPVW---IIMELCTLGELRSF-LQVRKYSLDLASLILYAYQLS 118
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW---NNTTAAKTGSA------- 643
L ++ HR++ + ++ ++ + K+ DF ++T K
Sbjct: 119 TALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703
A E + S+V+ FG ++E++ + + + GE+
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERL------- 228
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
N L ++ C DP +RP + A+L I
Sbjct: 229 ---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 136 bits (344), Expect = 3e-36
Identities = 60/308 (19%), Positives = 115/308 (37%), Gaps = 54/308 (17%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSK 520
+ R ++ S +G G+ G VY+G +A+ S
Sbjct: 17 VAREKIT-----MSRELGQ---GSFGMVYEGVAKGVVKDEPETRVAIK----TVNEAASM 64
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ----- 575
+F + + + N + V L+G + +P +++ E G L +L
Sbjct: 65 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMA 122
Query: 576 ---EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632
+ +++A +A + +++ HR+L + + + ED+ KI DF
Sbjct: 123 NNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMT 180
Query: 633 NNTTAAKT-----------GSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG 681
+ + E L+ S+V+SFG +L+E+ T
Sbjct: 181 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA-------- 232
Query: 682 SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741
+ L EQ L+ +++ L +N + L +++ C +PK RPS I + +
Sbjct: 233 ---EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 289
Query: 742 KEITAMEP 749
KE MEP
Sbjct: 290 KEE--MEP 295
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 3e-36
Identities = 59/279 (21%), Positives = 102/279 (36%), Gaps = 39/279 (13%)
Query: 483 IGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
+G G+ G V +G SG ++V +K F ++++ + ++H+N
Sbjct: 16 LGD---GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
+ L G MV E +P GSL + + H R A+ +A + ++
Sbjct: 73 LIRLYGVVLTPPMK---MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS------------AAMELL 648
HR+L + ++ L KI DF A E L
Sbjct: 129 S--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 649 ETSAVDLESNVYSFGTILFEMIT-GRISYSIENGS--LENWASEYLKGEQPLKDIVDPTL 705
+T S+ + FG L+EM T G+ + NGS L E + +P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP--------- 237
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
E+ +++ V+ C P+ RP+ + L E
Sbjct: 238 ----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 5e-36
Identities = 55/276 (19%), Positives = 95/276 (34%), Gaps = 35/276 (12%)
Query: 477 EDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK 535
EDF IIG DG G VYK + V A KS + + +ID L+
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-----DYMVEIDILAS 65
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
+H N V L+ + ++ E+ G++ + E L + +
Sbjct: 66 CDHPNIVKLLDAFYYENNL--WILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDA 122
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF---------WNNTTAAKTGSAAME 646
L ++H I HR+L++ +I T D K++DF ++ A E
Sbjct: 123 LNYLHDN--KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 180
Query: 647 LL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701
++ + D +++V+S G L EM + N + K E P
Sbjct: 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTLA-- 236
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+K C+ + R + +
Sbjct: 237 ------QPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 9e-36
Identities = 63/312 (20%), Positives = 112/312 (35%), Gaps = 60/312 (19%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSK 520
R+ L F +G+ G G V + T + + +AV +
Sbjct: 20 FPRNRLS-----FGKTLGA---GAFGKVVEATAYGLIKSDAAMTVAVK----MLKPSAHL 67
Query: 521 NLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH------ 573
++ LS + NH N VNL+G C P +++ EY G L L
Sbjct: 68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVITEYCCYGDLLNFLRRKRDSF 125
Query: 574 ----------IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623
+ LD L + +A + + HR+L + +I LT
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNILLTHGRI 183
Query: 624 AKISDF----SFWNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITG 672
KI DF N++ G+A A E + ES+V+S+G L+E+ +
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL 243
Query: 673 RISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
S +++ + +K + E+ E+ ++K C DP +RP
Sbjct: 244 GSSPY-PGMPVDSKFYKMIKEGFRML---------SPEHAPAEMYDIMKTCWDADPLKRP 293
Query: 733 SMRGIAAKLKEI 744
+ + I +++
Sbjct: 294 TFKQIVQLIEKQ 305
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 132 bits (334), Expect = 7e-35
Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 33/272 (12%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ FS++ IG G+ G VY + + +A+ S + K++ L
Sbjct: 15 KLFSDLREIGH---GSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFL 69
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
K+ H N + G + +V EY + L + L + G
Sbjct: 70 QKLRHPNTIQYRGCYLREHTA--WLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGAL 125
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKT-----GSAAMELL 648
L ++H + HR++++ +I L+E K+ DF + A + A E++
Sbjct: 126 QGLAYLHSH--NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVI 183
Query: 649 ETS---AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
D + +V+S G E+ + N + + + E P
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL--FNMNAMSALYHIAQNESPALQ------ 235
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ E + +C+ P+ RP+ +
Sbjct: 236 ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 9e-35
Identities = 65/311 (20%), Positives = 117/311 (37%), Gaps = 53/311 (17%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSV----KSRADWSKNL 522
L R L +G G G V + + ++D ++
Sbjct: 10 LPRDRLV-----LGKPLGE---GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61
Query: 523 ESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ------ 575
S +++ + + HKN +NL+G C +D P ++ EY+ G+L E+L +
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLE 119
Query: 576 --------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKIS 627
E L + A +A +E++ HR+L + ++ +TED KI+
Sbjct: 120 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIA 177
Query: 628 DFSFWNNTTAAKT-----------GSAAMELLETSAVDLESNVYSFGTILFEMITGRISY 676
DF + A E L +S+V+SFG +L+E+ T S
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
Query: 677 SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
+ E+ K + + N EL +++++C H P QRP+ +
Sbjct: 238 Y-----------PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 286
Query: 737 IAAKLKEITAM 747
+ L I A+
Sbjct: 287 LVEDLDRIVAL 297
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 2e-34
Identities = 43/282 (15%), Positives = 104/282 (36%), Gaps = 34/282 (12%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+F ++GS G GTVYKG + G ++ + + R S + + +
Sbjct: 9 TEFKKIKVLGS---GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
+ V++ + L+G C ++ + P G L ++ + +++ L + +A
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIA 121
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGSA----- 643
+ ++ + HR+L + ++ + KI+DF G
Sbjct: 122 KGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 644 -AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702
A+E + +S+V+S+G ++E++T + + + + +
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFG-----------SKPYDGIPASEISSILEK 228
Query: 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
++ +++ C D RP R + + ++
Sbjct: 229 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 3e-34
Identities = 60/303 (19%), Positives = 114/303 (37%), Gaps = 45/303 (14%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
EDF I+G G+ TV L++ E A+ ++ R +N ++ D +
Sbjct: 8 EDFKFGKILGE---GSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVM 62
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
S+++H FV L ++DE Y+ NG L +++ + D +
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKL--YFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIV 118
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN-----------NTTAAKTGS 642
LE++H I HR+L+ +I L ED +I+DF N+
Sbjct: 119 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 176
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702
+ ELL + S++++ G I+++++ G + G+ + +K E +
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKLEYDFPEKFF 234
Query: 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWA 762
P + ++ + D +R +E+ P A P + W
Sbjct: 235 PKARDL-----------VEKLLVLDATKRLGC-------EEMEGYGPLKAHPFFESVTWE 276
Query: 763 ELE 765
L
Sbjct: 277 NLH 279
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 8e-34
Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 35/265 (13%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
IG G GTVY +++G E+A+ +++ + + +I + + + N
Sbjct: 28 IGQ---GASGTVYTAMDVATGQEVAIRQMNLQQQPK-----KELIINEILVMRENKNPNI 79
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
VN + + +V EY GSL + + +D + LE +H
Sbjct: 80 VNYLDSYLVGDEL--WVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHS 134
Query: 602 LTPPIAHRNLQSSSIYLTEDYAAKISDFSF------WNNTTAAKTGS---AAMELLETSA 652
+ HR+++S +I L D + K++DF F + + G+ A E++ A
Sbjct: 135 N--QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 653 VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712
+ +++S G + EMI G Y EN + YL ++ +P E +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRALYLIATNGTPELQNP------EKL 242
Query: 713 LEELLVVIKNCVHPDPKQRPSMRGI 737
+ C+ D ++R S + +
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 8e-34
Identities = 53/276 (19%), Positives = 99/276 (35%), Gaps = 38/276 (13%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
ED+ +G G G V + +AV +K D + +K+I
Sbjct: 5 EDWDLVQTLGE---GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----NIKKEICIN 57
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
+NH+N V G+ E + EY G LF+ + + R +
Sbjct: 58 KMLNHENVVKFYGHRREGNIQ--YLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLM 113
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGSA----- 643
+ ++H + I HR+++ ++ L E KISDF +NN
Sbjct: 114 AGVVYLHGI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 644 -AMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701
A ELL+ +V+S G +L M+ G + + + S + ++
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS----------DWKE 221
Query: 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
T + + + L ++ + +P R ++ I
Sbjct: 222 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 257
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 2e-33
Identities = 56/306 (18%), Positives = 109/306 (35%), Gaps = 64/306 (20%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKID 531
+F ++GS G G V T +++AV + + ++
Sbjct: 40 EFGKVLGS---GAFGKVMNATAYGISKTGVSIQVAV----KMLKEKADSSEREALMSELK 92
Query: 532 TLSKV-NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLH----------------- 573
++++ +H+N VNL+G C P ++FEY G L +L
Sbjct: 93 MMTQLGSHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 150
Query: 574 ----IQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629
++ L + L A +A +E + HR+L + ++ +T KI DF
Sbjct: 151 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDF 208
Query: 630 SFW-----------NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYS 677
A E L ++S+V+S+G +L+E+ + G Y
Sbjct: 209 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 268
Query: 678 IENGSLENWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
+ ++ K EE+ +++++C D ++RPS
Sbjct: 269 GIPV------------DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 316
Query: 737 IAAKLK 742
+ + L
Sbjct: 317 LTSFLG 322
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 129 bits (324), Expect = 3e-33
Identities = 58/273 (21%), Positives = 100/273 (36%), Gaps = 37/273 (13%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
D +G+ G G V++ T ++G A +D + RK+I T+S +
Sbjct: 29 DIHEELGT---GAFGVVHRVTERATGNNFAAKFVMTPHESD-----KETVRKEIQTMSVL 80
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
H VNL E+D +M++E+ G LFE + E + + + L
Sbjct: 81 RHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGL 137
Query: 597 EHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFSF--------WNNTTAAKTGSAAME 646
HMH+ H +L+ +I T K+ DF T AA E
Sbjct: 138 CHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 195
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDIVDPT 704
+ E V ++++S G + + +++G + EN L N S + +
Sbjct: 196 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 255
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
K F I+ + DP R ++
Sbjct: 256 GKDF-----------IRKLLLADPNTRMTIHQA 277
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 126 bits (317), Expect = 6e-33
Identities = 60/285 (21%), Positives = 105/285 (36%), Gaps = 44/285 (15%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAV----TSTSVKSRADWSKNLESQFRKK 529
E++ I+G G V + + E AV + A+ + L K+
Sbjct: 3 ENYEPKEILGR---GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 59
Query: 530 IDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRI 588
+D L KV+ H N + L E + F +VF+ G LF++L E L +I
Sbjct: 60 VDILRKVSGHPNIIQLKDTYETNTFF--FLVFDLMKKGELFDYLT--EKVTLSEKETRKI 115
Query: 589 AMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW--------NNTTAAKT 640
+ + +H+L I HR+L+ +I L +D K++DF F
Sbjct: 116 MRALLEVICALHKL--NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP 173
Query: 641 GSAAMELLETSAVDL------ESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLK 692
A E++E S D E +++S G I++ ++ G + L S +
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 233
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
P D T+K + + P++R +
Sbjct: 234 FGSPEWDDYSDTVKDL-----------VSRFLVVQPQKRYTAEEA 267
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 126 bits (318), Expect = 2e-32
Identities = 48/268 (17%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+GS G G V++ ++G + D + + +I +++++H
Sbjct: 37 LGS---GAFGVVHRCVEKATGRVFVAKFINTPYPLD-----KYTVKNEISIMNQLHHPKL 88
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
+NL E+ +++ E+ G LF+ + E + A + L+HMH+
Sbjct: 89 INLHDAFEDKYEM--VLILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHE 145
Query: 602 LTPPIAHRNLQSSSIYL--TEDYAAKISDFSF-----WNNTTAAKTGSA---AMELLETS 651
I H +++ +I + + KI DF + T +A A E+++
Sbjct: 146 H--SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 203
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDIVDPTLKSFQ 709
V +++++ G + + +++G ++ E+ L+N + ++ V P K F
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF- 262
Query: 710 ENVLEELLVVIKNCVHPDPKQRPSMRGI 737
IKN + +P++R ++
Sbjct: 263 ----------IKNLLQKEPRKRLTVHDA 280
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 3e-31
Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 38/268 (14%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+G G G V++ SS VK + +K+I L+ H+N
Sbjct: 13 LGR---GEFGIVHRCVETSSKKTYMAKFVKVKGTD------QVLVKKEISILNIARHRNI 63
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
++L E E +M+FE+ +FE ++ A L+ + + L+ +H
Sbjct: 64 LHLHESFESMEEL--VMIFEFISGLDIFERIN-TSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 602 LTPPIAHRNLQSSSIYLT--EDYAAKISDFSF--------WNNTTAAKTGSAAMELLETS 651
I H +++ +I KI +F A E+ +
Sbjct: 121 H--NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 652 AVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDIVDPTLKSFQ 709
V ++++S GT+++ +++G + E +EN + ++ + F
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF- 237
Query: 710 ENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ + + K R +
Sbjct: 238 ----------VDRLLVKERKSRMTASEA 255
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 121 bits (303), Expect = 4e-31
Identities = 50/279 (17%), Positives = 104/279 (37%), Gaps = 34/279 (12%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
I+G G + V+ L ++AV +++ + +FR++ + +NH
Sbjct: 14 ILGF---GGMSEVHLARDLRLHRDVAVKV--LRADLARDPSFYLRFRREAQNAAALNHPA 68
Query: 541 FVNLIGYCEEDEPFTR--MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEH 598
V + E + P +V EY +L + +H + + + L
Sbjct: 69 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNF 126
Query: 599 MHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN------------NTTAAKTGSAAME 646
HQ I HR+++ ++I ++ A K+ DF + E
Sbjct: 127 SHQ--NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 184
Query: 647 LLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706
+VD S+VYS G +L+E++TG + S + A ++++ +
Sbjct: 185 QARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQHVREDPIPPSARHE--- 239
Query: 707 SFQENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEI 744
+ +L V+ + +P+ R + + A L +
Sbjct: 240 ----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 274
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 120 bits (303), Expect = 8e-31
Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 34/272 (12%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
DF +++G+ G V + +A+ + E +I L K+
Sbjct: 12 DFRDVLGT---GAFSEVILAEDKRTQKLVAIK----CIAKKALEGKEGSMENEIAVLHKI 64
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
H N V L E ++ + G LF+ + E R+ + +
Sbjct: 65 KHPNIVALDDIYESGGHL--YLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAV 120
Query: 597 EHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFW-----NNTTAAKTGS---AAM 645
+++H I HR+L+ ++ ED ISDF + + G+ A
Sbjct: 121 KYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 178
Query: 646 ELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705
E+L + +S G I + ++ G + EN + LK E
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN--DAKLFEQILKAEYEFD------- 229
Query: 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ +++ + I++ + DP++R +
Sbjct: 230 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 120 bits (301), Expect = 2e-30
Identities = 51/273 (18%), Positives = 95/273 (34%), Gaps = 33/273 (12%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+DF +G+ G+ G V+ +G A+ +K + L
Sbjct: 4 QDFQILRTLGT---GSFGRVHLIRSRHNGRYYAMKV--LKKEIVVRLKQVEHTNDERLML 58
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
S V H + + G ++ + M+ +Y G LF L + + A +
Sbjct: 59 SIVTHPFIIRMWGTFQDAQQI--FMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVC 114
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------NNTTAAKTGSAAMEL 647
LE++H I +R+L+ +I L ++ KI+DF F T A E+
Sbjct: 115 LALEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEV 172
Query: 648 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
+ T + + +SFG +++EM+ G + N + L E + +K
Sbjct: 173 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--TMKTYEKILNAELRFPPFFNEDVKD 230
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
+ + D QR +
Sbjct: 231 L-----------LSRLITRDLSQRLGNLQNGTE 252
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 5e-30
Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 55/309 (17%)
Query: 467 LKRSELEAACEDFSNIIGSFSDGTVGTVYKGT------LSSGVEIAVTSTSVKSRADWSK 520
R L+ +G G G V + ++ +AV + +
Sbjct: 10 FPRDRLK-----LGKPLGR---GAFGQVIEADAFGIDKTATCRTVAVK----MLKEGATH 57
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAE-- 578
+ ++ L + H V + M++ E+ G+L +L + E
Sbjct: 58 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 117
Query: 579 ------------HLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626
L + + +A +E + HR+L + +I L+E KI
Sbjct: 118 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKI 175
Query: 627 SDFSF----WNNTTAAKTGSA-------AMELLETSAVDLESNVYSFGTILFEMITGRIS 675
DF + + + G A A E + ++S+V+SFG +L+E+ + S
Sbjct: 176 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 235
Query: 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
E + +G + + E+ + +C H +P QRP+
Sbjct: 236 PYPGVKIDEEFCRRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFS 285
Query: 736 GIAAKLKEI 744
+ L +
Sbjct: 286 ELVEHLGNL 294
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 119 bits (300), Expect = 6e-30
Identities = 55/277 (19%), Positives = 91/277 (32%), Gaps = 33/277 (11%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKS-RADWSKNLESQFRKKIDT 532
DFS IIG G G VY +G A+ K + + L R +
Sbjct: 4 NDFSVHRIIGR---GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 60
Query: 533 LSKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 592
+S + V + + + + G L HL A +
Sbjct: 61 VSTGDCPFIVCMSYAFHTPDKL--SFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAEI 116
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTG--------SAA 644
LEHMH + +R+L+ ++I L E +ISD + + K A
Sbjct: 117 ILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAP 174
Query: 645 MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLKDIVDP 703
L + A D ++ +S G +LF+++ G + L L D P
Sbjct: 175 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP 234
Query: 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
L+S ++ + D +R G A+
Sbjct: 235 ELRSL-----------LEGLLQRDVNRRLGCLGRGAQ 260
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (290), Expect = 4e-29
Identities = 46/281 (16%), Positives = 99/281 (35%), Gaps = 35/281 (12%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
+ +G G TVYK ++ +A+ + R++ + ++I L +++H
Sbjct: 4 DFLGE---GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 60
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 599
N + L+ +VF++ + + L + + LE++
Sbjct: 61 NIIGLLDAFGHKSNI--SLVFDFMETDLEV--IIKDNSLVLTPSHIKAYMLMTLQGLEYL 116
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELLE 649
HQ I HR+L+ +++ L E+ K++DF + + + A L
Sbjct: 117 HQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG 174
Query: 650 TSAVDLESNVYSFGTILFEMITGR--------------ISYSIENGSLENWASEY-LKGE 694
+ ++++ G IL E++ I ++ + E W L
Sbjct: 175 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 234
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
K L ++LL +I+ +P R +
Sbjct: 235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITAT 275
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 1e-28
Identities = 53/272 (19%), Positives = 95/272 (34%), Gaps = 35/272 (12%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
EDF ++G G+ G V+ + A+ + K ++E +K
Sbjct: 2 EDFILHKMLGK---GSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMVEKRVLS 57
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
H ++ + E +M EY G L H IQ D + A +
Sbjct: 58 LAWEHPFLTHMFCTFQTKENLFFVM--EYLNGGDLMYH--IQSCHKFDLSRATFYAAEII 113
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW---------NNTTAAKTGSAA 644
L+ +H I +R+L+ +I L +D KI+DF NT A
Sbjct: 114 LGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIA 171
Query: 645 MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
E+L + + +SFG +L+EM+ G+ + ++ E ++
Sbjct: 172 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIRMDNPFYPRWLEKE 229
Query: 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRG 736
K + +P++R +RG
Sbjct: 230 AKDL-----------LVKLFVREPEKRLGVRG 250
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (284), Expect = 2e-28
Identities = 43/282 (15%), Positives = 90/282 (31%), Gaps = 40/282 (14%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
IGS G+ G +Y GT +++G E+A+ VK++ Q + +
Sbjct: 15 IGS---GSFGDIYLGTDIAAGEEVAIKLECVKTKHP-------QLHIESKIYKMMQGGVG 64
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
+ I +C + + +MV E L + L +A M +E++H
Sbjct: 65 IPTIRWCGAEGDY-NVMVMELLGPSLED--LFNFCSRKFSLKTVLLLADQMISRIEYIHS 121
Query: 602 LTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNTTAAKTGS---------------- 642
HR+++ + + I DF A+T
Sbjct: 122 KN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702
A++ ++ S G +L G + + A++ K E+ + +
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK-----AATKRQKYERISEKKMS 234
Query: 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
++ + E + C +P + + +
Sbjct: 235 TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 2e-28
Identities = 46/275 (16%), Positives = 106/275 (38%), Gaps = 43/275 (15%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLE--SQFRKKIDTLSKV-N 537
++G G G V + + + A+ K L+ + R++++ +
Sbjct: 19 VLGL---GINGKVLQIFNKRTQEKFAL------------KMLQDCPKARREVELHWRASQ 63
Query: 538 HKNFVNLIGYCEEDEPFTR--MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
+ V ++ E + ++V E G LF + + + I +
Sbjct: 64 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 123
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNTTAAKTGS--------AA 644
++++H + IAHR+++ ++ T + K++DF F TT+ + + A
Sbjct: 124 IQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 181
Query: 645 MELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDIVD 702
E+L D +++S G I++ ++ G + +G + G+ +
Sbjct: 182 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 241
Query: 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
V EE+ ++I+N + +P QR ++
Sbjct: 242 S-------EVSEEVKMLIRNLLKTEPTQRMTITEF 269
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 113 bits (282), Expect = 3e-28
Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 38/283 (13%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
IG GT G VYK + G A+ ++ + + S ++I L ++ H N
Sbjct: 8 EKIGE---GTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSN 61
Query: 541 FVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600
V L ++VFE+ L L+ + + + + H
Sbjct: 62 IVKLYDVIHTK--KRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 601 QLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELLET 650
+ HR+L+ ++ + + KI+DF + + A L+ +
Sbjct: 118 D--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 651 SAVDLESNVYSFGTILFEMITGR--------------ISYSIENGSLENWA--SEYLKGE 694
+++S G I EM+ G I + + +NW +E K +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+SF + + E + ++ + DP QR + +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (282), Expect = 5e-28
Identities = 48/283 (16%), Positives = 92/283 (32%), Gaps = 31/283 (10%)
Query: 481 NIIGSFSDGTVGTVYKGT--LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538
IG G G V+K + G +A+ V++ + + + L H
Sbjct: 13 AEIGE---GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 69
Query: 539 KNFVNLIGYCEEDEP--FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
N V L C T++ + + L +L + + + L
Sbjct: 70 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF--------WNNTTAAKTGSAAMELL 648
+ +H + HR+L+ +I +T K++DF + A E+L
Sbjct: 130 DFLHSH--RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 187
Query: 649 ETSAVDLESNVYSFGTILFEMITGR--------------ISYSIENGSLENWASEYLKGE 694
S+ +++S G I EM + I I E+W +
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247
Query: 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
Q ++ F ++ E ++ C+ +P +R S
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 6e-28
Identities = 51/277 (18%), Positives = 103/277 (37%), Gaps = 33/277 (11%)
Query: 477 EDFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQ-FRKKIDTLS 534
+D+ + G V K S+G++ A + + + + +++ L
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAY 594
++ H N + L E +++ E G LF+ L E E L +
Sbjct: 69 EIQHPNVITLHEVYENKTDV--ILILELVAGGELFDFLA--EKESLTEEEATEFLKQILN 124
Query: 595 CLEHMHQLTPPIAHRNLQSSSIYLTEDYAA----KISDFSF-----WNNTTAAKTGS--- 642
+ ++H IAH +L+ +I L + KI DF + N G+
Sbjct: 125 GVYYLHS--LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS--LENWASEYLKGEQPLKDI 700
A E++ + LE++++S G I + +++G + + L N ++ + E
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
K F I+ + DPK+R +++
Sbjct: 243 TSALAKDF-----------IRRLLVKDPKKRMTIQDS 268
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 5e-27
Identities = 48/293 (16%), Positives = 100/293 (34%), Gaps = 48/293 (16%)
Query: 478 DFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
+ +IG+ G+ G VY+ L SG +A+ R +++ + K+
Sbjct: 23 TDTKVIGN---GSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKL 70
Query: 537 NHKNFVNLIGYC----EEDEPFTRMMVFEYSPNGSLFEHLH-IQEAEHLDWAMRLRIAMG 591
+H N V L + E+ + +V +Y P H + + L
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 592 MAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDF---------SFWNNTTAAKTG 641
+ L ++H I HR+++ ++ L D K+ DF + ++
Sbjct: 131 LFRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 642 SAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-----------------SLE 684
A + + +V+S G +L E++ G+ + ++G +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
Y + + P + P K F+ E + + + P R +
Sbjct: 249 EMNPNYTEFKFP-QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (272), Expect = 7e-27
Identities = 51/290 (17%), Positives = 99/290 (34%), Gaps = 40/290 (13%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
E+F IG GT G VYK +G +A+ + + ++ + S ++I L
Sbjct: 2 ENFQKVEKIGE---GTYGVVYKARNKLTGEVVALKKIRLDTE---TEGVPSTAIREISLL 55
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
++NH N V L+ + +VFE+ + L + + + + +
Sbjct: 56 KELNHPNIVKLLDVIHTENKL--YLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF----------SFWNNTTAAKTGSA 643
L H + HR+L+ ++ + + A K++DF + + A
Sbjct: 113 QGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 644 AMELLETSAVDLESNVYSFGTILFEMITGR--------------ISYSIENGSLENWASE 689
LL +++S G I EM+T R I ++ W
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 690 YLKGE--QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ + E+ ++ +H DP +R S +
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 107 bits (269), Expect = 2e-26
Identities = 35/284 (12%), Positives = 86/284 (30%), Gaps = 42/284 (14%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
IG G+ G +++GT L + ++A+ +S A Q R + T +
Sbjct: 13 IGE---GSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-------QLRDEYRTYKLLAGCTG 62
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ 601
+ + Y ++ ++V + G E L A M ++ +H+
Sbjct: 63 IPNVYYFGQEGLH-NVLVIDL--LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 119
Query: 602 LTPPIAHRNLQSSSIYLTEDYA-----AKISDFSF-------------WNNTTAAKTGSA 643
+ +R+++ + + + + DF +G+A
Sbjct: 120 K--SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177
Query: 644 ---AMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700
++ ++ + G + + G + + A+ K E+ +
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW-----QGLKAATNKQKYERIGEKK 232
Query: 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744
L+ EE + + P + ++
Sbjct: 233 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 4e-26
Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 46/291 (15%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
+ IG G G V + V +A+ S + + + ++I L + H+
Sbjct: 14 SYIGE---GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ----RTLREIKILLRFRHE 66
Query: 540 NFVNLIGYCEEDEPFTRMMVF--EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
N + + V+ + L++ L Q HL + L+
Sbjct: 67 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLK 123
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF------------WNNTTAAKTGSAAM 645
++H + HR+L+ S++ L KI DF + A A
Sbjct: 124 YIHSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 181
Query: 646 ELLETSAVDLES-NVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704
E++ S +S +++S G IL EM++ R + ++ + + G +D+
Sbjct: 182 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 241
Query: 705 ------------------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
N + L ++ + +P +R +
Sbjct: 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 5e-26
Identities = 50/283 (17%), Positives = 97/283 (34%), Gaps = 42/283 (14%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+GS G G V +G ++A+ R S+ + +++ L + H+N
Sbjct: 26 VGS---GAYGAVCSAVDGRTGAKVAI---KKLYRPFQSELFAKRAYRELRLLKHMRHENV 79
Query: 542 VNLIGYCEEDEPFTR----MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
+ L+ DE +V + + + + E L + M L
Sbjct: 80 IGLLDVFTPDETLDDFTDFYLVMPFMGT----DLGKLMKHEKLGEDRIQFLVYQMLKGLR 135
Query: 598 HMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGS-------AAMELLET 650
++H HR+L+ ++ + ED KI DF + TG A +L
Sbjct: 136 YIHAAGII--HRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNW 193
Query: 651 SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP-------------- 696
+++S G I+ EMITG+ + + + + G P
Sbjct: 194 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253
Query: 697 ----LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
L ++ S N + +++ + D +QR +
Sbjct: 254 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 296
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 6e-26
Identities = 55/273 (20%), Positives = 96/273 (35%), Gaps = 34/273 (12%)
Query: 478 DFSNIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV 536
D+ ++G GT G V ++G A+ ++ +K+ + + L
Sbjct: 8 DYLKLLGK---GTFGKVILVREKATGRYYAMKI--LRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
H L + + V EY+ G LF HL + L
Sbjct: 63 RHPFLTALKYAFQTHDRL--CFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSAL 118
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------NNTTAAKTGS---AAMEL 647
E++H + +R+++ ++ L +D KI+DF T G+ A E+
Sbjct: 119 EYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 648 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
LE + + + G +++EM+ GR+ + N E L E + P KS
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
+ + DPKQR AK
Sbjct: 235 L-----------LAGLLKKDPKQRLGGGPSDAK 256
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 1e-25
Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 40/269 (14%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN-- 537
++GS G G+VY G +S + +A+ +DW + ++ ++ L KV+
Sbjct: 11 LLGS---GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE 597
+ L+ + E + F +++ E I E L + + +
Sbjct: 68 FSGVIRLLDWFERPDSF--VLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVR 124
Query: 598 HMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF-------WNNTTAAKTGSAAMELLE 649
H H + HR+++ +I + + K+ DF + E +
Sbjct: 125 HCHNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 650 TSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708
+ V+S G +L++M+ G I + + E ++G+ + V +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRVSSECQHL 234
Query: 709 QENVLEELLVVIKNCVHPDPKQRPSMRGI 737
I+ C+ P RP+ I
Sbjct: 235 -----------IRWCLALRPSDRPTFEEI 252
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 1e-24
Identities = 54/285 (18%), Positives = 101/285 (35%), Gaps = 42/285 (14%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKI 530
E+F ++G+ G G V+ +G A+ + +K E R +
Sbjct: 24 ENFELLKVLGT---GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE-HTRTER 79
Query: 531 DTLSKVNHKNF-VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIA 589
L + F V L + + ++ +Y G LF HL + E
Sbjct: 80 QVLEHIRQSPFLVTLHYAFQTETKLHLIL--DYINGGELFTHLS--QRERFTEHEVQIYV 135
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTG-------- 641
+ LEH+H+L I +R+++ +I L + ++DF A +T
Sbjct: 136 GEIVLALEHLHKL--GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 193
Query: 642 ----SAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQ 695
+ + S D + +S G +++E++TG ++++ S + LK E
Sbjct: 194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 253
Query: 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740
P + K I+ + DPK+R A
Sbjct: 254 PYPQEMSALAKDL-----------IQRLLMKDPKKRLGCGPRDAD 287
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 3e-24
Identities = 52/297 (17%), Positives = 100/297 (33%), Gaps = 50/297 (16%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
IG GT G V+K +G ++A+ +++ + ++I L + H+
Sbjct: 16 AKIGQ---GTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKHE 69
Query: 540 NFVNLIGYCEEDEPFTRM------MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
N VNLI C +VF++ + ++ L R+ +
Sbjct: 70 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLL 127
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSA 643
L ++H+ I HR+++++++ +T D K++DF N + +
Sbjct: 128 NGLYYIHR--NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185
Query: 644 AM----ELLETSAVDLESNVYSFGTILFEMITGR-----------------ISYSIENGS 682
LL +++ G I+ EM T + SI
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245
Query: 683 LENWASEYLKGEQPLKDIVDPTLKSFQENVL--EELLVVIKNCVHPDPKQRPSMRGI 737
N + L + L +K + + L +I + DP QR
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 96.0 bits (238), Expect = 5e-22
Identities = 44/277 (15%), Positives = 95/277 (34%), Gaps = 34/277 (12%)
Query: 477 EDFSNI--IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+ F I +G+ G+ G V SG A+ + + + L
Sbjct: 41 DQFDRIKTLGT---GSFGRVMLVKHKESGNHYAMKI--LDKQKVVKLKQIEHTLNEKRIL 95
Query: 534 SKVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMA 593
VN V L + MV EY G +F HL A +
Sbjct: 96 QAVNFPFLVKLEFSF--KDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIV 151
Query: 594 YCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW------NNTTAAKTGSAAMEL 647
E++H L + +R+L+ ++ + + +++DF F T + A E+
Sbjct: 152 LTFEYLHSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEI 209
Query: 648 LETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707
+ + + + ++ G +++EM G + + + + +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-------------PIQIYEKIVSGKVR 256
Query: 708 FQENVLEELLVVIKNCVHPDPKQR-PSMRGIAAKLKE 743
F + +L +++N + D +R +++ +K
Sbjct: 257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.3 bits (228), Expect = 4e-21
Identities = 45/285 (15%), Positives = 87/285 (30%), Gaps = 40/285 (14%)
Query: 481 NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK 539
IG GT GTV+K + +A+ D + + S ++I L ++ HK
Sbjct: 8 EKIGE---GTYGTVFKAKNRETHEIVAL---KRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 540 NFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM 599
N V L D +VFE+ + + L
Sbjct: 62 NIVRLHDVLHSD--KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS--FLFQLLKGLGFC 117
Query: 600 HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF----------WNNTTAAKTGSAAMELLE 649
H + HR+L+ ++ + + K+++F ++ L
Sbjct: 118 HS--RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 650 TSAVDLESNVYSFGTILFEMITG---------------RISYSIENGSLENWAS--EYLK 692
+++S G I E+ RI + + E W S +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 693 GEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737
+ +L + + +++N + +P QR S
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 89.9 bits (222), Expect = 4e-20
Identities = 44/298 (14%), Positives = 99/298 (33%), Gaps = 57/298 (19%)
Query: 477 EDFS--NIIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL 533
+D+ +G G V++ +++ ++ V K + + +++I L
Sbjct: 35 DDYQLVRKLGR---GKYSEVFEAINITNNEKVVV-----KI---LKPVKKKKIKREIKIL 83
Query: 534 SKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGM 592
+ N + L ++ T +VFE+ N + L +
Sbjct: 84 ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEI 138
Query: 593 AYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSF---------WNNTTAAKTGS 642
L++ H + I HR+++ ++ + E ++ D+ +N A++
Sbjct: 139 LKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 196
Query: 643 AAMELLETSAVDLESNVYSFGTILFEMITGR---------------ISYSIENGSLENWA 687
L++ D +++S G +L MI + I+ + L ++
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 256
Query: 688 SEY----------LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
+Y + G K Q V E L + + D + R + R
Sbjct: 257 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.9 bits (214), Expect = 5e-19
Identities = 51/303 (16%), Positives = 103/303 (33%), Gaps = 40/303 (13%)
Query: 465 PKLKRSELEAACEDFSN---IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSK 520
P R EL + + G G+V +G+ +AV SR S
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV---KKLSRPFQSI 58
Query: 521 NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FTRMMVFEYSPNGSLFEHLHIQEA 577
+ +++ L + H+N + L+ F + + + +I +
Sbjct: 59 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKC 115
Query: 578 EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----W 632
+ L + + L+++H I HR+L+ S++ + ED KI DF
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 633 NNTTAAKT--GSAAMELLETSAVDLESNVYSFGTILFEMITGR----------------- 673
T T A +L + +++S G I+ E++TGR
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
Query: 674 ISYSIENGSLENWASEYLKG-EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRP 732
+ + L+ +SE + Q L + + + +++ + D +R
Sbjct: 234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 293
Query: 733 SMR 735
+
Sbjct: 294 TAA 296
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.3 bits (202), Expect = 2e-17
Identities = 49/296 (16%), Positives = 95/296 (32%), Gaps = 55/296 (18%)
Query: 482 IIGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN 540
IGS G G V +A+ SR ++ + +++ + VNHKN
Sbjct: 24 PIGS---GAQGIVCAAYDAVLDRNVAI---KKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 541 FVNLIGYCEEDEPF----TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCL 596
++L+ + +V E LD + M +
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGI 132
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF-----WNNTTAAKTGS---AAMELL 648
+H+H I HR+L+ S+I + D KI DF + + A E++
Sbjct: 133 KHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 649 ETSAVDLESNVYSFGTILFEMITGRISYSIEN--------------------GSLENWAS 688
+++S G I+ EM+ +I + + L+
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 689 EYLKG---------EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735
Y++ + D + P + + ++ + DP +R S+
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.6 bits (174), Expect = 8e-14
Identities = 41/313 (13%), Positives = 90/313 (28%), Gaps = 70/313 (22%)
Query: 483 IGSFSDGTVGTVYKGT-LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF 541
+G G TV+ + + +A+ K K +I L +VN +
Sbjct: 21 LGW---GHFSTVWLAKDMVNNTHVAM-----K-IVRGDKVYTEAAEDEIKLLQRVNDADN 71
Query: 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLF------------EHLHIQEAEHLDWAMRLRIA 589
PNG + E + +I+
Sbjct: 72 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 131
Query: 590 MGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNTTAAKTGS------ 642
+ L++MH+ I H +++ ++ + D + + A
Sbjct: 132 KQLLLGLDYMHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSI 190
Query: 643 -----AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK----- 692
+ E+L + ++++S ++FE+ITG + + G +++
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 250
Query: 693 -GEQPLKDI-----------------------------VDPTLKSFQENVLEELLVVIKN 722
GE P + V F ++ +E+ +
Sbjct: 251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSP 310
Query: 723 CVHPDPKQRPSMR 735
+ DP++R
Sbjct: 311 MLQLDPRKRADAG 323
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 65.2 bits (158), Expect = 1e-12
Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 18/155 (11%)
Query: 481 NIIGSFSDGTVGTVYKGTLSSGVEIAV-----TSTSVKSRADWSKNLESQFRKKIDTLSK 535
++G G V+ E V TS K + + F ++
Sbjct: 6 KLMGE---GKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62
Query: 536 VNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYC 595
+ L G V+ + N L E + +E + + +
Sbjct: 63 NEFRALQKLQGLAV-------PKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEE 115
Query: 596 LEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630
+ + I H +L ++ ++ + I DF
Sbjct: 116 VAKFYH--RGIVHGDLSQYNVLVS-EEGIWIIDFP 147
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.5 bits (150), Expect = 4e-11
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 200 LRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGI 257
LRNN +GT+P+ + +LK L L++ FNN G P GN NN+ L G
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGS 307
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 54.0 bits (128), Expect = 3e-08
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Query: 120 CLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSD----GKVVILN 175
C + ALL+ ++ + +P LS W + +W GV C +V L+
Sbjct: 3 CNPQDKQALLQIKKDL-GNP-TTLSSWLP----TTDCCNRTWLGVLCDTDTQTYRVNNLD 56
Query: 176 LRDLCLGGM--LAPELGQLSELKSIILRNN-SFFGTIPKEIGELKELEILDLGFNNFSGP 232
L L L + L L L + + + G IP I +L +L L + N SG
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 278
P +L TL N G + P + L + I D + ++
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 47.4 bits (111), Expect = 4e-06
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 175 NLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF--SGP 232
+LR+ + G L L QL L S+ + N+ G IP + G L+ ++ N P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
Query: 233 FPS 235
P+
Sbjct: 309 LPA 311
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 38.2 bits (87), Expect = 0.003
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 223 DLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK 265
DL N G P L +L + N G I P+ L+
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQGGNLQ 291
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 57.3 bits (137), Expect = 3e-09
Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 8/154 (5%)
Query: 100 NMAALTLVMLLFLQNLSLARCLNSEGMALLRFRERVVRDPFG--ALSKWSDNDGVGDNVN 157
+A+LT + L L N ++ G+ L + L+ + + N N
Sbjct: 236 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295
Query: 158 PCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELK 217
+ + L L + + + L++L+ + NN + + L
Sbjct: 296 QLEDISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFANNKV--SDVSSLANLT 351
Query: 218 ELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
+ L G N S P N +T L L++
Sbjct: 352 NINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 46.9 bits (110), Expect = 5e-06
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 191 QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250
L L + L N+ P + L +L+ L N S S N ++ L +
Sbjct: 305 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGH 360
Query: 251 NQYLGGISP 259
NQ + ++P
Sbjct: 361 NQ-ISDLTP 368
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.0 bits (110), Expect = 4e-06
Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 159 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 218
C V+CSD L L + P+ + + L+NN + LK
Sbjct: 10 CHLRVVQCSD-----LGLEKV-------PK-DLPPDTALLDLQNNKITEIKDGDFKNLKN 56
Query: 219 LEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELH 262
L L L N S P F L L L NQ L + ++
Sbjct: 57 LHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPEKMP 99
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.5 bits (88), Expect = 0.002
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 208 TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVI 267
+PK++ + +LDL N + DF N +L TL+L NN+ L +
Sbjct: 24 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 268 SEIQVDESWLTN 279
+ + ++ L
Sbjct: 82 ERLYLSKNQLKE 93
|
| >d1z9ha1 a.45.1.1 (A:213-373) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]} Length = 161 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: GST C-terminal domain-like superfamily: GST C-terminal domain-like family: Glutathione S-transferase (GST), C-terminal domain domain: Microsomal prostaglandin E synthase-2 species: Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]
Score = 40.6 bits (95), Expect = 2e-04
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 597 EHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAAM 645
+ + L P +R + + DY + F A G+AAM
Sbjct: 28 DWLVHLISPNVYRTPTEA--LASFDYIVREGKFGAVEGAVAKYMGAAAM 74
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Query: 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247
E+ +++ + + +P ++ K+ IL L N + LT L
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 248 LDNNQY 253
LD +
Sbjct: 62 LDRAEL 67
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.004
Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 202 NNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251
NN+ + L+ L+ L L N+ P F S L L N
Sbjct: 157 NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.3 bits (95), Expect = 3e-04
Identities = 23/195 (11%), Positives = 44/195 (22%), Gaps = 10/195 (5%)
Query: 74 KLHIICYQYCYHLGMNQPCRFHRLRLNMAALTLVMLLFLQNLSLARCLNSEGMALLRFRE 133
L + N L L L L+ N+ L
Sbjct: 165 TAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPP 224
Query: 134 RVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLS 193
+ + + ++ +
Sbjct: 225 SLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPP 284
Query: 194 ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ- 252
L+ + + NN +P L+ L FN+ + P N L L ++ N
Sbjct: 285 SLEELNVSNNKL-IELPALPPRLERL---IASFNHLAE-VPELPQN---LKQLHVEYNPL 336
Query: 253 -YLGGISPELHVLKV 266
I + L++
Sbjct: 337 REFPDIPESVEDLRM 351
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (90), Expect = 0.001
Identities = 15/95 (15%), Positives = 26/95 (27%), Gaps = 15/95 (15%)
Query: 174 LNLRDLCLGGM------LAPELGQLSELKSIILRNNSF----FGTIPKEIGELKELEILD 223
L+++ L + A L L + + + L + I + L L+
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 224 LGFNNFSGPFPSDFG-----NSFSLTTLLLDNNQY 253
L N S + L L N
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (88), Expect = 0.003
Identities = 18/132 (13%), Positives = 34/132 (25%), Gaps = 12/132 (9%)
Query: 146 WSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQL---SELKSIILRN 202
+ S + + ++ L G+ G S L+ + L +
Sbjct: 319 VKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 378
Query: 203 NSFFGTIPKEIGE----LKELEILDLGFNNFSGPFPSDFGNSF-----SLTTLLLDNNQY 253
+ + L LDL N S L L+L + +
Sbjct: 379 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 438
Query: 254 LGGISPELHVLK 265
+ L L+
Sbjct: 439 SEEMEDRLQALE 450
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 772 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.91 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.85 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.42 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.31 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.21 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.15 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.04 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 98.98 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 98.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 98.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 98.85 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 98.84 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 98.81 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 98.71 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 98.69 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 98.67 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.53 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.48 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 98.45 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.44 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.42 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.41 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 98.41 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.3 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.27 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.27 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.2 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.1 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.07 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.89 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 97.87 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.87 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.53 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.5 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.49 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.46 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.45 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 97.39 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.27 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.25 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.2 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.09 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.75 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 95.9 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.52 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 94.91 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.82 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 94.36 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 91.05 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-49 Score=418.50 Aligned_cols=259 Identities=19% Similarity=0.317 Sum_probs=204.8
Q ss_pred CCHHHHHHHhhccc--------ccccccCccceEEEEEEEEcC-C---cEEEEEEeeecccchhhhhHHHHHHHHHHHHh
Q 004124 467 LKRSELEAACEDFS--------NIIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534 (772)
Q Consensus 467 ~~~~el~~~~~~f~--------~iig~lg~G~fG~Vykg~~~~-~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~ 534 (772)
++++|+.+++.+|. ++.+.+|+|+||+||+|+++. + ..||||++.... .....++|.+|+++|+
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~ 82 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMG 82 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC----CHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc----CHHHHHHHHHHHHHHH
Confidence 45567777777774 345678999999999999753 2 247777765332 2334568999999999
Q ss_pred cCCCCcccceeEEEEcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004124 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 535 ~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
+++|||||+++|+|..++ ..++|||||++|+|.+++.. ....++|..++.|+.|||+||+|||+++ |+||||||+
T Consensus 83 ~l~HpnIv~l~g~~~~~~--~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHrDlKp~ 157 (299)
T d1jpaa_ 83 QFDHPNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN--YVHRDLAAR 157 (299)
T ss_dssp TCCCTTBCCEEEEECSSS--SCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGG
T ss_pred hCCCCCCccEEEEEeeCC--EEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC--CccCccccc
Confidence 999999999999998877 56999999999999998863 3456999999999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCC--------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCC
Q 004124 615 SIYLTEDYAAKISDFSFWNNTT--------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIE 679 (772)
Q Consensus 615 NILld~~~~~kLsDFGla~~~~--------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~ 679 (772)
||||+.++++||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 158 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~ 237 (299)
T d1jpaa_ 158 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237 (299)
T ss_dssp GEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC
Confidence 9999999999999999986432 12446999999999999999999999999999998 89999533
Q ss_pred CCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 680 NGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...+....+..+... ..+.++++++.+||.+||+.||++||||.||++.|+++.+
T Consensus 238 --~~~~~~~~i~~~~~~----------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 238 --TNQDVINAIEQDYRL----------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp --CHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHcCCCC----------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 334444444333211 1223455778999999999999999999999999998765
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-49 Score=409.72 Aligned_cols=244 Identities=20% Similarity=0.321 Sum_probs=199.8
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|++.++..||||++..... ..++|.+|++++++++|||||+++|+|..++ ..++||
T Consensus 8 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--~~~lv~ 79 (263)
T d1sm2a_ 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVF 79 (263)
T ss_dssp EEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC------cHHHHHHHHHHHHhcCCCCcccccceeccCC--ceEEEE
Confidence 67788999999999999999888999999864332 1357999999999999999999999998877 569999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.. ....++|..++.|+.|||.||+|||+.+ |+||||||+|||+|+++.+||+|||+++...
T Consensus 80 E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~--iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~ 156 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156 (263)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred EecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc--eeecccchhheeecCCCCeEecccchheeccCCCc
Confidence 99999999999863 3456899999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..|+.++|||||||++|||+|+..|+. ...+..+....+..+.... .+.
T Consensus 157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~-~~~~~~~~~~~i~~~~~~~----------~p~ 225 (263)
T d1sm2a_ 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLY----------KPR 225 (263)
T ss_dssp --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT-CSCCHHHHHHHHHHTCCCC----------CCT
T ss_pred eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCC-CCCCHHHHHHHHHhcCCCC----------Ccc
Confidence 23457999999999999999999999999999999654443 2334445555444442211 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+++++.++|.+||+.||++||||+||++.|+++.+
T Consensus 226 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 334678999999999999999999999999999865
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-49 Score=412.15 Aligned_cols=250 Identities=26% Similarity=0.452 Sum_probs=201.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+++. .||||++...... ....+.|.+|+++|++++|||||+++|++.++ ..++||
T Consensus 11 ~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~---~~~lv~ 82 (276)
T d1uwha_ 11 TVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVT 82 (276)
T ss_dssp CCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCC---TTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc---EEEEEE
Confidence 567889999999999998653 5999998654322 33457899999999999999999999998654 368999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
|||++|+|.++++. ....++|..++.|+.|||+||+|||+.+ ||||||||+|||++.++.+||+|||+++...
T Consensus 83 Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~--ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~ 159 (276)
T d1uwha_ 83 QWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159 (276)
T ss_dssp ECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred ecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC--EeccccCHHHEEEcCCCCEEEccccceeeccccCC
Confidence 99999999999963 3356999999999999999999999988 9999999999999999999999999986432
Q ss_pred -------CCCccccchhhhcc---CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 -------AAKTGSAAMELLET---SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~---~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|+|||.+.+ ..|+.++|||||||++|||+||+.||..... ..........+. ..+...
T Consensus 160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~-~~~~~~~~~~~~------~~p~~~ 232 (276)
T d1uwha_ 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIFMVGRGY------LSPDLS 232 (276)
T ss_dssp ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTS------CCCCGG
T ss_pred cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcCC------CCCcch
Confidence 34567999999853 4589999999999999999999999964322 222222222221 122233
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.....+++++.+||.+||+.||++||||+||++.|+.+.+..
T Consensus 233 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~ 274 (276)
T d1uwha_ 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274 (276)
T ss_dssp GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence 334456678999999999999999999999999999987643
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-48 Score=409.53 Aligned_cols=243 Identities=21% Similarity=0.335 Sum_probs=202.0
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+++++..||||++..... ..++|.+|+++|++++|||||+++|++.++ ..++||
T Consensus 16 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---~~~iv~ 86 (272)
T d1qpca_ 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIIT 86 (272)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC------CHHHHHHHHHHHHhCCCCCEeEEEeeeccC---CeEEEE
Confidence 67788999999999999999888999998864322 235799999999999999999999988654 358999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.......++|..+++|+.||++||+|||+++ |+||||||+||||++++.+||+|||+++...
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~--ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~ 164 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccchhheeeecccceeeccccceEEccCCcc
Confidence 9999999999887655567999999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||+||..|+.. .....+.......+..+. .+.
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~-~~~~~~~~~~i~~~~~~~----------~p~ 233 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-GMTNPEVIQNLERGYRMV----------RPD 233 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTCCCC----------CCT
T ss_pred ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCC-CCCHHHHHHHHHhcCCCC----------Ccc
Confidence 234579999999999999999999999999999997666542 233444444443332211 123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.+++++.+|+.+||+.||++||||+||++.|+++-
T Consensus 234 ~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 34567899999999999999999999999998764
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-47 Score=398.01 Aligned_cols=241 Identities=18% Similarity=0.355 Sum_probs=202.8
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+++++..||||+++..... .++|.+|++++++++|||||+++|+|.+++ ..++||
T Consensus 7 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~------~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~--~~~iv~ 78 (258)
T d1k2pa_ 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIIT 78 (258)
T ss_dssp CCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSC------HHHHHHHHHHHHTCCCTTBCCEEEEECCSS--SEEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCC------HHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEE
Confidence 577899999999999999998889999998754322 357999999999999999999999998876 579999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+.+|+.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 79 Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~--iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 155 (258)
T d1k2pa_ 79 EYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155 (258)
T ss_dssp ECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT--BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred EccCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC--cccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence 99999999998753 3456899999999999999999999988 9999999999999999999999999986422
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+....++.|+|||||||++|||+| |+.||... +..+....+..+... ..+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~--~~~~~~~~i~~~~~~----------~~p 223 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRL----------YRP 223 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCC----------CCC
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC--CHHHHHHHHHhCCCC----------CCc
Confidence 23446899999999999999999999999999998 89999533 344444444433211 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
...++++.++|.+||+.||++||||+||++.|.+|
T Consensus 224 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 33446889999999999999999999999998764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1e-47 Score=405.98 Aligned_cols=245 Identities=21% Similarity=0.334 Sum_probs=203.5
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||+|++. +++.||||++..... ..++|.+|+++|++++|||||+++|+|.+++ ..++|
T Consensus 20 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv 91 (287)
T d1opja_ 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 91 (287)
T ss_dssp EEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred EEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc------hHHHHHHHHHHHHhCCCCCEecCCccEeeCC--eeEEE
Confidence 66788999999999999976 578899998764321 2357999999999999999999999998877 56999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~-- 637 (772)
||||++|+|.+++.......++|..++.|+.||+.||+|||+.+ |+||||||+||||++++.+||+|||+++....
T Consensus 92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~--iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169 (287)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC--cccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence 99999999999997666678999999999999999999999988 99999999999999999999999999875432
Q ss_pred --------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+.+..|+.++|||||||++|||+||..|+... .+..+.......+.. ...+
T Consensus 170 ~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~-~~~~~~~~~i~~~~~----------~~~~ 238 (287)
T d1opja_ 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEKDYR----------MERP 238 (287)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT-CCHHHHHHHHHTTCC----------CCCC
T ss_pred ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCc-chHHHHHHHHhcCCC----------CCCC
Confidence 234689999999999999999999999999999987776432 233333332222211 1122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+++++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 239 ~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 3445788999999999999999999999999988754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-47 Score=395.67 Aligned_cols=238 Identities=20% Similarity=0.356 Sum_probs=201.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.+ +++.||+|++......+ ....+.+.+|++++++++|||||++++++.+++ ..++|
T Consensus 9 ~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~iv 84 (263)
T d2j4za1 9 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLI 84 (263)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC--hHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC--EEEEE
Confidence 67889999999999999975 68899999886543222 223567999999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
||||++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++...
T Consensus 85 mEy~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~--ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~ 160 (263)
T d2j4za1 85 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 160 (263)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC
T ss_pred EeecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeeeeccccceecCCCCEeecccceeeecCCCc
Confidence 999999999999863 356999999999999999999999998 9999999999999999999999999986543
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
.++..|+|||.+.+..|+.++|||||||++|||+||+.||.. .+..+............ ++..
T Consensus 161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~-----------p~~~ 227 (263)
T d2j4za1 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTF-----------PDFV 227 (263)
T ss_dssp CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTTCCCC-----------CTTS
T ss_pred ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC--CCHHHHHHHHHcCCCCC-----------CccC
Confidence 245689999999999999999999999999999999999953 34444445444433221 2234
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
++++.+++.+||+.||++|||++|+++
T Consensus 228 s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 228 TEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 567889999999999999999999986
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-47 Score=402.01 Aligned_cols=240 Identities=18% Similarity=0.301 Sum_probs=197.8
Q ss_pred ccCccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+||+|+||+||+|+++ ++..||||++.... .....++|.+|+++|++++|||||+++|+|.++ ..++|||
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~----~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~~lvmE 88 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 88 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhc----CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC---eEEEEEE
Confidence 4899999999999864 34579999886432 233457899999999999999999999999754 3689999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
||++|+|.+++.. ....+++..++.|+.|||.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~--iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 89 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp CCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred eCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 9999999998753 3457999999999999999999999988 9999999999999999999999999986332
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+....+..+..+ ..
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~--~~~~~~~i~~~~~~----------~~ 233 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRM----------EC 233 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCCC----------CC
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCC----------CC
Confidence 23457999999999999999999999999999998 999996432 33444444333221 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
++.+++++.+||.+||+.||++||||.+|++.|+.+..
T Consensus 234 p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 234 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 33455788999999999999999999999999987543
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-47 Score=399.81 Aligned_cols=244 Identities=18% Similarity=0.271 Sum_probs=193.7
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +|+.||||.+...... +...+.|.+|+++|++++|||||++++++.+......++|
T Consensus 7 ~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 7 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC---HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC---HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 78899999999999999964 6889999998765432 3345679999999999999999999999976443357999
Q ss_pred EeccCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCC---CCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLT---PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~---~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
||||++|+|.+++... ....+++..+..|+.|++.||+|||+.+ .+||||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998643 3567999999999999999999999854 3599999999999999999999999998753
Q ss_pred C---------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 635 T---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~---------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ..++..|+|||.+.+..|+.++|||||||++|||+||+.||... +..+....+..+..+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~--~~~~~~~~i~~~~~~--------- 232 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR--------- 232 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCC---------
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC--CHHHHHHHHHcCCCC---------
Confidence 2 23566899999999999999999999999999999999999643 344444444443211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+..+++++.+|+.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 233 -RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 122334567899999999999999999999975
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-47 Score=401.05 Aligned_cols=243 Identities=22% Similarity=0.272 Sum_probs=201.6
Q ss_pred hcccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++++++.+|+|+||+||+|+.. +++.||||++...... ..+.|.+|+++|++++|||||++++++.+.+ .
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~ 83 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-----ELEDYMVEIDILASCDHPNIVKLLDAFYYEN--N 83 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSG-----GGGGTHHHHHHHHHCCCTTBCCEEEEEEETT--E
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHH-----HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--e
Confidence 356789999999999999999964 6889999998754322 2356889999999999999999999999877 6
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC-
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN- 634 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~- 634 (772)
.++|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 84 ~~lvmEy~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~--ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~ 160 (288)
T d2jfla1 84 LWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKN 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEEeecChhheeECCCCCEEEEechhhhcc
Confidence 7999999999999998753 3456999999999999999999999998 99999999999999999999999999753
Q ss_pred --------CCCCCccccchhhh-----ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004124 635 --------TTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 635 --------~~~~~~~~~aPE~~-----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
...++..|+|||.+ ....|+.++|||||||++|||+||+.||...+ ..+.......+..+..
T Consensus 161 ~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~--~~~~~~~i~~~~~~~~--- 235 (288)
T d2jfla1 161 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTL--- 235 (288)
T ss_dssp HHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC--GGGHHHHHHHSCCCCC---
T ss_pred CCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHcCCCCCC---
Confidence 34467789999997 35568999999999999999999999996433 3333444444432211
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+...++++.+|+.+||+.||++|||+.|+++
T Consensus 236 -----~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 236 -----AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp -----SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112345578899999999999999999999875
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-47 Score=398.94 Aligned_cols=238 Identities=21% Similarity=0.341 Sum_probs=195.0
Q ss_pred ccCccceEEEEEEEEcC---CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEEe
Q 004124 485 SFSDGTVGTVYKGTLSS---GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fG~Vykg~~~~---~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+||+|+||+||+|.++. ++.||||++..... .....++|.+|+++|++++|||||+++|+|..+ ..+||||
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~~~lvmE 87 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 87 (277)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC---CHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---CEEEEEE
Confidence 58999999999998653 45799998864322 233457899999999999999999999999754 3589999
Q ss_pred ccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-----
Q 004124 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT----- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~----- 636 (772)
||++|+|.++++ ....++|..++.|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++...
T Consensus 88 ~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~--iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~ 163 (277)
T d1xbba_ 88 MAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163 (277)
T ss_dssp CCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred cCCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCC--cccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence 999999999985 3456999999999999999999999988 9999999999999999999999999986322
Q ss_pred -------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 -------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+....++.++|||||||++|||+| |+.||... +..+....+..+..+ ..
T Consensus 164 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~----------~~ 231 (277)
T d1xbba_ 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM----------GC 231 (277)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CC
T ss_pred cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC--CHHHHHHHHHcCCCC----------CC
Confidence 23457999999999999999999999999999998 89999633 333433333333211 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+..+++++.+||.+||+.||++||||+||.+.|+..
T Consensus 232 p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 234557889999999999999999999999988764
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-47 Score=398.53 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=204.1
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+++++..||||++..... ..+.|.+|+.+|++++|||||+++|+|.++ ..++||
T Consensus 20 ~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~lv~ 90 (285)
T d1fmka3 20 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVT 90 (285)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC------CHHHHHHHHHHHHhcccCCEeEEEEEEecC---CeEEEE
Confidence 77889999999999999999888999999864322 135799999999999999999999998654 358999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.+++.......++|.+++.|+.||++||+|||+.+ |+||||||+|||||+++++||+|||+++...
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~--ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~ 168 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 168 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh--eecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence 9999999999987666677999999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+....++.++|||||||++|||+||..|+... ....+....+..+... +.+.
T Consensus 169 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~-~~~~~~~~~i~~~~~~----------~~~~ 237 (285)
T d1fmka3 169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-MVNREVLDQVERGYRM----------PCPP 237 (285)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-CCHHHHHHHHHTTCCC----------CCCT
T ss_pred eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCC-CCHHHHHHHHHhcCCC----------CCCc
Confidence 2345799999999999999999999999999999977776433 3344444444333211 1223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.+++++.++|.+||+.||++||+|++|++.|++.....
T Consensus 238 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 44568899999999999999999999999999866543
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-46 Score=392.72 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=197.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC--CCceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
+++..++|+|+||+||+|+.. +++.||+|++...... ....+.|.+|+++|++++|||||++++++.+. +....
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~ 87 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 87 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEE
Confidence 355567899999999999975 6789999988754322 33456799999999999999999999998652 22357
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kLsDFGla~~~ 635 (772)
++||||+++|+|.+++.. ...+++..+..++.||++||+|||+.+++|+||||||+|||++ +++.+||+|||+++..
T Consensus 88 ~ivmE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~ 165 (270)
T d1t4ha_ 88 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 165 (270)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence 999999999999999863 3568999999999999999999999888899999999999996 5799999999998643
Q ss_pred C-------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 636 T-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ~-------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. .++..|+|||.+.+ .|+.++|||||||++|||+||+.||... .+..+....+..+..+. .+
T Consensus 166 ~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~-~~~~~~~~~i~~~~~~~---------~~ 234 (270)
T d1t4ha_ 166 RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SF 234 (270)
T ss_dssp CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GG
T ss_pred cCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCc-ccHHHHHHHHHcCCCCc---------cc
Confidence 2 35678999999865 6999999999999999999999999633 23444444443332211 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...++++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 2234467889999999999999999999975
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-47 Score=394.66 Aligned_cols=239 Identities=19% Similarity=0.318 Sum_probs=194.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||||++...... ...++|.+|+++|++++|||||++++++.+++ ..++|
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~--~~~iv 81 (271)
T d1nvra_ 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 81 (271)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc----hHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc--eeEEE
Confidence 77889999999999999974 6889999998754322 22357899999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+++|+|.+++. ....+++..+..|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 82 mEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~--IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~ 157 (271)
T d1nvra_ 82 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 157 (271)
T ss_dssp EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EeccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC--CccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence 99999999999985 3456999999999999999999999998 999999999999999999999999998632
Q ss_pred -------CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 -------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..+ +.++||||+||++|||+||+.||.........+.. .... .... .
T Consensus 158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~-~~~~-~~~~--------~ 227 (271)
T d1nvra_ 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEK-KTYL--------N 227 (271)
T ss_dssp EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH-HHTT-CTTS--------T
T ss_pred ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH-HhcC-CCCC--------C
Confidence 235678999999988776 57899999999999999999999754443333222 1111 1110 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....++++.+|+.+||+.||++|||++|+++
T Consensus 228 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 228 PWKKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11234567889999999999999999999865
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-46 Score=395.31 Aligned_cols=238 Identities=21% Similarity=0.289 Sum_probs=198.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++ ..++
T Consensus 22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~i 94 (293)
T d1yhwa1 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWV 94 (293)
T ss_dssp BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh-----HHHHHHHHHHHHHhCCCCCEeeEeEEEEECC--EEEE
Confidence 47889999999999999995 56899999998754322 2357999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+|||++.++++||+|||+++..
T Consensus 95 vmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~--iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~ 169 (293)
T d1yhwa1 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (293)
T ss_dssp EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence 9999999999988743 46899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||... +..+..........+. . ..+
T Consensus 170 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~--~~~~~~~~~~~~~~~~--~------~~~ 239 (293)
T d1yhwa1 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--NPLRALYLIATNGTPE--L------QNP 239 (293)
T ss_dssp TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHHCSCC--C------SSG
T ss_pred cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCCCC--C------CCc
Confidence 22566799999999999999999999999999999999999643 2333333333322111 0 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+..++++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp GGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 345578899999999999999999999875
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-46 Score=394.40 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=197.9
Q ss_pred ccccccCccceEEEEEEEEcCC-----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG-----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~-----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||+||+|+++.. ..||||++.... ......+|.+|+++|++++|||||+++|++.+.+ .
T Consensus 10 ~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~--~ 83 (283)
T d1mqba_ 10 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--P 83 (283)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--S
T ss_pred EeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc----ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC--c
Confidence 3455678899999999997643 368999875432 2334567999999999999999999999998877 5
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++|||||.+|++.+++.. ....++|..++.|+.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 84 ~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~--iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc--cccCccccceEEECCCCeEEEcccchhhcc
Confidence 7999999999999988753 4467999999999999999999999988 999999999999999999999999998643
Q ss_pred C------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 T------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||..|+... ....+....+..+..+
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~-~~~~~~~~~i~~~~~~------- 232 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE-LSNHEVMKAINDGFRL------- 232 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHHHTTCCC-------
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCcccc-CCHHHHHHHHhccCCC-------
Confidence 2 1345699999999999999999999999999999977666432 3344444443333211
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+||.+||+.||++||||.||++.|+++.+.
T Consensus 233 ---~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 233 ---PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp ---CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 12233557789999999999999999999999999988663
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=392.27 Aligned_cols=243 Identities=25% Similarity=0.424 Sum_probs=197.7
Q ss_pred ccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|+++ |..||||+++... ..++|.+|++++++++|||||+++|+|.+.+. ..++||
T Consensus 10 ~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~-------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~ 80 (262)
T d1byga_ 10 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 80 (262)
T ss_dssp EEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred EEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC-cEEEEE
Confidence 56788999999999999985 7789999985422 23579999999999999999999999975432 359999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+++|+|.++++.+....++|..+++|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~ 158 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 158 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc--eeccccchHhheecCCCCEeecccccceecCCCCc
Confidence 9999999999997655556899999999999999999999987 9999999999999999999999999987532
Q ss_pred --CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 637 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+....+..+..+ +.+...+
T Consensus 159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i~~~~~~----------~~~~~~~ 226 (262)
T d1byga_ 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKM----------DAPDGCP 226 (262)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTCCC----------CCCTTCC
T ss_pred cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCC----------CCCccCC
Confidence 23457899999999999999999999999999999 67777533 333333333332111 1233445
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+++.+|+.+||+.||++||||.||+++|++++.
T Consensus 227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence 688999999999999999999999999999865
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-46 Score=402.60 Aligned_cols=243 Identities=21% Similarity=0.339 Sum_probs=194.6
Q ss_pred ccccccCccceEEEEEEEEcCC------cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSSG------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~~------~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|++... ..||||++..... ......|.+|+.+|.++ +|||||+++|++.+.+
T Consensus 40 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~- 114 (325)
T d1rjba_ 40 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 114 (325)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred EEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC----HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC-
Confidence 6778899999999999986532 2588887754322 22346799999999998 8999999999999877
Q ss_pred ceEEEEEeccCCCChhhhhhhhc---------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE---------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~---------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++|||||++|+|.++++.+. ...++|..++.|+.||++||+|||+++ |||||||
T Consensus 115 -~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~--IiHRDlK 191 (325)
T d1rjba_ 115 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLA 191 (325)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCS
T ss_pred -eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCc
Confidence 5699999999999999996432 135899999999999999999999988 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCC
Q 004124 613 SSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||++.++.+||+|||+++.... ++..|+|||.+.+..|+.++|||||||++|||+| |+.||....
T Consensus 192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999864321 2457999999999999999999999999999998 899996443
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 004124 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLK 742 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~ 742 (772)
.. +.+...+...... +.+..+++++.+||.+||+.||++||||+||++.|.
T Consensus 272 ~~--~~~~~~~~~~~~~---------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 272 VD--ANFYKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CS--HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH--HHHHHHHhcCCCC---------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 32 2222333322111 122345578999999999999999999999999985
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.7e-46 Score=397.79 Aligned_cols=241 Identities=17% Similarity=0.207 Sum_probs=198.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+++|++++|||||++++++.+++ ..++
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~i 92 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWL 92 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC--HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC--EEEE
Confidence 47788999999999999996 468889999987544322 334567999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
|||||++|+|..++. ....+++..+..|+.||+.||+|||+++ ||||||||+|||+++++++||+|||+++...
T Consensus 93 v~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~--iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~ 168 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (309)
T ss_dssp EEECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEEecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEECCCCCEEEeecccccccCCC
Confidence 999999999976653 3467999999999999999999999998 9999999999999999999999999987433
Q ss_pred ---CCCccccchhhhc---cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ---AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ---~~~~~~~aPE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||++. ...|+.++|||||||++|||+||+.||... +..+.......+..+. .. ..
T Consensus 169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~--~~~~~~~~i~~~~~~~--~~-------~~ 237 (309)
T d1u5ra_ 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNESPA--LQ-------SG 237 (309)
T ss_dssp CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--CS-------CT
T ss_pred CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCC--CC-------CC
Confidence 4667899999985 356899999999999999999999999633 3334344444433221 11 12
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++++.+|+.+||+.||++|||+.|+++
T Consensus 238 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 33567899999999999999999999975
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.6e-46 Score=398.27 Aligned_cols=249 Identities=22% Similarity=0.354 Sum_probs=204.1
Q ss_pred hcccccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEc
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
++| ++++.+|+|+||+||+|+++ ++..||||++.... .....++|.+|+++|++++||||++++++|..
T Consensus 13 ~~~-~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 13 NNI-EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp GGC-EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred HHc-EEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc----ChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 444 78899999999999999974 34689999886433 23345789999999999999999999999988
Q ss_pred CCCceEEEEEeccCCCChhhhhhhhc----------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004124 551 DEPFTRMMVFEYSPNGSLFEHLHIQE----------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 608 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~----------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvH 608 (772)
.+ ..++||||+++|+|.++++... ...++|..++.|+.|++.||+|||+.+ |||
T Consensus 88 ~~--~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~--ivH 163 (301)
T d1lufa_ 88 GK--PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVH 163 (301)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCC
T ss_pred CC--ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC--eEe
Confidence 76 5699999999999999986321 234899999999999999999999988 999
Q ss_pred eCCCCCCeEECCCCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCC-Ccc
Q 004124 609 RNLQSSSIYLTEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR-ISY 676 (772)
Q Consensus 609 rDLKp~NILld~~~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~-~P~ 676 (772)
|||||+|||+|.++++||+|||+++.. ..++..|+|||.+.+..|+.++|||||||++|||+||. .||
T Consensus 164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~ 243 (301)
T d1lufa_ 164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243 (301)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence 999999999999999999999997521 22345799999999999999999999999999999986 456
Q ss_pred cCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 677 SIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. +.+..+....+..+..+ ..++.++.++.+|+.+||+.||++||||.||++.|++|.+
T Consensus 244 ~--~~~~~e~~~~v~~~~~~----------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 244 Y--GMAHEEVIYYVRDGNIL----------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp T--TSCHHHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred C--CCCHHHHHHHHHcCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 4 23444444444443211 1223445678999999999999999999999999998853
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-46 Score=394.70 Aligned_cols=258 Identities=19% Similarity=0.268 Sum_probs=209.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++....... ....+.+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~i 85 (288)
T d1uu3a_ 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYF 85 (288)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS--EEEE
T ss_pred CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC--HHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC--EEEE
Confidence 378889999999999999974 68899999986533211 223467999999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ...+++..+..++.|++.||+|||+++ ||||||||+|||+++++.+||+|||+++..
T Consensus 86 vmEy~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 86 GLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEEccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhcccc--EEcCcCCccccccCCCceEEecccccceecccC
Confidence 9999999999998853 456999999999999999999999998 999999999999999999999999998632
Q ss_pred --------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||++.+..|+.++||||+||++|||+||+.||... +..+....+..+...
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~--~~~~~~~~i~~~~~~----------- 228 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEYLIFQKIIKLEYD----------- 228 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHTTCCC-----------
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc--CHHHHHHHHHcCCCC-----------
Confidence 23567899999999999999999999999999999999999643 344444454444322
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
++...++++.+|+.+||+.||++|||++|+++.-. +. .+|.+....|+.++
T Consensus 229 ~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~-i~------~Hpff~~i~w~~l~ 279 (288)
T d1uu3a_ 229 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP-LK------AHPFFESVTWENLH 279 (288)
T ss_dssp CCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHH-HH------TSGGGTTCCCTTGG
T ss_pred CCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHH-HH------cCCccCCCCHHHhh
Confidence 12234567889999999999999999999754321 21 13445555666554
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-46 Score=400.45 Aligned_cols=255 Identities=19% Similarity=0.293 Sum_probs=199.0
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +|+.||+|++..... ....+++.+|+++|++++|||||+++++|.+.+ +.++
T Consensus 8 y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~i 81 (322)
T d1s9ja_ 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISI 81 (322)
T ss_dssp EEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC----TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS--EEEE
T ss_pred CEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 377899999999999999964 688999999865432 234568999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN--- 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~--- 634 (772)
|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ ++ |+||||||+|||+++++++||+|||+|+.
T Consensus 82 VmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 82 CMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157 (322)
T ss_dssp EEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC--EEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence 9999999999999964 3569999999999999999999997 47 99999999999999999999999999862
Q ss_pred ----CCCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-hhcCCC------------C
Q 004124 635 ----TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY-LKGEQP------------L 697 (772)
Q Consensus 635 ----~~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~-~~~~~~------------~ 697 (772)
...++..|+|||++.+..|+.++||||+||++|||+||+.||...+.......... ..+... .
T Consensus 158 ~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (322)
T d1s9ja_ 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237 (322)
T ss_dssp HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------
T ss_pred CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc
Confidence 33567889999999999999999999999999999999999975543322111100 000000 0
Q ss_pred c-cccC--Ccc--------------ccc-cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 004124 698 K-DIVD--PTL--------------KSF-QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEI 744 (772)
Q Consensus 698 ~-~~~d--~~l--------------~~~-~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i 744 (772)
. ...+ +.. ... ....+.++.+++.+||+.||++|||++|+++. +++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp --------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred cccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 0 0000 000 000 01134678899999999999999999999873 4443
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-45 Score=389.86 Aligned_cols=243 Identities=19% Similarity=0.297 Sum_probs=191.6
Q ss_pred cccccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 478 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 478 ~f~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+.+++++.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|+++|++++|||||++++++.+++ ..
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~ 82 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE----GKEGSMENEIAVLHKIKHPNIVALDDIYESGG--HL 82 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC--------------CHHHHHHHTCCCTTBCCEEEEEECSS--EE
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EE
Confidence 44588899999999999999975 6889999998754432 22356889999999999999999999999877 78
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCcc
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWN 633 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~ 633 (772)
++|||||++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+. +++.+||+|||+++
T Consensus 83 ~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~ 158 (307)
T d1a06a_ 83 YLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSK 158 (307)
T ss_dssp EEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred EEEEeccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce--eeeEEecccceeecccCCCceEEEeccceeE
Confidence 99999999999999995 3457999999999999999999999998 99999999999994 57899999999986
Q ss_pred CC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. ..++..|+|||.+.+..|+.++|||||||++|||+||+.||... ...+....+..+......
T Consensus 159 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~--~~~~~~~~i~~~~~~~~~------ 230 (307)
T d1a06a_ 159 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE--NDAKLFEQILKAEYEFDS------ 230 (307)
T ss_dssp --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHTTCCCCCT------
T ss_pred EccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCC--CHHHHHHHHhccCCCCCC------
Confidence 43 23567899999999999999999999999999999999999643 334444444444322211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......++++.+|+.+||+.||++|||+.|+++
T Consensus 231 -~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 231 -PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp -TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 112334567899999999999999999999986
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-46 Score=388.43 Aligned_cols=245 Identities=23% Similarity=0.355 Sum_probs=192.8
Q ss_pred ccccccCccceEEEEEEEEcC--C--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--G--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|+|+||+||+|++.. + ..||||++...... .....++|.+|+++|++++|||||+++|+|.++ ..
T Consensus 11 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---~~ 85 (273)
T d1u46a_ 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PM 85 (273)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SC
T ss_pred EEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---ch
Confidence 788899999999999998642 2 36888877543322 233456899999999999999999999999764 35
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|++.+++... ...+++..++.++.|||.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~--iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred heeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCC--EeeeeecHHHhccccccceeeccchhhhhcc
Confidence 8999999999999987643 456999999999999999999999988 9999999999999999999999999987432
Q ss_pred C------------CCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||+| |+.||.. .+..+....+.......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~--~~~~~~~~~i~~~~~~~------ 234 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERL------ 234 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTSCCCC------
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCC--cCHHHHHHHHHhCCCCC------
Confidence 2 2346899999999999999999999999999998 8999953 34444445444432211
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+.+..++.++.+|+.+||+.||++||||.||.+.|++.
T Consensus 235 ---~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 235 ---PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11233456788999999999999999999999988864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-45 Score=386.82 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=203.1
Q ss_pred hcccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 477 EDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 477 ~~f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+++++.+|+|+||+||+|+. .+|+.||||++........ .....+.|.+|+++|++++|||||++++++.+.+
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-- 86 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-- 86 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 35568889999999999999997 4789999999875543221 1223567999999999999999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEcccc
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kLsDFG 630 (772)
..+||||||++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 87 ~~~iv~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~--ivHrDiKp~Nill~~~~~~~~~vkl~DfG 162 (293)
T d1jksa_ 87 DVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFG 162 (293)
T ss_dssp EEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc--eeecccccceEEEecCCCcccceEecchh
Confidence 78999999999999999864 356999999999999999999999998 99999999999998776 59999999
Q ss_pred CccCCC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004124 631 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 631 la~~~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+.........
T Consensus 163 ~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~--~~~~~~~~i~~~~~~~~~--- 237 (293)
T d1jksa_ 163 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFED--- 237 (293)
T ss_dssp TCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHTTCCCCCH---
T ss_pred hhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC--CHHHHHHHHHhcCCCCCc---
Confidence 986432 3456799999999999999999999999999999999999643 334444444443222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.++.+|+.+||+.||++|||++|+++
T Consensus 238 ----~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 238 ----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp ----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----hhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112234567889999999999999999999976
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-44 Score=387.00 Aligned_cols=238 Identities=19% Similarity=0.268 Sum_probs=200.7
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+|+.||||++....... ....+.+.+|+.+|++++|||||++++++.+.+ ..++|
T Consensus 7 ~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv 82 (316)
T d1fota_ 7 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMI 82 (316)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC--HHHHHHHHHHHHHHHhccCcChhheeeeEeeCC--eeeeE
Confidence 7889999999999999997 468999999986543221 223467999999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
||||++|+|..++. ....+++.....++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 83 mE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~--iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~ 158 (316)
T d1fota_ 83 MDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158 (316)
T ss_dssp ECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred eeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCc--EEccccCchheeEcCCCCEEEecCccceEecccc
Confidence 99999999998875 3456788899999999999999999998 999999999999999999999999998643
Q ss_pred --CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004124 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||.. .+..+....+..+..... +..+
T Consensus 159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~--~~~~~~~~~i~~~~~~~p-----------~~~s 225 (316)
T d1fota_ 159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD--SNTMKTYEKILNAELRFP-----------PFFN 225 (316)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHCCCCCC-----------TTSC
T ss_pred ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC--cCHHHHHHHHHcCCCCCC-----------CCCC
Confidence 3466789999999999999999999999999999999999964 344555555555533221 2334
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 714 EELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+++.+++.+||+.||++|+ |++|+++
T Consensus 226 ~~~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 226 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 6788999999999999996 8999875
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-45 Score=388.56 Aligned_cols=249 Identities=23% Similarity=0.357 Sum_probs=198.8
Q ss_pred cccCccceEEEEEEEEcCC----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 484 GSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fG~Vykg~~~~~----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.+|+|+||+||+|++..+ ..||||++.... .....++|.+|+++|++++|||||+++|+|...+. ..++|
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv 107 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVV 107 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCC----CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-EEEEE
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc----CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-ceEEE
Confidence 3578899999999997532 357888875322 23345789999999999999999999999876443 57999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
||||++|+|.++++. ....+++..+++++.|+++||.|||+.+ |+||||||+|||+|+++.+||+|||+++...
T Consensus 108 ~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~--iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 108 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred EEEeecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC--cccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence 999999999998863 4456789999999999999999999988 9999999999999999999999999986432
Q ss_pred ----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004124 637 ----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|+|||.+....++.++|||||||++|||+||+.||.... +..++...+..+..+.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~-~~~~~~~~i~~g~~~~--------- 254 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLL--------- 254 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCCCC---------
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC-CHHHHHHHHHcCCCCC---------
Confidence 13456899999999999999999999999999999888875432 2333334444442221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004124 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
.+..+++++.+||.+||+.||++||+|.||++.|+++......+
T Consensus 255 -~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~ 298 (311)
T d1r0pa_ 255 -QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298 (311)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence 12234567899999999999999999999999999998765543
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-45 Score=393.56 Aligned_cols=244 Identities=19% Similarity=0.326 Sum_probs=195.8
Q ss_pred ccccccCccceEEEEEEEEc-CCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|++. +|+ .||+|++.... .....++|.+|++++++++|||||+++|+|.+++
T Consensus 12 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--- 84 (317)
T d1xkka_ 12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 84 (317)
T ss_dssp EEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC--------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS---
T ss_pred EEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 67889999999999999864 343 47777765322 1233568999999999999999999999998754
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++++||+.+|+|.+++.. ....+++..+++|+.|||.||+|||+++ ||||||||+|||++.++.+||+|||+++..
T Consensus 85 ~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~--iiHrDlKp~NIll~~~~~~kl~DFGla~~~ 161 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 161 (317)
T ss_dssp EEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred eeEEEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC--cccCcchhhcceeCCCCCeEeeccccceec
Confidence 5789999999999998763 4567999999999999999999999988 999999999999999999999999987632
Q ss_pred C-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004124 636 T-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. .++..|+|||.+.++.|+.++|||||||++|||+| |+.||.... ..+....+..+..+
T Consensus 162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~--~~~~~~~i~~~~~~------- 232 (317)
T d1xkka_ 162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGERL------- 232 (317)
T ss_dssp TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--GGGHHHHHHHTCCC-------
T ss_pred ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCCC-------
Confidence 1 23567999999999999999999999999999999 788886433 22233333333211
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..++.+++++.+|+.+||+.||++||||.||++.|+.+..
T Consensus 233 ---~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~ 272 (317)
T d1xkka_ 233 ---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272 (317)
T ss_dssp ---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence 1123445678999999999999999999999999987643
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.4e-44 Score=390.19 Aligned_cols=242 Identities=21% Similarity=0.297 Sum_probs=201.8
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~i 100 (350)
T d1koaa2 28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-----SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVM 100 (350)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH-----HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch-----hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 478899999999999999964 688999999865432 23467999999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCcEEEccccCccCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~~kLsDFGla~~~~ 636 (772)
|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+++ ||||||||+|||++ .++.+||+|||+++...
T Consensus 101 vmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~--iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp EECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EEEcCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC--CeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 9999999999999853 3456999999999999999999999998 99999999999995 46889999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+......... ..
T Consensus 178 ~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~~~-------~~ 248 (350)
T d1koaa2 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--ENDDETLRNVKSCDWNMDD-------SA 248 (350)
T ss_dssp TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCSCC-------GG
T ss_pred cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCCc-------cc
Confidence 356789999999999999999999999999999999999963 3445555555544322211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++++.+|+.+||+.||++|||++|+++.
T Consensus 249 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22345678999999999999999999999874
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.8e-44 Score=390.01 Aligned_cols=242 Identities=17% Similarity=0.284 Sum_probs=201.4
Q ss_pred ccccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEE
Q 004124 479 FSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++++.+|+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++ ..+
T Consensus 30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ 102 (352)
T d1koba_ 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-----LDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMV 102 (352)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEE
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch-----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEE
Confidence 358899999999999999996 4789999999865432 22457889999999999999999999999877 789
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCcEEEccccCccCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFSFWNNT 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~~kLsDFGla~~~ 635 (772)
+|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+++ ||||||||+||||+ .++.+||+|||+++..
T Consensus 103 ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~--iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~ 179 (352)
T d1koba_ 103 LILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKL 179 (352)
T ss_dssp EEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccccccccccccCCCeEEEeecccceec
Confidence 99999999999988742 3446999999999999999999999998 99999999999998 5789999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004124 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+..|+.++||||+||++|||+||+.||.. .+..+....+..+.......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~~~~~------- 250 (352)
T d1koba_ 180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCDWEFDED------- 250 (352)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHHCCCCCCSS-------
T ss_pred CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCCcc-------
Confidence 2 355679999999999999999999999999999999999953 33444445555443322211
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....++++.+|+.+||+.||++|||+.|+++
T Consensus 251 ~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11234567889999999999999999999976
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-45 Score=382.46 Aligned_cols=245 Identities=20% Similarity=0.334 Sum_probs=194.2
Q ss_pred ccccccCccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.. +..||||.+.... .....+.|.+|+++|++++|||||+++|++.++ ..
T Consensus 10 ~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~ 82 (273)
T d1mp8a_ 10 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PV 82 (273)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SC
T ss_pred EEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---eE
Confidence 677889999999999998653 3457777764322 234457899999999999999999999999653 46
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..++.++.||++||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 83 ~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~--iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp EEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC--eeccccchhheeecCCCcEEEccchhheecc
Confidence 899999999999998753 3456899999999999999999999988 9999999999999999999999999986432
Q ss_pred ----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 637 ----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+....|+.++|||||||++|||+| |+.||.... ..+....+..+...
T Consensus 160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~--~~~~~~~i~~~~~~--------- 228 (273)
T d1mp8a_ 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENGERL--------- 228 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCCC---------
T ss_pred CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCCC---------
Confidence 23457999999999999999999999999999998 888886433 23333333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..+++++.+||.+||+.||++||||.||++.|+.+.+.
T Consensus 229 -~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 269 (273)
T d1mp8a_ 229 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269 (273)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 12234557899999999999999999999999999987653
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-44 Score=386.76 Aligned_cols=249 Identities=24% Similarity=0.416 Sum_probs=199.6
Q ss_pred ccccccCccceEEEEEEEEcC-Cc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCCceE
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS-GV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~-~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+++. +. .||||++..... ....++|.+|+++|+++ +|||||+++|+|.+.+ ..
T Consensus 13 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~ 86 (309)
T d1fvra_ 13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS----KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 86 (309)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EE
T ss_pred EEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC----hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC--ee
Confidence 566788999999999999754 44 466666543221 22346799999999999 7999999999999877 67
Q ss_pred EEEEeccCCCChhhhhhhh--------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004124 557 MMVFEYSPNGSLFEHLHIQ--------------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~--------------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
++||||+++|+|.++++.. ....++|..+.+++.|||+||.|||+.+ |+||||||+|||++.++
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~--iiHrDlkp~NIL~~~~~ 164 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 164 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGG
T ss_pred EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC--ccccccccceEEEcCCC
Confidence 9999999999999998643 2367999999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCC-cccCCCCCHHHHHHHHhhc
Q 004124 623 AAKISDFSFWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRI-SYSIENGSLENWASEYLKG 693 (772)
Q Consensus 623 ~~kLsDFGla~~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~-P~~~~~~~~~~~~~~~~~~ 693 (772)
.+||+|||+++.. ..++..|+|||.+....|+.++|||||||++|||+||.. ||. +.+..+....+..+
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~--~~~~~~~~~~i~~~ 242 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC--GMTCAELYEKLPQG 242 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT--TCCHHHHHHHGGGT
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCC--CCCHHHHHHHHHhc
Confidence 9999999997632 235567999999999999999999999999999999765 553 33444444444333
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004124 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+ ..+..+++++.+||.+||+.||++||||.||++.|+++.+...
T Consensus 243 ~~~----------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~ 288 (309)
T d1fvra_ 243 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288 (309)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC----------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence 211 1223345789999999999999999999999999999876443
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-44 Score=384.78 Aligned_cols=238 Identities=19% Similarity=0.259 Sum_probs=200.4
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||+|++.+..... ....+.+.+|+++|++++|||||++++++.+.+ ..|+|
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~iv 83 (337)
T d1o6la_ 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFV 83 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC--HHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc--ccccc
Confidence 7788999999999999996 578999999987543222 223467899999999999999999999999887 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~--- 636 (772)
||||++|+|.+++.. ...+++.....++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 84 ~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC--ccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 999999999999853 456899999999999999999999998 9999999999999999999999999987432
Q ss_pred ------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004124 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||++.+..|+.++||||+||++|||+||+.||... +..+.......+...+ +.
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~--~~~~~~~~i~~~~~~~-----------p~ 226 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIRF-----------PR 226 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------CT
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc--CHHHHHHHHhcCCCCC-----------Cc
Confidence 2456799999999999999999999999999999999999643 4445555555443222 23
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 711 NVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
..+.++.+|+.+||+.||++||+ +.|+++
T Consensus 227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 34567889999999999999995 788875
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.9e-44 Score=376.76 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=203.7
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC--ceE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~ 556 (772)
+++++.+|+|+||+||+|+. .+++.||||++......+ ....+.|.+|++++++++|||||++++++...+. ...
T Consensus 9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccC--HHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 47888999999999999996 578899999987543322 3345679999999999999999999999876542 246
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
|+||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++..+|+|||.++..
T Consensus 87 ~lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~--iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~ 162 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIA 162 (277)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred EEEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCccccCcccccCccccceeehhhhhhhhc
Confidence 899999999999998753 456999999999999999999999988 999999999999999999999999976422
Q ss_pred -----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004124 636 -----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 -----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.......+........
T Consensus 163 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~~~~~~~~~~~~~--- 237 (277)
T d1o6ya_ 163 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--SPVSVAYQHVREDPIPPSAR--- 237 (277)
T ss_dssp ----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCCCGGGT---
T ss_pred cccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc--CHHHHHHHHHhcCCCCCchh---
Confidence 23567899999999999999999999999999999999999643 34444444554432221111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhh
Q 004124 705 LKSFQENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEIT 745 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~ 745 (772)
.+..++++.+++.+||+.||++|| |++++...|.++.
T Consensus 238 ----~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 238 ----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp ----SSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----ccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 123456788999999999999999 8999999988764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-44 Score=382.41 Aligned_cols=249 Identities=20% Similarity=0.328 Sum_probs=191.3
Q ss_pred cccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCC
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+++++.+|+|+||+||+|++. +++.||||++..... ....+.+.+|++.+.++ +|+|||.+++++...+
T Consensus 15 y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~----~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp EEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred EEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 377889999999999999864 236799998764322 23456788888888887 7899999999987654
Q ss_pred CceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 618 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl 618 (772)
. ..++|||||++|+|.++++... ...++|..++.++.||++||+|||+++ ||||||||+||||
T Consensus 91 ~-~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~--ivHrDlKp~NILl 167 (299)
T d1ywna1 91 G-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL 167 (299)
T ss_dssp S-CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEE
T ss_pred C-eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC--CcCCcCCccceeE
Confidence 3 4699999999999999997432 235899999999999999999999988 9999999999999
Q ss_pred CCCCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCC-CcccCCCCCHHHH
Q 004124 619 TEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENW 686 (772)
Q Consensus 619 d~~~~~kLsDFGla~~~-----------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~-~P~~~~~~~~~~~ 686 (772)
++++++||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||. .||...... ...
T Consensus 168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~ 246 (299)
T d1ywna1 168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEF 246 (299)
T ss_dssp CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHH
T ss_pred CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HHH
Confidence 99999999999998632 12455799999999999999999999999999999975 567533222 222
Q ss_pred HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 687 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
......+..+ ..++.+++++.++|.+||+.||++||||.||++.|+++.+
T Consensus 247 ~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCC----------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2222222211 1223345678999999999999999999999999998864
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-44 Score=379.77 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=196.3
Q ss_pred ccccccCccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC
Q 004124 481 NIIGSFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
++++.+|+|+||.||+|+... +..||||++.... ......++.+|+..+.++ +|||||+++|+|.++
T Consensus 16 ~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp EEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred EEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc----ChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 678899999999999998532 2468999876433 233456789999999988 899999999999987
Q ss_pred CCceEEEEEeccCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++|||||++|+|.+++.... ...+++..+++++.||+.||+|||+.+ ||||||||+|||
T Consensus 92 ~--~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~--ivHrDiKp~NiL 167 (299)
T d1fgka_ 92 G--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVL 167 (299)
T ss_dssp S--SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEE
T ss_pred C--eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC--EEeeeeccccee
Confidence 6 5799999999999999996442 245899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++... .++..|+|||.+.++.|+.++||||||||+|||+| |..||.. ....+
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~--~~~~~ 245 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEE 245 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHH
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC--CCHHH
Confidence 9999999999999876331 23457899999999999999999999999999998 6777743 33333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
....+..+..+ ..+..+++++.+|+.+||+.||++||||.||++.|+++.+.
T Consensus 246 ~~~~i~~~~~~----------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~ 297 (299)
T d1fgka_ 246 LFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297 (299)
T ss_dssp HHHHHHTTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC----------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence 33333332211 11223456789999999999999999999999999998764
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-43 Score=383.84 Aligned_cols=239 Identities=17% Similarity=0.255 Sum_probs=200.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.||+|+||+||+|+.+ +|+.||||++......+ ....+.+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 43 y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~ 118 (350)
T d1rdqe_ 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYM 118 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccC--HHHHHHHHHHHHHHHHcCCCcEeeccccccccc--cccc
Confidence 378899999999999999974 68999999986433221 223467899999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~-- 636 (772)
||||+.+|+|.+++.. ...+++..+..|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...
T Consensus 119 v~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~--iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred ccccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence 9999999999999853 346899999999999999999999998 9999999999999999999999999987543
Q ss_pred ----CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004124 637 ----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 637 ----~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
.++..|+|||++.+..|+.++|||||||++|||+||+.||.. .+.......+..+.... +...
T Consensus 195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~--~~~~~~~~~i~~~~~~~-----------p~~~ 261 (350)
T d1rdqe_ 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA--DQPIQIYEKIVSGKVRF-----------PSHF 261 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC-----------CTTC
T ss_pred cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC--cCHHHHHHHHhcCCCCC-----------CccC
Confidence 256689999999999999999999999999999999999964 34445555555443221 2234
Q ss_pred HHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004124 713 LEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+.++.+++.+||+.||++|+ |++|+++
T Consensus 262 s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 56788999999999999994 8999875
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.3e-44 Score=387.77 Aligned_cols=242 Identities=19% Similarity=0.225 Sum_probs=191.9
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +|+.||||++........ .........+|+++++.++|||||++++++.+.+ ..|+
T Consensus 7 ~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--~~~i 84 (364)
T d1omwa3 7 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSF 84 (364)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEE
T ss_pred eeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--EEEE
Confidence 67889999999999999965 689999999865432211 1111122344577888889999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ...+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++..
T Consensus 85 vmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~--iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~ 160 (364)
T d1omwa3 85 ILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 160 (364)
T ss_dssp EECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred EEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC--ccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence 9999999999999864 356889999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhc-cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ----TAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~aPE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+. +..|+.++|||||||++|||+||+.||........ ........... ..+
T Consensus 161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~-----------~~~ 229 (364)
T d1omwa3 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----------ELP 229 (364)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC-----------CCC
T ss_pred cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC-----------CCC
Confidence 33677899999986 45689999999999999999999999975543322 22221111111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...++++.+||.+||+.||++||| ++|+++
T Consensus 230 ~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 230 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 234567899999999999999999 677765
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-44 Score=381.10 Aligned_cols=250 Identities=17% Similarity=0.193 Sum_probs=188.2
Q ss_pred cccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.++.||+|+||+||+|+. .+|+.||||++.............+.+.+|+++|++++|||||++++++..++ ..++||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~--~~~ivm 79 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVF 79 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--ceeehh
Confidence 467789999999999996 46899999998765433322333457999999999999999999999999877 679999
Q ss_pred eccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004124 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~---- 636 (772)
||+.+|++..+.. ....+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 80 E~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 80 DFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp ECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hhhcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc--eecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 9999887766553 4456888899999999999999999998 9999999999999999999999999986432
Q ss_pred -----CCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCCCccccC------
Q 004124 637 -----AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDIVD------ 702 (772)
Q Consensus 637 -----~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~d------ 702 (772)
.++..|+|||.+.. ..|+.++|||||||++|||+||+.||.... ..+....+... ........+
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~--~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 233 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSLPD 233 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC--HHHHHHHHHHhcCCCChhhccchhccch
Confidence 24567999999864 467999999999999999999999996432 22222222211 000000000
Q ss_pred ----Ccc-----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 703 ----PTL-----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 ----~~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... ........+++.+|+.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 234 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 000 1111234568999999999999999999999986
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.4e-43 Score=369.07 Aligned_cols=244 Identities=20% Similarity=0.305 Sum_probs=199.2
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchh----hhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW----SKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~----~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~ 554 (772)
++++.||+|+||+||+|+. .+++.+|||++........ .+...+.+.+|+++|++++ |||||++++++.+++
T Consensus 6 ~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~-- 83 (277)
T d1phka_ 6 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-- 83 (277)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred EEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc--
Confidence 7889999999999999996 4788999999876543221 1234467899999999997 999999999999877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..|||||||++|+|.++++. ...+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 159 (277)
T d1phka_ 84 FFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 159 (277)
T ss_dssp EEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC--CcccccccceEEEcCCCCeEEccchheeE
Confidence 78999999999999999964 456999999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhc------cCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004124 635 TT--------AAKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .++..|+|||.+. ...++.++||||+||++|||+||+.||... +.......+..+.....
T Consensus 160 ~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~--~~~~~~~~i~~~~~~~~-- 235 (277)
T d1phka_ 160 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFG-- 235 (277)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC--
T ss_pred ccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC--CHHHHHHHHHhCCCCCC--
Confidence 32 2455789999874 345788999999999999999999999643 33334444444432211
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ .....++++.+++.+||+.||++|||++||++
T Consensus 236 -~~----~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 236 -SP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp -TT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -Cc----ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11 12245578999999999999999999999865
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-44 Score=380.12 Aligned_cols=246 Identities=21% Similarity=0.330 Sum_probs=202.3
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||+||+|++. .+..||||++.... .......|.+|++++++++|||||+++|+|...+
T Consensus 23 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~----~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-- 96 (308)
T d1p4oa_ 23 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 96 (308)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS----CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--
T ss_pred EEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc----ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC--
Confidence 67788999999999999864 35689999886332 2334567999999999999999999999998776
Q ss_pred eEEEEEeccCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++|||||++|+|.++++... ...++|..+.+|+.|+|+||.|||+++ |+||||||+|||+|+++++||
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~--ivHrDlk~~NiLld~~~~~Kl 174 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKI 174 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeeceEcCCceeecCCceEEE
Confidence 5699999999999999986432 134799999999999999999999988 999999999999999999999
Q ss_pred ccccCccCCC-----------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCC-CcccCCCCCHHHHHHHHhhcC
Q 004124 627 SDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGR-ISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 sDFGla~~~~-----------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~-~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+ .||. +.+..++...+..+.
T Consensus 175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~--~~~~~~~~~~i~~~~ 252 (308)
T d1p4oa_ 175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ--GLSNEQVLRFVMEGG 252 (308)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT--TSCHHHHHHHHHTTC
T ss_pred eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHhCC
Confidence 9999986332 2346799999999999999999999999999999985 5563 345555555554432
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004124 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. ...+..++.++.++|.+||+.+|++||||.||++.|++..+
T Consensus 253 ~----------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 253 L----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred C----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1 11223345679999999999999999999999999987644
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=377.38 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=191.8
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC--ceEEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMMV 559 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~~LV 559 (772)
+.+.+|+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|...+. ...++|
T Consensus 7 l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 456788999999999997 57899999875332 111223445666678899999999999986542 257899
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
||||++|+|.++++. ..++|..+++++.|+|.||+|+|+. .++||||||||+||||++++.+||+|||+++
T Consensus 80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 999999999999963 3589999999999999999999974 2459999999999999999999999999875
Q ss_pred CC-------------CCCCccccchhhhccCC------CCCCCchHHHHHHHHHHHcCCCcccCCCC------------C
Q 004124 634 NT-------------TAAKTGSAAMELLETSA------VDLESNVYSFGTILFEMITGRISYSIENG------------S 682 (772)
Q Consensus 634 ~~-------------~~~~~~~~aPE~~~~~~------~s~ksDVwSfGvvL~ELltG~~P~~~~~~------------~ 682 (772)
.. ..++..|+|||.+.... ++.|+|||||||+||||+||..|+..... .
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 32 23567899999986542 57789999999999999999887742111 1
Q ss_pred HHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004124 683 LENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
........... ...+|.+.. ...+...++.+|+.+||+.||++||||.||++.|+++.+..
T Consensus 237 ~~~~~~~~~~~-----~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 237 SVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTT-----SCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhc-----cccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 11112222211 111222221 12356678999999999999999999999999999987643
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=380.03 Aligned_cols=238 Identities=18% Similarity=0.244 Sum_probs=195.3
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHh-cCCCCcccceeEEEEcCCCceEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS-KVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~-~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||||++....... ....+.+..|+.++. .++|||||++++++.+++ ..|+
T Consensus 5 ~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~--~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~--~~yi 80 (320)
T d1xjda_ 5 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFF 80 (320)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC--hHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC--ceeE
Confidence 67889999999999999975 68899999986532211 222345667777665 689999999999999887 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~--- 635 (772)
|||||++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 81 vmEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~--iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 81 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCcccceeecCCCceeccccchhhhcccc
Confidence 9999999999999863 456889999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004124 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||... +..+.......+.... +
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~~~-----------p 223 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPFY-----------P 223 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCC-----------C
Confidence 23566799999999999999999999999999999999999643 4444444444442221 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 004124 710 ENVLEELLVVIKNCVHPDPKQRPSMR-GIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~-evl~ 739 (772)
..++.++.+|+.+||+.||++||++. |+++
T Consensus 224 ~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 224 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 23456789999999999999999995 6753
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-43 Score=377.71 Aligned_cols=248 Identities=23% Similarity=0.323 Sum_probs=198.0
Q ss_pred ccccccCccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcCCC
Q 004124 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||.||+|++. +++.||||++..... .....+|.+|+.+++++ +|||||+++|+|.+.+
T Consensus 26 ~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~- 100 (311)
T d1t46a_ 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (311)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred EEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC----HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC-
Confidence 56778899999999999863 456899998864332 23456799999999999 6999999999998877
Q ss_pred ceEEEEEeccCCCChhhhhhhhc----------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004124 554 FTRMMVFEYSPNGSLFEHLHIQE----------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~----------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
..++|||||++|+|.++++... ...+++..+++++.||++||+|||+++ ||||||||+|||
T Consensus 101 -~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~--ivHrDLKp~NIl 177 (311)
T d1t46a_ 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNIL 177 (311)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEE
T ss_pred -EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccccccccc
Confidence 5699999999999999986432 235899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCc-ccCCCCCHHH
Q 004124 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRIS-YSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kLsDFGla~~~~~-----------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P-~~~~~~~~~~ 685 (772)
++.++.+|++|||+++.... ++..|+|||.+....++.++|||||||++|||+|+..| |..... ...
T Consensus 178 ~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~-~~~ 256 (311)
T d1t46a_ 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSK 256 (311)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-SHH
T ss_pred ccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCH-HHH
Confidence 99999999999999874332 24568999999999999999999999999999995444 533222 222
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004124 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+...+...... ..+...+.++.+||.+||+.||++||||.||+++|+++...
T Consensus 257 -~~~~i~~~~~~---------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~ 308 (311)
T d1t46a_ 257 -FYKMIKEGFRM---------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (311)
T ss_dssp -HHHHHHHTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHHHhcCCCC---------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence 22222221111 11123456789999999999999999999999999886543
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-43 Score=376.17 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=199.1
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||.+..+.. ....+.+|+++|++++|||||++++++.+.+ ..|+
T Consensus 7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~------~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~l 78 (321)
T d1tkia_ 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT------DQVLVKKEISILNIARHRNILHLHESFESME--ELVM 78 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH------HHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc------cHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEE
Confidence 478899999999999999975 678899999865432 2356889999999999999999999999877 7899
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEccccCccCCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kLsDFGla~~~~ 636 (772)
|||||++|+|.+++.. ....+++.++..|+.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++...
T Consensus 79 vmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~--iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~ 155 (321)
T d1tkia_ 79 IFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC--CCcccccccceeecCCCceEEEEcccchhhccc
Confidence 9999999999999853 2346899999999999999999999998 999999999999985 4589999999986543
Q ss_pred C--------CCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004124 637 A--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 ~--------~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. ++..|+|||...+..|+.++||||+||++|||+||+.||... +..+....+..+....... .
T Consensus 156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~-------~ 226 (321)
T d1tkia_ 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDEE-------A 226 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCHH-------H
T ss_pred cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCChh-------h
Confidence 2 456789999999999999999999999999999999999643 3444555555443222111 1
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.++.+|+.+||+.||++|||+.|+++
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1224567889999999999999999999987
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-43 Score=377.42 Aligned_cols=241 Identities=17% Similarity=0.271 Sum_probs=190.4
Q ss_pred ccccc-cCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC-CCCcccceeEEEEcC--CCce
Q 004124 481 NIIGS-FSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED--EPFT 555 (772)
Q Consensus 481 ~iig~-lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~--~~~~ 555 (772)
+++++ +|+|+||+||+|+. .+++.||||++... ..+.+|++++.++ +|||||++++++.+. ....
T Consensus 14 ~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~ 83 (335)
T d2ozaa1 14 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 83 (335)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred EEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCE
Confidence 67765 89999999999996 57899999987532 3567899987655 899999999998652 2225
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCc
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kLsDFGla 632 (772)
.|+|||||++|+|.+++..+....+++..+..|+.||+.||+|||+.+ |+||||||+|||+++ ++.+||+|||++
T Consensus 84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~--iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC--Ccccccccccccccccccccccccccccee
Confidence 799999999999999997554567999999999999999999999998 999999999999985 567999999998
Q ss_pred cCC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCH-HHHHHHHhhcCCCCccccCC
Q 004124 633 NNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-ENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 633 ~~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 703 (772)
+.. ..++..|+|||.+.+..|+.++|||||||++|||+||+.||...+... ......... ... .
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~----~~~---~ 234 (335)
T d2ozaa1 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ---Y 234 (335)
T ss_dssp EECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC----SCS---S
T ss_pred eeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh----cCC---C
Confidence 632 235678999999999999999999999999999999999997543221 111100000 000 0
Q ss_pred ccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 704 TLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+ .....+++++.+|+.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 235 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 011 1123456789999999999999999999999873
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-42 Score=369.82 Aligned_cols=254 Identities=19% Similarity=0.296 Sum_probs=193.6
Q ss_pred ccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||||++...... +...+++.+|+++|++++|||||++++++.+++ ..++|
T Consensus 5 ~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~--~~~iv 79 (298)
T d1gz8a_ 5 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLV 79 (298)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC---hHHHHHHHHHHHHHHhCCCCcEEEecccccccc--ceeEE
Confidence 6788999999999999996 57899999998644321 222467999999999999999999999999877 78999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
|||+.+ ++.+++.......+++..+..++.|++.||+|||+++ ||||||||+|||++.++.+||+|||+++..
T Consensus 80 ~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~--IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 80 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred EeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC--EEccccCchheeecccCcceeccCCcceeccCCc
Confidence 999965 5556665555667999999999999999999999998 999999999999999999999999987422
Q ss_pred -----CCCCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc--------
Q 004124 636 -----TAAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV-------- 701 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 701 (772)
..++..|+|||.+.... ++.++||||+||++|||++|+.||...+ ..+.............+..
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRIFRTLGTPDEVVWPGVTSMP 234 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCC--HHHHHHHHHHhcCCCchhhcccccccc
Confidence 24567889999876655 5789999999999999999999996433 2222222221100000000
Q ss_pred ----------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 004124 702 ----------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEI 744 (772)
Q Consensus 702 ----------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i 744 (772)
...........++++.+|+.+||+.||++|||+.|+++. ++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~ 289 (298)
T d1gz8a_ 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289 (298)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence 000011112345688999999999999999999999874 4444
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.9e-42 Score=362.34 Aligned_cols=249 Identities=18% Similarity=0.246 Sum_probs=194.2
Q ss_pred cccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+.++++.||||++...... ....++|.+|+.+|++++|||||++++++...+ ..+++
T Consensus 4 Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~i~ 78 (286)
T d1ob3a_ 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLV 78 (286)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEE
T ss_pred ceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcC---hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC--ceeEE
Confidence 3788999999999999999999999999998654322 223467999999999999999999999999887 67999
Q ss_pred EeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004124 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~---- 635 (772)
+||+.++.+..+.. ....+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||.+...
T Consensus 79 ~e~~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~--IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~ 154 (286)
T d1ob3a_ 79 FEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (286)
T ss_dssp EECCSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEeehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc--EEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence 99998776666643 4467999999999999999999999988 999999999999999999999999986421
Q ss_pred -----CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCCCcccc------
Q 004124 636 -----TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLKDIV------ 701 (772)
Q Consensus 636 -----~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~------ 701 (772)
..++..|+|||.+.. ..++.++||||+||++|||++|+.||...+ ..+....... +........
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (286)
T d1ob3a_ 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNVTELP 232 (286)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC--HHHHHHHHHHhhCCCChhhccchhhhh
Confidence 224567899999864 457899999999999999999999996432 2222222211 111000000
Q ss_pred --CC--------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 702 --DP--------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 --d~--------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. .........++++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 001122334567899999999999999999999975
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-41 Score=358.96 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=190.7
Q ss_pred ccccccccCccceEEEEEEEEc-C-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcC---CCCcccceeEEEEcC--
Q 004124 479 FSNIIGSFSDGTVGTVYKGTLS-S-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEED-- 551 (772)
Q Consensus 479 f~~iig~lg~G~fG~Vykg~~~-~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~-- 551 (772)
-+++++.+|+|+||+||+|+.. + ++.||||++......+. ....+.+|+++|+.+ +|||||++++++...
T Consensus 8 ~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch---HHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3588999999999999999973 4 56789999876443221 122455677766655 899999999998642
Q ss_pred -CCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004124 552 -EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 552 -~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFG 630 (772)
.....+++|||+.+|++.... ......+++.....++.|++.||+|||+.+ ||||||||+|||+++++.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~--ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecCCCccEEEEcCCCCeeecchh
Confidence 223579999999887665443 345567899999999999999999999998 9999999999999999999999999
Q ss_pred CccCC--------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCCCc--
Q 004124 631 FWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLK-- 698 (772)
Q Consensus 631 la~~~--------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~~~-- 698 (772)
+++.. ..++..|+|||.+.+..|+.++||||+||++|||+||+.||...+ ..+....+.. +.....
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~ 239 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDW 239 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCGGGS
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhhCCCchhcc
Confidence 87643 345678999999999999999999999999999999999996433 2222222221 100000
Q ss_pred ------------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 699 ------------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ------------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.........+....++++.+|+.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00001111223345577889999999999999999999976
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-42 Score=358.76 Aligned_cols=235 Identities=18% Similarity=0.341 Sum_probs=188.5
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhh-hHHHHHHHHHHHHhcCC--CCcccceeEEEEcCCCce
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~-~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~ 555 (772)
+++.+.+|+|+||+||+|+.. +++.||||++......+... ....++.+|+++|++++ |||||++++++.+++ .
T Consensus 6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~--~ 83 (273)
T d1xwsa_ 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--S 83 (273)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--E
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC--e
Confidence 477788999999999999964 68999999987543222111 11234778999999996 899999999999877 7
Q ss_pred EEEEEeccCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCcc
Q 004124 556 RMMVFEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kLsDFGla~ 633 (772)
.++||||+.+ +++.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~--iiHrDiKp~NIll~~~~~~vkl~DFG~a~ 159 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGA 159 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccccCcccceEEecCCCeEEECccccce
Confidence 7999999976 577777743 456999999999999999999999998 999999999999985 4799999999985
Q ss_pred CC-------CCCCccccchhhhccCCC-CCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004124 634 NT-------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~-------~~~~~~~~aPE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. ..++..|+|||.+.+..+ +.++||||+||++|||+||+.||.... ....+....
T Consensus 160 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------~i~~~~~~~-------- 223 (273)
T d1xwsa_ 160 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRGQVFF-------- 223 (273)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHHHCCCCC--------
T ss_pred ecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--------HHhhcccCC--------
Confidence 32 235678999999987765 577899999999999999999995321 122222211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...++++.+++.+||+.||++|||++|+++
T Consensus 224 ---~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 224 ---RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp ---SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 1223467889999999999999999999975
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=360.81 Aligned_cols=259 Identities=19% Similarity=0.263 Sum_probs=190.7
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+. .+|+.||||++..... .....+.+.+|+++|++++|||||+++++|...+. .
T Consensus 20 Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 20 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc---ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 47889999999999999996 4689999999864322 23445689999999999999999999999976542 2
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+.++||||+ +++|..+.+ ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+|++|||+++.
T Consensus 97 ~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~--IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~ 170 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 170 (346)
T ss_dssp CCEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC--CcccccCcchhhcccccccccccccceec
Confidence 469999999 557776653 356999999999999999999999998 99999999999999999999999999864
Q ss_pred C------CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh--hcCCC---------
Q 004124 635 T------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KGEQP--------- 696 (772)
Q Consensus 635 ~------~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~--~~~~~--------- 696 (772)
. ..++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+.. ....... .+..+
T Consensus 171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T d1cm8a_ 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEFVQRLQS 248 (346)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH--HHHHHHHhccCCCcHHHHhhhcc
Confidence 3 335668899999865 45789999999999999999999999644321 1111111 11000
Q ss_pred ---------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhcCC
Q 004124 697 ---------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEP 749 (772)
Q Consensus 697 ---------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~~~ 749 (772)
..+...............++.+|+.+||..||++|||+.|+++. ++++.....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~ 312 (346)
T d1cm8a_ 249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 312 (346)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred hhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccc
Confidence 00011111112223345678899999999999999999999975 666554433
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-40 Score=351.69 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=196.4
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++...... +++..|++++++++|+|+|..++.+...+. ..++
T Consensus 9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~-~~~i 80 (299)
T d1ckia_ 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 80 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-------CCHHHHHHHHHHSTTSTTCCCEEEEEEETT-EEEE
T ss_pred EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-------HHHHHHHHHHHHccCCCcccEEEEEEecCC-EEEE
Confidence 57888999999999999996 46889999987654321 357889999999988877766665543332 5799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kLsDFGla~~~ 635 (772)
||||+ +|+|...+. .....+++..+..++.|++.||+|||+++ ||||||||+|||++ .+..+||+|||+++..
T Consensus 81 vme~~-~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~ 156 (299)
T d1ckia_ 81 VMELL-GPSLEDLFN-FCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156 (299)
T ss_dssp EEECC-CCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCSSCEEC
T ss_pred EEEEc-CCchhhhhh-hccCCCcHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHhhccccccCCCceeeeeccCcceec
Confidence 99999 567766654 34467999999999999999999999998 99999999999986 4567999999998632
Q ss_pred C----------------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhcCCCCc
Q 004124 636 T----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKGEQPLK 698 (772)
Q Consensus 636 ~----------------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~~~~~~ 698 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||........ ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~---- 232 (299)
T d1ckia_ 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK---- 232 (299)
T ss_dssp BCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH----
T ss_pred cccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhccc----
Confidence 1 356689999999999999999999999999999999999964332211 1111110000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004124 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
...........+++++.+++..||+.+|++||++.++.+.|+++..... .....+..|+-+.
T Consensus 233 --~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~---~~~~~~~Dw~~~~ 294 (299)
T d1ckia_ 233 --MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG---FSYDYVFDWNMLK 294 (299)
T ss_dssp --HHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT---CCCSCCCHHHHGG
T ss_pred --CCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC---CCCCCCcCchhhc
Confidence 0000111223345788999999999999999999999999988744221 1122356786654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-40 Score=357.00 Aligned_cols=252 Identities=16% Similarity=0.181 Sum_probs=187.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCc--eE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF--TR 556 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~--~~ 556 (772)
+++++.+|+|+||+||+|+. .+|+.||||++..... ....+++.+|+++|++++|||||++++++...... ..
T Consensus 10 Y~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH----QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp EEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC----HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred eEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC----hHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 47899999999999999985 5789999999864331 33456799999999999999999999999764311 12
Q ss_pred EEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004124 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~- 635 (772)
++++||+.+|+|.+++.. ..+++..+..++.|++.||+|||+++ ||||||||+|||++.++.+||+|||+++..
T Consensus 86 ~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~--iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~ 160 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 160 (345)
T ss_dssp EEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence 455566779999999853 46899999999999999999999998 999999999999999999999999987532
Q ss_pred -----------CCCCccccchhhh-ccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC------
Q 004124 636 -----------TAAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL------ 697 (772)
Q Consensus 636 -----------~~~~~~~~aPE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~------ 697 (772)
..++..|+|||.+ ....++.++||||+||++|||+||+.||.........+...........
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T d1pmea_ 161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 240 (345)
T ss_dssp GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhh
Confidence 2245578999997 4556789999999999999999999999654321111111111110000
Q ss_pred ------------ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 698 ------------KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ------------~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.................++.+|+.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000001112234578899999999999999999999874
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-39 Score=349.83 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=187.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCC------
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 552 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------ 552 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... +...+++.+|+++|++++||||+++++++....
T Consensus 12 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT---TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred EEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 37899999999999999996 47899999998654332 223467889999999999999999999986532
Q ss_pred CceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004124 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla 632 (772)
....++||||++++.+..+. .....++......|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~~--ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp --CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhccCC--EEecCcCchheeecCCCcEEeeeccee
Confidence 12579999999887766543 34456888999999999999999999998 999999999999999999999999997
Q ss_pred cCC-------------CCCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCC
Q 004124 633 NNT-------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP 696 (772)
Q Consensus 633 ~~~-------------~~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~ 696 (772)
+.. ..++..|+|||.+.+. .|+.++||||+||++|||+||+.||.... .......... +...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCGSIT 242 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCC
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC--HHHHHHHHHHhcCCCC
Confidence 522 2245679999998654 68999999999999999999999996433 2222222111 1100
Q ss_pred ---CccccCC-----------ccccccH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 697 ---LKDIVDP-----------TLKSFQE-----NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ---~~~~~d~-----------~l~~~~~-----~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....... ......+ ....++.+|+.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 0000000 0000111 11346788999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-40 Score=346.52 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=195.9
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCCceEEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||+++.... .....+++.+|+.+|++++|||||++++++.+.+ ..++
T Consensus 4 y~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~i 78 (292)
T d1unla_ 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTL 78 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS---STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred CEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC---ChHHHHHHHHHHHHHHhcCcCCEEeecccccccc--ceeE
Confidence 47889999999999999996 4788899999865432 2345678999999999999999999999999877 6799
Q ss_pred EEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004124 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~~~- 637 (772)
|+||+.+++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++....
T Consensus 79 v~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~--IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~ 154 (292)
T d1unla_ 79 VFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EEECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred Eeeeccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC--EeeecccCcccccccCCceeeeecchhhcccCC
Confidence 999999998887764 4567889999999999999999999998 99999999999999999999999999864322
Q ss_pred --------CCccccchhhhccCC-CCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CCcc-------c
Q 004124 638 --------AKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKD-------I 700 (772)
Q Consensus 638 --------~~~~~~aPE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~-------~ 700 (772)
+...++|||.+.... ++.++||||+||++|||++|+.||.... +..+....+..... +... .
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (292)
T d1unla_ 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-SHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred CccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCC-CHHHHHHHHHhhcCCCChhhhhhhhhc
Confidence 334678999886554 6899999999999999999999975433 33333332221100 0000 0
Q ss_pred c----------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 701 V----------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~----------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ............+++.+|+.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00111122344567889999999999999999999875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-40 Score=356.07 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=187.8
Q ss_pred ccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcC----CCce
Q 004124 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~----~~~~ 555 (772)
+.++.+|+|+||+||+|+.. +++.||||++..... .+.+|+++|++++|||||++++++... +..+
T Consensus 23 ~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~ 93 (350)
T d1q5ka_ 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93 (350)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred EeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence 55677899999999999975 689999999865321 234799999999999999999998643 2235
Q ss_pred EEEEEeccCCCChhhhhhh-hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCcc
Q 004124 556 RMMVFEYSPNGSLFEHLHI-QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~-~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kLsDFGla~ 633 (772)
.+||||||++|.+..+.+. .....+++..+..|+.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++
T Consensus 94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~--IiHrDiKp~NILl~~~~~~~kl~DFG~a~ 171 (350)
T d1q5ka_ 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171 (350)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC--CcccCCCcceEEEecCCCceeEecccchh
Confidence 7899999986644433322 24557999999999999999999999988 99999999999999774 89999999976
Q ss_pred CC--------CCCCccccchhhhcc-CCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cC--------
Q 004124 634 NT--------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GE-------- 694 (772)
Q Consensus 634 ~~--------~~~~~~~~aPE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~-------- 694 (772)
.. ..++..|+|||.+.+ ..|+.++||||+||++|||+||+.||..... .+....+.. +.
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp ECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHH
T ss_pred hccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCH--HHHHHHHHHHhCCChHHhhhh
Confidence 43 234567899998754 5789999999999999999999999964332 122111111 00
Q ss_pred -------CCCccccCCc-cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004124 695 -------QPLKDIVDPT-LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 695 -------~~~~~~~d~~-l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
.......... ........++++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 0000000000 011122345678999999999999999999999864 555544
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-40 Score=352.14 Aligned_cols=242 Identities=19% Similarity=0.296 Sum_probs=190.8
Q ss_pred cccccccCccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC-CcccceeEEEEcCCCc
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||+||+|+.. +|+.||||.+........ ....+.+.+|+++|++++| |||+++++++.+..
T Consensus 26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~-- 102 (322)
T d1vzoa_ 26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET-- 102 (322)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE-ESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--
T ss_pred eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccc-hHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC--
Confidence 378899999999999999852 478999999865432111 1123568899999999976 89999999998877
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
..++||||+.+|+|.+++.. ...+.......++.|++.||+|+|+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~--ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC--EEeccCCccceeecCCCCEEEeeccchhh
Confidence 78999999999999999863 345678888899999999999999998 99999999999999999999999998753
Q ss_pred C----------CCCCccccchhhhccC--CCCCCCchHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccc
Q 004124 635 T----------TAAKTGSAAMELLETS--AVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~----------~~~~~~~~aPE~~~~~--~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~ 700 (772)
. ..++..|++||.+... .++.++||||+||+||||+||+.||..... ..............+
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~---- 254 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP---- 254 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC----
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCC----
Confidence 2 2245578899998654 468899999999999999999999975432 233333333332211
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004124 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
.+...+.++.+++.+||+.||++||| ++|+++
T Consensus 255 -------~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 255 -------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -------CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 22345578999999999999999994 788764
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.9e-39 Score=346.80 Aligned_cols=245 Identities=16% Similarity=0.213 Sum_probs=188.8
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+. .+++.||||++.... .+++.+|+++|++++ ||||+++++++........+
T Consensus 37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 47889999999999999996 568899999885422 356889999999995 99999999999865444689
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccCccCCC
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSFWNNTT 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kLsDFGla~~~~ 636 (772)
+|||||++|+|..+. +.+++..+..++.||+.||+|||+++ ||||||||+|||++.+ ..+||+|||+++...
T Consensus 109 ~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g--IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~ 181 (328)
T d3bqca1 109 LVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181 (328)
T ss_dssp EEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred EEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc--cccccccccceEEcCCCCeeeecccccceecc
Confidence 999999999997764 35899999999999999999999998 9999999999999865 469999999986432
Q ss_pred --------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHH--HHh----------hcCC
Q 004124 637 --------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS--EYL----------KGEQ 695 (772)
Q Consensus 637 --------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~--~~~----------~~~~ 695 (772)
.++..|+|||.+.+. .++.++||||+||++|||++|+.||.........+.. ... ....
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 261 (328)
T d3bqca1 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 261 (328)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence 235578999997654 5799999999999999999999999754433222111 000 0000
Q ss_pred C----CccccCC----cc-----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004124 696 P----LKDIVDP----TL-----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~----~~~~~d~----~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....... .. .......++++.+|+.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0000000 00 0111334567899999999999999999999976
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.8e-39 Score=342.31 Aligned_cols=261 Identities=11% Similarity=0.166 Sum_probs=202.6
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC-CcccceeEEEEcCCCceEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... ...+.+|++.+..++| +||+.+++++.... ..+
T Consensus 7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~ 77 (293)
T d1csna_ 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNV 77 (293)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-------cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC--ccE
Confidence 478889999999999999965 688999998754322 1347788899999965 89999999998877 679
Q ss_pred EEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-----CCcEEEccccCc
Q 004124 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-----DYAAKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-----~~~~kLsDFGla 632 (772)
+||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 78 ~vme~~-~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g--iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a 153 (293)
T d1csna_ 78 LVIDLL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153 (293)
T ss_dssp EEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeecCcccccCCceEEccccee
Confidence 999999 6899988753 4457999999999999999999999998 999999999999974 578999999998
Q ss_pred cCC----------------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCC
Q 004124 633 NNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQ 695 (772)
Q Consensus 633 ~~~----------------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~ 695 (772)
+.. ..|+..|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (293)
T d1csna_ 154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233 (293)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred EEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccC
Confidence 632 12567899999999999999999999999999999999999754332 2222222111100
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHH
Q 004124 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWA 762 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~ 762 (772)
. .........+++++.+++..||+.+|++||+++.+.+.|+++....... ...+.+|+
T Consensus 234 ~------~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~---~~~~~Dw~ 291 (293)
T d1csna_ 234 S------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT---EDENFDWN 291 (293)
T ss_dssp H------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC---SCSCCGGG
T ss_pred C------CChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCC---CCCCCCCC
Confidence 0 0011122234567899999999999999999999999998876544322 23456775
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-38 Score=344.04 Aligned_cols=249 Identities=17% Similarity=0.218 Sum_probs=188.7
Q ss_pred cccccccCccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC----c
Q 004124 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+.. +|+.||||++...... .....++.+|+.++++++|||||++++++...+. .
T Consensus 19 Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp EEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred eEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcC---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 478899999999999999975 6899999998754322 3345678999999999999999999999975422 3
Q ss_pred eEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004124 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~ 634 (772)
+.|+||||+.++ +.+.++ ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+|++|||+++.
T Consensus 96 ~~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g--iiHrDlKP~Nil~~~~~~~kl~df~~~~~ 168 (355)
T d2b1pa1 96 DVYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_dssp EEEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred eeEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc--cccccCCccccccccccceeeechhhhhc
Confidence 689999999654 444442 45899999999999999999999998 99999999999999999999999998654
Q ss_pred CC--------CCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH----------------
Q 004124 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY---------------- 690 (772)
Q Consensus 635 ~~--------~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~---------------- 690 (772)
.. .++..|+|||.+.+..++.++||||+||++|||++|+.||...+. .......
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~--~~~~~~i~~~~~~~~~~~~~~~~ 246 (355)
T d2b1pa1 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_dssp ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHTTSC
T ss_pred cccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCH--HHHHHHHHHhccCCCHHHHHHhh
Confidence 32 345688999999999999999999999999999999999964331 1111111
Q ss_pred ------hhcCCCCc-----cc----cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004124 691 ------LKGEQPLK-----DI----VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 691 ------~~~~~~~~-----~~----~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
........ .. ..+.........+.++.+|+.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 11111000 00 0011111234567789999999999999999999999864
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-39 Score=346.45 Aligned_cols=255 Identities=17% Similarity=0.209 Sum_probs=190.1
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcccceeEEEEcCCC---ce
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... ....+++.+|+++|++++|||||++++++..... ..
T Consensus 20 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS---IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp EEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcC---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 47899999999999999996 57899999998754321 2334678999999999999999999999864321 12
Q ss_pred EEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004124 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsDFGla~~~ 635 (772)
.++++||+.+|+|.++++ .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+|++|||++...
T Consensus 97 ~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g--iiHrDiKp~NILi~~~~~~kl~dfg~a~~~ 171 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHT 171 (348)
T ss_dssp CCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred eEEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC--CcccccCCccccccccccccccccchhccc
Confidence 366778888999999984 346999999999999999999999998 999999999999999999999999997643
Q ss_pred C------CCCccccchhhhccC-CCCCCCchHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcc--------
Q 004124 636 T------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKD-------- 699 (772)
Q Consensus 636 ~------~~~~~~~aPE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~-------- 699 (772)
. .++..|+|||...+. .++.++||||+||++|||++|+.||...+. ......+.... .+..+
T Consensus 172 ~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (348)
T d2gfsa1 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKKISSE 249 (348)
T ss_dssp TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChHHhhhccch
Confidence 3 234568999987654 468999999999999999999999964432 11111111110 00000
Q ss_pred -----------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 004124 700 -----------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEI 744 (772)
Q Consensus 700 -----------~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i 744 (772)
...............++.+|+.+||+.||++|||+.|+++. ++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence 00000111112345678899999999999999999999873 4444
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-34 Score=314.75 Aligned_cols=253 Identities=16% Similarity=0.246 Sum_probs=185.6
Q ss_pred cccccccCccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-----------CCcccceeEE
Q 004124 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----------HKNFVNLIGY 547 (772)
Q Consensus 480 ~~iig~lg~G~fG~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----------HpNIV~l~g~ 547 (772)
+++++.+|+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++ |+|||+++++
T Consensus 15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~------~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~ 88 (362)
T d1q8ya_ 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK------VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 88 (362)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH------HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc------cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence 57899999999999999996 578999999986432 22356788888888775 5789999999
Q ss_pred EEcCCCceEEEEEeccCCCChhhh-hhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCC---
Q 004124 548 CEEDEPFTRMMVFEYSPNGSLFEH-LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDY--- 622 (772)
Q Consensus 548 ~~~~~~~~~~LV~Ey~~~GsL~~~-L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~--- 622 (772)
+........+++++++..+..... ........+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~--IvHrDlKp~NIll~~~~~~~ 166 (362)
T d1q8ya_ 89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPE 166 (362)
T ss_dssp EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETTT
T ss_pred eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC--cccccCChhHeeeeccCccc
Confidence 876544456777777766554333 333345678899999999999999999997 77 99999999999998654
Q ss_pred ---cEEEccccCccCC------CCCCccccchhhhccCCCCCCCchHHHHHHHHHHHcCCCcccCCCCC----HHHHHHH
Q 004124 623 ---AAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS----LENWASE 689 (772)
Q Consensus 623 ---~~kLsDFGla~~~------~~~~~~~~aPE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~----~~~~~~~ 689 (772)
.+|++|||.+... ..++..|+|||.+....++.++||||+||+++||++|+.||...... .......
T Consensus 167 ~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~ 246 (362)
T d1q8ya_ 167 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 246 (362)
T ss_dssp TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred ccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence 4999999987532 33566799999999999999999999999999999999999643221 1111111
Q ss_pred Hhh--cCC-------------------CCccccCCc----------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004124 690 YLK--GEQ-------------------PLKDIVDPT----------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738 (772)
Q Consensus 690 ~~~--~~~-------------------~~~~~~d~~----------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl 738 (772)
... +.. ....+.... ..........++.+|+.+|+..||++|||++|++
T Consensus 247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L 326 (362)
T d1q8ya_ 247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 326 (362)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 100 000 000000000 1123356778899999999999999999999998
Q ss_pred HH
Q 004124 739 AK 740 (772)
Q Consensus 739 ~~ 740 (772)
+.
T Consensus 327 ~H 328 (362)
T d1q8ya_ 327 NH 328 (362)
T ss_dssp TC
T ss_pred cC
Confidence 74
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.91 E-value=8.2e-25 Score=232.29 Aligned_cols=160 Identities=27% Similarity=0.462 Sum_probs=146.8
Q ss_pred cCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCc--eeeEEeCC----CcEEEEEecCCCCcc--cCchhhc
Q 004124 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCS--WFGVECSD----GKVVILNLRDLCLGG--MLAPELG 190 (772)
Q Consensus 119 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~--w~Gv~C~~----~~v~~l~L~~~~l~G--~ip~~l~ 190 (772)
-|.++|++||++||+.+. || ..+++|..+ .|||. |.||+|+. +||+.|+|++++++| .||++++
T Consensus 2 ~c~~~e~~aLl~~k~~~~-~~-~~l~sW~~~------~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~ 73 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLG-NP-TTLSSWLPT------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CC-GGGTTCCTT------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCCHHHHHHHHHHHHHCC-CC-CcCCCCCCC------CCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHh
Confidence 388999999999999985 45 368999643 48994 99999973 379999999999998 5899999
Q ss_pred CCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCE
Q 004124 191 QLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISE 269 (772)
Q Consensus 191 ~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~ 269 (772)
+|++|++|+|++ |+++|.||++++++++|++|||++|++.|..|..+.++..|+.++++.|.+.+.+|..+++++.|+.
T Consensus 74 ~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~ 153 (313)
T d1ogqa_ 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred cCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccce
Confidence 999999999997 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCccccccc
Q 004124 270 IQVDESWLTNAASRASC 286 (772)
Q Consensus 270 l~l~~N~l~g~~p~~~~ 286 (772)
+++++|.++|.+|....
T Consensus 154 l~l~~n~l~~~ip~~~~ 170 (313)
T d1ogqa_ 154 ITFDGNRISGAIPDSYG 170 (313)
T ss_dssp EECCSSCCEEECCGGGG
T ss_pred eeccccccccccccccc
Confidence 99999999999997543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=7e-22 Score=194.21 Aligned_cols=167 Identities=13% Similarity=0.061 Sum_probs=119.9
Q ss_pred cccccCccceEEEEEEEEcCCcEEEEEEeeecccc-------------hhhhhHHHHHHHHHHHHhcCCCCcccceeEEE
Q 004124 482 IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-------------DWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 482 iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~-------------~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
+-.++|+|+||+||+|+..+|+.||||++...... .........+.+|...+.+++|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 34578899999999999989999999986432110 01112234566789999999999999987653
Q ss_pred EcCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004124 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 549 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kLsD 628 (772)
. .+++|||++++.+.++ +......++.|+++|++|||+++ |+||||||+|||++++ .++|+|
T Consensus 84 --~----~~lvme~~~~~~~~~l---------~~~~~~~i~~ql~~~l~~lH~~g--iiHrDiKP~NILv~~~-~~~liD 145 (191)
T d1zara2 84 --G----NAVLMELIDAKELYRV---------RVENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVSEE-GIWIID 145 (191)
T ss_dssp --T----TEEEEECCCCEEGGGC---------CCSCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEETT-EEEECC
T ss_pred --C----CEEEEEeeccccccch---------hhHHHHHHHHHHHHHHHHHhhCC--EEEccCChhheeeeCC-CEEEEE
Confidence 1 2799999987655432 23335678999999999999998 9999999999999965 589999
Q ss_pred ccCccCCCCCCcc-ccch--h---hhccCCCCCCCchHHHHHHH
Q 004124 629 FSFWNNTTAAKTG-SAAM--E---LLETSAVDLESNVYSFGTIL 666 (772)
Q Consensus 629 FGla~~~~~~~~~-~~aP--E---~~~~~~~s~ksDVwSfGvvL 666 (772)
||.+......... +... + ....+.|+.++||||..--+
T Consensus 146 FG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 146 FPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 9998765432211 1110 1 01246788999999976443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.42 E-value=2.2e-13 Score=132.73 Aligned_cols=124 Identities=22% Similarity=0.267 Sum_probs=109.1
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004124 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|+|..|.|++ ..++.|+|++|.+++.++. .+..+++|+.|+|++|.+.+..+..+..+++|+.|+|++
T Consensus 8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 6799999963 2578999999999987755 468899999999999999999999999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++++-.|..|.++++|++|+|++|++++-.|..+..+++|++|+|++|.+.+...
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc
Confidence 99997667778999999999999999998777788899999999999999886543
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.31 E-value=5.8e-13 Score=139.78 Aligned_cols=115 Identities=21% Similarity=0.402 Sum_probs=109.3
Q ss_pred cEEEEEecC-CCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 170 KVVILNLRD-LCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~-~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..|+|++ |+++|.||+++++|++|++|+|++|.+.|..|..+..+.+|+.+++++|.+.+.+|..+++++.|+.+++
T Consensus 77 ~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l 156 (313)
T d1ogqa_ 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeec
Confidence 577899987 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCChhhcCCCCC-CEEEcCCCCCCCccccc
Q 004124 249 DNNQYLGGISPELHVLKVI-SEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L-~~l~l~~N~l~g~~p~~ 284 (772)
++|.++|.+|..+..+..+ +.++++.|.++|..|..
T Consensus 157 ~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~ 193 (313)
T d1ogqa_ 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred ccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999998876 89999999999988764
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=2.3e-11 Score=109.37 Aligned_cols=102 Identities=24% Similarity=0.264 Sum_probs=89.7
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.|+|++|+++ .++ .+..++.|++|+|++|.++ .+|+.++.+++|+.|++++|.+++ +| .++++++|++|++++|.
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCc
Confidence 5899999998 454 5899999999999999998 689899999999999999999995 55 58999999999999999
Q ss_pred Cccc-CChhhcCCCCCCEEEcCCCCCCC
Q 004124 253 YLGG-ISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 253 ~~G~-iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++.- -+..+..+++|+.|++++|.++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 8753 23568899999999999999874
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.15 E-value=5.3e-11 Score=115.45 Aligned_cols=107 Identities=15% Similarity=0.187 Sum_probs=95.5
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccC
Q 004124 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N 251 (772)
.++.++++|+ .||..+. +++++|+|++|.+++.++ ..+.++++|+.|+|++|++.+..+..+..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 5789999998 6888764 689999999999998764 46789999999999999999999999999999999999999
Q ss_pred CCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 252 QYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 252 ~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++++-.|..+.++++|+.|+|++|.+++-.|
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~ 119 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMP 119 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECT
T ss_pred cccccCHHHHhCCCcccccccCCccccccCH
Confidence 9997777778999999999999999996444
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=2.1e-10 Score=118.16 Aligned_cols=114 Identities=19% Similarity=0.211 Sum_probs=100.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..+++++|.+++..+..+..+++|+.|+|++|++.+..|..+.++++|+.|++++|++++..|..+.++++|++||+
T Consensus 129 ~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l 208 (284)
T d1ozna_ 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208 (284)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccc
Confidence 35778999999998755566788999999999999999877888899999999999999999988999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++..|..+..+.+|+.|+|++|.+++..+
T Consensus 209 ~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 209 FANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cccccccccccccccccccCEEEecCCCCCCCcc
Confidence 9999998888888999999999999999887643
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=1.3e-09 Score=101.76 Aligned_cols=110 Identities=17% Similarity=0.099 Sum_probs=89.9
Q ss_pred CCCceeeEEeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCc-CcccCchhhcCCCCCCEeeccCCcCcccCCc
Q 004124 157 NPCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGELKELEILDLGFNNFSGPFPS 235 (772)
Q Consensus 157 ~~C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~-l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~ 235 (772)
.|+.+++|.|.+ +++. .+|..+..+++|+.|+|++|+ ++.--+..+.++++|+.|+|++|+++.--|.
T Consensus 6 ~c~~~~~l~c~~----------~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~ 74 (156)
T d2ifga3 6 CPHGSSGLRCTR----------DGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (156)
T ss_dssp CCSSSSCEECCS----------SCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred CcCCCCeEEecC----------CCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccc
Confidence 455688888853 2222 356778889999999998775 7654456789999999999999999976677
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 236 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
.+..+++|++|+|++|+++ .+|..+.....|+.|+|++|.|.
T Consensus 75 ~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 75 AFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp GGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred cccccccccceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence 7999999999999999998 78877766668999999999886
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=2.1e-09 Score=110.40 Aligned_cols=114 Identities=19% Similarity=0.152 Sum_probs=90.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
++..|+|++|.+.+..+..+..++.|+.+++++|.+++..+..+..+++|+.|+|++|++++-.|..+.++++|+.++++
T Consensus 106 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (284)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred cCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhh
Confidence 46678888888776666667778888888888888886556667788888888888888887667777888888888888
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++++-.|..+..+++|++|++++|.+++..|.
T Consensus 186 ~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~ 219 (284)
T d1ozna_ 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (284)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred hccccccChhHhhhhhhccccccccccccccccc
Confidence 8888887788888888888888888888875544
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=2.5e-09 Score=108.83 Aligned_cols=112 Identities=21% Similarity=0.105 Sum_probs=61.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.+.+ +++.+..+++|++|++++|.+.+..+..+..+.+|+.|++++|.+++-.|..+..+++|+.|+++
T Consensus 78 ~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~ 156 (266)
T d1p9ag_ 78 VLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (266)
T ss_dssp TCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cccccccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccc
Confidence 45556666665554 24445555566666666665555444445555555555555555554333344455555555555
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++++-.|..+..+++|+.|+|++|.++ .+|.
T Consensus 157 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~ 189 (266)
T d1p9ag_ 157 NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK 189 (266)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred cccccccCccccccccccceeecccCCCc-ccCh
Confidence 55555544444555555555555555555 4544
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=6.2e-09 Score=105.86 Aligned_cols=107 Identities=22% Similarity=0.219 Sum_probs=57.0
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
++..|+|++|.|+. +|. ++.+++|++|+|++|.+.+ +|..+.++++|+.|++++|.+.+-.+..+..+.+|+.|+++
T Consensus 56 ~L~~L~L~~N~l~~-l~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~ 132 (266)
T d1p9ag_ 56 RLTQLNLDRAELTK-LQV-DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (266)
T ss_dssp TCCEEECTTSCCCE-EEC-CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred cccccccccccccc-ccc-ccccccccccccccccccc-cccccccccccccccccccccceeecccccccccccccccc
Confidence 45555555555542 332 3455555555555555553 34445555555555555555555444445555555555555
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|.+++-.+..+..++.|+.|++++|.+++
T Consensus 133 ~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccceeccccccccccchhcccccccccc
Confidence 555554333344455555555555555554
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=2.2e-09 Score=100.90 Aligned_cols=106 Identities=20% Similarity=0.153 Sum_probs=85.7
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
++..|+|++|.++. |+.....+++|+.|+|++|.++ .++ .+..+++|+.|+|++|.++.--+..+..+++|+.|+++
T Consensus 19 ~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 46789999999866 5655577899999999999998 454 47889999999999999986333334678999999999
Q ss_pred cCCCcccCC--hhhcCCCCCCEEEcCCCCCCC
Q 004124 250 NNQYLGGIS--PELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP--~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|+++. ++ ..+..+++|+.|++++|.++.
T Consensus 96 ~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 96 NNSLVE-LGDLDPLASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp SCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred cccccc-cccccccccccccchhhcCCCcccc
Confidence 999864 33 357889999999999998763
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.81 E-value=4.1e-09 Score=94.24 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=71.8
Q ss_pred CEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCC
Q 004124 196 KSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDES 275 (772)
Q Consensus 196 ~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N 275 (772)
++|+|++|+++ .+| .+..+++|++||+++|.++ .+|+.++.+++|+.|++++|.+++ +| .+..+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57999999998 566 4899999999999999998 689899999999999999999985 55 5999999999999999
Q ss_pred CCCC
Q 004124 276 WLTN 279 (772)
Q Consensus 276 ~l~g 279 (772)
.++.
T Consensus 76 ~i~~ 79 (124)
T d1dcea3 76 RLQQ 79 (124)
T ss_dssp CCCS
T ss_pred ccCC
Confidence 9985
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.71 E-value=1.9e-08 Score=104.11 Aligned_cols=109 Identities=20% Similarity=0.246 Sum_probs=88.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..++++++++.- +|.. .+++|+.|++++|...+.+|..+.+++.+++|++++|.+++-.|..+.++++|++|+|+
T Consensus 151 ~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~ 227 (305)
T d1xkua_ 151 KLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 227 (305)
T ss_dssp TCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECC
T ss_pred ccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecc
Confidence 56678888887653 4443 36788899999998888888888888899999999998888777788888899999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|.++ .||..+..+++|++|+|++|.++ .++.
T Consensus 228 ~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~ 259 (305)
T d1xkua_ 228 NNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGS 259 (305)
T ss_dssp SSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCT
T ss_pred ccccc-ccccccccccCCCEEECCCCccC-ccCh
Confidence 99887 67888888899999999998888 3443
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.69 E-value=1.9e-08 Score=103.97 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=60.9
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.++|++|...+.++..+..++.++.|++++|.+.+..|..+.++++|++|+|++|.++ .||..+.++++|++|+|+
T Consensus 172 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls 250 (305)
T d1xkua_ 172 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 250 (305)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred ccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECC
Confidence 4555666666666655555666666666666666666555555566666666666666665 455556666666666666
Q ss_pred cCCCcccCChh-------hcCCCCCCEEEcCCCCC
Q 004124 250 NNQYLGGISPE-------LHVLKVISEIQVDESWL 277 (772)
Q Consensus 250 ~N~~~G~iP~~-------~~~l~~L~~l~l~~N~l 277 (772)
+|+++ .|+.. ...+..|+.|+|++|.+
T Consensus 251 ~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 251 NNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp SSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred CCccC-ccChhhccCcchhcccCCCCEEECCCCcC
Confidence 66654 33321 22345556666666655
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=1.6e-08 Score=94.71 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=76.7
Q ss_pred hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCC
Q 004124 187 PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKV 266 (772)
Q Consensus 187 ~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~ 266 (772)
+.+.+...|++|+|++|.++ .||.....+++|+.||||+|.++ .++ .+..+++|++|++++|.++.--+..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 34667889999999999997 46776678999999999999998 564 5889999999999999998644444567999
Q ss_pred CCEEEcCCCCCCC
Q 004124 267 ISEIQVDESWLTN 279 (772)
Q Consensus 267 L~~l~l~~N~l~g 279 (772)
|+.|++++|.++.
T Consensus 89 L~~L~L~~N~i~~ 101 (162)
T d1a9na_ 89 LTELILTNNSLVE 101 (162)
T ss_dssp CCEEECCSCCCCC
T ss_pred cccceeccccccc
Confidence 9999999999974
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.53 E-value=7.7e-08 Score=102.07 Aligned_cols=106 Identities=25% Similarity=0.283 Sum_probs=88.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.++++++.+.+.. .+..++.++.++++.|.+.+ +..+..+++++.|++++|++++-. .+..+++|+.|++
T Consensus 263 ~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L 336 (384)
T d2omza2 263 TKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFF 336 (384)
T ss_dssp TTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEEC
T ss_pred ccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEEC
Confidence 35788999999988743 37788999999999999987 335788899999999999999743 3788999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++ +| .+..+++|+.|++++|.+++-.|
T Consensus 337 ~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 337 ANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp CSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG
T ss_pred CCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh
Confidence 9999875 44 68899999999999999997655
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.48 E-value=1.6e-07 Score=99.55 Aligned_cols=106 Identities=26% Similarity=0.272 Sum_probs=79.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCC---------------
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP--------------- 234 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP--------------- 234 (772)
.+..+++++|.+.. + +.+..+++|+.|++++|.+++..| ++.+++|+.|++++|.+++-.|
T Consensus 220 ~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~n 295 (384)
T d2omza2 220 NLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 295 (384)
T ss_dssp TCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCCcccccccccccccccc
Confidence 56677888877765 2 356777788888888887776443 6677777777777777665322
Q ss_pred -----cccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004124 235 -----SDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 235 -----~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
..+..+++++.|++++|++++- + .+..+++|+.|++++|.+++ ++
T Consensus 296 ~l~~~~~~~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~~n~l~~-l~ 345 (384)
T d2omza2 296 QLEDISPISNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFANNKVSD-VS 345 (384)
T ss_dssp CCSCCGGGGGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECCSSCCCC-CG
T ss_pred ccccccccchhcccCeEECCCCCCCCC-c-ccccCCCCCEEECCCCCCCC-Ch
Confidence 2356678899999999999874 3 38899999999999999986 44
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.45 E-value=1.7e-07 Score=86.92 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=72.9
Q ss_pred CcEEEEEecCCC-CcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004124 169 GKVVILNLRDLC-LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++++ +..--+..+.++++|+.|+|++|.++.--|..+..+++|+.|||++|+++ .+|..+....+|+.|+
T Consensus 31 ~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~ 109 (156)
T d2ifga3 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELV 109 (156)
T ss_dssp SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEE
T ss_pred cccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhccccccccc
Confidence 467899998775 66544556899999999999999999877888999999999999999999 6887766666899999
Q ss_pred CccCCCc
Q 004124 248 LDNNQYL 254 (772)
Q Consensus 248 l~~N~~~ 254 (772)
|++|.|.
T Consensus 110 L~~Np~~ 116 (156)
T d2ifga3 110 LSGNPLH 116 (156)
T ss_dssp CCSSCCC
T ss_pred cCCCccc
Confidence 9999885
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.44 E-value=3.6e-07 Score=88.18 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=74.2
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|+++++.. + +.+..+++|++|+|++|.+++.-| ++++++|+.|++++|.+.. +| .+.+++.|+.|+++
T Consensus 41 ~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 41 QVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLF 114 (199)
T ss_dssp TCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECC
T ss_pred CCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccccccc
Confidence 46677887777653 3 246778888888888888876433 7788888888888887764 44 37778888888888
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|.+... ..+..+++|+.|++++|.++.
T Consensus 115 ~~~~~~~--~~~~~l~~L~~L~l~~n~l~~ 142 (199)
T d2omxa2 115 NNQITDI--DPLKNLTNLNRLELSSNTISD 142 (199)
T ss_dssp SSCCCCC--GGGTTCTTCSEEECCSSCCCC
T ss_pred ccccccc--cccchhhhhHHhhhhhhhhcc
Confidence 8776652 346778888888888887764
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.42 E-value=4.4e-07 Score=88.38 Aligned_cols=101 Identities=23% Similarity=0.310 Sum_probs=45.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+++ ++ .++.+++|++|++++|.+++ +| .+..+++|+.|++++|.+.. + ..+..++.|+.++++
T Consensus 69 ~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~ 142 (210)
T d1h6ta2 69 NVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (210)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-cccccccccccccccccccc-c-ccccccccccccccc
Confidence 34445555555444 22 23445555555555555443 33 24445555555555554432 1 234444444455554
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
+|.+++ +..+..+++|+.+++++|.++
T Consensus 143 ~n~l~~--~~~~~~l~~L~~l~l~~n~l~ 169 (210)
T d1h6ta2 143 NNKITD--ITVLSRLTKLDTLSLEDNQIS 169 (210)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred cccccc--ccccccccccccccccccccc
Confidence 444433 223444445555555555444
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.41 E-value=5.2e-07 Score=87.82 Aligned_cols=104 Identities=17% Similarity=0.227 Sum_probs=88.1
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+++++.+.+. + .+..+++|++|+|++|.+++ ++ .++.+++|++|++++|++++ +| .+.++++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-cccccccccccccc
Confidence 467889999888763 2 48889999999999999987 55 37899999999999999986 65 58899999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+|.+.. + +.+..+..++.++++.|.+++..
T Consensus 121 ~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~~ 150 (210)
T d1h6ta2 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDIT 150 (210)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCCG
T ss_pred cccccc-c-ccccccccccccccccccccccc
Confidence 998753 3 46889999999999999998643
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=98.41 E-value=4.9e-07 Score=87.20 Aligned_cols=104 Identities=23% Similarity=0.321 Sum_probs=87.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++. ++ ++.+++|++|++++|.+.. +| .+.+++.|+.|++++|.+... ..+..+++|+.|++
T Consensus 62 ~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l 135 (199)
T d2omxa2 62 NNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLEL 135 (199)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred CCcCcCccccccccCc-cc-ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhhh
Confidence 4688999999999874 33 8999999999999998864 45 488999999999999988763 34788999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++.. + +.+..+++|+.|++++|.+++-
T Consensus 136 ~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l 165 (199)
T d2omxa2 136 SSNTISD-I-SALSGLTSLQQLNFSSNQVTDL 165 (199)
T ss_dssp CSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC
T ss_pred hhhhhcc-c-ccccccccccccccccccccCC
Confidence 9999864 4 4688899999999999999863
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=5.5e-07 Score=89.26 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=74.0
Q ss_pred CceeeEEeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc-cc
Q 004124 159 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS-DF 237 (772)
Q Consensus 159 C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~-~l 237 (772)
|.+..|.|.+ .+|. .+|+.+. +++++|+|++|.++.--+..+.++++|++|+|++|.+...+|. .+
T Consensus 8 C~~~~i~c~~----------~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f 74 (242)
T d1xwdc1 8 CSNRVFLCQE----------SKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 74 (242)
T ss_dssp ECSSEEEEES----------CSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSE
T ss_pred CcCCEEEEeC----------CCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccc
Confidence 5666677743 3344 4555442 4678888888888643333567788888888888888776654 45
Q ss_pred CCCCCCCEEECcc-CCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 238 GNSFSLTTLLLDN-NQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 238 ~~l~~L~~L~l~~-N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+++.++.+++.. |++....+..+..+++|+.|++++|.++.
T Consensus 75 ~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~ 117 (242)
T d1xwdc1 75 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 117 (242)
T ss_dssp ESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCS
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhcc
Confidence 6777888877654 56666666667778888888888887764
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.27 E-value=9.5e-09 Score=99.73 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=45.6
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..|+|++|.++ .|+ .+..|++|++|+|++|.++ .||.....+++|+.|++++|.++. ++ .+..+++|+.|++++
T Consensus 50 L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~L~~ 124 (198)
T d1m9la_ 50 CKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSN 124 (198)
T ss_dssp CCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEEESE
T ss_pred cceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccccccccccccc
Confidence 444555544444 232 2444455555555555443 334333333445555555555442 21 244444555555555
Q ss_pred CCCcccCC--hhhcCCCCCCEEEcCCCCCC
Q 004124 251 NQYLGGIS--PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 251 N~~~G~iP--~~~~~l~~L~~l~l~~N~l~ 278 (772)
|+++. ++ ..+..+++|+.|+|++|.++
T Consensus 125 N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 125 NKITN-WGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp EECCC-HHHHHHHTTTTTCSEEEECSSHHH
T ss_pred chhcc-ccccccccCCCccceeecCCCccc
Confidence 54432 11 23444555555555555433
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.27 E-value=6.9e-07 Score=87.89 Aligned_cols=102 Identities=25% Similarity=0.343 Sum_probs=57.4
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..++++++...+. ..+...+.+..+.++++.+.+..+ +.++++|+.|++++|.+++.. .++++++|+.|+|+
T Consensus 108 ~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls 181 (227)
T d1h6ua2 108 SIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKAD 181 (227)
T ss_dssp TCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECC
T ss_pred ccccccccccccccc--chhccccchhhhhchhhhhchhhh--hccccccccccccccccccch--hhcccccceecccC
Confidence 344555655554442 224455566666666666554332 455666666666666665432 25566666666666
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++++ +| .+..+++|++|+|++|.+++
T Consensus 182 ~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~ 209 (227)
T d1h6ua2 182 DNKISD-IS-PLASLPNLIEVHLKNNQISD 209 (227)
T ss_dssp SSCCCC-CG-GGGGCTTCCEEECTTSCCCB
T ss_pred CCccCC-Ch-hhcCCCCCCEEECcCCcCCC
Confidence 666654 33 25666666666666666664
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.20 E-value=2.2e-08 Score=97.11 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=77.5
Q ss_pred CchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCC
Q 004124 185 LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVL 264 (772)
Q Consensus 185 ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l 264 (772)
++.++..|++|++|+|++|.++ .|+ .+..|++|+.|+|++|.++ .+|.....+++|+.|++++|+++. + +.+..+
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHH
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccc
Confidence 4567999999999999999998 566 5899999999999999997 577655566789999999999875 4 458889
Q ss_pred CCCCEEEcCCCCCCC
Q 004124 265 KVISEIQVDESWLTN 279 (772)
Q Consensus 265 ~~L~~l~l~~N~l~g 279 (772)
++|+.|+|++|.++.
T Consensus 115 ~~L~~L~L~~N~i~~ 129 (198)
T d1m9la_ 115 VNLRVLYMSNNKITN 129 (198)
T ss_dssp HHSSEEEESEEECCC
T ss_pred ccccccccccchhcc
Confidence 999999999999985
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.10 E-value=5.3e-06 Score=81.29 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=37.8
Q ss_pred hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCC
Q 004124 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVIS 268 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~ 268 (772)
+...++|++|++++|.+.+..+ ++++++|+.|||++|.+++ +| .++++++|++|+|++|++++ +| .+.++++|+
T Consensus 147 ~~~~~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~-i~-~l~~l~~L~ 220 (227)
T d1h6ua2 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD-VS-PLANTSNLF 220 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCB-CG-GGTTCTTCC
T ss_pred hccccccccccccccccccchh--hcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCC-Cc-ccccCCCCC
Confidence 3444455555555555443221 4455555555555555543 22 24455555555555555442 33 244555555
Q ss_pred EEEcC
Q 004124 269 EIQVD 273 (772)
Q Consensus 269 ~l~l~ 273 (772)
.|+++
T Consensus 221 ~L~ls 225 (227)
T d1h6ua2 221 IVTLT 225 (227)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 55543
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.07 E-value=2.9e-06 Score=88.04 Aligned_cols=98 Identities=24% Similarity=0.267 Sum_probs=79.2
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++++|+ .+|+. +++|++|+|++|+++ .||..+ .+|+.|++++|+++ .|+. + .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C--CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h--cccccccccc
Confidence 4668999999997 48853 578999999999998 788654 57889999999887 3442 1 1369999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004124 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+|.+. .+|. .+.+++|+.|++++|.+++..
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~ 136 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLP 136 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCC
T ss_pred ccccc-cccc-hhhhccceeeccccccccccc
Confidence 99987 5774 688999999999999987543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.89 E-value=3.3e-05 Score=76.91 Aligned_cols=147 Identities=13% Similarity=0.155 Sum_probs=87.5
Q ss_pred HHHHHhhcccccccccCccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEE
Q 004124 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCE 549 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fG~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~ 549 (772)
|+.+..+.+ ++....+-++.+.||+.... +..+++|+........ ...+.+|...+..+. +--+-+++.+..
T Consensus 8 ~l~~~~~~~-~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~-----~~~~~~E~~~l~~l~~~vpvP~vl~~~~ 80 (263)
T d1j7la_ 8 ELKKLIEKY-RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFER 80 (263)
T ss_dssp HHHHHHTTS-EEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEE
T ss_pred HHHHhhhce-EEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccc-----hhhHHHHHHHHHHHhccCCCCcEEEEEe
Confidence 555555555 33333222334689998754 4556777664332211 124667777777663 333567777777
Q ss_pred cCCCceEEEEEeccCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------
Q 004124 550 EDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL--------------------------- 602 (772)
Q Consensus 550 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~--------------------------- 602 (772)
.++ ..++||+++++..+.+.... ... ...++.++++.++.||+.
T Consensus 81 ~~~--~~~lv~~~l~G~~~~~~~~~----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T d1j7la_ 81 HDG--WSNLLMSEADGVLCSEEYED----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp ETT--EEEEEEECCSSEEHHHHTTT----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred cCC--ceEEEEEecccccccccccc----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhh
Confidence 665 67999999998777543311 001 122333344444444421
Q ss_pred ------------------------------CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 603 ------------------------------TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 ------------------------------~~~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
.+.++|+|+.|.|||++++...-|.||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1127899999999999987777799998643
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=9.4e-06 Score=79.99 Aligned_cols=109 Identities=18% Similarity=0.160 Sum_probs=84.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeecc-CCcCcccCCcccCCCCCCCEEE
Q 004124 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLG-FNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls-~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.++.|+|++|.+..-.+..+.++++|++|+|++|.+...+|. .+.++++++.|++. .|++....|..+.++++|++|+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 467999999999763344588999999999999999887765 57789999999986 4788877777889999999999
Q ss_pred CccCCCcccCC-hhhcCCCCCCEEEcCCCCCC
Q 004124 248 LDNNQYLGGIS-PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~ 278 (772)
+++|.+...-+ ..+..++.+..+..+++.++
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~ 141 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 141 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCC
T ss_pred cchhhhcccccccccccccccccccccccccc
Confidence 99999864322 23445566666666666554
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=2.6e-06 Score=91.71 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=87.1
Q ss_pred cEEEEEecCCCCccc-CchhhcCCCCCCEEEcccCcCc----ccCchhhcCCCCCCEeeccCCcCccc----CCcccC-C
Q 004124 170 KVVILNLRDLCLGGM-LAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGP----FPSDFG-N 239 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~-ip~~l~~l~~L~~L~L~~N~l~----G~iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l~-~ 239 (772)
.+..||++++++++. +..-+..+++|+.|+|++|.++ ..|...+..+++|+.|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 578999999999874 2334566789999999999987 34677788999999999999998631 223332 2
Q ss_pred CCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCC
Q 004124 240 SFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 240 l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
..+|++|+|++|+++.. ++..+..+++|++|+|++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 35799999999998753 56677889999999999998874
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.53 E-value=1.3e-05 Score=74.32 Aligned_cols=68 Identities=25% Similarity=0.319 Sum_probs=35.9
Q ss_pred cCCCCCCEEEcccCcCccc--CchhhcCCCCCCEeeccCCcCcccCCc-ccCCCCCCCEEECccCCCcccCC
Q 004124 190 GQLSELKSIILRNNSFFGT--IPKEIGELKELEILDLGFNNFSGPFPS-DFGNSFSLTTLLLDNNQYLGGIS 258 (772)
Q Consensus 190 ~~l~~L~~L~L~~N~l~G~--iP~~l~~l~~L~~L~ls~N~l~G~iP~-~l~~l~~L~~L~l~~N~~~G~iP 258 (772)
..++.|++|+|++|.++.- ++..+..+++|+.|||++|.++. ++. .......|+.|++++|.+++...
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~~~ 132 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSDTFR 132 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSSSS
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCcCcc
Confidence 3456666666666666532 33445556666666666666653 221 11222345666666666655443
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=2.2e-05 Score=79.74 Aligned_cols=56 Identities=21% Similarity=0.272 Sum_probs=26.3
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccC-cCccc-CchhhcCCCCCCEeeccC
Q 004124 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNN-SFFGT-IPKEIGELKELEILDLGF 226 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N-~l~G~-iP~~l~~l~~L~~L~ls~ 226 (772)
++.|+|+++.+++..+..++.+++|++|+|+++ .++.. +..-..+|++|++|++++
T Consensus 73 L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~ 130 (284)
T d2astb2 73 LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 130 (284)
T ss_dssp CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred cccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccccccc
Confidence 445555555555544455555555555555552 33321 222223445555555554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.49 E-value=1.7e-05 Score=82.66 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=78.7
Q ss_pred CcEEEEEecCCCCccc-----CchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCcccCCcc---
Q 004124 169 GKVVILNLRDLCLGGM-----LAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGPFPSD--- 236 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~-----ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP~~--- 236 (772)
..+..|+|+.|.++.. +...+..++.|+.|+|++|.++.. +...+..+++|+.|+|++|.+++.-...
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~ 265 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 265 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHH
Confidence 4577888888887632 334567788899999999888643 5566778888999999999887642222
Q ss_pred -cC--CCCCCCEEECccCCCccc----CChhhc-CCCCCCEEEcCCCCCCC
Q 004124 237 -FG--NSFSLTTLLLDNNQYLGG----ISPELH-VLKVISEIQVDESWLTN 279 (772)
Q Consensus 237 -l~--~l~~L~~L~l~~N~~~G~----iP~~~~-~l~~L~~l~l~~N~l~g 279 (772)
+. ....|++|++++|+++.. +...+. +++.|+.|+|++|.|+.
T Consensus 266 ~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 22 235788999999987642 333342 56788999999998864
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.46 E-value=0.00015 Score=71.62 Aligned_cols=68 Identities=10% Similarity=0.155 Sum_probs=46.7
Q ss_pred EEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCC--CcccceeEEEEcCCCceEEEEEeccCCCChh
Q 004124 492 GTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLF 569 (772)
Q Consensus 492 G~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~ 569 (772)
+.||+...+++..+++|....... ..+..|+..++.+.. -.+.++++++.+++ ..++||||+++-++.
T Consensus 25 ~~v~r~~~~~~~~~vlK~~~~~~~--------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~--~~~~v~~~i~G~~~~ 94 (255)
T d1nd4a_ 25 AAVFRLSAQGRPVLFVKTDLSGAL--------NELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPGQDLL 94 (255)
T ss_dssp CEEEEEECTTSCCEEEEEECSCTT--------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSSEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCccCH--------hHHHHHHHHHHHHHhcCCCCCceeeeccccc--ceEEEEEeeeccccc
Confidence 579999988888888886543221 235677777776632 33566777777665 579999999876653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=1.9e-05 Score=84.59 Aligned_cols=112 Identities=19% Similarity=0.181 Sum_probs=79.7
Q ss_pred CcEEEEEecCCCCcccCchhh----c-CCCCCCEEEcccCcCcccCc----hhhcCCCCCCEeeccCCcCccc----CCc
Q 004124 169 GKVVILNLRDLCLGGMLAPEL----G-QLSELKSIILRNNSFFGTIP----KEIGELKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l----~-~l~~L~~L~L~~N~l~G~iP----~~l~~l~~L~~L~ls~N~l~G~----iP~ 235 (772)
..+..+++++|.+++.-...+ . ....|+.+++++|.++..-. ..+..+.+|+.|||++|.++.. ++.
T Consensus 283 ~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~ 362 (460)
T d1z7xw1 283 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 362 (460)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhh
Confidence 457788888888865322222 2 34678999999998876532 3344567899999999988753 444
Q ss_pred ccC-CCCCCCEEECccCCCcc----cCChhhcCCCCCCEEEcCCCCCCCc
Q 004124 236 DFG-NSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 236 ~l~-~l~~L~~L~l~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
.+. ..+.|++|+|++|+++. .|+..+..+++|++|+|++|.++..
T Consensus 363 ~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 363 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 412 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred hhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHH
Confidence 443 45679999999998874 3555667788999999999998854
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=97.39 E-value=0.00026 Score=72.74 Aligned_cols=95 Identities=22% Similarity=0.178 Sum_probs=69.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004124 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|+|+ .+|.. +.+|+.|++++|.++ .|+. + .+.|++||+++|.+. .+|. ++++++|+.|++
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l 127 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDV 127 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh-h--ccccccccccccccc-cccc-hhhhccceeecc
Confidence 35789999999998 67764 457899999999987 3442 1 246999999999998 5774 688999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCC
Q 004124 249 DNNQYLGGISPELHVLKVISEIQVDESWL 277 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l 277 (772)
++|.+.+..+ . ...+..+.+..+..
T Consensus 128 ~~~~~~~~~~-~---~~~l~~l~~~~~~~ 152 (353)
T d1jl5a_ 128 DNNSLKKLPD-L---PPSLEFIAAGNNQL 152 (353)
T ss_dssp CSSCCSCCCC-C---CTTCCEEECCSSCC
T ss_pred cccccccccc-c---cccccchhhccccc
Confidence 9998765332 1 23444455544433
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.27 E-value=4.5e-05 Score=79.32 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=71.9
Q ss_pred EEEEEecCCCCcc----cCchhhcCCCCCCEEEcccCcCccc-----CchhhcCCCCCCEeeccCCcCccc----CCccc
Q 004124 171 VVILNLRDLCLGG----MLAPELGQLSELKSIILRNNSFFGT-----IPKEIGELKELEILDLGFNNFSGP----FPSDF 237 (772)
Q Consensus 171 v~~l~L~~~~l~G----~ip~~l~~l~~L~~L~L~~N~l~G~-----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l 237 (772)
+..++++++.++. .+...+.....|+.|+|++|.++.. +...+..+++|+.|+|++|.++.. +...+
T Consensus 160 L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l 239 (344)
T d2ca6a1 160 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239 (344)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred cceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccc
Confidence 4566777776652 2344456677888888888887632 334466778888888888887542 44456
Q ss_pred CCCCCCCEEECccCCCcccCChhh----c--CCCCCCEEEcCCCCCCC
Q 004124 238 GNSFSLTTLLLDNNQYLGGISPEL----H--VLKVISEIQVDESWLTN 279 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~iP~~~----~--~l~~L~~l~l~~N~l~g 279 (772)
..+++|++|+|++|.+++.-...+ . ....|+.|++++|.++.
T Consensus 240 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 240 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred cccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 677888888888888765422222 2 23568888888887764
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.25 E-value=5.3e-05 Score=76.76 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=57.5
Q ss_pred cEEEEEecCCCCccc-CchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC-CcCccc-CCcccCCCCCCCEE
Q 004124 170 KVVILNLRDLCLGGM-LAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF-NNFSGP-FPSDFGNSFSLTTL 246 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~-ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~-N~l~G~-iP~~l~~l~~L~~L 246 (772)
++..++|+++.+++. +..-+..+++|++|+|+++.+++..+..++++++|+.|+|++ +.++.. +..-..++++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 455666666655543 233345666677777777766666666666666777777766 344421 22223345667777
Q ss_pred ECccC-CCcc-cCChhhcC-CCCCCEEEcCC
Q 004124 247 LLDNN-QYLG-GISPELHV-LKVISEIQVDE 274 (772)
Q Consensus 247 ~l~~N-~~~G-~iP~~~~~-l~~L~~l~l~~ 274 (772)
+++++ .++. .++..+.. .+.|+.|++++
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~ 157 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSG 157 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred ccccccccccccchhhhcccccccchhhhcc
Confidence 76653 3332 12222222 35666666654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.20 E-value=0.0005 Score=72.71 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=45.6
Q ss_pred ccccCccceEEEEEEEEcC-CcEEEEEEeeecccc---hhhhhHHHHHHHHHHHHhcC-CC--CcccceeEEEEcCCCce
Q 004124 483 IGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRA---DWSKNLESQFRKKIDTLSKV-NH--KNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~-~~~vaVK~~~~~~~~---~~~~~~~~~f~~Ei~~L~~l-~H--pNIV~l~g~~~~~~~~~ 555 (772)
...+|.|....||+....+ ++.++||.-....+. .+.. ...+...|.+.|..+ .+ ..+.+++.+.. + .
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~-~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~--~ 105 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPL-TIDRARIESSALIRQGEHVPHLVPRVFYSDT--E--M 105 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCC-CTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T--T
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCC-CHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--C--C
Confidence 3467889999999998654 567888864321111 1110 112344677777655 22 34556665543 2 2
Q ss_pred EEEEEeccCCCC
Q 004124 556 RMMVFEYSPNGS 567 (772)
Q Consensus 556 ~~LV~Ey~~~Gs 567 (772)
.++||||+++..
T Consensus 106 ~~lvmE~L~~~~ 117 (392)
T d2pula1 106 AVTVMEDLSHLK 117 (392)
T ss_dssp TEEEECCCTTSE
T ss_pred CEEEEeccCCcc
Confidence 379999997644
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=2.1e-05 Score=72.75 Aligned_cols=92 Identities=17% Similarity=0.083 Sum_probs=65.3
Q ss_pred hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEECccCCCcccCCh-hhcCC
Q 004124 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISP-ELHVL 264 (772)
Q Consensus 188 ~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l~~N~~~G~iP~-~~~~l 264 (772)
.+..+..+..+++.+| +...++.....+++|++||||+|+++. .++..+..+++|+.|+|++|.++. +++ .....
T Consensus 37 ~l~~~~~~~~l~~~~~-~~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~ 114 (162)
T d1koha1 37 DLVAQNIDVVLNRRSS-MAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKG 114 (162)
T ss_dssp TTTTTTCCCCTTSHHH-HHHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTT
T ss_pred hhhhccchhhcchhhh-HhhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhc
Confidence 3444555555555444 334455555679999999999999986 244556789999999999999874 332 33344
Q ss_pred CCCCEEEcCCCCCCCcc
Q 004124 265 KVISEIQVDESWLTNAA 281 (772)
Q Consensus 265 ~~L~~l~l~~N~l~g~~ 281 (772)
..|+.|++++|.++...
T Consensus 115 ~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 115 LKLEELWLDGNSLSDTF 131 (162)
T ss_dssp CCCSSCCCTTSTTSSSS
T ss_pred cccceeecCCCCcCcCc
Confidence 57899999999998654
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.75 E-value=0.00042 Score=63.97 Aligned_cols=108 Identities=10% Similarity=0.084 Sum_probs=73.0
Q ss_pred CcEEEEEecCC-CCccc----CchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCcccC----Cc
Q 004124 169 GKVVILNLRDL-CLGGM----LAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGPF----PS 235 (772)
Q Consensus 169 ~~v~~l~L~~~-~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~i----P~ 235 (772)
..++.|+|+++ .++.. +-..+...+.|++|+|++|.+... +-..+...+.|+.|+|++|.++..- -.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 45778888864 45432 344567778899999999988633 3334556788999999999887532 23
Q ss_pred ccCCCCCCCEEECccCCCcc-------cCChhhcCCCCCCEEEcCCCC
Q 004124 236 DFGNSFSLTTLLLDNNQYLG-------GISPELHVLKVISEIQVDESW 276 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G-------~iP~~~~~l~~L~~l~l~~N~ 276 (772)
.+...++|++|+|++|.+.. .|-..+...+.|+.|+++.+.
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 45667789999998886432 133445557788888886653
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.90 E-value=0.0024 Score=58.57 Aligned_cols=89 Identities=18% Similarity=0.137 Sum_probs=66.3
Q ss_pred cCCCCCCEEEcccC-cCccc----CchhhcCCCCCCEeeccCCcCcccCC----cccCCCCCCCEEECccCCCccc----
Q 004124 190 GQLSELKSIILRNN-SFFGT----IPKEIGELKELEILDLGFNNFSGPFP----SDFGNSFSLTTLLLDNNQYLGG---- 256 (772)
Q Consensus 190 ~~l~~L~~L~L~~N-~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP----~~l~~l~~L~~L~l~~N~~~G~---- 256 (772)
.+.+.|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+...-. ..+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45689999999974 56533 33457788999999999999874322 2344568899999999998753
Q ss_pred CChhhcCCCCCCEEEcCCCCCC
Q 004124 257 ISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 257 iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
+-..+...+.|+.|+|++|..+
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2234666788999999988665
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.52 E-value=0.02 Score=58.09 Aligned_cols=68 Identities=12% Similarity=0.051 Sum_probs=41.1
Q ss_pred EEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCCCCcc-----cceeE--EEEcCCCceEEEEEeccC
Q 004124 492 GTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-----VNLIG--YCEEDEPFTRMMVFEYSP 564 (772)
Q Consensus 492 G~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNI-----V~l~g--~~~~~~~~~~~LV~Ey~~ 564 (772)
-.||+.+.++|..+++|....... ..+++..|...+..|....| +..-| .....+ ..+.+++|++
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~~------s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~--~~~~l~~~~~ 107 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFAVFPSVG 107 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEEEEECCC
T ss_pred ceeEEEEcCCCCEEEEEEeCCCCC------CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeee--EEEEEEeecC
Confidence 389999999999999988653221 12456777777776642221 11111 112222 4688999997
Q ss_pred CCC
Q 004124 565 NGS 567 (772)
Q Consensus 565 ~Gs 567 (772)
|..
T Consensus 108 G~~ 110 (325)
T d1zyla1 108 GRQ 110 (325)
T ss_dssp CEE
T ss_pred CcC
Confidence 643
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.91 E-value=0.0045 Score=56.48 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=73.7
Q ss_pred CcEEEEEecC-CCCccc----CchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CCc
Q 004124 169 GKVVILNLRD-LCLGGM----LAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~-~~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~ 235 (772)
..++.|+|++ +.++.. +-..+...++|+.|+|++|.++.. |-..+...+.|+.|++++|.+... +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4567888887 445432 344566788999999999988654 223455678899999999888653 224
Q ss_pred ccCCCCCCCEEEC--ccCCCcc----cCChhhcCCCCCCEEEcCCCCC
Q 004124 236 DFGNSFSLTTLLL--DNNQYLG----GISPELHVLKVISEIQVDESWL 277 (772)
Q Consensus 236 ~l~~l~~L~~L~l--~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l 277 (772)
.+...++|+.++| +.|.+.- .|-..+...++|+.|+++.|..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 5666778887655 4566532 2444566788899998876643
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.82 E-value=0.04 Score=57.44 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=44.5
Q ss_pred ccccCccceEEEEEEEEcCC--------cEEEEEEeeecccchhhhhHHHHHHHHHHHHhcCC-CCcccceeEEEEcCCC
Q 004124 483 IGSFSDGTVGTVYKGTLSSG--------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 483 ig~lg~G~fG~Vykg~~~~~--------~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~ 553 (772)
+..++.|-.-.+|+....++ ..+.+++.. .... .....+|..+++.+. +.-..++++++. +
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~------~idr~~E~~i~~~ls~~gl~Pkll~~~~--~- 116 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET------ESHLVAESVIFTLLSERHLGPKLYGIFS--G- 116 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC------HHHHHHHHHHHHHHHHTTSSSCEEEEET--T-
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch------hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C-
Confidence 34566677789999987543 445555543 2111 123457788888774 433347777763 2
Q ss_pred ceEEEEEeccCCCCh
Q 004124 554 FTRMMVFEYSPNGSL 568 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL 568 (772)
.+|+||+++..+
T Consensus 117 ---g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 ---GRLEEYIPSRPL 128 (395)
T ss_dssp ---EEEECCCCEEEC
T ss_pred ---ceEEEEeccccC
Confidence 589999987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.36 E-value=0.073 Score=53.24 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=25.8
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004124 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kLsDFGla~ 633 (772)
++||+|+.+.||+++.+...-|.||+.+.
T Consensus 184 giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 184 GVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccccCCcchhhhhcccccceeEecccccc
Confidence 59999999999999988777899999653
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=91.05 E-value=0.057 Score=48.68 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=63.7
Q ss_pred hcCCCCCCEEEccc-CcCccc----CchhhcCCCCCCEeeccCCcCcccCC----cccCCCCCCCEEECccCCCccc---
Q 004124 189 LGQLSELKSIILRN-NSFFGT----IPKEIGELKELEILDLGFNNFSGPFP----SDFGNSFSLTTLLLDNNQYLGG--- 256 (772)
Q Consensus 189 l~~l~~L~~L~L~~-N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP----~~l~~l~~L~~L~l~~N~~~G~--- 256 (772)
..+.+.|++|+|++ +.++.. +-..+...++|+.|+|++|.++..-- ..+...++|+.+++++|.++..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 35678999999997 557533 33456678999999999998875422 2344568899999999987643
Q ss_pred -CChhhcCCCCCCEEEcC--CCCCC
Q 004124 257 -ISPELHVLKVISEIQVD--ESWLT 278 (772)
Q Consensus 257 -iP~~~~~l~~L~~l~l~--~N~l~ 278 (772)
+-..+...+.|+.++|+ .|.++
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~ 117 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLG 117 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHhCccccEEeeccCCCcCc
Confidence 23456677888886664 45554
|