Query 004127
Match_columns 772
No_of_seqs 463 out of 3337
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:09:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004127.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004127hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 2.1E-32 7.1E-37 286.6 29.4 247 23-311 4-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 8.4E-32 2.9E-36 282.0 30.4 231 201-475 18-273 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 5.5E-32 1.9E-36 284.5 20.7 248 24-311 6-276 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 2E-31 7E-36 280.1 19.7 230 201-474 19-275 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 1.8E-20 6.2E-25 171.8 13.1 124 359-494 9-132 (133)
6 2dmh_A Myoferlin; beta-sandwic 99.8 2.4E-19 8.1E-24 166.0 16.6 123 361-495 5-134 (140)
7 1wfj_A Putative elicitor-respo 99.8 1.2E-19 4.1E-24 167.1 13.5 123 360-495 7-131 (136)
8 2ep6_A MCTP2 protein; beta san 99.8 1.3E-19 4.4E-24 166.1 13.5 124 33-165 6-131 (133)
9 2dmh_A Myoferlin; beta-sandwic 99.8 5.2E-19 1.8E-23 163.7 17.3 124 37-167 4-134 (140)
10 3kwu_A MUNC13-1; calcium bindi 99.8 6E-19 2.1E-23 164.9 17.8 126 362-493 16-146 (148)
11 2fk9_A Protein kinase C, ETA t 99.8 2.1E-19 7.1E-24 167.5 13.0 119 360-493 26-156 (157)
12 3b7y_A E3 ubiquitin-protein li 99.8 4.3E-19 1.5E-23 167.0 14.8 126 359-494 16-153 (153)
13 1wfj_A Putative elicitor-respo 99.8 4.7E-19 1.6E-23 163.1 12.2 125 36-168 6-132 (136)
14 2fk9_A Protein kinase C, ETA t 99.8 5.2E-19 1.8E-23 164.8 12.4 119 36-164 25-155 (157)
15 3m7f_B E3 ubiquitin-protein li 99.8 1.6E-18 5.5E-23 167.0 15.8 126 360-495 5-142 (176)
16 3b7y_A E3 ubiquitin-protein li 99.8 2.6E-18 8.9E-23 161.6 16.7 128 36-165 16-152 (153)
17 3kwu_A MUNC13-1; calcium bindi 99.8 3.3E-18 1.1E-22 159.9 16.9 119 38-165 15-146 (148)
18 1gmi_A Protein kinase C, epsil 99.8 1.2E-18 4.2E-23 160.2 12.5 120 362-496 5-135 (136)
19 1rlw_A Phospholipase A2, CALB 99.8 1.2E-18 4.1E-23 158.1 11.6 117 363-492 3-123 (126)
20 3m7f_B E3 ubiquitin-protein li 99.8 6E-18 2E-22 162.9 16.7 129 37-167 5-142 (176)
21 1gmi_A Protein kinase C, epsil 99.8 2.8E-18 9.6E-23 157.7 12.3 117 38-166 4-133 (136)
22 2nq3_A Itchy homolog E3 ubiqui 99.8 5.8E-18 2E-22 161.6 14.4 127 37-166 33-161 (173)
23 1rlw_A Phospholipase A2, CALB 99.8 5.2E-18 1.8E-22 153.9 13.4 115 39-163 2-122 (126)
24 2b3r_A Phosphatidylinositol-4- 99.8 8.2E-18 2.8E-22 154.0 14.2 116 25-148 7-131 (134)
25 2z0u_A WW domain-containing pr 99.8 1.9E-18 6.4E-23 161.9 9.9 117 24-146 29-154 (155)
26 2bwq_A Regulating synaptic mem 99.7 6.2E-18 2.1E-22 154.0 12.6 115 24-146 4-129 (129)
27 1rsy_A Synaptotagmin I; calciu 99.7 9.7E-18 3.3E-22 157.3 13.9 104 362-474 41-150 (152)
28 1rsy_A Synaptotagmin I; calciu 99.7 1.2E-17 4E-22 156.8 14.1 120 22-148 26-151 (152)
29 2d8k_A Synaptotagmin VII; exoc 99.7 1.3E-17 4.4E-22 154.4 13.9 119 24-149 12-137 (141)
30 2d8k_A Synaptotagmin VII; exoc 99.7 3.4E-17 1.2E-21 151.5 16.7 120 322-475 10-136 (141)
31 3f04_A Synaptotagmin-1; C2A, c 99.7 1.4E-17 4.9E-22 154.6 12.9 117 24-147 20-142 (143)
32 3pyc_A E3 ubiquitin-protein li 99.7 2.2E-17 7.5E-22 151.0 13.8 123 363-492 5-131 (132)
33 1rh8_A Piccolo protein; beta-s 99.7 3.8E-18 1.3E-22 158.3 8.5 117 24-149 6-140 (142)
34 2z0u_A WW domain-containing pr 99.7 8.9E-18 3.1E-22 157.3 11.1 104 361-473 41-154 (155)
35 2nq3_A Itchy homolog E3 ubiqui 99.7 2.9E-17 9.8E-22 156.8 14.7 123 361-494 34-161 (173)
36 1v27_A Regulating synaptic mem 99.7 8.1E-18 2.8E-22 155.9 10.6 119 24-150 7-136 (141)
37 3fdw_A Synaptotagmin-like prot 99.7 6.8E-18 2.3E-22 157.7 10.1 122 322-476 7-136 (148)
38 3f04_A Synaptotagmin-1; C2A, c 99.7 2E-17 6.7E-22 153.6 12.4 105 361-474 32-142 (143)
39 2bwq_A Regulating synaptic mem 99.7 2.7E-17 9.4E-22 149.7 12.7 102 362-473 17-129 (129)
40 1wfm_A Synaptotagmin XIII; C2 99.7 4.9E-17 1.7E-21 149.7 14.3 116 24-149 12-134 (138)
41 3pyc_A E3 ubiquitin-protein li 99.7 5.4E-17 1.8E-21 148.4 14.1 119 39-164 4-131 (132)
42 3rdl_A Protein kinase C alpha 99.7 2.3E-17 7.8E-22 152.0 11.4 116 24-149 4-126 (137)
43 2dmg_A KIAA1228 protein; beta- 99.7 3.8E-17 1.3E-21 151.4 12.9 121 322-475 8-136 (142)
44 3fbk_A RGS3, RGP3, regulator o 99.7 4.2E-17 1.4E-21 153.1 13.3 118 24-149 13-139 (153)
45 3rdl_A Protein kinase C alpha 99.7 5.2E-17 1.8E-21 149.6 13.2 103 363-475 16-125 (137)
46 2b3r_A Phosphatidylinositol-4- 99.7 5.3E-17 1.8E-21 148.6 13.1 104 362-475 19-131 (134)
47 1v27_A Regulating synaptic mem 99.7 4.6E-17 1.6E-21 150.8 12.4 121 322-475 5-134 (141)
48 2q3x_A Regulating synaptic mem 99.7 4.3E-17 1.5E-21 155.9 12.4 104 363-475 30-140 (171)
49 1wfm_A Synaptotagmin XIII; C2 99.7 1.3E-16 4.4E-21 146.9 15.1 102 362-475 25-133 (138)
50 3fdw_A Synaptotagmin-like prot 99.7 1.8E-17 6.2E-22 154.7 9.3 120 24-150 9-137 (148)
51 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.1E-16 3.9E-21 147.4 14.5 105 362-475 21-134 (138)
52 2chd_A Rabphilin-3A, exophilin 99.7 3.6E-17 1.2E-21 151.6 11.2 120 22-148 13-141 (142)
53 1a25_A CALB, protein kinase C 99.7 5.1E-17 1.7E-21 151.9 12.3 116 24-149 19-141 (149)
54 3fbk_A RGS3, RGP3, regulator o 99.7 5.1E-17 1.7E-21 152.5 12.1 105 361-475 25-138 (153)
55 1a25_A CALB, protein kinase C 99.7 8.1E-17 2.8E-21 150.5 13.1 103 363-475 31-140 (149)
56 1rh8_A Piccolo protein; beta-s 99.7 1.7E-17 5.9E-22 153.8 8.3 104 363-475 18-139 (142)
57 2dmg_A KIAA1228 protein; beta- 99.7 5.6E-17 1.9E-21 150.3 11.6 120 23-150 9-138 (142)
58 2q3x_A Regulating synaptic mem 99.7 4.4E-17 1.5E-21 155.8 11.1 116 24-149 18-141 (171)
59 1tjx_A Similar to synaptotagmi 99.7 2.2E-16 7.7E-21 149.2 15.5 120 322-475 9-148 (159)
60 1ugk_A Synaptotagmin IV, KIAA1 99.7 1E-16 3.4E-21 147.8 12.8 120 24-149 8-135 (138)
61 3n5a_A Synaptotagmin-7; calciu 99.7 2.1E-16 7.1E-21 145.7 14.1 103 361-474 14-124 (138)
62 2chd_A Rabphilin-3A, exophilin 99.7 1.1E-16 3.9E-21 148.2 12.2 104 362-474 28-140 (142)
63 2cm5_A Rabphilin-3A; protein t 99.7 3.7E-16 1.3E-20 148.9 15.3 106 322-461 21-134 (166)
64 2enp_A B/K protein; C2 type 1, 99.7 1.1E-16 3.9E-21 149.2 11.2 119 23-148 11-142 (147)
65 1tjx_A Similar to synaptotagmi 99.7 1.8E-16 6.1E-21 149.9 12.3 121 24-149 11-149 (159)
66 2cm5_A Rabphilin-3A; protein t 99.7 2.9E-16 9.8E-21 149.6 13.5 103 24-128 23-133 (166)
67 2enp_A B/K protein; C2 type 1, 99.7 1.9E-16 6.5E-21 147.6 11.9 123 322-475 10-142 (147)
68 3n5a_A Synaptotagmin-7; calciu 99.7 1.7E-16 5.8E-21 146.3 11.1 103 25-129 3-113 (138)
69 1w15_A Synaptotagmin IV; metal 99.7 1E-15 3.5E-20 143.7 15.2 102 362-474 29-138 (153)
70 1w15_A Synaptotagmin IV; metal 99.7 5.2E-16 1.8E-20 145.7 12.4 102 24-127 16-125 (153)
71 3l9b_A Otoferlin; C2-domain, b 99.6 1.7E-15 5.7E-20 134.6 12.4 116 41-167 22-141 (144)
72 2cjt_A UNC-13 homolog A, MUNC1 99.6 4E-15 1.4E-19 135.1 13.0 98 39-146 4-103 (131)
73 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.7E-15 1.6E-19 134.6 12.6 86 362-462 4-90 (131)
74 3l9b_A Otoferlin; C2-domain, b 99.6 8.2E-15 2.8E-19 130.2 13.0 119 363-497 21-143 (144)
75 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.3E-14 4.4E-19 137.2 12.8 117 362-493 13-140 (167)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.9E-14 6.5E-19 136.0 13.3 119 39-165 13-140 (167)
77 3jzy_A Intersectin 2; C2 domai 99.6 1.4E-14 4.8E-19 164.2 13.3 119 360-493 384-507 (510)
78 3nsj_A Perforin-1; pore formin 99.5 3.5E-14 1.2E-18 158.1 16.0 113 360-495 391-505 (540)
79 3jzy_A Intersectin 2; C2 domai 99.5 1.7E-14 5.9E-19 163.4 12.9 122 37-164 384-506 (510)
80 3nsj_A Perforin-1; pore formin 99.5 3.7E-14 1.3E-18 157.9 15.1 112 37-166 391-504 (540)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.9E-13 6.3E-18 156.0 17.1 120 38-165 495-623 (624)
82 3bxj_A RAS GTPase-activating p 99.5 4.9E-15 1.7E-19 164.9 1.0 123 362-495 10-158 (483)
83 1djx_A PLC-D1, phosphoinositid 99.4 5.4E-13 1.8E-17 152.2 15.5 121 361-493 495-623 (624)
84 1cjy_A CPLA2, protein (cytosol 99.4 3.6E-13 1.2E-17 154.5 11.5 107 37-148 15-127 (749)
85 1cjy_A CPLA2, protein (cytosol 99.4 3.4E-13 1.2E-17 154.7 8.5 105 360-474 15-126 (749)
86 3bxj_A RAS GTPase-activating p 99.2 7.4E-13 2.5E-17 147.4 -0.1 100 39-149 10-118 (483)
87 3ohm_B 1-phosphatidylinositol- 99.2 1.4E-10 5E-15 135.1 14.5 112 40-166 725-845 (885)
88 3qr0_A Phospholipase C-beta (P 99.2 2.1E-10 7.1E-15 133.1 15.6 112 40-166 650-771 (816)
89 2zkm_X 1-phosphatidylinositol- 99.1 2.9E-10 9.8E-15 132.9 14.9 111 39-164 677-797 (799)
90 3pfq_A PKC-B, PKC-beta, protei 99.1 6.8E-11 2.3E-15 137.9 9.6 105 39-149 171-282 (674)
91 3pfq_A PKC-B, PKC-beta, protei 99.1 8.7E-11 3E-15 136.9 9.5 103 363-475 172-281 (674)
92 3qr0_A Phospholipase C-beta (P 99.0 1.3E-09 4.6E-14 126.4 14.4 111 362-493 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.0 9.5E-10 3.3E-14 128.2 12.4 123 363-506 725-860 (885)
94 2zkm_X 1-phosphatidylinositol- 98.9 6.6E-09 2.2E-13 121.4 13.5 97 200-311 676-781 (799)
95 1yrk_A NPKC-delta, protein kin 98.8 1.2E-08 4.2E-13 87.7 10.0 114 40-165 6-124 (126)
96 2enj_A NPKC-theta, protein kin 98.8 1.8E-08 6E-13 87.9 8.9 114 40-165 10-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.7 3.3E-07 1.1E-11 78.9 12.9 108 363-492 6-123 (126)
98 2enj_A NPKC-theta, protein kin 98.6 3.3E-07 1.1E-11 79.9 11.3 109 363-492 10-128 (138)
99 2yrb_A Protein fantom; beta sa 93.1 0.28 9.6E-06 44.2 8.0 130 32-167 10-151 (156)
100 3l4c_A Dedicator of cytokinesi 86.6 5.5 0.00019 38.0 11.2 40 73-112 78-119 (220)
101 3hhm_A Phosphatidylinositol-4, 85.4 4.5 0.00015 48.2 12.1 91 363-460 355-455 (1091)
102 2wxf_A Phosphatidylinositol-4, 85.1 4.1 0.00014 48.1 11.6 68 41-111 218-294 (940)
103 2yrb_A Protein fantom; beta sa 85.0 3.5 0.00012 37.1 8.5 125 359-494 14-150 (156)
104 2wxf_A Phosphatidylinositol-4, 82.9 5.4 0.00018 47.1 11.3 92 363-460 217-324 (940)
105 3hhm_A Phosphatidylinositol-4, 80.2 7.4 0.00025 46.3 11.2 86 41-128 356-455 (1091)
106 3l4c_A Dedicator of cytokinesi 77.1 7.1 0.00024 37.3 8.0 58 399-458 78-138 (220)
107 2y3a_A Phosphatidylinositol-4, 69.9 4.8 0.00016 48.2 6.0 92 363-460 353-470 (1092)
108 1e7u_A Phosphatidylinositol 3- 67.9 21 0.00073 42.1 10.9 70 41-111 219-296 (961)
109 2y3a_A Phosphatidylinositol-4, 66.8 6.5 0.00022 47.1 6.3 68 41-111 354-430 (1092)
110 1e7u_A Phosphatidylinositol 3- 64.8 24 0.00081 41.8 10.4 94 363-460 218-330 (961)
111 3hd7_A Vesicle-associated memb 25.0 1.4E+02 0.0048 23.9 5.8 37 677-713 35-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=2.1e-32 Score=286.61 Aligned_cols=247 Identities=26% Similarity=0.383 Sum_probs=205.1
Q ss_pred cccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEEEEecc--
Q 004127 23 SITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFAFSKDR-- 97 (772)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~-- 97 (772)
..|.+.+++.|+. ..+.|.|+|++|+||+..+..|.+||||++++++ ++.+|++++++.||+|||+|.|.+..
T Consensus 4 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~ 81 (284)
T 2r83_A 4 KLGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 81 (284)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGG
T ss_pred ceeEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHH
Confidence 3577889988885 4569999999999999999889999999999974 47899999999999999999999853
Q ss_pred CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC--ceeeeEEEEEEEeeecCCCcCCC
Q 004127 98 IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGD--KVKTGELMLAVWMGTQADEAFPD 174 (772)
Q Consensus 98 ~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~--~~~~G~l~l~~~~~~~~d~~~~~ 174 (772)
.....|.|+|||.+.+ +|++||++.++|.++..+. ....|++|....+. ... |+|.+++.+.+
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~-G~i~l~l~~~p-------- 147 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKL-GDICFSLRYVP-------- 147 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCC-CEEEEEEEEET--------
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeecccccccccc-ccEEEEEEecC--------
Confidence 3468999999999998 8999999999999997652 35789999876432 234 99998886642
Q ss_pred cCCCCCccCCCCCccccccceeecCceEEEEEEEEEeecCCCCCCCCCCccEEEEEEC--C---eeeeeccccCCCCCCc
Q 004127 175 AWHSDAATVSGEGVANIRSKVYLSPKLWYVRVNIIEAQDLLPSDKSRFPEVFVKAILG--N---QASRTRISPSKTINPM 249 (772)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~ 249 (772)
..+.|.|.|++|++|+.++..+.+||||++++. + .+++|+++++ +.||.
T Consensus 148 -------------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~ 201 (284)
T 2r83_A 148 -------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPY 201 (284)
T ss_dssp -------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCE
T ss_pred -------------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCE
Confidence 234799999999999999998999999999985 2 4678999887 99999
Q ss_pred eeceeEEEeeCCC--CCcEEEEEEEccCCCCCceeEEEEEeccccccc--------cCCCCCCceeEEcccC
Q 004127 250 WNEDLMFVAAEPF--EEPLILTVEDRVAPNKDEVLGKCLIPLQAVQRR--------LDHKPVNTRWFNLEKH 311 (772)
Q Consensus 250 wne~f~f~~~~~~--~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~--------~~~~~~~~~w~~L~~~ 311 (772)
|||.|.|.+.... ...|.|+|||++..+++++||++.+++..+... ...+....+|++|...
T Consensus 202 wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 202 YNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 9999999986543 346999999999999999999999999864321 1233456799999875
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=8.4e-32 Score=281.99 Aligned_cols=231 Identities=25% Similarity=0.342 Sum_probs=191.3
Q ss_pred eEEEEEEEEEeecCCCCCCCCCCccEEEEEECC---eeeeeccccCCCCCCceeceeEEEeeCC--CCCcEEEEEEEccC
Q 004127 201 LWYVRVNIIEAQDLLPSDKSRFPEVFVKAILGN---QASRTRISPSKTINPMWNEDLMFVAAEP--FEEPLILTVEDRVA 275 (772)
Q Consensus 201 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~---~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~l~i~V~d~d~ 275 (772)
.+.|.|+|++|++|+.++..+.+||||++.+++ +.++|+++++ +.||.|||+|.|.+... ....|.|+|||++.
T Consensus 18 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 18 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 357999999999999999999999999999963 5788999987 99999999999998643 35689999999999
Q ss_pred CCCCceeEEEEEeccccccccCCCCCCceeEEcccCccccCccccccccceEEEEEEEcCCccccCCCcccCCCCCcccc
Q 004127 276 PNKDEVLGKCLIPLQAVQRRLDHKPVNTRWFNLEKHVIVDGEKKETKFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAK 355 (772)
Q Consensus 276 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~g~~~~~~~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~ 355 (772)
.+++++||++.++|.++.. ......|++|..... ......|++.+.+...
T Consensus 97 ~~~~~~lG~~~i~l~~l~~----~~~~~~w~~L~~~~~-----~~~~~~G~i~l~l~~~--------------------- 146 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDF----GHVTEEWRDLQSAEK-----EEQEKLGDICFSLRYV--------------------- 146 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCC----SSCEEEEEECBCCSS-----CCCCCCCEEEEEEEEE---------------------
T ss_pred CCCCceeEEEEEcchhccc----CCcceeEEEeecccc-----ccccccccEEEEEEec---------------------
Confidence 8899999999999999863 234678999987521 1123468887776532
Q ss_pred ccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC--C---EEEEeecccCCCCCeecceEEEEeeCC---CcE
Q 004127 356 QLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIVDSFGPRWNEQYTWEVFDP---CTV 427 (772)
Q Consensus 356 ~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~--~---~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~ 427 (772)
+..+.|.|.|++|+||+.+ |..|.+||||++.+. + ..+||+++++|+||+|||.|.|.+..+ ...
T Consensus 147 ----p~~~~l~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 219 (284)
T 2r83_A 147 ----PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQ 219 (284)
T ss_dssp ----TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEE
T ss_pred ----CcCCceEEEEEEeECCCCc---CCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceE
Confidence 2347999999999999987 667899999999983 3 357999999999999999999998754 357
Q ss_pred EEEEEEeCCcCCCCCCCCCCcccEEEEEecCcc------------ccCceEeeeEeeeec
Q 004127 428 ITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTL------------ETDRVYTHSYPLLVL 475 (772)
Q Consensus 428 l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l------------~~~~~~~~~~~L~~~ 475 (772)
|.|+|||++.++ ++++||.+.|++..+ ..+....+||+|...
T Consensus 220 l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 220 VVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEEECCSSS------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EEEEEEeCCCCC------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 999999999875 899999999999874 235677899998753
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.98 E-value=5.5e-32 Score=284.46 Aligned_cols=248 Identities=31% Similarity=0.424 Sum_probs=200.0
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeeecCCCCCeeccEEEEEecc--C
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKL---GNYKGTTKHFEKKSNPEWNQCFAFSKDR--I 98 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~---~~~~~kT~~~~~t~nP~Wne~f~f~v~~--~ 98 (772)
.|.+.+++.|+.. .+.|.|+|++|+||+..|..|.+||||++++ +.++++|+++++|.||+|||+|.|.+.. .
T Consensus 6 ~G~l~~~l~y~~~--~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 83 (296)
T 1dqv_A 6 CGRISFALRYLYG--SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAEL 83 (296)
T ss_dssp SCEEEEEEECCSS--SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred eeEEEEEEEEeCC--CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHh
Confidence 5778888888754 5699999999999999999999999999999 4478899999999999999999999853 3
Q ss_pred CCceEEEEEEecCCC-CCceeEEEEEE-ccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeeecCCCcCCCcC
Q 004127 99 QASVLEVLVKDKDVV-LDDLIGRVMFD-LNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGTQADEAFPDAW 176 (772)
Q Consensus 99 ~~~~L~i~V~d~~~~-~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~d~~~~~~~ 176 (772)
....|.|+|||++.+ +|++||++.++ +.++.... .....|++|....+.....|+|.+.+.+.+
T Consensus 84 ~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~---------- 149 (296)
T 1dqv_A 84 AQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP---------- 149 (296)
T ss_dssp SSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET----------
T ss_pred cCCEEEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc----------
Confidence 356899999999998 89999999996 54544321 224679999875433222399999887642
Q ss_pred CCCCccCCCCCccccccceeecCceEEEEEEEEEeecCCCCCCCCCCccEEEEEEC--C---eeeeeccccCCCCCCcee
Q 004127 177 HSDAATVSGEGVANIRSKVYLSPKLWYVRVNIIEAQDLLPSDKSRFPEVFVKAILG--N---QASRTRISPSKTINPMWN 251 (772)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~wn 251 (772)
..+.|.|.|++|++|+.++..|.+||||++++. + .+++|+++++ +.||.||
T Consensus 150 -----------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wn 205 (296)
T 1dqv_A 150 -----------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYN 205 (296)
T ss_dssp -----------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEE
T ss_pred -----------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeEC
Confidence 235799999999999999999999999999996 2 5788999987 9999999
Q ss_pred ceeEEEeeCCC--CCcEEEEEEEccCCCCCceeEEEEEecccccccc---------CCCCCCceeEEcccC
Q 004127 252 EDLMFVAAEPF--EEPLILTVEDRVAPNKDEVLGKCLIPLQAVQRRL---------DHKPVNTRWFNLEKH 311 (772)
Q Consensus 252 e~f~f~~~~~~--~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~---------~~~~~~~~w~~L~~~ 311 (772)
|.|.|.+.... ...|.|+|||++..+++++||++.+++.++.... ..+....+|+.|...
T Consensus 206 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 206 EALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp ECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred ceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 99999886543 3479999999999999999999999998764300 023345677777654
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=2e-31 Score=280.15 Aligned_cols=230 Identities=22% Similarity=0.359 Sum_probs=186.7
Q ss_pred eEEEEEEEEEeecCCCCCCCCCCccEEEEEE---CCeeeeeccccCCCCCCceeceeEEEeeCCC--CCcEEEEEEEccC
Q 004127 201 LWYVRVNIIEAQDLLPSDKSRFPEVFVKAIL---GNQASRTRISPSKTINPMWNEDLMFVAAEPF--EEPLILTVEDRVA 275 (772)
Q Consensus 201 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l---~~~~~kT~~~~~~t~nP~wne~f~f~~~~~~--~~~l~i~V~d~d~ 275 (772)
.+.|.|+|++|++|+.++..+.+||||++++ +++.++|+++++ +.||.|||+|.|.+.... ...|.|+|||+|.
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 4579999999999999999999999999999 467899999987 999999999999985432 4589999999999
Q ss_pred CCCCceeEEEEEe-ccccccccCCCCCCceeEEcccCccccCccccccccceEEEEEEEcCCccccCCCcccCCCCCccc
Q 004127 276 PNKDEVLGKCLIP-LQAVQRRLDHKPVNTRWFNLEKHVIVDGEKKETKFSSRIHLRICLDGGYHVLDESTHYSSDLRPTA 354 (772)
Q Consensus 276 ~~~d~~iG~~~i~-l~~l~~~~~~~~~~~~w~~L~~~~~~g~~~~~~~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~ 354 (772)
++++++||++.++ +.++.. .......|+.|.... ......|+|.+.++..
T Consensus 98 ~~~~~~iG~~~i~~l~~~~~---~~~~~~~w~~L~~~~------~~~~~~G~i~vsl~y~-------------------- 148 (296)
T 1dqv_A 98 FSRHDLIGQVVLDNLLELAE---QPPDRPLWRDILEGG------SEKADLGELNFSLCYL-------------------- 148 (296)
T ss_dssp SSCCCEEEEEECCCTTGGGS---SCSSCCCCEECBCCS------SCCSCCCEEEEEEEEE--------------------
T ss_pred CCCCceEEEEEecccccccc---CCccceeeecccccc------ccccccceEEEEEEec--------------------
Confidence 9999999999995 544432 123356899997641 1123468888876642
Q ss_pred cccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC--C---EEEEeecccCCCCCeecceEEEEeeCC---Cc
Q 004127 355 KQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIVDSFGPRWNEQYTWEVFDP---CT 426 (772)
Q Consensus 355 ~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~--~---~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~ 426 (772)
+..|.|.|.|++|+||+.+ |..|.+||||++.++ + .++||+++++++||+|||.|.|.+... ..
T Consensus 149 -----~~~~~l~v~v~~a~~L~~~---d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 220 (296)
T 1dqv_A 149 -----PTAGLLTVTIIKASNLKAM---DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENV 220 (296)
T ss_dssp -----TTTTEEEEEEEEEESCCCC---SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSC
T ss_pred -----cccceeEEEEEEeecCCcc---CCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCc
Confidence 2348999999999999988 667899999999995 3 468999999999999999999998754 35
Q ss_pred EEEEEEEeCCcCCCCCCCCCCcccEEEEEecCcccc-------------CceEeeeEeeee
Q 004127 427 VITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLET-------------DRVYTHSYPLLV 474 (772)
Q Consensus 427 ~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~-------------~~~~~~~~~L~~ 474 (772)
.|.|+|||++.++ ++++||.+.|++..+.. ++...+|++|..
T Consensus 221 ~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 221 GLSIAVVDYDCIG------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp CCCCEEEECCSSS------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred EEEEEEEeCCCCC------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 7999999999875 89999999999997632 445556666654
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=1.8e-20 Score=171.82 Aligned_cols=124 Identities=27% Similarity=0.459 Sum_probs=110.5
Q ss_pred cCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCcC
Q 004127 359 KPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGHI 438 (772)
Q Consensus 359 ~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~ 438 (772)
....|.|.|+|++|+||+.+ +..|.+||||++.++++.+||+++++++||.|||+|.|.+.++...|.|+|||++.+
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAA---DFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCS---SSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCC---CCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 45669999999999999987 667899999999999999999999999999999999999998888999999999986
Q ss_pred CCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEee
Q 004127 439 HGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFTC 494 (772)
Q Consensus 439 ~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 494 (772)
+ +|++||.+.+++.++..+. .+||+|.....++ +..|+|+++++|.+
T Consensus 86 ~------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 5 8999999999999998776 6899998764433 35699999999854
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.4e-19 Score=166.02 Aligned_cols=123 Identities=21% Similarity=0.315 Sum_probs=107.5
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeC----CCcEEEEEEEeCC
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFD----PCTVITVGVFDNG 436 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~----~~~~l~i~v~D~~ 436 (772)
..|.|.|+|++|+||+.+ +. |.+||||+++++++.+||+++++++||+|||.|.|.+.. ....|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~---~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKT---KF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCC---SS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCC---CC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 348999999999999987 66 899999999999999999999999999999999999975 3688999999999
Q ss_pred cCCCCCCCCCCcccEEEEEecCccccCceEeeeEe---eeecCCCCcccccEEEEEEEEeec
Q 004127 437 HIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYP---LLVLHPSGVRKMGEVQLAVRFTCS 495 (772)
Q Consensus 437 ~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~---L~~~~~~g~~~~G~i~l~~~f~~~ 495 (772)
.++ +|++||.+.|++.++..+.....|++ |.+. .+....|+|+++++|.|.
T Consensus 81 ~~~------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~--~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 81 TIG------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNE--KGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CSS------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT--TCCEEEEEEEEEEEECCC
T ss_pred CCC------CCceEEEEEEEHHHhccCCCceeEEeeeeccCC--CCCCCCCEEEEEEEEECC
Confidence 875 88999999999999988888889998 4432 333456999999999764
No 7
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=1.2e-19 Score=167.08 Aligned_cols=123 Identities=23% Similarity=0.340 Sum_probs=109.1
Q ss_pred CCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeeccc-CCCCCeecceEEEEeeCCCcEEEEEEEeCCcC
Q 004127 360 PSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIV-DSFGPRWNEQYTWEVFDPCTVITVGVFDNGHI 438 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~ 438 (772)
.+.|.|.|+|++|+||+.. +..|.+||||+++++++.+||++++ ++.||+|||+|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDA---DFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSC---CSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCc---ccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 3458999999999999987 6668999999999999999999998 89999999999999998888999999999986
Q ss_pred CCCCCCCCCcccEEEEEecCcc-ccCceEeeeEeeeecCCCCcccccEEEEEEEEeec
Q 004127 439 HGQGGGGKDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFTCS 495 (772)
Q Consensus 439 ~~~~~~~~~~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 495 (772)
+ +|++||.+.|++.++ ..+.....||+|.. +.+..|+|+++++|.|.
T Consensus 84 ~------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~----~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T------EDDAVGEATIPLEPVFVEGSIPPTAYNVVK----DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T------TTCCSEEEEEESHHHHHHSEEEEEEEEEEE----TTEEEEEEEEEEEEEEC
T ss_pred C------CCceEEEEEEEHHHhccCCCCCcEEEEeec----CCccCEEEEEEEEEEeC
Confidence 5 899999999999999 55666789999982 23456999999999875
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.3e-19 Score=166.13 Aligned_cols=124 Identities=34% Similarity=0.509 Sum_probs=109.7
Q ss_pred ecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCC
Q 004127 33 YDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDV 112 (772)
Q Consensus 33 ~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~ 112 (772)
....+..+.|.|+|++|+||++.+..|.+||||++++++++.+|++++++.||.|||+|.|.+.+. ...|.|+|||++.
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDG 84 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEET
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCC
Confidence 455678899999999999999999889999999999999999999999999999999999999864 5789999999999
Q ss_pred C-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC-ceeeeEEEEEEEee
Q 004127 113 V-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGD-KVKTGELMLAVWMG 165 (772)
Q Consensus 113 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~ 165 (772)
. +|++||++.++|.++..+ ..+|++|....+. ... |+|.+++.+.
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~-G~i~l~i~~~ 131 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFK-GVIYLEMDLI 131 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCS-SEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccc-eEEEEEEEEE
Confidence 8 899999999999999643 3589999877543 344 9999999774
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=5.2e-19 Score=163.68 Aligned_cols=124 Identities=27% Similarity=0.400 Sum_probs=108.5
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEeccC---CCceEEEEEEecCCC
Q 004127 37 EQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKDRI---QASVLEVLVKDKDVV 113 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~---~~~~L~i~V~d~~~~ 113 (772)
...|.|.|+|++|+||+..+. +.+||||++++++++++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 345799999999999999998 9999999999999999999999999999999999998643 468999999999998
Q ss_pred -CCceeEEEEEEccccCCCCCCCCCCCCeEEE---eecCCCCceeeeEEEEEEEeeec
Q 004127 114 -LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYR---LEDRKGDKVKTGELMLAVWMGTQ 167 (772)
Q Consensus 114 -~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~~G~l~l~~~~~~~ 167 (772)
+|++||++.++|.++..+. ....|++ |.+..+.... |+|.+++.|.+.
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~-G~l~l~~~~~p~ 134 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTG-ATIDLVIGYDPP 134 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEE-EEEEEEEEECCC
T ss_pred CCCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCC-CEEEEEEEEECC
Confidence 8999999999999997653 2468988 7776666666 999999998754
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=6e-19 Score=164.92 Aligned_cols=126 Identities=24% Similarity=0.374 Sum_probs=105.8
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCcCC--
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGHIH-- 439 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~~-- 439 (772)
.|.|.|+|++|+||+.+ |..|.+||||++.+++..+||+++++|+||.|||.|.|.+.++.+.|.|+|||++...
T Consensus 16 ~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAK---DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCC---CCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 48999999999999987 6678999999999999999999999999999999999999988899999999999740
Q ss_pred ---CCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEe
Q 004127 440 ---GQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFT 493 (772)
Q Consensus 440 ---~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 493 (772)
...+.++|++||.+.|++.++. ....+||+|......+ +..|+|+|++.|.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 0000128999999999999994 3458999998643322 3569999999885
No 11
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=167.49 Aligned_cols=119 Identities=21% Similarity=0.257 Sum_probs=101.7
Q ss_pred CCccEEEEEEEEecCCCCCccCC-------CCCCcCcEEEEEECCEE-EEeecccCCCCCeecceEEEEeeCCCcEEEEE
Q 004127 360 PSIGILELGVLSAHGLTPMKTKD-------GRGTTDAYCVAKYGQKW-VRTRTIVDSFGPRWNEQYTWEVFDPCTVITVG 431 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~~~~~~-------~~g~~dpyv~v~~~~~~-~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~ 431 (772)
...|.|+|+|++|+||++++... ..|.+||||+|.++++. .||+++++|+||+|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 45699999999999999874210 13679999999998876 699999999999999999999875 4689999
Q ss_pred EEeCCcCCCCCCCCCCcccEEEEEecCccccC----ceEeeeEeeeecCCCCcccccEEEEEEEEe
Q 004127 432 VFDNGHIHGQGGGGKDSRIGKVRIRLSTLETD----RVYTHSYPLLVLHPSGVRKMGEVQLAVRFT 493 (772)
Q Consensus 432 v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 493 (772)
|||+|.++ +|++||.+.|++.++..+ .....||+|.. .|+|+++++|.
T Consensus 105 V~D~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG------YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEEC
T ss_pred EEECCCCC------CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEEE
Confidence 99999875 899999999999999754 77899999953 49999999874
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=4.3e-19 Score=166.96 Aligned_cols=126 Identities=25% Similarity=0.393 Sum_probs=101.5
Q ss_pred cCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC------EEEEeecccCCCCCeecceEEEEeeCCCcEEEEEE
Q 004127 359 KPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGV 432 (772)
Q Consensus 359 ~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v 432 (772)
....+.|.|+|++|+||+.+ +..|.+||||++++++ ..+||+++++|+||+|||+|.|.+......|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKK---DILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCC---CCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 34558999999999999987 6668999999999963 57899999999999999999999988888999999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCce------EeeeEeeeecCCCCcccccEEEEEEEEee
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRV------YTHSYPLLVLHPSGVRKMGEVQLAVRFTC 494 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 494 (772)
||++.++ +|++||.+.|++.++..+.. ..+||+|......+ +..|+|++++.|.|
T Consensus 93 ~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 93 FDENRLT------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp EECCSSS------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred EECCCCc------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 9999875 89999999999999976542 25899997654322 45699999999854
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=4.7e-19 Score=163.09 Aligned_cols=125 Identities=27% Similarity=0.406 Sum_probs=108.5
Q ss_pred cCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeec-CCCCCeeccEEEEEeccCCCceEEEEEEecCCC-
Q 004127 36 VEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFE-KKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV- 113 (772)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~- 113 (772)
....+.|+|+|++|+||+..+..+.+||||++++++++.+|++++ ++.||+|||+|.|.+.+ ....|.|+|||++.+
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 356789999999999999999889999999999999999999998 89999999999999987 568999999999988
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeeecC
Q 004127 114 LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGTQA 168 (772)
Q Consensus 114 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~~ 168 (772)
+|++||++.++|.++.... .....||+|. . +.... |+|.+++.|.+..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~-~-~~~~~-G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEG----SIPPTAYNVV-K-DEEYK-GEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHS----EEEEEEEEEE-E-TTEEE-EEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCC----CCCcEEEEee-c-CCccC-EEEEEEEEEEeCC
Confidence 8999999999999995331 2356899998 3 33455 9999999997653
No 14
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=5.2e-19 Score=164.81 Aligned_cols=119 Identities=22% Similarity=0.369 Sum_probs=100.8
Q ss_pred cCceeEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCee-eeeeeecCCCCCeeccEEEEEeccCCCceEE
Q 004127 36 VEQMQYLYVRVVKAKDLPGKDV----------TGSCDPYVEVKLGNYK-GTTKHFEKKSNPEWNQCFAFSKDRIQASVLE 104 (772)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~~~----------~~~~dpyv~v~~~~~~-~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~ 104 (772)
....|.|+|+|++|+||++.|. .|.+||||++.+++++ .||+++++|.||+|||+|.|.+.+ ...|.
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEE
Confidence 4567899999999999998873 3679999999999865 799999999999999999999975 46899
Q ss_pred EEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEe
Q 004127 105 VLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWM 164 (772)
Q Consensus 105 i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (772)
|+|||.+.+ +|++||.+.|+|.++..+.+ +......||+|++. |+|.+.+.+
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~-~~~~~~~W~~L~~~-------G~i~l~l~~ 155 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTG-ASDTFEGWVDLEPE-------GKVFVVITL 155 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHT-TCSEEEEEEECBSS-------CEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccC-CCCcccEEEECCCC-------cEEEEEEEE
Confidence 999999998 89999999999999875411 12346799999752 999998876
No 15
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.6e-18 Score=166.95 Aligned_cols=126 Identities=25% Similarity=0.404 Sum_probs=100.9
Q ss_pred CCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC------EEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEE
Q 004127 360 PSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVF 433 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~ 433 (772)
...|.|.|+|++|+||+.+ +..|.+||||+|.+++ ..+||+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKK---DILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCc---CCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 3458999999999999987 6678999999999965 678999999999999999999999977789999999
Q ss_pred eCCcCCCCCCCCCCcccEEEEEecCccccCceE-e-----eeEeeeecCCCCcccccEEEEEEEEeec
Q 004127 434 DNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVY-T-----HSYPLLVLHPSGVRKMGEVQLAVRFTCS 495 (772)
Q Consensus 434 D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 495 (772)
|++.++ +|++||.+.|+|.++..+... . .||+|.....++ +..|+|+|+++|.|.
T Consensus 82 d~d~~~------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLT------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred ECCCCC------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 999875 899999999999999765432 2 799998654333 346999999999775
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=2.6e-18 Score=161.57 Aligned_cols=128 Identities=31% Similarity=0.418 Sum_probs=101.8
Q ss_pred cCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEe
Q 004127 36 VEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN------YKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKD 109 (772)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d 109 (772)
....+.|+|+|++|+||+..+..|.+||||++++++ .+++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 456689999999999999999889999999999984 578999999999999999999999764 5789999999
Q ss_pred cCCC-CCceeEEEEEEccccCCCCCCC-CCCCCeEEEeecCCCC-ceeeeEEEEEEEee
Q 004127 110 KDVV-LDDLIGRVMFDLNEVPKRIPPD-SPLAPQWYRLEDRKGD-KVKTGELMLAVWMG 165 (772)
Q Consensus 110 ~~~~-~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~ 165 (772)
++.. +|++||++.++|.++....... .....+||+|....+. ... |+|.++++|.
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~-G~i~l~l~~~ 152 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVK-GYLRLKMTYL 152 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCC-SEEEEEEEEC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcc-eEEEEEEEEe
Confidence 9998 8999999999999997664321 2334699999876432 345 9999999874
No 17
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.78 E-value=3.3e-18 Score=159.86 Aligned_cols=119 Identities=31% Similarity=0.527 Sum_probs=104.5
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCC----
Q 004127 38 QMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV---- 113 (772)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~---- 113 (772)
..+.|.|+|++|+||++.+..|.+||||++++++++.+|+++++|.||.|||+|.|.+... .+.|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 3689999999999999999899999999999999999999999999999999999999765 47899999999973
Q ss_pred --------CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCc-eeeeEEEEEEEee
Q 004127 114 --------LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDK-VKTGELMLAVWMG 165 (772)
Q Consensus 114 --------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~~~~~ 165 (772)
+|++||++.++|.++... ..+||+|....+.. .. |+|.+++++.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~-G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVS-GAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCC-CEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCc-eEEEEEEEEE
Confidence 899999999999999322 46899999765432 44 9999999874
No 18
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=1.2e-18 Score=160.18 Aligned_cols=120 Identities=21% Similarity=0.299 Sum_probs=100.8
Q ss_pred ccEEEEEEEEecCCCCCccCCC--------CCCcCcEEEEEECCEE-EEeecccCCCCCeecceEEEEeeCCCcEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDG--------RGTTDAYCVAKYGQKW-VRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGV 432 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~--------~g~~dpyv~v~~~~~~-~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v 432 (772)
.|.|+|+|++|+||++++.... .+.+||||++.+++.. .+|+++++|+||+|||+|.|.+.+. ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 3899999999999998742100 1239999999998876 6999999999999999999999876 8899999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccC--ceEeeeEeeeecCCCCcccccEEEEEEEEeecc
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETD--RVYTHSYPLLVLHPSGVRKMGEVQLAVRFTCSS 496 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~~ 496 (772)
||+|.++ +|++||.+.|++.++..+ .....|++|.. .|+|+++++|....
T Consensus 84 ~d~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~~~ 135 (136)
T 1gmi_A 84 FHDAPIG------YDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSGSS 135 (136)
T ss_dssp EECCSSS------SCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEEEE
T ss_pred EeCCCCC------CCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEecC
Confidence 9999875 899999999999999763 45689998853 49999999997643
No 19
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.2e-18 Score=158.08 Aligned_cols=117 Identities=17% Similarity=0.239 Sum_probs=99.5
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC---EEEEeecccCCCCCeecceEEEEeeC-CCcEEEEEEEeCCcC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ---KWVRTRTIVDSFGPRWNEQYTWEVFD-PCTVITVGVFDNGHI 438 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~---~~~~T~~~~~t~~P~Wne~~~~~v~~-~~~~l~i~v~D~~~~ 438 (772)
|.|.|+|++|+||+.++..+..|.+||||++.+++ ..+||+++++++||+|||+|.|.+.. ....|.|+|||++.+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 78999999999999853224568899999999985 67999999999999999999999964 467899999999874
Q ss_pred CCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEE
Q 004127 439 HGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRF 492 (772)
Q Consensus 439 ~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f 492 (772)
+|++||.+.++|.++..+.....|++|.. ...|.|+++++.
T Consensus 83 -------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~ 123 (126)
T 1rlw_A 83 -------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEV 123 (126)
T ss_dssp -------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEEC
T ss_pred -------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEe
Confidence 68899999999999999998999999963 233666666654
No 20
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=6e-18 Score=162.94 Aligned_cols=129 Identities=29% Similarity=0.419 Sum_probs=102.1
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEec
Q 004127 37 EQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN------YKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDK 110 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~ 110 (772)
...|.|+|+|++|+||+..+..|.+||||++++++ .+++|++++++.||.|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 45789999999999999999889999999999986 568999999999999999999999753 57899999999
Q ss_pred CCC-CCceeEEEEEEccccCCCCCC-CCCCCCeEEEeecCCCC-ceeeeEEEEEEEeeec
Q 004127 111 DVV-LDDLIGRVMFDLNEVPKRIPP-DSPLAPQWYRLEDRKGD-KVKTGELMLAVWMGTQ 167 (772)
Q Consensus 111 ~~~-~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~~~ 167 (772)
+.+ +|++||++.++|.++...... +.....+||+|....+. +.. |+|.+++.|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~-G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVK-GYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCC-SEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccC-EEEEEEEEEEeC
Confidence 998 999999999999999866422 12234489999876533 345 999999999765
No 21
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=2.8e-18 Score=157.73 Aligned_cols=117 Identities=18% Similarity=0.330 Sum_probs=99.7
Q ss_pred ceeEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCee-eeeeeecCCCCCeeccEEEEEeccCCCceEEE
Q 004127 38 QMQYLYVRVVKAKDLPGKDVTGS-----------CDPYVEVKLGNYK-GTTKHFEKKSNPEWNQCFAFSKDRIQASVLEV 105 (772)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~~~~~~-----------~dpyv~v~~~~~~-~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i 105 (772)
..|.|+|+|++|+||++.|..+. +||||++.++++. .+|+++++|.||+|||+|.|.+.+. ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 35799999999999998875433 9999999998864 7999999999999999999999764 88999
Q ss_pred EEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeee
Q 004127 106 LVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGT 166 (772)
Q Consensus 106 ~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (772)
+|||++.+ +|++||++.+++.++..+.. .....|++|.+. |+|.+++.+..
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~~-------G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEPE-------GKVYVIIDLSG 133 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBSS-------CEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCCC-------eEEEEEEEEEe
Confidence 99999988 89999999999999986531 224689999752 99999998864
No 22
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=5.8e-18 Score=161.63 Aligned_cols=127 Identities=21% Similarity=0.199 Sum_probs=103.7
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCC-CC
Q 004127 37 EQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV-LD 115 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~-~d 115 (772)
...+.|.|+|++|++|++.+..+.+||||++++++++++|+++++|.||+|||+|.|.+.. ...|.|+|||++.+ +|
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCC
Confidence 3467899999999999944434559999999999999999999999999999999999864 78999999999998 99
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC-ceeeeEEEEEEEeee
Q 004127 116 DLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGD-KVKTGELMLAVWMGT 166 (772)
Q Consensus 116 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~~ 166 (772)
++||++.++|.++.............|++|....+. ... |+|.+++.+..
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~-G~L~v~l~~l~ 161 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETI-GDLSICLDGLQ 161 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEE-EEEEEEEESEE
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCccc-EEEEEEEeeee
Confidence 999999999999875432111223679999986433 345 99999998764
No 23
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=5.2e-18 Score=153.88 Aligned_cols=115 Identities=25% Similarity=0.417 Sum_probs=97.8
Q ss_pred eeEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCC
Q 004127 39 MQYLYVRVVKAKDLPGK---DVTGSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDV 112 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~---~~~~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~ 112 (772)
.+.|.|+|++|+||+.. +..|.+||||++++++ ++++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 46899999999999984 5568999999999996 68899999999999999999999966667899999999998
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEE
Q 004127 113 VLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVW 163 (772)
Q Consensus 113 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~ 163 (772)
.+|++||++.++|.++..+. ....|++|.+. -. |+|.+++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~----~~-g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV----TE-MVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT----EE-EEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC----ce-EEEEEEEE
Confidence 88999999999999997542 35689999763 12 66666653
No 24
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=8.2e-18 Score=154.03 Aligned_cols=116 Identities=21% Similarity=0.338 Sum_probs=97.5
Q ss_pred cCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeecCCCCCeeccEEEEE-ec--
Q 004127 25 TGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKL-----GNYKGTTKHFEKKSNPEWNQCFAFS-KD-- 96 (772)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~-v~-- 96 (772)
|+..+.++++.. .+.|.|+|++|+||+. +..|.+||||++++ ...+.||+++++|.||+|||+|.|. +.
T Consensus 7 ~~~~~~~~~~~~--~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~ 83 (134)
T 2b3r_A 7 GSGAVKLSVSYR--NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE 83 (134)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH
T ss_pred ccEEEEEEEeec--CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH
Confidence 344567777764 4699999999999997 66889999999999 3467899999999999999999999 64
Q ss_pred cCCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 004127 97 RIQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDR 148 (772)
Q Consensus 97 ~~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (772)
++....|.|+|||++.+ +|++||++.++|.++..+. ...+||+|.+.
T Consensus 84 ~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 131 (134)
T 2b3r_A 84 TLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAA 131 (134)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC-
T ss_pred HhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCc
Confidence 33568999999999998 8999999999999997642 35799999875
No 25
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.9e-18 Score=161.94 Aligned_cols=117 Identities=18% Similarity=0.238 Sum_probs=100.7
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeeeecCCCCCeeccEEEEEecc
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN---Y---KGTTKHFEKKSNPEWNQCFAFSKDR 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~---~---~~kT~~~~~t~nP~Wne~f~f~v~~ 97 (772)
.|.+.+++.|+. ..+.|.|+|++|+||+++|..|.+||||++++.+ . ++||+++++|.||+|||+|.|.+..
T Consensus 29 ~G~l~~sl~y~~--~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 29 ATRIQIALKYDE--KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp CEEEEEEEEEET--TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred cEEEEEEEEEcC--CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 577888888875 4569999999999999999999999999999975 2 7899999999999999999999853
Q ss_pred --CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEee
Q 004127 98 --IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLE 146 (772)
Q Consensus 98 --~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 146 (772)
+....|.|+|||++.. ++++||++.++|.++... .....+||+|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~----~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS----GERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT----CCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC----CCccccceEcc
Confidence 2357899999999998 999999999999999532 13367999986
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=6.2e-18 Score=154.03 Aligned_cols=115 Identities=28% Similarity=0.521 Sum_probs=95.9
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeecCCCCCeeccEEEEEec--
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKL-----GNYKGTTKHFEKKSNPEWNQCFAFSKD-- 96 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~-- 96 (772)
.|.+.+++.|+.. .+.|.|+|++|+||++.+..|.+||||++++ +..+.+|+++++|.||+|||+|.|.+.
T Consensus 4 ~G~l~~~l~y~~~--~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 4 SGQLSIKLWFDKV--GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp CCEEEEEEEEETT--TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred eEEEEEEEEEccC--CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCH
Confidence 4667888888754 4699999999999999998899999999999 346889999999999999999999952
Q ss_pred -cCCCceEEEEEEecCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEee
Q 004127 97 -RIQASVLEVLVKDKDVV-L--DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLE 146 (772)
Q Consensus 97 -~~~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 146 (772)
+.....|.|+|||++.. + +++||++.++|.++.... ..+||+|+
T Consensus 82 ~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 82 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred HHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 33467999999999988 5 999999999999987542 57999984
No 27
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=9.7e-18 Score=157.34 Aligned_cols=104 Identities=24% Similarity=0.356 Sum_probs=93.5
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE---CCEEEEeecccCCCCCeecceEEEEeeC---CCcEEEEEEEeC
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY---GQKWVRTRTIVDSFGPRWNEQYTWEVFD---PCTVITVGVFDN 435 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~---~~~~~~T~~~~~t~~P~Wne~~~~~v~~---~~~~l~i~v~D~ 435 (772)
.+.|.|+|++|+||+.+ +..|.+||||++++ +...+||++++++.||+|||+|.|.+.. ....|.|+|||+
T Consensus 41 ~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 117 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 117 (152)
T ss_dssp TTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCc---cCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEEC
Confidence 47999999999999987 66789999999999 4567899999999999999999998874 367899999999
Q ss_pred CcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 436 GHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 436 ~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
+.++ +|++||.+.|++.++..+....+||+|.+
T Consensus 118 d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 118 DRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CSSS------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCC------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9875 89999999999999988888899999975
No 28
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.2e-17 Score=156.81 Aligned_cols=120 Identities=31% Similarity=0.436 Sum_probs=103.3
Q ss_pred CcccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeecCCCCCeeccEEEEEecc-
Q 004127 22 GSITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLG---NYKGTTKHFEKKSNPEWNQCFAFSKDR- 97 (772)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~~- 97 (772)
...|.+.+++.|+. ..+.|.|+|++|+||+..+..+.+||||++++. .++.+|++++++.||+|||+|.|.+..
T Consensus 26 ~~~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 103 (152)
T 1rsy_A 26 EKLGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS 103 (152)
T ss_dssp CCCCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHH
T ss_pred CCceEEEEEEEEeC--CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHH
Confidence 34677888888875 456999999999999999988999999999995 367899999999999999999999853
Q ss_pred -CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 004127 98 -IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDR 148 (772)
Q Consensus 98 -~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (772)
+....|.|+|||++.+ +|++||++.++|.++..+. ...+||+|.+.
T Consensus 104 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 104 ELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred HcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 2468899999999998 8999999999999996542 35799999764
No 29
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=154.39 Aligned_cols=119 Identities=33% Similarity=0.499 Sum_probs=102.7
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEEEEec---c
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFAFSKD---R 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~---~ 97 (772)
.|.+.+++.|.. ..+.|.|+|++|+||+..+..|.+||||++++.+ ++.+|++++++.||+|||+|.|.+. +
T Consensus 12 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 12 LGRIQFSVGYNF--QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp CCEEEEEEEECS--SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred eeEEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 577788888774 5679999999999999999889999999999953 6789999999999999999999852 2
Q ss_pred CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 98 IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 98 ~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
.....|.|+|||++.+ +|++||++.++|.++..+. ....||+|.+..
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 137 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSG 137 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCC
Confidence 3467899999999998 8999999999999997653 357899998764
No 30
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=3.4e-17 Score=151.54 Aligned_cols=120 Identities=21% Similarity=0.332 Sum_probs=103.0
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC---CE
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG---QK 398 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~---~~ 398 (772)
...|+|++.+... +..+.|.|+|++|+||+.+ +..|.+||||++.+. ..
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 10 ENLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAK---DFSGTSDPFVKIYLLPDKKH 61 (141)
T ss_dssp CCCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCC---SSSSCCCEEEEEEEESCCSS
T ss_pred ceeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCCCCCcEEEEEEECCCCc
Confidence 3478988888642 2337999999999999987 667899999999993 45
Q ss_pred EEEeecccCCCCCeecceEEEEeeC----CCcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 399 WVRTRTIVDSFGPRWNEQYTWEVFD----PCTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 399 ~~~T~~~~~t~~P~Wne~~~~~v~~----~~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
.+||++++++.||+|||+|.|.+.. ....|.|+|||++.++ ++++||.+.|++.++..+.....||+|..
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS------RNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS------SCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC------CCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 7999999999999999999998642 3578999999999875 89999999999999988888899999987
Q ss_pred c
Q 004127 475 L 475 (772)
Q Consensus 475 ~ 475 (772)
.
T Consensus 136 ~ 136 (141)
T 2d8k_A 136 S 136 (141)
T ss_dssp C
T ss_pred C
Confidence 5
No 31
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.73 E-value=1.4e-17 Score=154.56 Aligned_cols=117 Identities=32% Similarity=0.457 Sum_probs=101.3
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeeecCCCCCeeccEEEEEec--cC
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLG---NYKGTTKHFEKKSNPEWNQCFAFSKD--RI 98 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~---~~~~kT~~~~~t~nP~Wne~f~f~v~--~~ 98 (772)
.|.+.+++.|.. ..+.|.|+|++|+||+..+..+.+||||++++. .++.+|++++++.||+|||+|.|.+. ++
T Consensus 20 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 97 (143)
T 3f04_A 20 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 97 (143)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHH
T ss_pred eEEEEEEEEEeC--CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhc
Confidence 566778887774 557999999999999999988999999999994 46889999999999999999999985 33
Q ss_pred CCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeec
Q 004127 99 QASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLED 147 (772)
Q Consensus 99 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 147 (772)
....|.|+|||++.+ +|++||++.++|.++..+. ....|++|++
T Consensus 98 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 98 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred CCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 458999999999998 9999999999999997652 3568999975
No 32
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=2.2e-17 Score=150.99 Aligned_cols=123 Identities=22% Similarity=0.296 Sum_probs=98.7
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC--EEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCcCCC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ--KWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGHIHG 440 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~--~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~~~ 440 (772)
..|+|+|++|++|+.+ |..|.+||||++.+++ +.+||+++++|+||+|||.|.|.+.++. .|.|+|||++.++.
T Consensus 5 ~~L~V~v~~a~~L~~~---d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKK---DFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEESCCCC---STTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTS
T ss_pred EEEEEEEEEeECCCCC---CCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCC
Confidence 5899999999999987 6778999999999964 7899999999999999999999998764 49999999998640
Q ss_pred CCCCCCCcccEEEEEecCcc-ccCceEeeeEeeeecCCCC-cccccEEEEEEEE
Q 004127 441 QGGGGKDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLHPSG-VRKMGEVQLAVRF 492 (772)
Q Consensus 441 ~~~~~~~~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g-~~~~G~i~l~~~f 492 (772)
+..|++||.+.|++.++ ........|++|....+.+ .+..|+|++++..
T Consensus 81 ---~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 ---KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp ---STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ---CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 11389999999999988 2223235789997653222 2347999988864
No 33
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=3.8e-18 Score=158.26 Aligned_cols=117 Identities=32% Similarity=0.548 Sum_probs=101.6
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeeeecCCCCCeecc
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNY--------------KGTTKHFEKKSNPEWNQ 89 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~--------------~~kT~~~~~t~nP~Wne 89 (772)
.|.+.+++.|+ .+.|.|+|++|+||++.+..|.+||||++++++. +.+|+++++|.||+|||
T Consensus 6 ~G~i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 6 TGEIQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCEEEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred ceEEEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 57788998888 5799999999999999998999999999999873 47999999999999999
Q ss_pred EEEEE-ec--cCCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 90 CFAFS-KD--RIQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 90 ~f~f~-v~--~~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
+|.|. +. ++....|.|+|||++.+ +|++||++.++|.++.... ...+||+|.+..
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 99997 53 33467999999999998 8999999999999986542 257999998764
No 34
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=8.9e-18 Score=157.34 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=91.6
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC------EEEEeecccCCCCCeecceEEEEeeCC---CcEEEEE
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVG 431 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~ 431 (772)
..+.|.|.|++|+||+++ |..|.+||||++++.+ ..+||+++++|+||+|||+|.|.+... ...|.|+
T Consensus 41 ~~~~L~V~Vi~a~~L~~~---d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSAL---LQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp TTTEEEEEEEEEECGGGT---CCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEccCcCCc---ccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 348999999999999988 6778999999999954 269999999999999999999998742 5689999
Q ss_pred EEeCCcCCCCCCCCCCcccEEEEEecCccc-cCceEeeeEeee
Q 004127 432 VFDNGHIHGQGGGGKDSRIGKVRIRLSTLE-TDRVYTHSYPLL 473 (772)
Q Consensus 432 v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~-~~~~~~~~~~L~ 473 (772)
|||+|.++ ++++||.+.|+|.++. .+....+||+|.
T Consensus 118 V~d~d~~~------~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSH------LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTS------CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCC------CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99999875 8999999999999995 466778999985
No 35
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=2.9e-17 Score=156.80 Aligned_cols=123 Identities=13% Similarity=0.155 Sum_probs=101.4
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCcCCC
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGHIHG 440 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~~~ 440 (772)
..+.|+|+|++|++|+.. +..+.+||||+|.++++.+||+++++|+||+|||+|.|.+. +...|.|+|||+|.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~---~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~- 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENK---KNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK- 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC-----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS-
T ss_pred CceEEEEEEEEeECCCCc---ccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC-
Confidence 447899999999999844 23345999999999999999999999999999999999884 5889999999999875
Q ss_pred CCCCCCCcccEEEEEecCccccC-----ceEeeeEeeeecCCCCcccccEEEEEEEEee
Q 004127 441 QGGGGKDSRIGKVRIRLSTLETD-----RVYTHSYPLLVLHPSGVRKMGEVQLAVRFTC 494 (772)
Q Consensus 441 ~~~~~~~~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 494 (772)
+|++||.+.+++.++..+ .....|++|.... .+.+..|+|.+.+.+.+
T Consensus 109 -----~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~-~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 -----SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK-EPTETIGDLSICLDGLQ 161 (173)
T ss_dssp -----CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS-CTTSEEEEEEEEEESEE
T ss_pred -----CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC-CCCcccEEEEEEEeeee
Confidence 899999999999998532 1236799998763 23345799999998754
No 36
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=8.1e-18 Score=155.85 Aligned_cols=119 Identities=27% Similarity=0.497 Sum_probs=102.2
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeeeeeeeecCCCCCeeccEEEEEe-c-
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLG-----NYKGTTKHFEKKSNPEWNQCFAFSK-D- 96 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v-~- 96 (772)
.|.+.+++.|... .+.|.|+|++|+||+..+..+.+||||++++. .++++|+++++|.||+|||+|.|.+ .
T Consensus 7 ~G~i~~~l~y~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 7 GGQLSIKLWFDKV--GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp CCEEEEEEEEETT--TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred ccEEEEEEEEeCC--CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 5778888888754 46999999999999999988999999999993 4688999999999999999999994 2
Q ss_pred -cCCCceEEEEEEecCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 004127 97 -RIQASVLEVLVKDKDVV-L--DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKG 150 (772)
Q Consensus 97 -~~~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (772)
++....|.|+|||++.. + +++||++.++|.++.... ..+||+|.+.+.
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~ 136 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDS 136 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSS
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECccccc
Confidence 33458999999999998 5 999999999999986542 579999998653
No 37
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=6.8e-18 Score=157.66 Aligned_cols=122 Identities=17% Similarity=0.300 Sum_probs=102.6
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC-----
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG----- 396 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~----- 396 (772)
...|+|.+.+... +..+.|.|.|++|+||+.++ +..|.+||||++.++
T Consensus 7 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d--~~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYAD--EAKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSB--TTTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCcc--cCCCCCCeEEEEEEEcCCcc
Confidence 3478998888743 23489999999999999873 146889999999995
Q ss_pred CEEEEeecccCCCCCeecceEEEEeeCC---CcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeee
Q 004127 397 QKWVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLL 473 (772)
Q Consensus 397 ~~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~ 473 (772)
...+||+++++|+||+|||+|.|.+... ...|.|+|||++.++ +|++||.+.|+|.++..+.....||+|.
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 133 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG------RNTFLGEAEIQMDSWKLDKKLDHCLPLH 133 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG------CEEEEEEEEEEHHHHHHHCCSEEEEECB
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc------CCcEEEEEEEEcccccccCCccceEECc
Confidence 2478999999999999999999998753 457999999999876 8999999999999998776778999998
Q ss_pred ecC
Q 004127 474 VLH 476 (772)
Q Consensus 474 ~~~ 476 (772)
+..
T Consensus 134 ~~~ 136 (148)
T 3fdw_A 134 GKI 136 (148)
T ss_dssp CC-
T ss_pred Ccc
Confidence 754
No 38
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.72 E-value=2e-17 Score=153.60 Aligned_cols=105 Identities=24% Similarity=0.353 Sum_probs=93.6
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE---CCEEEEeecccCCCCCeecceEEEEeeC---CCcEEEEEEEe
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY---GQKWVRTRTIVDSFGPRWNEQYTWEVFD---PCTVITVGVFD 434 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~---~~~~~~T~~~~~t~~P~Wne~~~~~v~~---~~~~l~i~v~D 434 (772)
..+.|.|+|++|++|+.+ +..|.+||||++.+ +.+.+||+++++|.||+|||+|.|.+.. ....|.|+|||
T Consensus 32 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp TTTEEEEEEEEEECCCCB---GGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCC---CCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 348999999999999987 55688999999999 4567999999999999999999999874 34789999999
Q ss_pred CCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 435 NGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 435 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
++.++ +|++||.+.++|.++..+....+||+|..
T Consensus 109 ~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 109 FDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCSSS------CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCC------CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99875 89999999999999998888899999964
No 39
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.7e-17 Score=149.73 Aligned_cols=102 Identities=20% Similarity=0.388 Sum_probs=85.4
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----CCEEEEeecccCCCCCeecceEEEEeeC----CCcEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIVDSFGPRWNEQYTWEVFD----PCTVITVGV 432 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~t~~P~Wne~~~~~v~~----~~~~l~i~v 432 (772)
.+.|.|+|++|+||+.+ +..|.+||||++.+ +...+||+++++|.||+|||+|.|.+.. ....|.|+|
T Consensus 17 ~~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V 93 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93 (129)
T ss_dssp TTEEEEEEEEEESCCCC---TTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEE
T ss_pred CCEEEEEEEEeeCCCCC---CCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEE
Confidence 38999999999999987 66789999999999 4568999999999999999999999642 257899999
Q ss_pred EeCCcCCCCCCCCC--CcccEEEEEecCccccCceEeeeEeee
Q 004127 433 FDNGHIHGQGGGGK--DSRIGKVRIRLSTLETDRVYTHSYPLL 473 (772)
Q Consensus 433 ~D~~~~~~~~~~~~--~~~lG~~~i~l~~l~~~~~~~~~~~L~ 473 (772)
||++.++ + +++||.+.+++.++.... ..+||+|.
T Consensus 94 ~d~d~~~------~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 94 WDQARVR------EEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEC-------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EECCcCc------CcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9999864 4 999999999999987654 68999973
No 40
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=4.9e-17 Score=149.71 Aligned_cols=116 Identities=18% Similarity=0.308 Sum_probs=98.3
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC----eeeeeeeecCCCCCeeccEEEEEecc--
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN----YKGTTKHFEKKSNPEWNQCFAFSKDR-- 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~----~~~kT~~~~~t~nP~Wne~f~f~v~~-- 97 (772)
.|.+.+++.|+.. .+.|.|+|++|++ .|..|.+||||++++.+ .+.+|+++++|.||+|||+|.|.+..
T Consensus 12 ~G~l~~sl~y~~~--~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 12 APKLHYCLDYDCQ--KAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CCEEEEEEEEETT--TTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred ceEEEEEEEEeCC--CCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 6778999988754 4699999999993 67788999999999942 36899999999999999999999853
Q ss_pred CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 98 IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 98 ~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
+....|.|+|||++.+ +|++||++.++|.++... ....+|++|.+..
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~-----~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVP-----LGAAQWGELKTSG 134 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSC-----TTCCEEEECCCCS
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCc-----ccccceeeCcCCC
Confidence 3457899999999998 999999999999999643 2367999998764
No 41
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=5.4e-17 Score=148.37 Aligned_cols=119 Identities=18% Similarity=0.290 Sum_probs=99.5
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCC-C-
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN--YKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV-L- 114 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~--~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~-~- 114 (772)
...|+|+|++|++|++.|..|.+||||++++++ ++++|+++++|.||+|||+|.|.+... +.|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 458999999999999999999999999999985 789999999999999999999999764 4599999999987 4
Q ss_pred --CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC---ceeeeEEEEEEEe
Q 004127 115 --DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGD---KVKTGELMLAVWM 164 (772)
Q Consensus 115 --d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~---~~~~G~l~l~~~~ 164 (772)
|++||++.+++.++..... ...+|++|....+. ... |+|.++++.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~-G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVR-GQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCC-SEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCcee-EEEEEEEEc
Confidence 8999999999998843321 13589999876322 245 999998854
No 42
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=2.3e-17 Score=151.98 Aligned_cols=116 Identities=32% Similarity=0.466 Sum_probs=100.7
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeecCCCCCeeccEEEEEeccC
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKL-----GNYKGTTKHFEKKSNPEWNQCFAFSKDRI 98 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~ 98 (772)
.|.+.+++.| ..+.|.|+|++|+||+..+..|.+||||++++ +..+.+|++++++.||.|||+|.|.+...
T Consensus 4 ~G~l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 4 RGRIYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCEEEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred ceEEEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 4677888887 34799999999999999998999999999999 44689999999999999999999998542
Q ss_pred -CCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 99 -QASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 99 -~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
....|.|+|||++.. +|++||++.++|.++.... ..+||+|.+..
T Consensus 80 ~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 80 DKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred hcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 245899999999988 8999999999999996542 57999998764
No 43
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=3.8e-17 Score=151.43 Aligned_cols=121 Identities=19% Similarity=0.230 Sum_probs=99.9
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC----
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ---- 397 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~---- 397 (772)
...|+|++.+... +..+.|.|.|++|+||+.+ +..| +||||++++.+
T Consensus 8 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g-~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 8 SPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAF---SEDG-SDPYVRMYLLPDKRR 58 (142)
T ss_dssp CSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCS---STTC-CCEEEEEEEESCCCS
T ss_pred CCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCC-CCeeEEEEEEcCCCC
Confidence 4479998888743 2337999999999999988 6667 99999999932
Q ss_pred -EEEEeecccCCCCCeecceEEEEeeC---CCcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeee
Q 004127 398 -KWVRTRTIVDSFGPRWNEQYTWEVFD---PCTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLL 473 (772)
Q Consensus 398 -~~~~T~~~~~t~~P~Wne~~~~~v~~---~~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~ 473 (772)
..+||+++++|+||+|||+|.|.+.. ....|.|+|||++.++. ..+++||.+.|++.++..+....+||+|.
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~----~~~~~iG~~~i~l~~~~~~~~~~~W~~L~ 134 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLS----KDKGLLGKVLVALASEELAKGWTQWYDLT 134 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSC----CSCCCCEEEEEECCCSTTTTCBCCBCCCB
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccc----cCCcEEEEEEEecccccccccccceeecc
Confidence 56899999999999999999999864 24589999999997641 12579999999999998777788999998
Q ss_pred ec
Q 004127 474 VL 475 (772)
Q Consensus 474 ~~ 475 (772)
..
T Consensus 135 ~~ 136 (142)
T 2dmg_A 135 ED 136 (142)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 44
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=4.2e-17 Score=153.11 Aligned_cols=118 Identities=23% Similarity=0.371 Sum_probs=100.0
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEe--c
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSK--D 96 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v--~ 96 (772)
.|...+++.|+.. .+.|.|+|++|+||+..+ .|.+||||++++.+ .+.+|+++++|.||+|||+|.|.+ .
T Consensus 13 ~G~~~lsL~y~~~--~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 89 (153)
T 3fbk_A 13 QGAGQLRLSIDAQ--DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 89 (153)
T ss_dssp CCCCEEEEEEEES--SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEECC--CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccH
Confidence 5778888888764 469999999999999998 68999999999943 578999999999999999999998 4
Q ss_pred cCCCceEEEEEEecCCC-C-CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 97 RIQASVLEVLVKDKDVV-L-DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 97 ~~~~~~L~i~V~d~~~~-~-d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
+. ...|.|+|||.+.+ + |++||++.++|.++.... .....||+|.+..
T Consensus 90 ~~-~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~----~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 90 DD-QKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD----KEISGWYYLLGEH 139 (153)
T ss_dssp GT-TSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC------CCEEEEEECBCTT
T ss_pred Hh-CCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC----CccccEEECCChh
Confidence 44 35699999999997 5 999999999999997521 2357899998865
No 45
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=5.2e-17 Score=149.56 Aligned_cols=103 Identities=26% Similarity=0.427 Sum_probs=91.8
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----CCEEEEeecccCCCCCeecceEEEEeeCC--CcEEEEEEEeC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIVDSFGPRWNEQYTWEVFDP--CTVITVGVFDN 435 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~t~~P~Wne~~~~~v~~~--~~~l~i~v~D~ 435 (772)
|.|.|.|++|+||+.+ +..|.+||||++.+ +...+||++++++.||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPM---DPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCC---STTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 7999999999999987 66789999999999 55679999999999999999999998753 45899999999
Q ss_pred CcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 436 GHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 436 ~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
+.++ +|++||.+.+++.++..+. ..+||+|...
T Consensus 93 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9865 8999999999999997655 7899999764
No 46
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=5.3e-17 Score=148.64 Aligned_cols=104 Identities=13% Similarity=0.214 Sum_probs=91.5
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----CCEEEEeecccCCCCCeecceEEEE-eeC---CCcEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIVDSFGPRWNEQYTWE-VFD---PCTVITVGV 432 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~t~~P~Wne~~~~~-v~~---~~~~l~i~v 432 (772)
.+.|.|.|++|+||+. +..|.+||||++++ +...+||+++++|+||+|||+|.|. +.. ....|.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3799999999999985 45688999999998 3467899999999999999999999 763 457999999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
||++.++ ++++||.+.|+|.++..+.....||+|.+.
T Consensus 95 ~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 95 LSAESLR------ENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EECCSSS------CCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EECCCCC------CCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 9999875 889999999999999988888999999753
No 47
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=4.6e-17 Score=150.77 Aligned_cols=121 Identities=17% Similarity=0.358 Sum_probs=100.4
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----C
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----G 396 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~ 396 (772)
...|+|.+.+... +..+.|.|.|++|+||+.+ +..|.+||||++++ +
T Consensus 5 ~~~G~i~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---SSSCCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEe-------------------------CCCCEEEEEEEEccCCCCc---CCCCCCCCEEEEEEecCCCC
Confidence 3479998888753 2337999999999999987 66789999999998 4
Q ss_pred CEEEEeecccCCCCCeecceEEEEeeC----CCcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEee
Q 004127 397 QKWVRTRTIVDSFGPRWNEQYTWEVFD----PCTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPL 472 (772)
Q Consensus 397 ~~~~~T~~~~~t~~P~Wne~~~~~v~~----~~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L 472 (772)
...+||+++++|+||+|||.|.|.+.. ....|.|+|||++.++ .+++++||.+.|++.++.... ..+||+|
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~----~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 131 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR----EEESEFLGEILIELETALLDD-EPHWYKL 131 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS----SCCBCCCEEEEEEGGGCCCSS-EEEEEEC
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc----CCCCceEEEEEEEccccCCCC-CCceEEC
Confidence 567999999999999999999999542 2478999999999864 112899999999999986654 7899999
Q ss_pred eec
Q 004127 473 LVL 475 (772)
Q Consensus 473 ~~~ 475 (772)
...
T Consensus 132 ~~~ 134 (141)
T 1v27_A 132 QTH 134 (141)
T ss_dssp BCC
T ss_pred ccc
Confidence 865
No 48
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=4.3e-17 Score=155.95 Aligned_cols=104 Identities=23% Similarity=0.338 Sum_probs=92.4
Q ss_pred cEEEEEEEEecCCCCCccCCC-CCCcCcEEEEEECC-----EEEEeecccCCCCCeecceEEEEeeCCCcEEEEEEE-eC
Q 004127 363 GILELGVLSAHGLTPMKTKDG-RGTTDAYCVAKYGQ-----KWVRTRTIVDSFGPRWNEQYTWEVFDPCTVITVGVF-DN 435 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~-~g~~dpyv~v~~~~-----~~~~T~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~-D~ 435 (772)
+.|.|+|++|+||+.+ |. .|.+||||+|.+++ ..+||+++++|+||+|||+|.|.+......|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~---d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK---PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TEEEEEEEEEESCCCC---C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 7999999999999987 53 68899999999843 378999999999999999999998766789999999 99
Q ss_pred CcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 436 GHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 436 ~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
|.++ +|++||.+.|+|.++..+....+||+|...
T Consensus 107 d~~~------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMD------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTC------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCC------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9865 899999999999999888888999999865
No 49
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=1.3e-16 Score=146.90 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=88.5
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC---C-EEEEeecccCCCCCeecceEEEEeeCC---CcEEEEEEEe
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG---Q-KWVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVGVFD 434 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~---~-~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~v~D 434 (772)
.+.|.|+|++|++ + |..|.+||||++.+. + ..+||+++++|+||+|||+|.|.+... ...|.|+|||
T Consensus 25 ~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d 98 (138)
T 1wfm_A 25 KAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRT 98 (138)
T ss_dssp TTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEE
T ss_pred CCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEE
Confidence 3799999999994 3 667899999999993 2 358999999999999999999998753 5689999999
Q ss_pred CCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 435 NGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 435 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
+|.++ +|++||.+.++|.++..+....+|++|...
T Consensus 99 ~d~~~------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 99 CDRFS------RHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp CCSSC------TTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCCCC------CCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 99875 899999999999999766677899999864
No 50
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=154.74 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=100.9
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCC-CCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEecc
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKD-VTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDR 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~-~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~ 97 (772)
.|.+.+++.|.. ..+.|.|+|++|+||+..+ ..+.+||||++++.+ .+.+|+++++|.||+|||+|.|.+..
T Consensus 9 ~G~l~~sl~y~~--~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 86 (148)
T 3fdw_A 9 TGRIAFSLKYEQ--QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPE 86 (148)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCS
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeCh
Confidence 466788887774 4569999999999999888 578999999999973 47899999999999999999999854
Q ss_pred C--CCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 004127 98 I--QASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKG 150 (772)
Q Consensus 98 ~--~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (772)
. ....|.|+|||++.+ +|++||++.++|.++..+. ...+||+|.++.+
T Consensus 87 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 87 SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK-----KLDHCLPLHGKIS 137 (148)
T ss_dssp TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC-----CSEEEEECBCC--
T ss_pred hHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccC-----CccceEECcCccc
Confidence 2 356799999999998 8999999999999997553 2569999988753
No 51
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.1e-16 Score=147.42 Aligned_cols=105 Identities=21% Similarity=0.300 Sum_probs=89.0
Q ss_pred ccEEEEEEEEecCCCCCccCCCC-CCcCcEEEEEEC---CEEEEeecccCCCCCeecceEEEE-eeC---CCcEEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGR-GTTDAYCVAKYG---QKWVRTRTIVDSFGPRWNEQYTWE-VFD---PCTVITVGVF 433 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~-g~~dpyv~v~~~---~~~~~T~~~~~t~~P~Wne~~~~~-v~~---~~~~l~i~v~ 433 (772)
.+.|.|.|++|+||+.+ |.. |.+||||++.++ ...+||+++++|+||+|||.|.|. +.. ....|.|+||
T Consensus 21 ~~~L~v~v~~a~~L~~~---d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~ 97 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAM---DEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTIL 97 (138)
T ss_dssp GTEEEEEEEEEESCCCC---BTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCC---CCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEE
Confidence 37999999999999987 553 889999999995 368999999999999999999996 553 2468999999
Q ss_pred eCCcCCCCCCCCCCcccEEEEEecCccccCc-eEeeeEeeeec
Q 004127 434 DNGHIHGQGGGGKDSRIGKVRIRLSTLETDR-VYTHSYPLLVL 475 (772)
Q Consensus 434 D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~-~~~~~~~L~~~ 475 (772)
|++.++ +|++||.+.|+|.++..+. ....|++|...
T Consensus 98 d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 98 SFDRFS------RDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EECSSC------CCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred ECCCCC------CCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 999875 8999999999999997653 44567888754
No 52
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.70 E-value=3.6e-17 Score=151.59 Aligned_cols=120 Identities=27% Similarity=0.401 Sum_probs=101.3
Q ss_pred CcccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEE-e
Q 004127 22 GSITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFS-K 95 (772)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~-v 95 (772)
...|.+.+++.|+ +..+.|.|+|++|+||+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|. +
T Consensus 13 ~~~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~ 90 (142)
T 2chd_A 13 TTLGALEFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGI 90 (142)
T ss_dssp -CCCEEEEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESC
T ss_pred CccceEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEccc
Confidence 3457788888887 45679999999999999999889999999999976 67899999999999999999998 5
Q ss_pred cc--CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 004127 96 DR--IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDR 148 (772)
Q Consensus 96 ~~--~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (772)
.. +....|.|+|||++.+ +|++||++.++|.++..+. ....|++|+.+
T Consensus 91 ~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~p 141 (142)
T 2chd_A 91 TEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ-----RKNFNICLERV 141 (142)
T ss_dssp CHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBCC
T ss_pred CHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC-----ccEEEEecccC
Confidence 32 2246899999999998 8999999999999997653 35678888754
No 53
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=5.1e-17 Score=151.89 Aligned_cols=116 Identities=31% Similarity=0.460 Sum_probs=99.8
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEeccC
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDRI 98 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~ 98 (772)
.|.+.+++.|. .+.|.|+|++|+||+..+..+.+||||++++.+ .+.+|++++++.||+|||+|.|.+...
T Consensus 19 ~G~l~~~l~~~----~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 94 (149)
T 1a25_A 19 RGRIYIQAHID----REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKES 94 (149)
T ss_dssp TCEEEEEEEES----SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSG
T ss_pred ceEEEEEEEec----CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccc
Confidence 46677777763 368999999999999999889999999999974 578999999999999999999998643
Q ss_pred -CCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 99 -QASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 99 -~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
....|.|+|||++.. +|++||++.++|.++.... ..+||+|.+.+
T Consensus 95 ~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 141 (149)
T 1a25_A 95 DKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 141 (149)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC------EEEEEECBCHH
T ss_pred cCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc------cCCeEEccCCC
Confidence 246899999999998 8999999999999997542 57899998753
No 54
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=5.1e-17 Score=152.54 Aligned_cols=105 Identities=24% Similarity=0.344 Sum_probs=90.9
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----CCEEEEeecccCCCCCeecceEEEEee--CCCcEEEEEEE
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIVDSFGPRWNEQYTWEVF--DPCTVITVGVF 433 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~t~~P~Wne~~~~~v~--~~~~~l~i~v~ 433 (772)
..+.|.|+|++|+||+.+ + .|.+||||++.+ +...+||+++++|+||+|||+|.|.+. +....|.|+||
T Consensus 25 ~~~~L~V~v~~a~~L~~~---d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISK---Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp SSSEEEEEEEEEESCCCC---S-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCC---C-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 348999999999999987 5 488999999998 234699999999999999999999984 45567999999
Q ss_pred eCCcCCCCCCCCC-CcccEEEEEecCcccc-CceEeeeEeeeec
Q 004127 434 DNGHIHGQGGGGK-DSRIGKVRIRLSTLET-DRVYTHSYPLLVL 475 (772)
Q Consensus 434 D~~~~~~~~~~~~-~~~lG~~~i~l~~l~~-~~~~~~~~~L~~~ 475 (772)
|++.++ + |++||.+.+++.++.. +.....||+|...
T Consensus 101 d~d~~~------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 101 NRASQS------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp ECCSSG------GGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred eCCCCC------CCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 999864 5 8999999999999985 7788999999874
No 55
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=8.1e-17 Score=150.52 Aligned_cols=103 Identities=25% Similarity=0.406 Sum_probs=91.5
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEEC-----CEEEEeecccCCCCCeecceEEEEeeCC--CcEEEEEEEeC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYG-----QKWVRTRTIVDSFGPRWNEQYTWEVFDP--CTVITVGVFDN 435 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~-----~~~~~T~~~~~t~~P~Wne~~~~~v~~~--~~~l~i~v~D~ 435 (772)
+.|.|+|++|+||+.+ +..|.+||||+|+++ ...+||+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCC---STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 6899999999999987 667899999999996 3579999999999999999999999763 46899999999
Q ss_pred CcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 436 GHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 436 ~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
+.++ +|++||.+.|++.++..+ ...+||+|...
T Consensus 108 d~~~------~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTS------RNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSSS------CCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CCCC------CCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 9875 899999999999999776 47899999764
No 56
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=1.7e-17 Score=153.79 Aligned_cols=104 Identities=25% Similarity=0.364 Sum_probs=91.3
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCE--------------EEEeecccCCCCCeecceEEEE-eeC---C
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQK--------------WVRTRTIVDSFGPRWNEQYTWE-VFD---P 424 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~--------------~~~T~~~~~t~~P~Wne~~~~~-v~~---~ 424 (772)
|.|.|+|++|+||+.+ |..|.+||||++.+++. .+||+++++|+||+|||.|.|. +.. .
T Consensus 18 ~~L~V~v~~a~~L~~~---d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~ 94 (142)
T 1rh8_A 18 GNLIIHILQARNLVPR---DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLM 94 (142)
T ss_dssp TEEEEEEEEEESCCCC---SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHT
T ss_pred CEEEEEEEEecCCCCC---CCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHcc
Confidence 7899999999999987 66789999999999752 4799999999999999999997 542 4
Q ss_pred CcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 425 CTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 425 ~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
...|.|+|||++.++ ++++||.+.|++.++..+.....||+|...
T Consensus 95 ~~~l~i~V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 95 KKTLEVTVWDYDRFS------SNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TCEEEEEEEEECSSS------CEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred CCEEEEEEEECCCCC------CCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 678999999999875 899999999999999877677899999753
No 57
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=5.6e-17 Score=150.30 Aligned_cols=120 Identities=28% Similarity=0.367 Sum_probs=100.5
Q ss_pred cccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEecc
Q 004127 23 SITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDR 97 (772)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~ 97 (772)
..|.+.+++.|.. ..+.|.|+|++|+||++.+..| +||||++++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 9 ~~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 9 PLGQIQLTIRHSS--QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp SSCEEEEEEEEET--TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CcceEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 3577888888764 4579999999999999999888 99999999953 57899999999999999999999843
Q ss_pred --CCCceEEEEEEecCCC-C--CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCC
Q 004127 98 --IQASVLEVLVKDKDVV-L--DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKG 150 (772)
Q Consensus 98 --~~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 150 (772)
+....|.|+|||++.+ + |++||++.++|.++.... ...+||+|.+..+
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSG 138 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCC
Confidence 2346899999999987 3 479999999999987542 3678999988653
No 58
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=4.4e-17 Score=155.84 Aligned_cols=116 Identities=25% Similarity=0.333 Sum_probs=99.9
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEecc
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDV-TGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDR 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~-~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~ 97 (772)
.|.+.+++.| ..+.|.|+|++|+||++.|. .|.+||||++++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 18 ~G~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (171)
T 2q3x_A 18 MGDIQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP 93 (171)
T ss_dssp CCEEEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC
T ss_pred ccEEEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC
Confidence 5778888888 36799999999999999985 68999999999975 37899999999999999999999854
Q ss_pred CCCceEEEEEE-ecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 98 IQASVLEVLVK-DKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 98 ~~~~~L~i~V~-d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
....|.|+|| |++.+ +|++||++.++|.++..+. ...+||+|.+..
T Consensus 94 -~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 94 -QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp -TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred -CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 4688999999 99998 8999999999999997543 367999998764
No 59
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=2.2e-16 Score=149.24 Aligned_cols=120 Identities=27% Similarity=0.328 Sum_probs=100.0
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC----
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ---- 397 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~---- 397 (772)
...|+|++.+... +..+.|.|+|++|+||+.+ |..|.+||||++.+++
T Consensus 9 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEEc-------------------------CCCCEEEEEEEEeeCCCCc---cCCCCCCeEEEEEEEeCCce
Confidence 3479999888742 2348999999999999987 6678999999999842
Q ss_pred -EEEEeecccCCCCCeecceEEEEeeCC---CcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCcc------------c
Q 004127 398 -KWVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTL------------E 461 (772)
Q Consensus 398 -~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l------------~ 461 (772)
..+||+++++|+||+|||+|.|.+... ...|.|+|||++.++ +|++||.+.|++..+ .
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~l~~~ 134 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLAN 134 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHHS
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC------CCceEEEEEECCCCCCcHHHHHHHHHHC
Confidence 468999999999999999999998753 467999999999875 899999999999954 2
Q ss_pred cCceEeeeEeeeec
Q 004127 462 TDRVYTHSYPLLVL 475 (772)
Q Consensus 462 ~~~~~~~~~~L~~~ 475 (772)
.+....+||+|...
T Consensus 135 ~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 135 PRRPIAQWHTLQVE 148 (159)
T ss_dssp TTCCEEEEEECBCH
T ss_pred CCCeeeeEEECcCc
Confidence 45677899998753
No 60
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=1e-16 Score=147.79 Aligned_cols=120 Identities=22% Similarity=0.313 Sum_probs=100.3
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEEEE-ec--
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVT-GSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFAFS-KD-- 96 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~-~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~-v~-- 96 (772)
.|.+.+++.|+. ..+.|.|+|++|+||+..+.. +.+||||++++.+ ++++|++++++.||+|||+|.|. +.
T Consensus 8 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 85 (138)
T 1ugk_A 8 LGTLFFSLEYNF--ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYT 85 (138)
T ss_dssp CCEEEEEEEEEG--GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCST
T ss_pred cEEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHH
Confidence 567788887764 457999999999999999974 8999999999964 68999999999999999999995 53
Q ss_pred cCCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 97 RIQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 97 ~~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
++....|.|+|||++.+ +|++||++.++|.++.... .....|++|...+
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~----~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 86 QIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSE----GKMLMNREIISGP 135 (138)
T ss_dssp TGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTT----CCEEEEEECBSSS
T ss_pred HhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCC----CcchhhhhhhcCC
Confidence 22457899999999998 8999999999999997653 2235678987654
No 61
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=2.1e-16 Score=145.72 Aligned_cols=103 Identities=21% Similarity=0.332 Sum_probs=85.9
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC-----EEEEeecccCCCCCeecceEEEEeeCCC---cEEEEEE
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIVDSFGPRWNEQYTWEVFDPC---TVITVGV 432 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~~P~Wne~~~~~v~~~~---~~l~i~v 432 (772)
..+.|.|.|++|+||+.+ +..|.+||||++.+++ ..++|++++++.||.|||+|.|.+.... ..|.|+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAM---DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp TTTEEEEEEEEEESCCCC---BTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCc---CCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 348999999999999987 6678999999999953 4689999999999999999999987543 6899999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
||++.++ +|++||.+.|++.++..+. .+|++|..
T Consensus 91 ~d~~~~~------~~~~lG~~~i~l~~~~~~~--~~W~~l~~ 124 (138)
T 3n5a_A 91 MDKDKLS------RNDVIGKIYLSWKSGPGEV--KHWKDMIA 124 (138)
T ss_dssp EECCSSS------CCEEEEEEEESSSSCHHHH--HHHHHHHH
T ss_pred EECCCCC------CCcEEEEEEEccccCChHH--HHHHHHHh
Confidence 9999875 8999999999999864322 45555543
No 62
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.69 E-value=1.1e-16 Score=148.23 Aligned_cols=104 Identities=24% Similarity=0.419 Sum_probs=91.1
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC-----EEEEeecccCCCCCeecceEEEE-eeCC---CcEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIVDSFGPRWNEQYTWE-VFDP---CTVITVGV 432 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t~~P~Wne~~~~~-v~~~---~~~l~i~v 432 (772)
.+.|.|+|++|+||+.+ +..|.+||||++++++ ..+||++++++.||+|||.|.|. +... ...|.|+|
T Consensus 28 ~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 104 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPM---DSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISV 104 (142)
T ss_dssp GTEEEEEEEEEESCCCC---CTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEE
T ss_pred CCEEEEEEEEecCCCCC---CCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEE
Confidence 37999999999999987 6678999999999965 67999999999999999999998 5432 36899999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
||++.++ +|++||.+.+++.++..+.....|++|..
T Consensus 105 ~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 105 CDEDKFG------HNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEECTTS------CEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EECCCCC------CCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 9999875 88999999999999998887778888753
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=3.7e-16 Score=148.88 Aligned_cols=106 Identities=17% Similarity=0.309 Sum_probs=91.2
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC----
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ---- 397 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~---- 397 (772)
...|+|.+.+... +..+.|.|.|++|+||+.+ +..|.+||||++++++
T Consensus 21 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 21 EERGKILVSLMYS-------------------------TQQGGLIVGIIRCVHLAAM---DANGYSDPFVKLWLKPDMGK 72 (166)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETC---
T ss_pred CccceEEEEEEEE-------------------------CCCCEEEEEEEEeECCCCc---cCCCCCCcEEEEEEECCCCc
Confidence 4478988887642 2348999999999999987 6678999999999965
Q ss_pred -EEEEeecccCCCCCeecceEEEEeeCC---CcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccc
Q 004127 398 -KWVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLE 461 (772)
Q Consensus 398 -~~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~ 461 (772)
..+||+++++|+||+|||+|.|.+... ...|.|+|||++.++ ++++||.+.|++.++.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK------SNDYIGGCQLGISAKG 134 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCH
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC------CCcEEEeEEEecccCC
Confidence 579999999999999999999999752 468999999999875 8999999999999863
No 64
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=149.17 Aligned_cols=119 Identities=28% Similarity=0.308 Sum_probs=99.5
Q ss_pred cccCCcceeeecCcCceeEEEEEEEEeecCCCC-CC------CCCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEE
Q 004127 23 SITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGK-DV------TGSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFA 92 (772)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~-~~------~~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~ 92 (772)
..|.+.+++.|+. ..+.|.|+|++|+||+.. +. .+.+||||++++.+ ++++|++++++.||+|||+|.
T Consensus 11 ~~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~ 88 (147)
T 2enp_A 11 QLGMLHFSTQYDL--LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYT 88 (147)
T ss_dssp CCCEEEEEEEEET--TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCE
T ss_pred cceEEEEEEEEcC--CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEE
Confidence 3677888988875 456999999999999984 43 35899999999973 578999999999999999999
Q ss_pred EEecc--CCCceEEEEEEecCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 004127 93 FSKDR--IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDR 148 (772)
Q Consensus 93 f~v~~--~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (772)
|.+.. +....|.|+|||++.+ +|++||++.++|.++.... ....|++|.+.
T Consensus 89 f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~ 142 (147)
T 2enp_A 89 FEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-----GGHWWKALIPS 142 (147)
T ss_dssp ECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-----CCCEEECCBCC
T ss_pred EEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-----CccEEEEeecC
Confidence 99853 2346899999999998 8999999999999996542 24689999865
No 65
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.68 E-value=1.8e-16 Score=149.92 Aligned_cols=121 Identities=30% Similarity=0.368 Sum_probs=100.0
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEecc-
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDR- 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~- 97 (772)
.|.+.+++.|.. ..+.|.|+|++|+||+..+..|.+||||++++.+ .+.+|+++++|.||+|||+|.|.+..
T Consensus 11 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 88 (159)
T 1tjx_A 11 LGDICFSLRYVP--TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 88 (159)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCeEEEEEEEcC--CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH
Confidence 577788887764 4569999999999999999889999999999963 46899999999999999999999853
Q ss_pred -CCCceEEEEEEecCCC-CCceeEEEEEEcccc----------CCCCCCCCCCCCeEEEeecCC
Q 004127 98 -IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEV----------PKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 98 -~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 149 (772)
+....|.|+|||++.+ +|++||.+.+++..+ .... .....+||+|....
T Consensus 89 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 89 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred HhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 2356899999999998 899999999999854 2111 23357899998653
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.67 E-value=2.9e-16 Score=149.61 Aligned_cols=103 Identities=26% Similarity=0.355 Sum_probs=91.0
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEecc-
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDR- 97 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~- 97 (772)
.|.+.+++.|.. ..+.|.|+|++|+||+..+..|.+||||++++++ .+++|+++++|.||+|||+|.|.+..
T Consensus 23 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 100 (166)
T 2cm5_A 23 RGKILVSLMYST--QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS 100 (166)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred cceEEEEEEEEC--CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH
Confidence 566777777764 5679999999999999999889999999999986 57899999999999999999999853
Q ss_pred -CCCceEEEEEEecCCC-CCceeEEEEEEcccc
Q 004127 98 -IQASVLEVLVKDKDVV-LDDLIGRVMFDLNEV 128 (772)
Q Consensus 98 -~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l 128 (772)
+....|.|+|||++.+ +|++||++.+++.++
T Consensus 101 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 101 DLAKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred hcCCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 2357999999999998 899999999999975
No 67
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=147.65 Aligned_cols=123 Identities=18% Similarity=0.181 Sum_probs=100.4
Q ss_pred cccceEEEEEEEcCCccccCCCcccCCCCCccccccccCCccEEEEEEEEecCCCCC-ccC---CCCCCcCcEEEEEEC-
Q 004127 322 KFSSRIHLRICLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILELGVLSAHGLTPM-KTK---DGRGTTDAYCVAKYG- 396 (772)
Q Consensus 322 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~g~~dpyv~v~~~- 396 (772)
...|+|++.+... +..+.|.|+|++|+||+.. +.. +..|.+||||+|++.
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 4478998888743 2348999999999999973 221 124689999999995
Q ss_pred --CEEEEeecccCCCCCeecceEEEEeeC---CCcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEe
Q 004127 397 --QKWVRTRTIVDSFGPRWNEQYTWEVFD---PCTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYP 471 (772)
Q Consensus 397 --~~~~~T~~~~~t~~P~Wne~~~~~v~~---~~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~ 471 (772)
...+||+++++++||+|||+|.|.+.. ....|.|+|||++.++ ++++||.+.|+|.++..+.....|++
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS------RHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC------CSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc------CCcEEEEEEEechhcCCCCCccEEEE
Confidence 357899999999999999999999874 2468999999999875 88999999999999977666678999
Q ss_pred eeec
Q 004127 472 LLVL 475 (772)
Q Consensus 472 L~~~ 475 (772)
|...
T Consensus 139 L~~~ 142 (147)
T 2enp_A 139 LIPS 142 (147)
T ss_dssp CBCC
T ss_pred eecC
Confidence 8754
No 68
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=1.7e-16 Score=146.32 Aligned_cols=103 Identities=30% Similarity=0.471 Sum_probs=89.7
Q ss_pred cCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeeecCCCCCeeccEEEEEeccC-
Q 004127 25 TGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-----YKGTTKHFEKKSNPEWNQCFAFSKDRI- 98 (772)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~Wne~f~f~v~~~- 98 (772)
|.+.+++.|. +..+.|.|+|++|+||+..+..|.+||||++++.+ .+.+|++++++.||+|||+|.|.+...
T Consensus 3 G~l~~sl~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 3 GELLLSLCYN--PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred cEEEEEEEEc--CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 5677787776 45579999999999999999889999999999975 478999999999999999999998542
Q ss_pred -CCceEEEEEEecCCC-CCceeEEEEEEccccC
Q 004127 99 -QASVLEVLVKDKDVV-LDDLIGRVMFDLNEVP 129 (772)
Q Consensus 99 -~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~ 129 (772)
....|.|+|||++.+ +|++||++.+++.++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 246899999999998 8999999999998753
No 69
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.66 E-value=1e-15 Score=143.67 Aligned_cols=102 Identities=18% Similarity=0.168 Sum_probs=81.6
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE--CCE---EEEeecccCCCCCeecceEEEEeeCC---CcEEEEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY--GQK---WVRTRTIVDSFGPRWNEQYTWEVFDP---CTVITVGVF 433 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--~~~---~~~T~~~~~t~~P~Wne~~~~~v~~~---~~~l~i~v~ 433 (772)
.+.|.|.|++|+||+.+ +..|.+||||+|.+ ++. .+||+++++|+||+|||+|.|.+... ...|.|+||
T Consensus 29 ~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~ 105 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKS---DVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVL 105 (153)
T ss_dssp TTEEEEEEEEEESCC---------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEE
T ss_pred CCEEEEEEEEeECCCCc---CCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEE
Confidence 48999999999999987 66688999999999 443 57999999999999999999998764 368999999
Q ss_pred eCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 434 DNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 434 D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
|++.++ ++++||.+.|++.+. +....+|++|..
T Consensus 106 d~d~~~------~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 106 DSERGS------RNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp ECCTTS------CCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred eCCCCC------CCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 999865 899999999999983 333456666654
No 70
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.65 E-value=5.2e-16 Score=145.73 Aligned_cols=102 Identities=30% Similarity=0.388 Sum_probs=83.7
Q ss_pred ccCCcceeeecCcCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--Ce---eeeeeeecCCCCCeeccEEEEEeccC
Q 004127 24 ITGDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLG--NY---KGTTKHFEKKSNPEWNQCFAFSKDRI 98 (772)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~--~~---~~kT~~~~~t~nP~Wne~f~f~v~~~ 98 (772)
.|.+.+++.|.- ..+.|.|+|++|+||+..+..|.+||||++++. +. +++|+++++|.||+|||+|.|.+...
T Consensus 16 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 16 RGELLVSLCYQS--TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred ccEEEEEEEEcC--CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 577788877764 456999999999999999988999999999994 32 67999999999999999999998643
Q ss_pred --CCceEEEEEEecCCC-CCceeEEEEEEccc
Q 004127 99 --QASVLEVLVKDKDVV-LDDLIGRVMFDLNE 127 (772)
Q Consensus 99 --~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~ 127 (772)
....|.|+|||++.+ +|++||++.+++..
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 347899999999998 89999999999987
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.63 E-value=1.7e-15 Score=134.63 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=101.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeec-CCCCCeeccEEEEEeccC--CCceEEEEEEecCCC-CCc
Q 004127 41 YLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFE-KKSNPEWNQCFAFSKDRI--QASVLEVLVKDKDVV-LDD 116 (772)
Q Consensus 41 ~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~--~~~~L~i~V~d~~~~-~d~ 116 (772)
-|+|+|.+|.||+ |++|||+++.+.+.+++|++++ ++.||+|||.|.|++..+ .++.|.|.|||++++ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 4899999999999 5789999999999999999997 799999999999998532 468999999999999 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeeec
Q 004127 117 LIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGTQ 167 (772)
Q Consensus 117 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~~ 167 (772)
+||++.++|+++..... ...+-+|.+.+++... |+|.+.+.|.+.
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~~~-a~I~l~l~Y~pp 141 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAIIK-TSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCEEE-EEEEEEEEEEET
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCccc-cEEEEEEEecCC
Confidence 99999999999987632 2356788888877777 999999998763
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=4e-15 Score=135.08 Aligned_cols=98 Identities=28% Similarity=0.402 Sum_probs=78.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeec-CCCCCeeccEEEEEeccCCCceEEEEEEecCCC-CCc
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFE-KKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV-LDD 116 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~-~d~ 116 (772)
++.|.|+|++|+++.. .|.+||||++. ++..+|++++ +|.||+|||+|.|.+... ...|.|+|||++ . +|+
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCEE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCCC
Confidence 5799999999998853 57899999999 3444565554 799999999999999864 567999999999 7 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCeEEEee
Q 004127 117 LIGRVMFDLNEVPKRIPPDSPLAPQWYRLE 146 (772)
Q Consensus 117 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 146 (772)
+||++.++|.++..... .....|.++.
T Consensus 77 ~iG~~~i~l~~l~~~~~---~~~~~~~~~~ 103 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSNE---EGPGEWLTLD 103 (131)
T ss_dssp EEEEEEEEGGGSCBCSS---CCCCEEEECB
T ss_pred eEEEEEEEHHHhhhcCC---CCccccEEcc
Confidence 99999999999875431 1223565554
No 73
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=4.7e-15 Score=134.60 Aligned_cols=86 Identities=26% Similarity=0.405 Sum_probs=73.9
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeeccc-CCCCCeecceEEEEeeCCCcEEEEEEEeCCcCCC
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIV-DSFGPRWNEQYTWEVFDPCTVITVGVFDNGHIHG 440 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~~~ 440 (772)
.+.|.|+|++|++|+. .|.+||||+++ .+..||++++ ++.||+|||+|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4799999999998852 36899999999 3345676665 699999999999999988788999999999 65
Q ss_pred CCCCCCCcccEEEEEecCcccc
Q 004127 441 QGGGGKDSRIGKVRIRLSTLET 462 (772)
Q Consensus 441 ~~~~~~~~~lG~~~i~l~~l~~ 462 (772)
+|++||++.|+|.++..
T Consensus 74 -----~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 74 -----WDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp -----CEEEEEEEEEEGGGSCB
T ss_pred -----CCCeEEEEEEEHHHhhh
Confidence 89999999999999853
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.59 E-value=8.2e-15 Score=130.22 Aligned_cols=119 Identities=15% Similarity=0.236 Sum_probs=103.1
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeeccc-CCCCCeecceEEEEeeC---CCcEEEEEEEeCCcC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIV-DSFGPRWNEQYTWEVFD---PCTVITVGVFDNGHI 438 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~~P~Wne~~~~~v~~---~~~~l~i~v~D~~~~ 438 (772)
-.|+|.|.+|.||+ |++|||+++.+-+.++||++++ .+.||+|||.|.|++.- ....|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 37899999999997 4799999999999999999998 59999999999999984 478999999999998
Q ss_pred CCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEeecch
Q 004127 439 HGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFTCSSL 497 (772)
Q Consensus 439 ~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~~~ 497 (772)
+ ++.+||++.++|.++..+.....+-+|.+.+. ....++|.+.++|.|..+
T Consensus 93 ~------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~--~~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 93 F------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNN--AIIKTSLSMEVRYQAADG 143 (144)
T ss_dssp S------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTS--CEEEEEEEEEEEEEETTC
T ss_pred c------CCCEEEEEEEEhHHhccCCeEEEeecccCCCC--CccccEEEEEEEecCCCC
Confidence 7 99999999999999987777777788887643 223489999999988543
No 75
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=1.3e-14 Score=137.19 Aligned_cols=117 Identities=22% Similarity=0.348 Sum_probs=88.6
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeeccc-CCCCCeecceEEEEeeCCCcEEEEEEEeCCcCCC
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIV-DSFGPRWNEQYTWEVFDPCTVITVGVFDNGHIHG 440 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~-~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~~~~ 440 (772)
.+.|.|+|++|++|+. .|.+||||+|+ .+..||++++ ++.||+|||+|.|.+.+....|.|+|||+| ++
T Consensus 13 ~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 82 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 82 (167)
T ss_dssp CCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS-
T ss_pred eEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC-
Confidence 5799999999998842 37899999999 3346787776 699999999999999988888999999999 65
Q ss_pred CCCCCCCcccEEEEEecCccccC------ceEeeeEeeeecCCC--Cc--ccccEEEEEEEEe
Q 004127 441 QGGGGKDSRIGKVRIRLSTLETD------RVYTHSYPLLVLHPS--GV--RKMGEVQLAVRFT 493 (772)
Q Consensus 441 ~~~~~~~~~lG~~~i~l~~l~~~------~~~~~~~~L~~~~~~--g~--~~~G~i~l~~~f~ 493 (772)
+|++||++.|+|.++... .+...||.+.....+ |. ...|.+.++++|.
T Consensus 83 -----~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 83 -----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp -----CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred -----CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 899999999999998542 233455554432211 11 1245577777774
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=1.9e-14 Score=136.03 Aligned_cols=119 Identities=21% Similarity=0.256 Sum_probs=87.6
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeec-CCCCCeeccEEEEEeccCCCceEEEEEEecCCC-CCc
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFE-KKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV-LDD 116 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~-~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~-~d~ 116 (772)
++.|+|+|++|+++. ..|.+||||+++ .+..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ + +|+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCCE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCCc
Confidence 679999999999884 257899999999 4455676665 699999999999999864 567999999999 7 999
Q ss_pred eeEEEEEEccccCCCCCCC-CCCCCeEEEeecCCCC------ceeeeEEEEEEEee
Q 004127 117 LIGRVMFDLNEVPKRIPPD-SPLAPQWYRLEDRKGD------KVKTGELMLAVWMG 165 (772)
Q Consensus 117 ~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~~------~~~~G~l~l~~~~~ 165 (772)
+||++.|+|.++....... ....+.|+.+..+.|+ ... |.+.+.+.+.
T Consensus 86 ~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~-~~lll~~~~e 140 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTF-HRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEE-EEEEEEEEEE
T ss_pred eEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEcccc-ceEEEEEEee
Confidence 9999999999987543111 0122345554444332 122 5566666654
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=1.4e-14 Score=164.15 Aligned_cols=119 Identities=26% Similarity=0.458 Sum_probs=103.2
Q ss_pred CCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeCC-CcEEEEEEEeCCcC
Q 004127 360 PSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFDP-CTVITVGVFDNGHI 438 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~~-~~~l~i~v~D~~~~ 438 (772)
...|.|.|+|++|+||+.+ |..|.+||||++.+++..++|+++++|+||.|||.|.|.+..+ ...|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCC---CCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4568999999999999987 6779999999999999999999999999999999999999875 46899999999987
Q ss_pred CCCCCCCCCcccEEEEEecCccccCce----EeeeEeeeecCCCCcccccEEEEEEEEe
Q 004127 439 HGQGGGGKDSRIGKVRIRLSTLETDRV----YTHSYPLLVLHPSGVRKMGEVQLAVRFT 493 (772)
Q Consensus 439 ~~~~~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 493 (772)
+ +|++||.+.+++.++..+.. ...|++|.+. ..|+|++++.+.
T Consensus 461 ~------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp S------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred C------CCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 5 89999999999999976543 6789988642 459999888874
No 78
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=3.5e-14 Score=158.12 Aligned_cols=113 Identities=21% Similarity=0.279 Sum_probs=97.1
Q ss_pred CCccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEEEEeecccCCCCCeecceEEEEeeC--CCcEEEEEEEeCCc
Q 004127 360 PSIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKWVRTRTIVDSFGPRWNEQYTWEVFD--PCTVITVGVFDNGH 437 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~~~T~~~~~t~~P~Wne~~~~~v~~--~~~~l~i~v~D~~~ 437 (772)
...|.|.|.|++|+||+. |..|++||||+|.++++.+||+++++++||+|||.|.|.+.+ ..+.|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 446899999999999986 566899999999999999999999999999999999998753 57889999999998
Q ss_pred CCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEeec
Q 004127 438 IHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFTCS 495 (772)
Q Consensus 438 ~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~~ 495 (772)
.+ +||+||.+.++|.. | ....|++|. .|.|++.+.+++.
T Consensus 467 ~~------~dD~LG~~~~~L~~---g-~~~~~~~l~---------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 467 GW------DDDLLGSCDRSPHS---G-FHEVTCELN---------HGRVKFSYHAKCL 505 (540)
T ss_dssp SS------CCEEEEEEEECCCS---E-EEEEEEECS---------SSEEEEEEEEEEC
T ss_pred CC------CCCEEEEEEEEeeC---C-cEEEEEEcC---------CeEEEEEEEEEEC
Confidence 65 88999999999883 3 356777752 3999988888774
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=1.7e-14 Score=163.42 Aligned_cols=122 Identities=23% Similarity=0.387 Sum_probs=104.7
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCC-CC
Q 004127 37 EQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV-LD 115 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~-~d 115 (772)
...+.|.|+|++|+||++.|..|.+||||++.+++++.+|+++++|.||+|||+|.|.+..+....|.|+|||.+.+ +|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 46689999999999999999999999999999999999999999999999999999999877778899999999998 89
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEe
Q 004127 116 DLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWM 164 (772)
Q Consensus 116 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (772)
++||++.+++.++..+..... ....|++|..... |+|.+.+.+
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~~~~~-----G~i~l~~~l 506 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKG-PMTRRLLLHEVPT-----GEVWVRFDL 506 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHC-SCCEEEECBSSSS-----CEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCC-ceeeeecCCCCCC-----ceEEEEEEE
Confidence 999999999999975422111 2568999986532 888888765
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.54 E-value=3.7e-14 Score=157.94 Aligned_cols=112 Identities=24% Similarity=0.262 Sum_probs=96.6
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeeecCCCCCeeccEEEEEec-cCCCceEEEEEEecCCC-C
Q 004127 37 EQMQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNYKGTTKHFEKKSNPEWNQCFAFSKD-RIQASVLEVLVKDKDVV-L 114 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~-~~~~~~L~i~V~d~~~~-~ 114 (772)
..++.|.|+|++|+||+. |..|.+||||++++++++.||+++++++||+|||+|.|.+. ....+.|+|+|||+|.. +
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 347899999999999998 98999999999999999999999999999999999999864 33578899999999998 8
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeee
Q 004127 115 DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGT 166 (772)
Q Consensus 115 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (772)
||+||++.++|.. + . ...|++|.. |+|.+++.+..
T Consensus 470 dD~LG~~~~~L~~---g-----~-~~~~~~l~~--------G~l~~~~~~~c 504 (540)
T 3nsj_A 470 DDLLGSCDRSPHS---G-----F-HEVTCELNH--------GRVKFSYHAKC 504 (540)
T ss_dssp CEEEEEEEECCCS---E-----E-EEEEEECSS--------SEEEEEEEEEE
T ss_pred CCEEEEEEEEeeC---C-----c-EEEEEEcCC--------eEEEEEEEEEE
Confidence 8999999999872 2 1 457888642 88888887654
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.9e-13 Score=156.01 Aligned_cols=120 Identities=22% Similarity=0.374 Sum_probs=104.1
Q ss_pred ceeEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeeeeeecCC-CCCeeccEEEEEeccCCCceEEEEEEe
Q 004127 38 QMQYLYVRVVKAKDLPGKDV--TGSCDPYVEVKLGN-----YKGTTKHFEKK-SNPEWNQCFAFSKDRIQASVLEVLVKD 109 (772)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~~~--~~~~dpyv~v~~~~-----~~~kT~~~~~t-~nP~Wne~f~f~v~~~~~~~L~i~V~d 109 (772)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+ .+.||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 45799999999999998873 68899999999955 57899999887 999999999999976655789999999
Q ss_pred cCCC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEee
Q 004127 110 KDVV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMG 165 (772)
Q Consensus 110 ~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (772)
++.+ +|++||++.++|..|..+ .+|++|.+..|.....|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9998 999999999999999654 36999999888765448899888763
No 82
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.47 E-value=4.9e-15 Score=164.94 Aligned_cols=123 Identities=19% Similarity=0.326 Sum_probs=20.9
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCE-EEEeecccCC---CCCeecceEEEEeeCCCcEEEEEEEeC-C
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQK-WVRTRTIVDS---FGPRWNEQYTWEVFDPCTVITVGVFDN-G 436 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~-~~~T~~~~~t---~~P~Wne~~~~~v~~~~~~l~i~v~D~-~ 436 (772)
.+.|+|+|++|+||+++ | ||||++.+++. +.||+++++| +||+|||+|.|.+......|.|+|||+ |
T Consensus 10 ~~~L~V~VieAk~L~~~---d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPK---K-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EECC-----------------------------------------------------CCEECC-----------------
T ss_pred ccEEEEEEEEcCCcCCC---C-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 37899999999999876 3 99999999876 5799999999 999999999999766568899999994 4
Q ss_pred cCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCC---------------------CCcccccEEEEEEEEeec
Q 004127 437 HIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHP---------------------SGVRKMGEVQLAVRFTCS 495 (772)
Q Consensus 437 ~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~i~l~~~f~~~ 495 (772)
.. .+.++|++||++.|++.++..+....+||+|.+... +|.+..|.|+|+++|++.
T Consensus 82 ~~---~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 82 KK---RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred cc---ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 20 001289999999999999998888899999965432 122346999999999763
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=5.4e-13 Score=152.19 Aligned_cols=121 Identities=19% Similarity=0.308 Sum_probs=99.6
Q ss_pred CccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC-----EEEEeecccCC-CCCeecceEEEEeeCCC-cEEEEEEE
Q 004127 361 SIGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIVDS-FGPRWNEQYTWEVFDPC-TVITVGVF 433 (772)
Q Consensus 361 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~-----~~~~T~~~~~t-~~P~Wne~~~~~v~~~~-~~l~i~v~ 433 (772)
..+.|.|+|++|++|+.++. +..|.+||||+|.+.+ .+.||++++++ .||+|||+|.|.+..+. ..|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 45899999999999998731 1367899999999943 67899999997 99999999999998763 68999999
Q ss_pred eCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcc-cccEEEEEEEEe
Q 004127 434 DNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVR-KMGEVQLAVRFT 493 (772)
Q Consensus 434 D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~f~ 493 (772)
|+|.++ ++++||++.|+|..|..|. +|++|.+.. |.. ..|+|.+.+.|+
T Consensus 574 D~D~~~------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSS------KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EcCCCC------CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEEE
Confidence 999875 8999999999999998763 689998753 332 347777777763
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.42 E-value=3.6e-13 Score=154.46 Aligned_cols=107 Identities=26% Similarity=0.450 Sum_probs=95.0
Q ss_pred CceeEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeeeeeecCCCCCeeccEEEEEeccCCCceEEEEEEec
Q 004127 37 EQMQYLYVRVVKAKDLPG---KDVTGSCDPYVEVKLGN---YKGTTKHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDK 110 (772)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~---~~~~~~~dpyv~v~~~~---~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~ 110 (772)
.+.+.|.|+|++|++|+. .|..|.+||||++++++ .++||++++++.||+|||+|.|.+.......|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999998 77788999999999995 678999999999999999999999876678999999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecC
Q 004127 111 DVVLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDR 148 (772)
Q Consensus 111 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (772)
+.+.|++||++.++|.++..+. ....|++|.+.
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~-----~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV 127 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTC-----CCCEEEEETTT
T ss_pred CCCCCceeEEEEEEHHHcCCCC-----ceEEEEecCCC
Confidence 9878999999999999996553 25689999754
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.39 E-value=3.4e-13 Score=154.65 Aligned_cols=105 Identities=19% Similarity=0.264 Sum_probs=93.5
Q ss_pred CCccEEEEEEEEecCCCC---CccCCCCCCcCcEEEEEECC---EEEEeecccCCCCCeecceEEEEeeC-CCcEEEEEE
Q 004127 360 PSIGILELGVLSAHGLTP---MKTKDGRGTTDAYCVAKYGQ---KWVRTRTIVDSFGPRWNEQYTWEVFD-PCTVITVGV 432 (772)
Q Consensus 360 ~~~g~l~v~v~~a~~L~~---~~~~~~~g~~dpyv~v~~~~---~~~~T~~~~~t~~P~Wne~~~~~v~~-~~~~l~i~v 432 (772)
.+.+.|.|+|++|++|+. + |..|++||||+|++++ ..+||+++++++||+|||+|.|.+.. ....|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~---D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFG---DMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHH---HHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCcccc---CCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 455899999999999998 6 5568899999999974 67999999999999999999999987 467899999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeee
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLV 474 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~ 474 (772)
||+|.+ .|++||++.|++.++..+....+|++|..
T Consensus 92 ~D~D~~-------~ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 92 MDANYV-------MDETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECCSS-------SCEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EECCCC-------CCceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 999975 38999999999999988887889999953
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.24 E-value=7.4e-13 Score=147.37 Aligned_cols=100 Identities=20% Similarity=0.339 Sum_probs=13.2
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeeeeeecCC---CCCeeccEEEEEeccCCCceEEEEEEec-C--
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNY-KGTTKHFEKK---SNPEWNQCFAFSKDRIQASVLEVLVKDK-D-- 111 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~-~~kT~~~~~t---~nP~Wne~f~f~v~~~~~~~L~i~V~d~-~-- 111 (772)
.+.|+|+|++|+||+++| ||||+++++++ ..||+++++| .||+|||+|.|.+... ...|.|+|||. +
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 468999999999999876 99999999985 6799999999 9999999999997543 58899999995 4
Q ss_pred -CC-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 112 -VV-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 112 -~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
.. +|++||.+.|++.++..+. ...+||+|..+.
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~ 118 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCC
Confidence 24 8999999999999997653 357899996543
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=135.08 Aligned_cols=112 Identities=17% Similarity=0.265 Sum_probs=94.0
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeeecC-CCCCeecc-EEEEE-eccCCCceEEEEEEec
Q 004127 40 QYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN------YKGTTKHFEK-KSNPEWNQ-CFAFS-KDRIQASVLEVLVKDK 110 (772)
Q Consensus 40 ~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~------~~~kT~~~~~-t~nP~Wne-~f~f~-v~~~~~~~L~i~V~d~ 110 (772)
..|.|+|++|++|+.. .+||||+|.+.+ .++||+++++ +.||+||| +|.|. +..+....|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 3799999999999853 689999999975 3579999975 59999999 69998 6555557899999998
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeee
Q 004127 111 DVVLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGT 166 (772)
Q Consensus 111 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (772)
+ +++||++.++|..|..+ .++++|.+..|.....|+|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999998654 367899999888754599999998864
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=2.1e-10 Score=133.13 Aligned_cols=112 Identities=18% Similarity=0.297 Sum_probs=94.9
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeeeeeecC-CCCCeeccE-EEEE-eccCCCceEEEEEEe
Q 004127 40 QYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN-------YKGTTKHFEK-KSNPEWNQC-FAFS-KDRIQASVLEVLVKD 109 (772)
Q Consensus 40 ~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~-------~~~kT~~~~~-t~nP~Wne~-f~f~-v~~~~~~~L~i~V~d 109 (772)
+.|.|+|++|++|+.. .+||||+|.+.+ .++||+++++ +.||+|||+ |.|. +..+.-..|+|+|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 6899999999999853 689999999976 4679999975 699999998 9998 755545789999999
Q ss_pred cCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEeee
Q 004127 110 KDVVLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMGT 166 (772)
Q Consensus 110 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~~ 166 (772)
++ +++||++.++|..|..+ .++++|.+..|+....++|.+.+.+..
T Consensus 726 ~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 726 EN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp TT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 85 78999999999999754 368899999888765599999998764
No 89
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.13 E-value=2.9e-10 Score=132.86 Aligned_cols=111 Identities=22% Similarity=0.283 Sum_probs=92.0
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeee-eecC-CCCCeecc-EEEE-EeccCCCceEEEEEE
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGN------YKGTTK-HFEK-KSNPEWNQ-CFAF-SKDRIQASVLEVLVK 108 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~------~~~kT~-~~~~-t~nP~Wne-~f~f-~v~~~~~~~L~i~V~ 108 (772)
.+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| +|.| .+..+.-..|+|+||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4689999999999985 4689999999953 357899 8864 68999999 7999 776554568999999
Q ss_pred ecCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEe
Q 004127 109 DKDVVLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWM 164 (772)
Q Consensus 109 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 164 (772)
|++ +++||.+.++|..|..+ .+|++|.+..|.....+.|.+.+.+
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEE
Confidence 986 89999999999999643 4689999888876555888888866
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=6.8e-11 Score=137.87 Aligned_cols=105 Identities=33% Similarity=0.548 Sum_probs=91.8
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeeecCCCCCeeccEEEEEeccC-CCceEEEEEEecCC
Q 004127 39 MQYLYVRVVKAKDLPGKDVTGSCDPYVEVKL-----GNYKGTTKHFEKKSNPEWNQCFAFSKDRI-QASVLEVLVKDKDV 112 (772)
Q Consensus 39 ~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~-----~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~~L~i~V~d~~~ 112 (772)
.+.|.|+|++|++|.+.|..|.+||||++++ ...+.+|++++++.||+|||+|.|.+... ....|.|+|||.+.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4689999999999999999999999999999 33578999999999999999999998542 34569999999999
Q ss_pred C-CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCC
Q 004127 113 V-LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRK 149 (772)
Q Consensus 113 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (772)
. +|++||++.+++.++.... ...|+.|....
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred ccccccccccccchhhhccCC------cccceeecccc
Confidence 9 9999999999999997542 47899998764
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.11 E-value=8.7e-11 Score=136.94 Aligned_cols=103 Identities=25% Similarity=0.438 Sum_probs=91.1
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE-----CCEEEEeecccCCCCCeecceEEEEeeC--CCcEEEEEEEeC
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIVDSFGPRWNEQYTWEVFD--PCTVITVGVFDN 435 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----~~~~~~T~~~~~t~~P~Wne~~~~~v~~--~~~~l~i~v~D~ 435 (772)
+.|.|.|++|++|..+ |..|.+||||++.+ +..+.||+++++|+||+|||.|.|.+.. ....|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~---d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCC---STTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCC---CcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 6899999999999998 77799999999998 4456899999999999999999999874 356799999999
Q ss_pred CcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeec
Q 004127 436 GHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVL 475 (772)
Q Consensus 436 ~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 475 (772)
|.++ +|++||.+.++++++.... ...|++|.+.
T Consensus 249 d~~~------~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 249 DLTS------RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp CSSS------CCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred cccc------ccccccccccchhhhccCC-cccceeeccc
Confidence 9876 8999999999999997765 4899999764
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=1.3e-09 Score=126.36 Aligned_cols=111 Identities=19% Similarity=0.293 Sum_probs=88.0
Q ss_pred ccEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC-------EEEEeecccC-CCCCeecce-EEEE-eeCC-CcEEEE
Q 004127 362 IGILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ-------KWVRTRTIVD-SFGPRWNEQ-YTWE-VFDP-CTVITV 430 (772)
Q Consensus 362 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~-------~~~~T~~~~~-t~~P~Wne~-~~~~-v~~~-~~~l~i 430 (772)
.+.|.|+|++|++|+. ..+||||+|.+.+ +++||+++++ +.||+|||+ |.|. |..+ ...|+|
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 3789999999999974 2589999999854 5789999986 699999998 9998 7654 468999
Q ss_pred EEEeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEe
Q 004127 431 GVFDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFT 493 (772)
Q Consensus 431 ~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~ 493 (772)
+|||++ +++||++.++|+.|..| -++.||.+...... ..++|.+.+.+.
T Consensus 722 ~V~D~d----------ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~-~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEEN----------GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPL-GLASVFAHIVAK 770 (816)
T ss_dssp EEEETT----------SCEEEEEEEESTTCCCE---EEEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EEEecC----------CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCC-CceEEEEEEEEE
Confidence 999963 58999999999999887 35789987532221 236777777664
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.01 E-value=9.5e-10 Score=128.25 Aligned_cols=123 Identities=18% Similarity=0.257 Sum_probs=92.6
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECC------EEEEeecccC-CCCCeecc-eEEEE-eeCC-CcEEEEEE
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIVD-SFGPRWNE-QYTWE-VFDP-CTVITVGV 432 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~------~~~~T~~~~~-t~~P~Wne-~~~~~-v~~~-~~~l~i~v 432 (772)
..|.|+|++|++|+. ..+||||+|.+.+ .++||+++++ +.||+||| .|.|. |..+ ...|.|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 479999999999974 2589999999854 2479999986 59999999 69998 6554 46899999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCccccCceEeeeEeeeecCCCCcccccEEEEEEEEe---ecchhHHhhhccC
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTLETDRVYTHSYPLLVLHPSGVRKMGEVQLAVRFT---CSSLINMLHMYSQ 506 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~---~~~~~~~~~~~~~ 506 (772)
||+| +++||++.|+|..|..| -++.||.+...... ..|+|.+.+.+. |...-.++.+...
T Consensus 798 ~D~d----------ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l-~~atLfv~i~~~~~~~~~~~~~~~~l~~ 860 (885)
T 3ohm_B 798 FEEG----------GKFVGHRILPVSAIRSG---YHYVCLRNEANQPL-CLPALLIYTEASDYIPDDHQDYAEALIN 860 (885)
T ss_dssp EETT----------TEEEEEEEEETTTCCCE---EEEEEEECTTSCEE-EEEEEEEEEEEEECCCGGGHHHHHHHHC
T ss_pred EcCC----------ccEEeeEEEEHHHcCCC---ceEEEecCCCCCcc-CceEEEEEEEEEecCCccHHHHHHHHhC
Confidence 9964 58999999999999876 35688877532221 357888888775 3333344444443
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.89 E-value=6.6e-09 Score=121.43 Aligned_cols=97 Identities=24% Similarity=0.371 Sum_probs=80.7
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCccEEEEEECC------eeeeec-cccCCCCCCceec-eeEE-EeeCCCCCcEEEEE
Q 004127 200 KLWYVRVNIIEAQDLLPSDKSRFPEVFVKAILGN------QASRTR-ISPSKTINPMWNE-DLMF-VAAEPFEEPLILTV 270 (772)
Q Consensus 200 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~------~~~kT~-~~~~~t~nP~wne-~f~f-~~~~~~~~~l~i~V 270 (772)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++++.||.||| .|.| .+..+....|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 35689999999999985 4689999999943 367899 8876479999999 6999 88766667899999
Q ss_pred EEccCCCCCceeEEEEEeccccccccCCCCCCceeEEcccC
Q 004127 271 EDRVAPNKDEVLGKCLIPLQAVQRRLDHKPVNTRWFNLEKH 311 (772)
Q Consensus 271 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~w~~L~~~ 311 (772)
||++ +++||++.++|..|.. ..+|++|...
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~-------G~r~v~L~~~ 781 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNS-------GYHHLCLHSE 781 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCC-------EEEEEEEECT
T ss_pred EEeC----CCccceEeeehhhcCC-------CcEEEeccCC
Confidence 9985 7899999999999863 4578888764
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.85 E-value=1.2e-08 Score=87.74 Aligned_cols=114 Identities=15% Similarity=0.274 Sum_probs=86.8
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----eeee-eeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCCC
Q 004127 40 QYLYVRVVKAKDLPGKDVTGSCDPYVEVKLGNY----KGTT-KHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVVL 114 (772)
Q Consensus 40 ~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~----~~kT-~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~~ 114 (772)
..|||.+.++.--+........||||.+.+... ..+| ...++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 478998877764333233457899999999863 3366 777889999999999999887 6899999997654
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEee
Q 004127 115 DDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMG 165 (772)
Q Consensus 115 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (772)
++++.+++.+.+|..+-.........|++|++. |+|.+.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~-------Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-------AKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS-------CEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEe
Confidence 899999999999984410001235789999885 8998888663
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.78 E-value=1.8e-08 Score=87.88 Aligned_cols=114 Identities=19% Similarity=0.406 Sum_probs=88.0
Q ss_pred eEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----eeee-eeecCCCCCeeccEEEEEeccCCCceEEEEEEecCCC
Q 004127 40 QYLYVRVVKAKDLPGKD-VTGSCDPYVEVKLGNY----KGTT-KHFEKKSNPEWNQCFAFSKDRIQASVLEVLVKDKDVV 113 (772)
Q Consensus 40 ~~L~V~v~~a~~L~~~~-~~~~~dpyv~v~~~~~----~~kT-~~~~~t~nP~Wne~f~f~v~~~~~~~L~i~V~d~~~~ 113 (772)
+.|||.+.++.--+... .....||||.|.+... ..+| ..+++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 47899998876544332 2346899999999863 3677 677889999999999999887 6899999997654
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCCceeeeEEEEEEEee
Q 004127 114 LDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGDKVKTGELMLAVWMG 165 (772)
Q Consensus 114 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 165 (772)
+|++.+++.+.+|..+-.........|++|++. |+|.+.+.+.
T Consensus 87 --~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~-------Gkl~v~i~~~ 129 (138)
T 2enj_A 87 --DLISETTVELYSLAERCRKNNGKTEIWLELKPQ-------GRMLMNARYF 129 (138)
T ss_dssp --SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS-------CEEEEEEEEC
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEE
Confidence 899999999999984400001235789999885 9999998774
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.66 E-value=3.3e-07 Score=78.87 Aligned_cols=108 Identities=14% Similarity=0.254 Sum_probs=82.2
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEE----EEe-ecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCc
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGH 437 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~----~~T-~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~ 437 (772)
+.|+|.+.++.--..+ ......||||.|.++... .+| .+.++|..|.|||+|.-.|.+ ...|.|.||+.
T Consensus 6 ~flRi~~~~~~~~~~~---~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~-- 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQ---AEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRA-- 79 (126)
T ss_dssp CEEEEEEEEEECSSCC---CSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEE--
T ss_pred ccEEeeeccccccccC---CccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcC--
Confidence 5677777665532211 112358999999886544 366 778889999999999998764 67799999963
Q ss_pred CCCCCCCCCCcccEEEEEecCccc-----cCceEeeeEeeeecCCCCcccccEEEEEEEE
Q 004127 438 IHGQGGGGKDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLHPSGVRKMGEVQLAVRF 492 (772)
Q Consensus 438 ~~~~~~~~~~~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f 492 (772)
..++++.+.|++.+|. .+...+.|..|.. .|+|++.+++
T Consensus 80 --------a~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--------~Gkl~~~i~~ 123 (126)
T 1yrk_A 80 --------AEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--------QAKVLMSVQY 123 (126)
T ss_dssp --------TTEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--------SCEEEEEEEE
T ss_pred --------CCCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 3389999999999995 4567889999874 4999999886
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.60 E-value=3.3e-07 Score=79.92 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=83.3
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEECCEE----EEe-ecccCCCCCeecceEEEEeeCCCcEEEEEEEeCCc
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIVDSFGPRWNEQYTWEVFDPCTVITVGVFDNGH 437 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~~~~~----~~T-~~~~~t~~P~Wne~~~~~v~~~~~~l~i~v~D~~~ 437 (772)
+.|+|.+.++.-.+.+. -.....||||.|.+.... .+| .+.++|..|.|||+|.-.|.+ ...|.|.||+.
T Consensus 10 ~flRi~l~~~~~~~~~~--~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~-- 84 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQS--CQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGK-- 84 (138)
T ss_dssp CCEEEEEEEEECCCCCC--SCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECS--
T ss_pred cceEEEeeccccCCCCC--cccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcC--
Confidence 57788776665433220 012359999999886542 677 677789999999999988764 67799999953
Q ss_pred CCCCCCCCCCcccEEEEEecCccc-----cCceEeeeEeeeecCCCCcccccEEEEEEEE
Q 004127 438 IHGQGGGGKDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLHPSGVRKMGEVQLAVRF 492 (772)
Q Consensus 438 ~~~~~~~~~~~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f 492 (772)
..++++.+.|++.+|. .+...+.|..|.. .|+|++.+++
T Consensus 85 --------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--------~Gkl~v~i~~ 128 (138)
T 2enj_A 85 --------NVDLISETTVELYSLAERCRKNNGKTEIWLELKP--------QGRMLMNARY 128 (138)
T ss_dssp --------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--------SCEEEEEEEE
T ss_pred --------CCCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 3389999999999996 4567789999874 4999999988
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=93.11 E-value=0.28 Score=44.21 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=87.6
Q ss_pred eecCcCceeEEEEEEEEeecCCCCC-CCCCCCcEEEEEE--CC-eeeeeeeecCCCCCeeccEEEEEecc-------CCC
Q 004127 32 TYDLVEQMQYLYVRVVKAKDLPGKD-VTGSCDPYVEVKL--GN-YKGTTKHFEKKSNPEWNQCFAFSKDR-------IQA 100 (772)
Q Consensus 32 ~~~~~~~~~~L~V~v~~a~~L~~~~-~~~~~dpyv~v~~--~~-~~~kT~~~~~t~nP~Wne~f~f~v~~-------~~~ 100 (772)
...+.+.-+.+.|+|.++.=-+..- ..+..+|..-+.+ -+ +...|.++. +.+|.+|-+-.|.+.. +.+
T Consensus 10 ~~~l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~ 88 (156)
T 2yrb_A 10 TIHLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQK 88 (156)
T ss_dssp CSSCCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHH
T ss_pred hhhccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhc
Confidence 3456677789999999986322110 0233467555444 45 455666555 8899999999988742 134
Q ss_pred ceEEEEEEecCCCCCceeEEEEEEccccCCCCCCCCCCCCeEEEeecCCCC-ceeeeEEEEEEEeeec
Q 004127 101 SVLEVLVKDKDVVLDDLIGRVMFDLNEVPKRIPPDSPLAPQWYRLEDRKGD-KVKTGELMLAVWMGTQ 167 (772)
Q Consensus 101 ~~L~i~V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l~~~~~~~ 167 (772)
..+.++++......-+.||.+.|+|.++..+.. ....-.+|....|. .. .|.|...+.+...
T Consensus 89 ~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~-~G~LeywiRL~~P 151 (156)
T 2yrb_A 89 NTITLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPN-FGTVEYWFRLRVS 151 (156)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTT-SEEEEEEEEEEEC
T ss_pred CCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcce-EEEEEEEEEEecc
Confidence 689999988754467799999999999986532 13345578877663 22 3999988877654
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=86.61 E-value=5.5 Score=38.03 Aligned_cols=40 Identities=10% Similarity=0.235 Sum_probs=32.9
Q ss_pred eeeeeeecCCCCCeeccEEEEEec--cCCCceEEEEEEecCC
Q 004127 73 KGTTKHFEKKSNPEWNQCFAFSKD--RIQASVLEVLVKDKDV 112 (772)
Q Consensus 73 ~~kT~~~~~t~nP~Wne~f~f~v~--~~~~~~L~i~V~d~~~ 112 (772)
..+|.+...+.+|.|+|++.+.+. ......|.|++++...
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 467888899999999999999884 3356889999998764
No 101
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=85.42 E-value=4.5 Score=48.17 Aligned_cols=91 Identities=20% Similarity=0.327 Sum_probs=61.4
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE--CCEE----EEeecccCCCCCeecceEEEEee--C-C-CcEEEEEE
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIVDSFGPRWNEQYTWEVF--D-P-CTVITVGV 432 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--~~~~----~~T~~~~~t~~P~Wne~~~~~v~--~-~-~~~l~i~v 432 (772)
..++|+|+.+.++... .....+-||.+.+ |++. .+|+.+. ..+|.|||-++|++. + | ...|.|.|
T Consensus 355 ~~f~v~i~~~~~~n~~----~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN----IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp SEEEEEEEEESCCCCC----CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CCEEEEEEEecCCCCC----ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 5899999999988642 2234677888766 6543 3444333 567889998888876 4 3 68999999
Q ss_pred EeCCcCCCCCCCCCCcccEEEEEecCcc
Q 004127 433 FDNGHIHGQGGGGKDSRIGKVRIRLSTL 460 (772)
Q Consensus 433 ~D~~~~~~~~~~~~~~~lG~~~i~l~~l 460 (772)
|+.....+ ..+.+..||.+.++|-+-
T Consensus 430 ~~~~~~~~--~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 430 CSVKGRKG--AKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCCC---------CCEEEEEESBCT
T ss_pred EEecCccC--cccccceeEEeeeeeEcc
Confidence 99764211 112456899999999875
No 102
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.11 E-value=4.1 Score=48.08 Aligned_cols=68 Identities=16% Similarity=0.228 Sum_probs=49.7
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeeecCCCCCeeccEEEEEe---ccCCCceEEEEEEecC
Q 004127 41 YLYVRVVKAKDLPGKDVTGSCDPYVEVKL--GNY----KGTTKHFEKKSNPEWNQCFAFSK---DRIQASVLEVLVKDKD 111 (772)
Q Consensus 41 ~L~V~v~~a~~L~~~~~~~~~dpyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~L~i~V~d~~ 111 (772)
.++|+|..+.++... ...+-||.+.+ |++ ..+|+.+....+|.|||.+.|++ .-+.+..|.|+||+..
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVV 294 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEec
Confidence 799999999998754 34577877655 553 34566565577899999999987 2345788999999963
No 103
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=85.00 E-value=3.5 Score=37.10 Aligned_cols=125 Identities=12% Similarity=0.182 Sum_probs=80.1
Q ss_pred cCCccEEEEEEEEecCCCCCccCCCCCCcCcE--EEEEECCE-EEEeecccCCCCCeecceEEEEeeCC--------CcE
Q 004127 359 KPSIGILELGVLSAHGLTPMKTKDGRGTTDAY--CVAKYGQK-WVRTRTIVDSFGPRWNEQYTWEVFDP--------CTV 427 (772)
Q Consensus 359 ~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpy--v~v~~~~~-~~~T~~~~~t~~P~Wne~~~~~v~~~--------~~~ 427 (772)
.+..+.+.|+|.++. +.+. .....+..+|. |.+.+-.. ..-|.++ ...+|.+|-+..|.|.-. ...
T Consensus 14 ~~gEnlfEihi~~~~-~~~~-~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~-~G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 14 ERGENLFEIHINKVT-FSSE-VLQASGDKEPVTFCTYAFYDFELQTTPVV-RGLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp CSSCEEEEEEEEEEC-CCHH-HHHHHCSSCCEEEEEECSTTCCCEECCCE-ESSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred cCCCcEEEEEEeEEE-EcHH-HHhhccccCCcEEEEEEEeceEeeecccc-cCCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 344578999998887 3221 00111234555 45544444 4555555 488999999988888622 246
Q ss_pred EEEEEEeCCcCCCCCCCCCCcccEEEEEecCcccc-CceEeeeEeeeecCCCCcccccEEEEEEEEee
Q 004127 428 ITVGVFDNGHIHGQGGGGKDSRIGKVRIRLSTLET-DRVYTHSYPLLVLHPSGVRKMGEVQLAVRFTC 494 (772)
Q Consensus 428 l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~~~g~~~~G~i~l~~~f~~ 494 (772)
+.+++..... +..+.||.++|++.++.. ...+....+|.+... +....|.|...+++..
T Consensus 91 l~lELhqa~g-------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 91 ITLEVHQAYS-------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEEECS-------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEE
T ss_pred EEEEEEEeeC-------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEec
Confidence 8888888642 256789999999999863 334556667776422 1135799998888754
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=82.92 E-value=5.4 Score=47.10 Aligned_cols=92 Identities=11% Similarity=0.204 Sum_probs=62.3
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE--CCEE----EEeecccCCCCCeecceEEEEee--C-C-CcEEEEEE
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIVDSFGPRWNEQYTWEVF--D-P-CTVITVGV 432 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--~~~~----~~T~~~~~t~~P~Wne~~~~~v~--~-~-~~~l~i~v 432 (772)
..++|.|..+.++... ..++-||.+.+ |++. ..|..+.-..+|.|||-++|++. + | ...|.|.|
T Consensus 217 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp SEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEEEecccCCC------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 5899999999998642 34677877654 7764 45555555778999999888876 3 3 67899999
Q ss_pred EeCCcC--C---CCC-CCCCCcccEEEEEecCcc
Q 004127 433 FDNGHI--H---GQG-GGGKDSRIGKVRIRLSTL 460 (772)
Q Consensus 433 ~D~~~~--~---~~~-~~~~~~~lG~~~i~l~~l 460 (772)
|+.... + .+. ....+..||.+.+++-+-
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 996421 1 000 011356999999999875
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=80.21 E-value=7.4 Score=46.33 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=57.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeeecCCCCCeeccEEEEEe---ccCCCceEEEEEEecC
Q 004127 41 YLYVRVVKAKDLPGKDVTGSCDPYVEVKL--GNY----KGTTKHFEKKSNPEWNQCFAFSK---DRIQASVLEVLVKDKD 111 (772)
Q Consensus 41 ~L~V~v~~a~~L~~~~~~~~~dpyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~L~i~V~d~~ 111 (772)
.++|+|..+.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++ .-+....|.|.||+..
T Consensus 356 ~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~ 433 (1091)
T 3hhm_A 356 ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 433 (1091)
T ss_dssp EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCC
T ss_pred CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEec
Confidence 7899999999886433 334677888776 443 34454443 56888999999987 2345789999999865
Q ss_pred CC-----CCceeEEEEEEcccc
Q 004127 112 VV-----LDDLIGRVMFDLNEV 128 (772)
Q Consensus 112 ~~-----~d~~lG~~~i~l~~l 128 (772)
.. ....||.+.++|-+.
T Consensus 434 ~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 434 GRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCC-------CCEEEEEESBCT
T ss_pred CccCcccccceeEEeeeeeEcc
Confidence 42 123566666666544
No 106
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=77.11 E-value=7.1 Score=37.26 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=41.3
Q ss_pred EEEeecccCCCCCeecceEEEEeeC---CCcEEEEEEEeCCcCCCCCCCCCCcccEEEEEecC
Q 004127 399 WVRTRTIVDSFGPRWNEQYTWEVFD---PCTVITVGVFDNGHIHGQGGGGKDSRIGKVRIRLS 458 (772)
Q Consensus 399 ~~~T~~~~~t~~P~Wne~~~~~v~~---~~~~l~i~v~D~~~~~~~~~~~~~~~lG~~~i~l~ 458 (772)
.++|.+...+.+|.|+|++.+.+.. +..-|.|+++.......++ ..+..+|.+.++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~d--k~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKD--KSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCC--CCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEeccccccc--ccCCeeEEEEEEcc
Confidence 4789999999999999999998884 4577999998765421111 12346777777764
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=69.94 E-value=4.8 Score=48.19 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=59.6
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEE--EECCEE----EEeecccCCCCCeecceEEEEee--C-C-CcEEEEEE
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVA--KYGQKW----VRTRTIVDSFGPRWNEQYTWEVF--D-P-CTVITVGV 432 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v--~~~~~~----~~T~~~~~t~~P~Wne~~~~~v~--~-~-~~~l~i~v 432 (772)
..++|+|..+.++... ..++-||.+ ..|++. ..|..+.-+.+|.|||-++|++. + | ...|.|.|
T Consensus 353 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCCC------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCCC------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 6899999999998642 346777664 557765 34555555778999999888876 3 3 67899999
Q ss_pred EeCCcCCCCC----------------CCCCCcccEEEEEecCcc
Q 004127 433 FDNGHIHGQG----------------GGGKDSRIGKVRIRLSTL 460 (772)
Q Consensus 433 ~D~~~~~~~~----------------~~~~~~~lG~~~i~l~~l 460 (772)
|+......+. ..+.+..||.+.+++-+-
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 9964221110 012345899999999775
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=67.91 E-value=21 Score=42.15 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=46.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEE--ECCe---eeeeeeecCCCCCeeccEEEEEe---ccCCCceEEEEEEecC
Q 004127 41 YLYVRVVKAKDLPGKDVTGSCDPYVEVK--LGNY---KGTTKHFEKKSNPEWNQCFAFSK---DRIQASVLEVLVKDKD 111 (772)
Q Consensus 41 ~L~V~v~~a~~L~~~~~~~~~dpyv~v~--~~~~---~~kT~~~~~t~nP~Wne~f~f~v---~~~~~~~L~i~V~d~~ 111 (772)
.++|+|+.+....... ...++-||.+. .|++ ..+|..+.-+.+|.|||.+.|++ .-+.+..|.|+||+..
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 6888888886522111 23456777764 3553 23455555567899999999987 2345788999999853
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=66.81 E-value=6.5 Score=47.05 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=49.7
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEE--EEECCe----eeeeeeecCCCCCeeccEEEEEec---cCCCceEEEEEEecC
Q 004127 41 YLYVRVVKAKDLPGKDVTGSCDPYVE--VKLGNY----KGTTKHFEKKSNPEWNQCFAFSKD---RIQASVLEVLVKDKD 111 (772)
Q Consensus 41 ~L~V~v~~a~~L~~~~~~~~~dpyv~--v~~~~~----~~kT~~~~~t~nP~Wne~f~f~v~---~~~~~~L~i~V~d~~ 111 (772)
.++|+|..+.++... ...+-||. +.-|++ ..+|+.+....+|.|||.+.|++. -+.+..|.|+||+..
T Consensus 354 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 354 PFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC-
T ss_pred CEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEec
Confidence 799999999998754 24566766 555663 345665555778999999999872 345688999999964
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=64.79 E-value=24 Score=41.78 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=58.6
Q ss_pred cEEEEEEEEecCCCCCccCCCCCCcCcEEEEEE--CCEE---EEeecccCCCCCeecceEEEEee--C-C-CcEEEEEEE
Q 004127 363 GILELGVLSAHGLTPMKTKDGRGTTDAYCVAKY--GQKW---VRTRTIVDSFGPRWNEQYTWEVF--D-P-CTVITVGVF 433 (772)
Q Consensus 363 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--~~~~---~~T~~~~~t~~P~Wne~~~~~v~--~-~-~~~l~i~v~ 433 (772)
..++|.|..+...... ....++-||.+.+ |++. .+|..+.-+.+|.|||-++|++. + | ...|.|.||
T Consensus 218 ~~f~i~i~~~~~~~~~----~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP----RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SEEEEEEEEEECSSCC----TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEeeccccccc----CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 4788888887652110 1134677877644 7764 34444444668999999888876 3 3 678999999
Q ss_pred eCCcCCCC----------CCCCCCcccEEEEEecCcc
Q 004127 434 DNGHIHGQ----------GGGGKDSRIGKVRIRLSTL 460 (772)
Q Consensus 434 D~~~~~~~----------~~~~~~~~lG~~~i~l~~l 460 (772)
+....+.. ...+++..||.+.++|-+-
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 85432100 0112456899999999875
No 111
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=24.96 E-value=1.4e+02 Score=23.87 Aligned_cols=37 Identities=14% Similarity=0.274 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhccccCCchhH
Q 004127 677 YDRLRSIAGRVQTVIGDLATQGERFQSLISWRDPRAT 713 (772)
Q Consensus 677 ~~~l~~~~~~vQ~~l~~~a~~~e~~~nl~~w~~p~~t 713 (772)
++.|.+-...++..-..+.....+++.-+-|++=+..
T Consensus 35 L~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 35 LSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444555445555555666666777765443
Done!