Query 004129
Match_columns 772
No_of_seqs 678 out of 4700
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 15:13:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 4.3E-51 1.5E-55 441.7 23.7 247 481-748 44-321 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-51 4.9E-56 439.5 19.7 248 481-749 16-292 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 1.5E-51 5.1E-56 441.3 19.3 245 481-745 29-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5E-51 1.7E-55 435.8 22.4 250 481-748 39-302 (307)
5 4b9d_A Serine/threonine-protei 100.0 6.4E-49 2.2E-53 425.6 21.7 241 480-739 26-276 (350)
6 3fpq_A Serine/threonine-protei 100.0 1.6E-48 5.6E-53 413.3 22.7 244 480-739 28-282 (290)
7 4g3f_A NF-kappa-beta-inducing 100.0 2E-48 6.7E-53 419.9 19.8 249 480-754 60-324 (336)
8 4ase_A Vascular endothelial gr 100.0 1E-48 3.5E-53 426.7 17.4 250 481-748 67-349 (353)
9 4fih_A Serine/threonine-protei 100.0 5.2E-48 1.8E-52 417.9 20.2 238 480-739 76-323 (346)
10 3hmm_A TGF-beta receptor type- 100.0 4.7E-48 1.6E-52 414.3 19.2 251 481-747 6-298 (303)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.8E-48 1.6E-52 412.1 19.1 259 480-766 34-304 (311)
12 3hyh_A Carbon catabolite-derep 100.0 8.9E-47 3.1E-51 396.7 22.8 238 480-739 15-262 (275)
13 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-47 9.1E-52 406.1 18.7 255 480-769 26-298 (304)
14 4fie_A Serine/threonine-protei 100.0 8.1E-47 2.8E-51 418.4 21.5 239 479-739 152-400 (423)
15 4g31_A Eukaryotic translation 100.0 5.2E-46 1.8E-50 397.1 18.5 242 477-739 5-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.4E-42 4.7E-47 384.7 22.0 251 480-740 56-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 3.5E-42 1.2E-46 377.2 21.4 245 478-739 21-352 (361)
18 3v5w_A G-protein coupled recep 100.0 6.7E-42 2.3E-46 395.5 24.4 242 481-739 192-449 (689)
19 2qkw_B Protein kinase; three-h 100.0 2E-41 6.7E-46 365.7 21.2 267 471-748 33-317 (321)
20 3uto_A Twitchin; kinase, muscl 100.0 4.1E-41 1.4E-45 390.4 23.7 241 480-739 159-410 (573)
21 2nru_A Interleukin-1 receptor- 100.0 2.3E-40 7.8E-45 354.6 25.4 276 464-746 12-306 (307)
22 3uim_A Brassinosteroid insensi 100.0 5.5E-41 1.9E-45 362.7 19.5 273 464-744 17-309 (326)
23 3p86_A Serine/threonine-protei 100.0 1.7E-40 6E-45 356.9 22.0 251 481-748 40-300 (309)
24 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-40 4.5E-45 357.3 17.2 245 481-748 13-284 (310)
25 2psq_A Fibroblast growth facto 100.0 4.5E-40 1.5E-44 362.8 21.3 249 481-749 84-367 (370)
26 3tt0_A Basic fibroblast growth 100.0 1.2E-39 4.2E-44 360.8 22.5 270 481-770 72-376 (382)
27 3soc_A Activin receptor type-2 100.0 8.3E-40 2.8E-44 353.5 20.4 250 481-748 27-320 (322)
28 3cbl_A C-FES, proto-oncogene t 100.0 3.4E-40 1.2E-44 364.6 17.2 246 481-747 117-375 (377)
29 3kmu_A ILK, integrin-linked ki 100.0 1E-39 3.6E-44 342.1 20.0 251 481-746 13-270 (271)
30 3kul_A Ephrin type-A receptor 100.0 1.4E-39 4.8E-44 352.3 21.3 249 481-750 52-317 (325)
31 1qcf_A Haematopoetic cell kina 100.0 9.9E-40 3.4E-44 369.9 21.0 245 481-748 191-446 (454)
32 4hcu_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43 339.2 23.3 244 481-747 13-267 (269)
33 2c30_A Serine/threonine-protei 100.0 5.7E-39 2E-43 346.9 25.9 254 465-740 23-295 (321)
34 3fe3_A MAP/microtubule affinit 100.0 4.2E-39 1.4E-43 349.1 24.6 239 480-740 17-265 (328)
35 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.8E-39 1.6E-43 337.4 23.8 245 481-748 11-266 (268)
36 3ugc_A Tyrosine-protein kinase 100.0 5.3E-40 1.8E-44 349.9 16.4 252 480-748 12-293 (295)
37 4eqm_A Protein kinase; transfe 100.0 4.4E-39 1.5E-43 343.3 23.1 254 480-749 13-278 (294)
38 3fxz_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 344.6 22.4 238 480-739 22-269 (297)
39 1o6l_A RAC-beta serine/threoni 100.0 7.7E-39 2.6E-43 348.2 25.4 239 481-740 8-261 (337)
40 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-39 5.1E-44 368.0 20.6 244 481-747 196-446 (450)
41 3lb7_A RAF proto-oncogene seri 100.0 4.6E-39 1.6E-43 345.4 22.2 251 481-749 39-303 (307)
42 3gen_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 337.2 25.0 244 481-747 27-281 (283)
43 4f0f_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 341.1 21.1 251 480-744 21-287 (287)
44 3zgw_A Maternal embryonic leuc 100.0 5.9E-39 2E-43 350.4 22.2 238 480-740 12-261 (347)
45 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.5E-39 8.5E-44 366.4 19.7 247 481-750 187-444 (452)
46 4euu_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 341.1 26.1 262 479-746 10-309 (319)
47 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-39 2.6E-43 343.5 21.7 252 481-754 11-271 (307)
48 3op5_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 358.0 16.1 262 480-749 37-332 (364)
49 2qol_A Ephrin receptor; recept 100.0 4.3E-39 1.5E-43 355.3 19.9 245 481-746 48-309 (373)
50 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.4E-39 2.2E-43 351.1 20.7 238 481-739 26-280 (353)
51 3q4u_A Activin receptor type-1 100.0 1.3E-38 4.5E-43 339.5 22.5 247 480-744 10-300 (301)
52 1fot_A TPK1 delta, CAMP-depend 100.0 3E-38 1E-42 340.9 25.2 238 481-739 9-258 (318)
53 3poz_A Epidermal growth factor 100.0 2.8E-39 9.7E-44 350.1 17.1 244 481-746 18-278 (327)
54 1luf_A Muscle-specific tyrosin 100.0 5.4E-39 1.8E-43 349.3 19.2 248 481-748 50-337 (343)
55 3vhe_A Vascular endothelial gr 100.0 4.2E-39 1.4E-43 352.5 18.2 259 470-747 15-356 (359)
56 1opk_A P150, C-ABL, proto-onco 100.0 2.8E-39 9.5E-44 370.1 17.3 244 481-746 223-478 (495)
57 4dc2_A Protein kinase C IOTA t 100.0 3.3E-38 1.1E-42 350.1 25.3 235 481-734 55-307 (396)
58 2yab_A Death-associated protei 100.0 2.3E-38 8E-43 347.7 23.8 247 478-739 12-272 (361)
59 1csn_A Casein kinase-1; phosph 100.0 1E-38 3.6E-43 339.8 20.4 262 480-763 12-297 (298)
60 3niz_A Rhodanese family protei 100.0 1.7E-38 5.7E-43 341.6 22.1 251 480-739 23-300 (311)
61 3l9p_A Anaplastic lymphoma kin 100.0 6.1E-39 2.1E-43 353.3 18.5 247 481-747 74-346 (367)
62 1qpc_A LCK kinase; alpha beta 100.0 1.2E-38 3.9E-43 336.5 19.9 248 481-751 16-274 (279)
63 3c0i_A Peripheral plasma membr 100.0 2.3E-38 7.8E-43 346.6 22.4 247 479-739 25-286 (351)
64 3t9t_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 330.0 22.9 244 481-747 11-265 (267)
65 2h8h_A Proto-oncogene tyrosine 100.0 8.4E-39 2.9E-43 369.5 19.4 245 481-748 270-525 (535)
66 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.7E-38 1.3E-42 344.7 23.5 238 481-739 44-293 (350)
67 2y0a_A Death-associated protei 100.0 3.8E-38 1.3E-42 341.2 23.3 246 479-739 12-271 (326)
68 3qd2_B Eukaryotic translation 100.0 1.1E-38 3.7E-43 344.6 18.9 239 481-739 9-325 (332)
69 1tki_A Titin; serine kinase, m 100.0 2.4E-38 8.3E-43 342.1 21.6 241 480-740 7-258 (321)
70 3a8x_A Protein kinase C IOTA t 100.0 6.2E-38 2.1E-42 342.3 25.0 235 481-734 12-264 (345)
71 2bdw_A Hypothetical protein K1 100.0 6.4E-38 2.2E-42 344.5 24.3 243 480-740 31-285 (362)
72 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.4E-39 2.9E-43 347.7 17.0 239 480-740 11-259 (336)
73 3kex_A Receptor tyrosine-prote 100.0 3.7E-39 1.3E-43 348.7 14.2 244 481-746 16-276 (325)
74 3a62_A Ribosomal protein S6 ki 100.0 8.2E-38 2.8E-42 338.7 24.7 239 481-739 20-276 (327)
75 2ivs_A Proto-oncogene tyrosine 100.0 6.6E-39 2.2E-43 344.0 15.9 247 481-747 26-312 (314)
76 3gni_B Strad alpha; kinase fol 100.0 4.3E-38 1.5E-42 349.1 22.8 252 480-740 27-334 (389)
77 3qup_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 344.8 16.9 251 481-748 26-300 (323)
78 3dtc_A Mitogen-activated prote 100.0 2.1E-38 7.2E-43 332.8 19.1 246 481-744 10-271 (271)
79 3soa_A Calcium/calmodulin-depe 100.0 1.2E-37 4E-42 351.2 26.4 243 480-740 13-268 (444)
80 3ork_A Serine/threonine protei 100.0 3.7E-38 1.3E-42 338.7 21.3 256 480-750 14-285 (311)
81 3tki_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 342.8 19.5 240 481-740 10-262 (323)
82 3lxp_A Non-receptor tyrosine-p 100.0 5.7E-39 1.9E-43 346.2 14.9 253 480-750 33-314 (318)
83 3c1x_A Hepatocyte growth facto 100.0 9E-39 3.1E-43 352.6 16.8 252 481-752 92-361 (373)
84 2wqm_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 336.7 22.4 256 480-750 34-301 (310)
85 2i0e_A Protein kinase C-beta I 100.0 6.7E-38 2.3E-42 343.0 23.3 238 481-739 23-276 (353)
86 4fr4_A YANK1, serine/threonine 100.0 3.1E-38 1.1E-42 349.1 20.6 240 481-739 18-271 (384)
87 1xjd_A Protein kinase C, theta 100.0 2E-38 6.9E-43 346.0 18.9 237 481-738 20-268 (345)
88 1t46_A HOMO sapiens V-KIT hard 100.0 7.8E-38 2.7E-42 335.4 23.1 250 481-749 26-310 (313)
89 2zv2_A Calcium/calmodulin-depe 100.0 4E-38 1.4E-42 336.0 20.6 244 480-739 15-292 (298)
90 4e5w_A Tyrosine-protein kinase 100.0 2.7E-38 9.3E-43 337.4 19.2 251 479-745 22-301 (302)
91 2izr_A Casein kinase I isoform 100.0 2.8E-38 9.5E-43 342.5 19.5 248 481-748 12-283 (330)
92 3og7_A AKAP9-BRAF fusion prote 100.0 3E-38 1E-42 335.6 19.2 249 480-746 26-288 (289)
93 2r5t_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 347.5 20.5 240 481-741 41-291 (373)
94 4aw2_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 360.9 14.1 250 475-740 72-339 (437)
95 1ob3_A PFPK5, cell division co 100.0 3.5E-38 1.2E-42 334.9 19.5 249 480-739 4-280 (288)
96 2pvf_A Fibroblast growth facto 100.0 4.4E-38 1.5E-42 341.6 20.4 251 481-751 38-323 (334)
97 2x4f_A Myosin light chain kina 100.0 1E-37 3.5E-42 344.2 23.7 238 483-739 94-342 (373)
98 1rjb_A FL cytokine receptor; k 100.0 5.8E-38 2E-42 341.6 21.3 251 481-750 48-338 (344)
99 3hko_A Calcium/calmodulin-depe 100.0 5.8E-38 2E-42 341.6 21.2 254 472-739 21-330 (345)
100 3v8s_A RHO-associated protein 100.0 8.7E-39 3E-43 356.6 14.8 245 477-740 69-330 (410)
101 1u5q_A Serine/threonine protei 100.0 6.8E-38 2.3E-42 342.4 21.4 241 481-740 57-306 (348)
102 2jii_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 347.5 16.6 261 480-762 44-349 (352)
103 2pmi_A Negative RE, cyclin-dep 100.0 7.1E-38 2.4E-42 337.6 20.8 248 481-739 8-293 (317)
104 1kob_A Twitchin; kinase, intra 100.0 1.8E-37 6.1E-42 343.7 24.3 242 480-740 53-305 (387)
105 3lzb_A Epidermal growth factor 100.0 2.6E-38 9E-43 342.6 17.1 244 481-746 18-278 (327)
106 2ozo_A Tyrosine-protein kinase 100.0 5E-38 1.7E-42 368.4 20.7 241 485-747 343-599 (613)
107 2buj_A Serine/threonine-protei 100.0 8.7E-38 3E-42 336.1 20.9 253 480-752 31-312 (317)
108 4eut_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 346.9 22.2 263 479-747 10-310 (396)
109 4ejn_A RAC-alpha serine/threon 100.0 7.4E-38 2.5E-42 353.8 21.2 239 480-739 150-404 (446)
110 4fvq_A Tyrosine-protein kinase 100.0 7.8E-38 2.7E-42 331.7 20.0 244 481-747 11-276 (289)
111 3g33_A Cell division protein k 100.0 5.7E-38 1.9E-42 336.4 19.2 255 480-739 11-296 (308)
112 3lxl_A Tyrosine-protein kinase 100.0 6.6E-38 2.2E-42 339.0 19.7 254 480-750 25-307 (327)
113 3o0g_A Cell division protein k 100.0 8.5E-38 2.9E-42 332.5 20.2 250 480-739 4-282 (292)
114 1mp8_A Focal adhesion kinase 1 100.0 1.7E-38 5.7E-43 336.0 14.6 246 480-747 17-277 (281)
115 2w4o_A Calcium/calmodulin-depe 100.0 2E-37 6.7E-42 338.9 23.4 240 479-739 54-305 (349)
116 3fdn_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 326.8 23.0 239 481-740 12-258 (279)
117 3mdy_A Bone morphogenetic prot 100.0 4.8E-37 1.6E-41 332.8 26.0 251 480-748 39-333 (337)
118 3brb_A Proto-oncogene tyrosine 100.0 6E-38 2E-42 336.9 18.5 252 481-749 37-311 (313)
119 1u59_A Tyrosine-protein kinase 100.0 1.1E-37 3.6E-42 330.9 20.1 247 481-749 12-275 (287)
120 2vd5_A DMPK protein; serine/th 100.0 1.3E-38 4.6E-43 355.3 13.9 248 476-740 60-328 (412)
121 2y94_A 5'-AMP-activated protei 100.0 2.9E-37 1E-41 350.4 25.1 240 480-740 18-267 (476)
122 1mqb_A Ephrin type-A receptor 100.0 1.4E-37 4.9E-42 337.7 21.6 246 481-747 47-310 (333)
123 2i1m_A Macrophage colony-stimu 100.0 5.6E-38 1.9E-42 340.1 18.3 248 481-747 49-327 (333)
124 2acx_A G protein-coupled recep 100.0 1.6E-37 5.6E-42 357.8 23.2 242 481-739 187-444 (576)
125 2eue_A Carbon catabolite derep 100.0 1.7E-37 5.7E-42 327.1 21.2 238 480-739 15-262 (275)
126 1byg_A CSK, protein (C-termina 100.0 1.9E-38 6.6E-43 334.8 13.9 245 481-748 24-275 (278)
127 2v62_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 343.2 17.2 258 480-746 39-328 (345)
128 3kfa_A Tyrosine-protein kinase 100.0 6.7E-38 2.3E-42 332.0 17.6 245 481-747 16-272 (288)
129 2a2a_A Death-associated protei 100.0 3.7E-37 1.3E-41 332.3 23.5 246 479-739 13-272 (321)
130 2h34_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 330.1 23.8 252 480-749 36-299 (309)
131 4hgt_A Casein kinase I isoform 100.0 5.1E-38 1.8E-42 333.9 16.4 264 480-764 11-295 (296)
132 3pls_A Macrophage-stimulating 100.0 4.4E-37 1.5E-41 327.2 23.5 254 481-753 24-294 (298)
133 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-37 4.1E-42 331.2 19.0 260 480-764 11-295 (296)
134 3g2f_A Bone morphogenetic prot 100.0 2.2E-37 7.6E-42 335.7 21.4 256 481-751 16-323 (336)
135 4fl3_A Tyrosine-protein kinase 100.0 9.1E-38 3.1E-42 367.3 19.7 241 484-746 375-631 (635)
136 1t4h_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 327.2 22.4 244 480-739 28-282 (290)
137 3f66_A Hepatocyte growth facto 100.0 4.1E-37 1.4E-41 327.8 23.0 250 481-750 28-295 (298)
138 3uc3_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 338.7 22.6 240 480-740 22-275 (361)
139 3llt_A Serine/threonine kinase 100.0 3.2E-37 1.1E-41 338.1 22.4 247 480-739 37-355 (360)
140 1p4o_A Insulin-like growth fac 100.0 1.1E-37 3.8E-42 336.0 18.5 246 481-746 28-299 (322)
141 3cok_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 328.2 18.6 239 481-739 14-262 (278)
142 2a19_B Interferon-induced, dou 100.0 1.4E-37 4.7E-42 328.5 18.7 241 481-749 14-277 (284)
143 4agu_A Cyclin-dependent kinase 100.0 3.2E-37 1.1E-41 330.7 21.6 251 481-740 6-285 (311)
144 1xbb_A Tyrosine-protein kinase 100.0 2.1E-37 7E-42 329.3 19.9 245 481-747 19-280 (291)
145 2ac3_A MAP kinase-interacting 100.0 5E-37 1.7E-41 330.0 23.1 242 480-739 14-295 (316)
146 3cc6_A Protein tyrosine kinase 100.0 1.6E-37 5.4E-42 328.3 18.8 246 481-748 15-275 (281)
147 3kk8_A Calcium/calmodulin depe 100.0 1.1E-36 3.9E-41 321.9 25.1 243 480-740 8-262 (284)
148 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-37 4.4E-42 336.7 18.2 251 480-747 43-323 (326)
149 2xir_A Vascular endothelial gr 100.0 2.7E-37 9.4E-42 331.6 20.6 251 480-748 29-312 (316)
150 1fvr_A Tyrosine-protein kinase 100.0 1.7E-37 5.7E-42 335.8 18.9 249 481-749 28-303 (327)
151 3dbq_A Dual specificity protei 100.0 5E-37 1.7E-41 334.7 22.6 240 480-740 11-274 (343)
152 3f3z_A Calcium/calmodulin-depe 100.0 8.6E-37 2.9E-41 321.8 23.7 239 480-739 11-261 (277)
153 3p1a_A MYT1 kinase, membrane-a 100.0 4.3E-37 1.5E-41 330.5 21.6 236 480-739 59-304 (311)
154 3ll6_A Cyclin G-associated kin 100.0 1.6E-37 5.5E-42 336.1 18.4 249 481-750 31-312 (337)
155 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.2E-37 1.8E-41 352.6 23.3 237 481-734 188-438 (543)
156 3bhy_A Death-associated protei 100.0 7.7E-37 2.6E-41 323.0 22.9 253 480-747 7-275 (283)
157 2w5a_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 328.3 16.8 248 481-743 9-271 (279)
158 3is5_A Calcium-dependent prote 100.0 5.5E-37 1.9E-41 325.3 21.7 241 480-739 24-278 (285)
159 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-37 4.9E-42 328.5 17.0 237 481-739 14-279 (289)
160 2rku_A Serine/threonine-protei 100.0 7.1E-37 2.4E-41 325.5 22.4 240 480-740 17-266 (294)
161 1nxk_A MAP kinase-activated pr 100.0 4.1E-37 1.4E-41 342.6 21.1 238 484-740 68-322 (400)
162 3oz6_A Mitogen-activated prote 100.0 1.5E-37 5.1E-42 344.7 17.4 250 480-740 11-329 (388)
163 1u46_A ACK-1, activated CDC42 100.0 1.5E-37 5.3E-42 329.6 16.7 249 481-748 21-286 (291)
164 2owb_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 332.5 22.1 240 480-740 43-292 (335)
165 3kn6_A Ribosomal protein S6 ki 100.0 2.3E-37 8E-42 334.9 18.3 235 484-739 17-270 (325)
166 2vgo_A Serine/threonine-protei 100.0 8.9E-37 3E-41 323.1 22.3 239 481-740 17-263 (284)
167 2yfx_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 335.9 16.7 248 480-747 32-305 (327)
168 2jam_A Calcium/calmodulin-depe 100.0 1.9E-36 6.6E-41 323.9 24.1 241 480-740 11-262 (304)
169 3mtl_A Cell division protein k 100.0 1.4E-37 4.8E-42 336.3 15.2 249 480-740 4-282 (324)
170 3byv_A Rhoptry kinase; malaria 100.0 6.8E-38 2.3E-42 346.1 12.8 237 480-739 75-359 (377)
171 3lm5_A Serine/threonine-protei 100.0 1.2E-36 4E-41 329.5 22.2 247 478-740 28-288 (327)
172 2zmd_A Dual specificity protei 100.0 1.6E-36 5.4E-41 336.8 23.5 240 480-740 58-321 (390)
173 1b6c_B TGF-B superfamily recep 100.0 2.2E-36 7.5E-41 328.5 24.0 249 480-748 44-338 (342)
174 2yex_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 319.6 21.6 239 481-739 10-261 (276)
175 3dls_A PAS domain-containing s 100.0 1.1E-37 3.9E-42 338.8 13.7 236 480-740 26-275 (335)
176 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-36 3.6E-41 360.6 22.6 238 481-739 344-597 (674)
177 2h6d_A 5'-AMP-activated protei 100.0 1.5E-36 5E-41 319.7 21.2 239 481-740 14-262 (276)
178 1vzo_A Ribosomal protein S6 ki 100.0 5.3E-37 1.8E-41 336.2 18.4 242 481-740 57-322 (355)
179 3com_A Serine/threonine-protei 100.0 2.9E-36 1E-40 323.7 23.8 248 470-739 21-278 (314)
180 1ua2_A CAK, cell division prot 100.0 3.9E-37 1.3E-41 335.9 17.1 253 480-740 12-292 (346)
181 2wtk_C Serine/threonine-protei 100.0 4.2E-36 1.4E-40 320.9 24.4 244 480-740 7-264 (305)
182 2r3i_A Cell division protein k 100.0 6.7E-37 2.3E-41 326.1 18.2 249 481-739 6-283 (299)
183 1cm8_A Phosphorylated MAP kina 100.0 2.2E-36 7.4E-41 332.9 22.6 256 480-746 27-316 (367)
184 3rp9_A Mitogen-activated prote 100.0 1.4E-36 4.6E-41 344.5 21.6 253 480-740 55-397 (458)
185 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.9E-36 6.3E-41 333.0 22.0 240 480-748 67-341 (365)
186 2qr7_A Ribosomal protein S6 ki 100.0 5.7E-37 2E-41 334.2 17.8 239 480-740 24-278 (342)
187 3ttj_A Mitogen-activated prote 100.0 2.1E-36 7E-41 343.3 23.0 249 480-740 64-356 (464)
188 2y7j_A Phosphorylase B kinase 100.0 6.8E-36 2.3E-40 328.7 26.4 244 481-739 97-359 (365)
189 2j7t_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 324.1 20.1 240 480-739 21-275 (302)
190 3eqc_A Dual specificity mitoge 100.0 1.6E-36 5.5E-41 332.6 21.0 250 481-740 36-325 (360)
191 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-36 6E-41 323.9 20.4 239 480-741 24-272 (303)
192 3pg1_A Mitogen-activated prote 100.0 2.5E-36 8.6E-41 331.2 22.2 264 470-740 15-317 (362)
193 3sv0_A Casein kinase I-like; t 100.0 1.7E-36 5.7E-41 344.8 21.5 266 480-767 9-296 (483)
194 3gxj_A TGF-beta receptor type- 100.0 1.5E-38 5.2E-43 339.1 4.3 249 480-748 5-299 (303)
195 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.1E-37 2.1E-41 332.0 16.7 248 480-739 36-318 (329)
196 3rgf_A Cyclin-dependent kinase 100.0 1.3E-36 4.3E-41 339.2 19.5 249 481-740 23-334 (405)
197 3lij_A Calcium/calmodulin depe 100.0 4.4E-36 1.5E-40 343.7 24.3 242 480-740 39-292 (494)
198 3nyv_A Calmodulin-domain prote 100.0 2.1E-36 7.2E-41 345.4 21.4 243 480-740 28-282 (484)
199 4aaa_A Cyclin-dependent kinase 100.0 1.3E-36 4.6E-41 329.4 18.8 248 481-739 28-306 (331)
200 3q60_A ROP5B; pseudokinase, tr 100.0 3.8E-37 1.3E-41 339.3 14.7 248 481-739 65-352 (371)
201 2clq_A Mitogen-activated prote 100.0 1.9E-36 6.4E-41 321.9 19.2 237 484-739 28-278 (295)
202 2pml_X PFPK7, Ser/Thr protein 100.0 1E-36 3.4E-41 332.2 17.3 253 481-739 34-322 (348)
203 3fme_A Dual specificity mitoge 100.0 1.6E-36 5.6E-41 321.5 18.5 241 481-739 10-266 (290)
204 3nsz_A CK II alpha, casein kin 100.0 5E-36 1.7E-40 324.2 22.5 245 480-739 38-319 (330)
205 2xrw_A Mitogen-activated prote 100.0 7.8E-36 2.7E-40 328.9 24.4 249 480-740 27-319 (371)
206 3mwu_A Calmodulin-domain prote 100.0 5.8E-36 2E-40 341.9 23.9 242 480-740 24-277 (486)
207 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-36 8.6E-41 329.7 20.0 269 481-761 14-329 (353)
208 3an0_A Dual specificity mitoge 100.0 2.1E-36 7.3E-41 328.8 19.1 240 481-739 54-310 (340)
209 3i6u_A CDS1, serine/threonine- 100.0 1.6E-36 5.3E-41 340.1 18.3 245 480-739 137-399 (419)
210 3kvw_A DYRK2, dual specificity 100.0 3.1E-36 1E-40 338.7 20.5 189 480-679 99-302 (429)
211 1blx_A Cyclin-dependent kinase 100.0 7.2E-36 2.5E-40 322.2 22.4 252 480-739 13-296 (326)
212 1wak_A Serine/threonine-protei 100.0 2.5E-36 8.6E-41 334.6 19.3 251 480-739 39-391 (397)
213 2x7f_A TRAF2 and NCK-interacti 100.0 5.4E-36 1.9E-40 323.4 21.3 240 481-739 27-286 (326)
214 2vwi_A Serine/threonine-protei 100.0 6E-37 2.1E-41 326.7 13.5 247 480-739 17-287 (303)
215 1z57_A Dual specificity protei 100.0 6E-36 2E-40 323.8 21.5 248 480-739 16-328 (339)
216 1phk_A Phosphorylase kinase; g 100.0 1.3E-35 4.5E-40 316.0 23.8 244 481-739 20-283 (298)
217 3mi9_A Cell division protein k 100.0 3.7E-36 1.3E-40 328.6 20.0 251 480-739 19-311 (351)
218 3q5i_A Protein kinase; CDPK, m 100.0 9E-36 3.1E-40 342.0 23.9 245 480-740 38-302 (504)
219 3eb0_A Putative uncharacterize 100.0 3.2E-36 1.1E-40 333.4 19.4 247 480-740 9-322 (383)
220 2ycf_A Serine/threonine-protei 100.0 5.3E-36 1.8E-40 323.3 20.2 243 480-739 12-274 (322)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.5E-37 1.5E-41 330.6 11.7 248 481-750 36-306 (319)
222 2i6l_A Mitogen-activated prote 100.0 6.3E-36 2.2E-40 321.2 19.4 247 480-739 13-305 (320)
223 1j1b_A Glycogen synthase kinas 100.0 6.7E-36 2.3E-40 335.0 19.8 252 480-745 56-344 (420)
224 1zy4_A Serine/threonine-protei 100.0 2.9E-35 9.9E-40 313.2 23.1 239 481-739 9-283 (303)
225 3qyz_A Mitogen-activated prote 100.0 1.4E-35 4.9E-40 325.8 21.1 249 480-740 29-314 (364)
226 3n9x_A Phosphotransferase; mal 100.0 1.4E-35 4.7E-40 333.8 21.4 189 480-676 28-252 (432)
227 2j0j_A Focal adhesion kinase 1 100.0 6E-36 2E-40 353.1 19.1 244 481-746 393-651 (656)
228 2fst_X Mitogen-activated prote 100.0 5.3E-36 1.8E-40 329.8 17.4 250 480-740 31-312 (367)
229 2wei_A Calmodulin-domain prote 100.0 5.3E-35 1.8E-39 310.1 24.3 241 480-739 24-276 (287)
230 4exu_A Mitogen-activated prote 100.0 1.6E-35 5.6E-40 326.4 20.3 248 481-740 45-324 (371)
231 4e7w_A Glycogen synthase kinas 100.0 7.7E-36 2.6E-40 331.7 17.7 254 480-746 42-330 (394)
232 2vx3_A Dual specificity tyrosi 100.0 4.8E-35 1.6E-39 323.9 23.3 190 481-679 57-261 (382)
233 3cek_A Dual specificity protei 100.0 4.3E-35 1.5E-39 314.8 22.2 240 480-740 30-293 (313)
234 3e3p_A Protein kinase, putativ 100.0 7.7E-35 2.6E-39 318.8 24.1 265 471-747 17-324 (360)
235 3coi_A Mitogen-activated prote 100.0 4.1E-35 1.4E-39 320.7 20.9 248 481-740 27-306 (353)
236 1q8y_A SR protein kinase; tran 100.0 2.5E-35 8.5E-40 324.2 18.8 252 480-740 21-334 (373)
237 2eu9_A Dual specificity protei 100.0 6.5E-35 2.2E-39 318.0 21.4 248 480-739 21-333 (355)
238 2dyl_A Dual specificity mitoge 100.0 1.3E-34 4.4E-39 311.1 22.8 242 481-740 28-284 (318)
239 3uqc_A Probable conserved tran 100.0 3.8E-35 1.3E-39 311.7 18.1 232 480-749 33-268 (286)
240 2rio_A Serine/threonine-protei 100.0 9.6E-36 3.3E-40 335.2 14.3 243 476-739 13-295 (434)
241 3aln_A Dual specificity mitoge 100.0 3.4E-35 1.2E-39 317.5 17.8 242 481-739 25-285 (327)
242 3fhr_A MAP kinase-activated pr 100.0 3.3E-35 1.1E-39 319.5 15.3 242 481-740 31-288 (336)
243 3m2w_A MAP kinase-activated pr 100.0 2E-34 6.7E-39 307.8 19.6 226 481-740 20-257 (299)
244 3a99_A Proto-oncogene serine/t 100.0 5.6E-35 1.9E-39 315.3 13.7 235 480-739 45-293 (320)
245 2iwi_A Serine/threonine-protei 100.0 3.1E-35 1.1E-39 315.6 10.5 236 480-740 33-284 (312)
246 3p23_A Serine/threonine-protei 100.0 3.1E-34 1.1E-38 322.4 17.4 235 481-739 27-283 (432)
247 2pzi_A Probable serine/threoni 100.0 1.3E-33 4.4E-38 335.6 18.7 234 480-744 82-326 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 8.7E-34 3E-38 317.1 12.7 235 481-738 81-362 (413)
249 3qa8_A MGC80376 protein; kinas 100.0 5.1E-34 1.7E-38 332.1 11.0 261 480-747 16-310 (676)
250 2vuw_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 305.8 8.4 241 481-738 23-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 6.9E-27 2.3E-31 271.0 11.5 180 487-676 243-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.4E-24 8.1E-29 248.3 10.9 176 484-676 342-538 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 3.1E-23 1.1E-27 222.8 13.4 160 119-286 2-170 (313)
254 1zar_A RIO2 kinase; serine kin 99.8 1.2E-21 4.2E-26 207.1 10.7 161 479-661 91-274 (282)
255 3rgz_A Protein brassinosteroid 99.8 1.5E-21 5E-26 235.1 11.5 159 117-283 6-196 (768)
256 4ecn_A Leucine-rich repeat pro 99.8 8.1E-21 2.8E-25 229.0 11.4 157 121-284 267-536 (876)
257 4eco_A Uncharacterized protein 99.8 1.3E-20 4.4E-25 222.0 12.6 156 122-284 29-294 (636)
258 4fcg_A Uncharacterized protein 99.7 6.3E-19 2.1E-23 190.5 6.8 160 119-284 23-201 (328)
259 1zth_A RIO1 serine protein kin 99.7 5.8E-18 2E-22 176.5 10.6 143 480-635 49-219 (258)
260 1w8a_A SLIT protein; signaling 99.6 3.5E-15 1.2E-19 148.1 11.3 125 159-283 8-144 (192)
261 3e6j_A Variable lymphocyte rec 99.6 1.1E-14 3.7E-19 148.7 12.9 125 156-281 16-151 (229)
262 4gyi_A RIO2 kinase; protein ki 99.6 3.4E-15 1.2E-19 162.6 9.4 142 479-634 96-264 (397)
263 3rgz_A Protein brassinosteroid 99.5 2.8E-15 9.7E-20 180.3 6.5 111 174-284 613-723 (768)
264 2o6r_A Variable lymphocyte rec 99.5 3.4E-14 1.2E-18 138.7 11.9 125 159-283 7-142 (177)
265 2o6s_A Variable lymphocyte rec 99.5 1.3E-13 4.5E-18 138.2 12.5 124 159-282 7-141 (208)
266 1ogq_A PGIP-2, polygalacturona 99.5 2.2E-14 7.6E-19 153.6 6.7 118 169-286 76-195 (313)
267 2v70_A SLIT-2, SLIT homolog 2 99.5 1.1E-13 3.7E-18 140.5 11.3 125 159-283 11-147 (220)
268 2v9t_B SLIT homolog 2 protein 99.5 1.7E-13 5.8E-18 139.0 12.2 124 159-282 11-145 (220)
269 3m19_A Variable lymphocyte rec 99.4 2E-13 6.9E-18 141.1 10.6 110 171-280 37-146 (251)
270 4fcg_A Uncharacterized protein 99.4 2.6E-13 8.9E-18 146.3 11.6 114 169-284 183-296 (328)
271 2wfh_A SLIT homolog 2 protein 99.4 5.2E-13 1.8E-17 132.5 11.8 122 159-281 10-142 (193)
272 2v70_A SLIT-2, SLIT homolog 2 99.4 5.3E-13 1.8E-17 135.3 11.3 114 169-282 57-170 (220)
273 4b8c_D Glucose-repressible alc 99.4 1.2E-13 4.2E-18 164.5 7.5 107 173-283 228-334 (727)
274 2je0_A Acidic leucine-rich nuc 99.4 3E-13 1E-17 128.0 5.9 112 169-282 17-130 (149)
275 2z81_A CD282 antigen, TOLL-lik 99.4 5E-13 1.7E-17 154.0 8.7 125 158-283 3-141 (549)
276 3v47_A TOLL-like receptor 5B a 99.4 9.8E-13 3.4E-17 147.8 10.2 128 157-284 6-148 (455)
277 2o6q_A Variable lymphocyte rec 99.3 2.6E-12 8.9E-17 134.3 11.6 120 157-279 3-123 (270)
278 3g39_A Variable lymphocyte rec 99.3 4.6E-12 1.6E-16 122.9 12.1 107 173-282 13-119 (170)
279 1dce_A Protein (RAB geranylger 99.3 1.8E-12 6.3E-17 149.9 9.7 108 170-282 442-550 (567)
280 4eco_A Uncharacterized protein 99.3 6.2E-13 2.1E-17 156.4 5.7 124 158-282 192-347 (636)
281 1w8a_A SLIT protein; signaling 99.3 4.8E-12 1.6E-16 125.4 11.0 110 172-284 11-121 (192)
282 2r9u_A Variable lymphocyte rec 99.3 8E-12 2.8E-16 121.8 12.0 108 172-282 15-122 (174)
283 3rfs_A Internalin B, repeat mo 99.3 7.9E-12 2.7E-16 130.8 11.9 114 169-282 85-198 (272)
284 2ell_A Acidic leucine-rich nuc 99.3 1.7E-12 5.7E-17 125.4 6.1 112 169-282 24-137 (168)
285 3m19_A Variable lymphocyte rec 99.3 9.4E-12 3.2E-16 128.5 12.2 114 169-282 59-172 (251)
286 2o6s_A Variable lymphocyte rec 99.3 9.5E-12 3.3E-16 124.5 11.7 114 169-282 52-165 (208)
287 2v9t_B SLIT homolog 2 protein 99.3 8.3E-12 2.9E-16 126.4 11.0 112 169-280 56-167 (220)
288 2ifg_A High affinity nerve gro 99.3 9E-12 3.1E-16 135.0 12.0 109 159-280 8-118 (347)
289 4g8a_A TOLL-like receptor 4; l 99.3 8.1E-12 2.8E-16 145.9 12.4 128 157-284 25-168 (635)
290 3e6j_A Variable lymphocyte rec 99.3 1E-11 3.5E-16 126.5 11.5 113 169-282 64-176 (229)
291 3vq2_A TLR4, TOLL-like recepto 99.3 1.5E-11 5.1E-16 143.5 14.1 128 157-284 5-148 (606)
292 3rfs_A Internalin B, repeat mo 99.3 1.7E-11 5.7E-16 128.3 12.2 113 169-283 63-175 (272)
293 2xot_A Amphoterin-induced prot 99.3 1.2E-11 4.2E-16 135.0 11.1 124 159-283 18-153 (361)
294 2z62_A TOLL-like receptor 4, v 99.3 3.6E-11 1.2E-15 125.8 13.9 115 170-284 29-144 (276)
295 3v47_A TOLL-like receptor 5B a 99.2 1.8E-11 6.2E-16 137.4 11.5 112 169-280 275-386 (455)
296 3oja_A Leucine-rich immune mol 99.2 1.3E-11 4.6E-16 140.2 10.0 122 158-283 108-231 (487)
297 4ecn_A Leucine-rich repeat pro 99.2 4E-12 1.4E-16 153.4 5.7 123 158-282 434-589 (876)
298 4ezg_A Putative uncharacterize 99.2 1.7E-11 5.7E-16 121.8 9.2 108 169-279 66-173 (197)
299 3oja_B Anopheles plasmodium-re 99.2 3.3E-11 1.1E-15 140.6 12.9 113 171-283 53-165 (597)
300 3cvr_A Invasion plasmid antige 99.2 6.5E-12 2.2E-16 144.8 6.8 112 156-283 40-157 (571)
301 3j0a_A TOLL-like receptor 5; m 99.2 1.4E-11 4.7E-16 149.7 9.8 123 159-281 14-139 (844)
302 2z66_A Variable lymphocyte rec 99.2 2.8E-11 9.6E-16 128.6 10.6 110 170-279 102-213 (306)
303 4ezg_A Putative uncharacterize 99.2 2.5E-11 8.4E-16 120.6 9.1 111 169-283 44-154 (197)
304 2z80_A TOLL-like receptor 2, v 99.2 1.9E-11 6.3E-16 132.9 8.8 124 157-282 28-166 (353)
305 1wwl_A Monocyte differentiatio 99.2 9.7E-12 3.3E-16 132.8 6.2 110 169-279 95-215 (312)
306 2z62_A TOLL-like receptor 4, v 99.2 5.6E-11 1.9E-15 124.3 11.5 114 169-282 52-166 (276)
307 1ozn_A Reticulon 4 receptor; N 99.2 5.2E-11 1.8E-15 125.2 11.2 113 170-282 33-146 (285)
308 1ozn_A Reticulon 4 receptor; N 99.2 5.4E-11 1.8E-15 125.1 11.3 113 170-282 81-194 (285)
309 2wfh_A SLIT homolog 2 protein 99.2 8.6E-11 3E-15 116.4 12.1 104 173-280 14-117 (193)
310 2id5_A Lingo-1, leucine rich r 99.2 7E-11 2.4E-15 133.7 12.6 124 160-283 12-146 (477)
311 2je0_A Acidic leucine-rich nuc 99.2 1.8E-11 6E-16 115.7 6.2 104 169-274 42-149 (149)
312 3vq2_A TLR4, TOLL-like recepto 99.2 5.5E-11 1.9E-15 138.7 11.7 115 169-283 56-171 (606)
313 3t6q_A CD180 antigen; protein- 99.2 5.8E-11 2E-15 138.5 11.6 114 170-283 34-148 (606)
314 2z66_A Variable lymphocyte rec 99.2 4.1E-11 1.4E-15 127.3 9.3 116 169-284 126-242 (306)
315 2ell_A Acidic leucine-rich nuc 99.2 3.7E-11 1.2E-15 115.9 8.1 108 169-278 49-160 (168)
316 2z7x_B TOLL-like receptor 1, v 99.2 3.8E-11 1.3E-15 137.4 9.5 108 169-279 21-129 (520)
317 2ft3_A Biglycan; proteoglycan, 99.1 1.2E-10 4.2E-15 125.3 12.0 118 159-279 33-161 (332)
318 2z63_A TOLL-like receptor 4, v 99.1 6E-11 2.1E-15 137.1 10.2 115 169-283 396-512 (570)
319 3g39_A Variable lymphocyte rec 99.1 7.3E-11 2.5E-15 114.4 9.2 100 159-258 9-119 (170)
320 2xot_A Amphoterin-induced prot 99.1 9.7E-11 3.3E-15 127.8 11.3 110 169-279 64-177 (361)
321 1ziw_A TOLL-like receptor 3; i 99.1 1.1E-10 3.8E-15 138.0 12.7 114 170-283 26-139 (680)
322 3zyi_A Leucine-rich repeat-con 99.1 1.2E-10 4.1E-15 131.0 12.1 123 161-283 56-189 (452)
323 1p9a_G Platelet glycoprotein I 99.1 1.4E-10 4.8E-15 122.6 11.7 108 170-278 78-185 (290)
324 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 9.1E-11 3.1E-15 135.8 10.9 108 169-279 52-160 (562)
325 4g8a_A TOLL-like receptor 4; l 99.1 1.5E-10 5E-15 135.2 12.0 115 169-283 76-191 (635)
326 1xku_A Decorin; proteoglycan, 99.1 1.8E-10 6.3E-15 123.7 11.6 119 158-279 30-159 (330)
327 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 1.9E-10 6.5E-15 133.1 12.4 94 190-283 350-446 (562)
328 2o6r_A Variable lymphocyte rec 99.1 3.8E-10 1.3E-14 109.7 12.4 106 172-280 10-115 (177)
329 2o6q_A Variable lymphocyte rec 99.1 2.8E-10 9.5E-15 118.8 12.2 114 169-282 61-174 (270)
330 1wwl_A Monocyte differentiatio 99.1 1.8E-11 6.2E-16 130.7 3.1 108 173-281 67-189 (312)
331 2z81_A CD282 antigen, TOLL-lik 99.1 6.2E-11 2.1E-15 136.4 7.6 116 169-284 50-167 (549)
332 2xwt_C Thyrotropin receptor; s 99.1 1.3E-10 4.6E-15 118.7 9.2 110 169-280 31-146 (239)
333 2z7x_B TOLL-like receptor 1, v 99.1 1.4E-10 4.7E-15 132.8 10.2 110 171-282 304-416 (520)
334 1p9a_G Platelet glycoprotein I 99.1 2.4E-10 8.2E-15 120.8 11.2 109 170-281 32-140 (290)
335 4b8c_D Glucose-repressible alc 99.1 6.3E-12 2.2E-16 149.8 -1.3 113 169-284 247-360 (727)
336 3j0a_A TOLL-like receptor 5; m 99.1 1.6E-10 5.4E-15 140.4 10.5 115 169-283 48-166 (844)
337 3oja_A Leucine-rich immune mol 99.1 1.2E-10 4E-15 132.5 8.4 111 169-283 144-256 (487)
338 3o6n_A APL1; leucine-rich repe 99.1 2.5E-10 8.7E-15 125.6 10.7 112 170-283 46-159 (390)
339 3zyj_A Leucine-rich repeat-con 99.1 4.6E-10 1.6E-14 125.7 12.3 124 160-283 44-178 (440)
340 1a9n_A U2A', U2A'; complex (nu 99.1 2.1E-10 7.2E-15 111.6 8.1 105 169-279 19-127 (176)
341 3t6q_A CD180 antigen; protein- 99.1 3.8E-10 1.3E-14 131.6 11.4 118 169-286 400-521 (606)
342 4glp_A Monocyte differentiatio 99.0 8E-11 2.7E-15 125.5 5.0 114 170-283 118-242 (310)
343 2z63_A TOLL-like receptor 4, v 99.0 4.6E-10 1.6E-14 129.6 11.8 111 170-280 53-164 (570)
344 3o6n_A APL1; leucine-rich repe 99.0 6.2E-10 2.1E-14 122.5 11.5 111 169-280 69-180 (390)
345 1ziw_A TOLL-like receptor 3; i 99.0 4E-10 1.4E-14 133.3 10.7 115 169-283 49-163 (680)
346 4glp_A Monocyte differentiatio 99.0 1.6E-10 5.6E-15 123.1 6.4 110 170-279 92-211 (310)
347 2id5_A Lingo-1, leucine rich r 99.0 4.2E-10 1.4E-14 127.2 10.0 113 169-281 56-168 (477)
348 3tm0_A Aminoglycoside 3'-phosp 99.0 8.2E-10 2.8E-14 114.5 11.0 137 481-632 17-211 (263)
349 1a9n_A U2A', U2A'; complex (nu 99.0 2.4E-10 8.2E-15 111.2 5.9 105 170-278 43-153 (176)
350 1dce_A Protein (RAB geranylger 99.0 4.8E-10 1.7E-14 129.6 9.3 101 169-272 463-567 (567)
351 3zyj_A Leucine-rich repeat-con 99.0 2.6E-09 9E-14 119.5 15.0 114 169-283 88-202 (440)
352 1xku_A Decorin; proteoglycan, 99.0 9.4E-10 3.2E-14 118.1 10.6 111 169-283 145-257 (330)
353 3o53_A Protein LRIM1, AGAP0063 99.0 1.1E-09 3.7E-14 117.1 10.0 121 159-283 109-231 (317)
354 3oja_B Anopheles plasmodium-re 99.0 1E-09 3.6E-14 127.9 10.6 111 170-280 76-186 (597)
355 2r9u_A Variable lymphocyte rec 99.0 1.4E-09 4.7E-14 105.8 9.6 98 159-256 12-120 (174)
356 2xwt_C Thyrotropin receptor; s 99.0 7.4E-10 2.5E-14 113.2 7.8 113 169-284 55-174 (239)
357 3zyi_A Leucine-rich repeat-con 99.0 1.3E-09 4.4E-14 122.5 10.3 112 169-282 171-283 (452)
358 3o53_A Protein LRIM1, AGAP0063 99.0 9.2E-10 3.1E-14 117.7 8.6 111 169-283 144-256 (317)
359 1ds9_A Outer arm dynein; leuci 99.0 5E-12 1.7E-16 125.7 -8.5 104 171-279 20-129 (198)
360 2ft3_A Biglycan; proteoglycan, 98.9 5.3E-10 1.8E-14 120.3 6.6 110 169-283 147-258 (332)
361 2z80_A TOLL-like receptor 2, v 98.9 8.4E-10 2.9E-14 119.7 7.9 115 169-284 76-193 (353)
362 3cvr_A Invasion plasmid antige 98.9 9.5E-10 3.3E-14 126.8 8.5 98 170-284 121-225 (571)
363 1h6t_A Internalin B; cell adhe 98.9 3.2E-09 1.1E-13 112.1 11.2 106 169-282 68-173 (291)
364 1jl5_A Outer protein YOPM; leu 98.9 3E-10 1E-14 127.9 3.3 49 169-218 11-59 (454)
365 3bz5_A Internalin-J, INLJ; leu 98.9 2.8E-09 9.5E-14 120.1 11.2 100 169-279 42-141 (457)
366 2ast_B S-phase kinase-associat 98.9 4.9E-10 1.7E-14 120.4 4.2 111 169-280 70-184 (336)
367 1xeu_A Internalin C; cellular 98.9 4.2E-09 1.4E-13 109.6 10.8 101 170-279 64-164 (263)
368 1nd4_A Aminoglycoside 3'-phosp 98.9 2.6E-09 9.1E-14 109.9 9.2 126 488-633 30-213 (264)
369 1xeu_A Internalin C; cellular 98.9 4.7E-09 1.6E-13 109.2 10.9 103 169-280 41-143 (263)
370 1h6t_A Internalin B; cell adhe 98.9 4.1E-09 1.4E-13 111.3 10.6 103 169-279 90-192 (291)
371 2ast_B S-phase kinase-associat 98.9 2E-10 6.9E-15 123.4 0.1 122 158-283 36-162 (336)
372 2ca6_A RAN GTPase-activating p 98.9 5.5E-10 1.9E-14 122.8 3.1 114 169-282 187-320 (386)
373 1h6u_A Internalin H; cell adhe 98.9 5.9E-09 2E-13 111.0 10.8 106 169-282 85-190 (308)
374 1m9s_A Internalin B; cell inva 98.9 5.5E-09 1.9E-13 121.6 10.9 106 169-282 65-170 (605)
375 1ds9_A Outer arm dynein; leuci 98.9 1.8E-11 6.1E-16 121.7 -8.7 110 169-283 48-158 (198)
376 1h6u_A Internalin H; cell adhe 98.9 7.5E-09 2.6E-13 110.2 11.1 104 169-280 63-166 (308)
377 1m9s_A Internalin B; cell inva 98.8 6E-09 2E-13 121.3 10.6 104 169-280 87-190 (605)
378 3dxp_A Putative acyl-COA dehyd 98.8 9.7E-09 3.3E-13 111.7 10.8 142 483-633 43-247 (359)
379 4fmz_A Internalin; leucine ric 98.8 9.4E-09 3.2E-13 110.9 10.1 104 171-280 223-326 (347)
380 4fmz_A Internalin; leucine ric 98.8 5.5E-09 1.9E-13 112.7 8.2 104 169-278 243-346 (347)
381 1o6v_A Internalin A; bacterial 98.8 1E-08 3.5E-13 115.7 10.5 104 169-280 243-346 (466)
382 1jl5_A Outer protein YOPM; leu 98.8 4.3E-09 1.5E-13 118.4 7.2 104 169-284 257-378 (454)
383 3bz5_A Internalin-J, INLJ; leu 98.8 1.1E-08 3.9E-13 115.0 10.2 101 169-280 148-248 (457)
384 3g06_A SSPH2 (leucine-rich rep 98.8 1.1E-08 3.7E-13 119.3 9.8 82 193-283 221-302 (622)
385 2ca6_A RAN GTPase-activating p 98.8 1.8E-09 6.2E-14 118.6 2.7 109 171-279 161-288 (386)
386 1o6v_A Internalin A; bacterial 98.8 9.4E-09 3.2E-13 115.9 8.4 107 169-283 265-371 (466)
387 2ifg_A High affinity nerve gro 98.7 1.5E-08 5.2E-13 109.4 8.9 84 196-281 11-96 (347)
388 3g06_A SSPH2 (leucine-rich rep 98.7 4.5E-09 1.5E-13 122.6 4.7 109 156-279 19-135 (622)
389 3goz_A Leucine-rich repeat-con 98.7 5.7E-09 1.9E-13 113.7 4.0 108 171-278 24-151 (362)
390 3goz_A Leucine-rich repeat-con 98.7 7.1E-09 2.4E-13 112.9 3.5 107 174-280 3-124 (362)
391 3rw6_A Nuclear RNA export fact 98.7 1.4E-09 4.7E-14 112.8 -2.4 125 157-283 76-238 (267)
392 4ay9_X Follicle-stimulating ho 98.6 2.9E-08 1E-12 107.5 7.8 116 159-275 9-138 (350)
393 3sg8_A APH(2'')-ID; antibiotic 98.6 1.6E-07 5.3E-12 99.6 10.8 179 483-676 25-287 (304)
394 1z7x_W Ribonuclease inhibitor; 98.5 1.6E-08 5.5E-13 113.4 -0.4 111 169-279 256-384 (461)
395 4ay9_X Follicle-stimulating ho 98.4 3.6E-07 1.2E-11 98.8 8.7 106 173-282 13-121 (350)
396 3rw6_A Nuclear RNA export fact 98.4 9.4E-08 3.2E-12 99.0 2.7 80 190-271 167-257 (267)
397 1z7x_W Ribonuclease inhibitor; 98.4 3.6E-08 1.2E-12 110.6 -0.6 115 169-283 227-359 (461)
398 3un9_A NLR family member X1; l 98.3 1.8E-07 6.2E-12 102.2 4.2 111 169-279 101-225 (372)
399 3r70_A Aminoglycoside phosphot 98.3 2.5E-06 8.5E-11 91.1 12.0 130 483-633 42-236 (320)
400 3d1u_A Putative fructosamine-3 98.2 3.8E-06 1.3E-10 88.3 10.6 137 483-632 20-214 (288)
401 3un9_A NLR family member X1; l 98.1 4.5E-07 1.5E-11 99.1 1.6 111 170-280 127-254 (372)
402 3tdw_A Gentamicin resistance p 98.1 1.7E-05 5.7E-10 84.1 13.1 135 483-633 24-223 (306)
403 3ogk_B Coronatine-insensitive 98.1 6.5E-07 2.2E-11 103.6 1.6 111 170-280 379-503 (592)
404 1io0_A Tropomodulin; LRR prote 98.1 1.1E-06 3.8E-11 86.0 2.2 110 169-278 36-164 (185)
405 4gkh_A Aminoglycoside 3'-phosp 98.0 3.9E-05 1.3E-09 79.2 12.0 125 493-633 40-222 (272)
406 3ovc_A Hygromycin-B 4-O-kinase 97.9 3.2E-05 1.1E-09 84.0 10.7 140 483-634 46-243 (362)
407 3ogk_B Coronatine-insensitive 97.9 3E-06 1E-10 98.0 1.7 108 171-280 166-308 (592)
408 3ats_A Putative uncharacterize 97.8 6.4E-05 2.2E-09 81.1 10.2 85 484-570 26-122 (357)
409 2p1m_B Transport inhibitor res 97.6 8.1E-06 2.8E-10 94.3 -0.7 112 169-281 372-497 (594)
410 1io0_A Tropomodulin; LRR prote 97.6 2.8E-05 9.6E-10 75.9 3.2 97 184-280 27-138 (185)
411 2p1m_B Transport inhibitor res 97.5 3.9E-05 1.3E-09 88.5 4.5 113 169-283 105-229 (594)
412 2q83_A YTAA protein; 2635576, 97.5 0.00043 1.5E-08 73.7 12.2 31 603-633 221-251 (346)
413 3f7w_A Putative fructosamine-3 97.5 0.00057 1.9E-08 71.3 12.3 75 483-568 20-97 (288)
414 2olc_A MTR kinase, methylthior 97.4 0.00039 1.3E-08 76.1 10.3 80 483-566 35-120 (397)
415 2ra8_A Uncharacterized protein 97.2 5.1E-05 1.7E-09 82.3 0.3 109 169-280 172-294 (362)
416 3jr1_A Putative fructosamine-3 97.1 0.004 1.4E-07 65.8 13.2 136 483-630 41-232 (312)
417 2ra8_A Uncharacterized protein 96.8 0.00072 2.5E-08 73.2 4.7 109 170-278 194-320 (362)
418 3sb4_A Hypothetical leucine ri 96.8 0.0022 7.6E-08 68.1 8.4 82 192-278 225-310 (329)
419 2ppq_A HSK, HK, homoserine kin 96.6 0.0068 2.3E-07 63.9 10.2 157 466-632 6-215 (322)
420 3dxq_A Choline/ethanolamine ki 96.5 0.002 6.8E-08 67.6 5.6 29 604-633 173-201 (301)
421 3csv_A Aminoglycoside phosphot 96.3 0.013 4.3E-07 62.3 10.5 30 604-633 183-216 (333)
422 3sb4_A Hypothetical leucine ri 96.3 0.0063 2.2E-07 64.5 7.6 80 192-274 201-283 (329)
423 2pyw_A Uncharacterized protein 96.2 0.013 4.3E-07 64.6 10.0 69 604-673 232-313 (420)
424 1zyl_A Hypothetical protein YI 95.9 0.037 1.3E-06 58.3 11.5 157 466-633 10-222 (328)
425 2qg7_A Ethanolamine kinase PV0 95.8 0.061 2.1E-06 59.9 13.0 73 484-568 114-188 (458)
426 3feg_A Choline/ethanolamine ki 95.8 0.024 8.1E-07 61.5 9.4 137 485-633 57-253 (379)
427 1nw1_A Choline kinase (49.2 KD 95.7 0.024 8.4E-07 62.6 9.5 72 484-568 79-159 (429)
428 3e4g_A ATP synthase subunit S, 95.6 0.007 2.4E-07 58.1 3.7 34 242-275 115-149 (176)
429 1pgv_A TMD-1, tropomodulin TMD 95.4 0.0085 2.9E-07 58.6 3.7 110 168-277 40-169 (197)
430 3e4g_A ATP synthase subunit S, 95.3 0.0054 1.9E-07 58.9 2.0 84 169-252 61-150 (176)
431 3c5i_A Choline kinase; choline 95.3 0.03 1E-06 60.4 8.1 28 605-633 213-240 (369)
432 3rfe_A Platelet glycoprotein I 95.2 0.024 8.2E-07 51.5 5.9 16 262-277 52-67 (130)
433 3i1a_A Spectinomycin phosphotr 94.6 0.21 7.3E-06 53.0 12.2 30 604-633 206-235 (339)
434 2yle_A Protein spire homolog 1 94.5 0.11 3.6E-06 51.4 8.7 98 566-671 33-131 (229)
435 3rfe_A Platelet glycoprotein I 94.4 0.077 2.6E-06 48.1 7.1 57 196-254 11-68 (130)
436 1pgv_A TMD-1, tropomodulin TMD 93.3 0.049 1.7E-06 53.2 3.6 91 185-275 33-136 (197)
437 4fdw_A Leucine rich hypothetic 92.8 0.23 7.9E-06 54.1 8.6 83 189-276 267-356 (401)
438 3f2s_A CK, chetk-alpha, cholin 92.8 0.29 1E-05 53.2 9.3 28 605-632 245-278 (401)
439 4fdw_A Leucine rich hypothetic 89.4 0.78 2.7E-05 49.9 8.5 103 170-275 272-380 (401)
440 3mes_A Choline kinase; malaria 88.6 0.93 3.2E-05 49.7 8.4 28 605-633 263-290 (424)
441 3g15_A CK, chetk-alpha, cholin 88.5 1.6 5.5E-05 47.3 10.2 28 606-633 246-279 (401)
442 2ks1_B Epidermal growth factor 86.7 0.64 2.2E-05 33.2 3.6 29 414-442 11-40 (44)
443 2l2t_A Receptor tyrosine-prote 85.4 0.66 2.3E-05 33.1 3.1 29 415-443 11-40 (44)
444 2jwa_A Receptor tyrosine-prote 79.7 1.2 4.2E-05 31.7 2.7 25 416-441 14-39 (44)
445 4ann_A ESSB; membrane protein, 78.9 4.9 0.00017 39.4 7.8 115 537-677 43-158 (215)
446 3cxl_A N-chimerin; SH2, RHO-GA 73.6 0.45 1.5E-05 52.9 -1.5 63 482-550 146-215 (463)
447 2k9y_A Ephrin type-A receptor 72.1 1.3 4.6E-05 31.0 1.3 26 414-439 13-39 (41)
448 4ano_A ESSB; membrane protein, 70.3 11 0.00037 37.0 7.8 114 537-677 48-163 (219)
449 4gt6_A Cell surface protein; l 67.6 15 0.00052 39.1 9.1 81 189-275 261-344 (394)
450 4fs7_A Uncharacterized protein 66.8 9.3 0.00032 40.8 7.3 79 189-275 272-353 (394)
451 4gt6_A Cell surface protein; l 66.0 6.7 0.00023 42.0 5.9 83 188-276 283-368 (394)
452 4h09_A Hypothetical leucine ri 66.0 14 0.00049 38.9 8.5 83 189-275 236-320 (379)
453 4fs7_A Uncharacterized protein 61.0 11 0.00038 40.2 6.5 82 188-275 292-376 (394)
454 4h09_A Hypothetical leucine ri 50.3 40 0.0014 35.3 8.7 86 188-278 212-299 (379)
455 1iij_A ERBB-2 receptor protein 46.1 4.9 0.00017 27.1 0.3 7 416-422 10-16 (35)
456 2k1k_A Ephrin type-A receptor 36.0 31 0.0011 23.6 3.1 9 431-439 29-37 (38)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.3e-51 Score=441.74 Aligned_cols=247 Identities=22% Similarity=0.373 Sum_probs=204.0
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+++|+|+||+||+|++. ++..||||++.... ....++|.+|+++|++++|||||+++|+|.+.+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 116 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR-- 116 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 45578899999999999874 47889999986432 334578999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhhc-------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE-------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
..+||||||++|+|.++++... ...++|.+++.|+.|||+||+|||+.+ ||||||||+||||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQG 194 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETT
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCC
Confidence 5799999999999999996432 246999999999999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHH
Q 004129 622 YAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689 (772)
Q Consensus 622 ~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~ 689 (772)
+++||+|||+++.. ..++..|||||.+.+..|+.++|||||||+||||+| |+.||.. .+..+.+..
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~ 272 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDC 272 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--SCHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC--CCHHHHHHH
Confidence 99999999998743 124557999999999999999999999999999999 8999963 334444555
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
+..+... ..+..+++++.+||.+||+.||++||||.||++.|+.+.+..
T Consensus 273 i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 273 ITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 4444221 122345678899999999999999999999999999987753
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-51 Score=439.54 Aligned_cols=248 Identities=22% Similarity=0.370 Sum_probs=206.7
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+++|+|+||+||+|++. ++..||||++.... ....++|.+|+++|++++|||||+++|+|.+++
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~-- 88 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-- 88 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--
Confidence 45678999999999999864 46789999986432 334578999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhh-----------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQ-----------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA 623 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~-----------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~ 623 (772)
..+||||||++|+|.++|+.. ....++|.+++.|+.|||+||+|||+++ ||||||||+||||++++.
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 166 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCCCc
Confidence 579999999999999999743 2356999999999999999999999988 999999999999999999
Q ss_pred EEEccccCccCCC-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHh
Q 004129 624 AKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYL 691 (772)
Q Consensus 624 ~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~ 691 (772)
+||+|||+++... .++..|+|||.+.+..|+.|+|||||||+||||+| |+.||.. .+..+....+.
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~i~ 244 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ--LSNNEVIECIT 244 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--CCHHHHHHHHH
Confidence 9999999986321 24557999999999999999999999999999999 8999963 34445555555
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.+..+ ..+..+++++.+||.+||+.||++||||+||++.|+++.+..+
T Consensus 245 ~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 44321 1233456789999999999999999999999999999887654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-51 Score=441.28 Aligned_cols=245 Identities=20% Similarity=0.371 Sum_probs=203.4
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++++|+|+||+||+|++. +++.||||++..... ....++|.+|+.+|++++|||||+++|+|.+++
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-- 102 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-- 102 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC--
Confidence 45778999999999999873 467899999864432 223468999999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
..+||||||++|+|.++|+... ...++|..+++|+.|||+||+|||+.+ ||||||||+||||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYD 180 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEECC
Confidence 4699999999999999996432 246999999999999999999999988 999999999999999
Q ss_pred CCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHH
Q 004129 621 DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWAS 688 (772)
Q Consensus 621 ~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~ 688 (772)
++++||+|||+++.. ..++..|+|||.+.++.|+.++|||||||+||||+| |+.||.. .+..+.+.
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~--~~~~~~~~ 258 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG--YSNQDVVE 258 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--CCHHHHHH
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC--CCHHHHHH
Confidence 999999999998642 124457999999999999999999999999999999 8999963 33444444
Q ss_pred HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004129 689 EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 689 ~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
.+..+.. .+.++.++.++.+||.+||+.||++||||.||++.|+.+.
T Consensus 259 ~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 259 MIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 4443321 1123456678999999999999999999999999998753
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5e-51 Score=435.82 Aligned_cols=250 Identities=25% Similarity=0.440 Sum_probs=202.9
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+++|+|+||+||+|+++. .||||+++.... .....++|.+|+++|++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 467789999999999999764 589998764332 234457899999999999999999999998754 358999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~----- 635 (772)
|||++|+|.++|+. ....++|.+++.|+.|||+||+|||+.+ ||||||||+||||++++++||+|||+++..
T Consensus 111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999999964 3456999999999999999999999987 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 636 ------TAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ------~~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|||||.+. ...|+.++|||||||+||||+||+.||.... . ...+...+.... ..|.+.
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-~-~~~~~~~~~~~~-----~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-N-RDQIIFMVGRGY-----ASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-C-HHHHHHHHHTTC-----CCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-h-HHHHHHHHhcCC-----CCCCcc
Confidence 23567899999985 3469999999999999999999999996432 2 222222222211 122233
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..+++++.+||.+||+.||++||||.||++.|+.++...
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 344556778999999999999999999999999999887543
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.4e-49 Score=425.61 Aligned_cols=241 Identities=20% Similarity=0.373 Sum_probs=202.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... ....++|.+|+++|++++|||||++++++.+++ ..||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yi 100 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYI 100 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEE
Confidence 47889999999999999996 46899999998765432 334578999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
|||||++|+|.+++..+....+++.....|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+++...
T Consensus 101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999999997666667899999999999999999999998 9999999999999999999999999997543
Q ss_pred -------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.|+..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+..+..+ ..+
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~----------~~~ 246 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFP----------PVS 246 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCC----------CCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCCC----------CCC
Confidence 367789999999999999999999999999999999999953 4555666666655322 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++.++.+|+.+||+.||++|||+.|+++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 334567899999999999999999999986
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-48 Score=413.33 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=197.5
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC--CCceE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
.++..++|+|+||+||+|+.. +++.||+|++...... ....++|.+|+++|++++|||||++++++.+. +....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 104 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEE
Confidence 345567899999999999965 6789999998754322 33457899999999999999999999998652 22257
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL~DFGla~~~ 635 (772)
+||||||++|+|.++++. ...+++..+..|+.||+.||+|||+++++||||||||+||||+ +++.+||+|||+|+..
T Consensus 105 ~lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999999963 4569999999999999999999999888899999999999998 4799999999998643
Q ss_pred -------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..|+..|||||.+.+ .|+.++|||||||++|||+||+.||... .+.......+..+..+. .+
T Consensus 183 ~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-~~~~~~~~~i~~~~~~~---------~~ 251 (290)
T 3fpq_A 183 RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SF 251 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GG
T ss_pred CCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-CcHHHHHHHHHcCCCCC---------CC
Confidence 236778999998864 6999999999999999999999999632 33344444443332211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+...++++.+|+.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2223457889999999999999999999975
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2e-48 Score=419.89 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=205.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
.++.+++|+|+||+||+|+.. +|+.||||++.... .+.+|+++|++++|||||++++++.+++ ..||
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----------~~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~i 127 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----------FRVEELVACAGLSSPRIVPLYGAVREGP--WVNI 127 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----------CCTHHHHTTTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----------hHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 366778999999999999964 68999999986432 1247999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNT-- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kL~DFGla~~~-- 635 (772)
|||||++|+|.++++. ...+++..+..|+.||+.||+|||+++ ||||||||+||||+.++ .+||+|||+++..
T Consensus 128 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp EECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred EEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999999964 356999999999999999999999998 99999999999999987 6999999998632
Q ss_pred ------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 636 ------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
..|+..|||||++.+..|+.++|||||||++|||+||+.||...... +....+..+..+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~~~------ 275 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--PLCLKIASEPPPI------ 275 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--CCHHHHHHSCCGG------
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHcCCCCc------
Confidence 13677899999999999999999999999999999999999754321 1222333332221
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
...++.+++++.+++.+||+.||++|||+.|+++.|.........-..|
T Consensus 276 --~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hP 324 (336)
T 4g3f_A 276 --REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSP 324 (336)
T ss_dssp --GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSC
T ss_pred --hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCC
Confidence 1233456678899999999999999999999999998876654443333
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-48 Score=426.66 Aligned_cols=250 Identities=21% Similarity=0.339 Sum_probs=202.9
Q ss_pred cccccccccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCC-CcccceeEEEEcCCC
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|++.. ++.||||++..... ....++|.+|+++|.+++| ||||+++|+|.+.+.
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~----~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 678889999999999998643 35789998764322 2345689999999999965 999999999976532
Q ss_pred ceEEEEEecCCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT 619 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld 619 (772)
..+||||||++|+|.++|+... ...++|..++.|+.|||+||+|||+++ ||||||||+|||++
T Consensus 143 -~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLS 219 (353)
T ss_dssp -CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEC
T ss_pred -EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCccceeeC
Confidence 3589999999999999997532 245899999999999999999999988 99999999999999
Q ss_pred CCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHH
Q 004129 620 EDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWA 687 (772)
Q Consensus 620 ~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~ 687 (772)
+++.+||+|||+++.... ++..|||||.+.+..|+.++|||||||+||||+| |+.||...... ....
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~ 298 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC 298 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHH
Confidence 999999999999975422 2346999999999999999999999999999998 99999643322 2222
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..+..+ ..++.+++++.++|.+||+.||++||||.||++.|+++.+..
T Consensus 299 ~~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 299 RRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 333332211 122345578899999999999999999999999999987654
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.2e-48 Score=417.85 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=200.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++++|+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+++ ..||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~i 148 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWV 148 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-----HHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 477889999999999999965 68999999987543322 346889999999999999999999999887 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
|||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 149 vmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 149 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp EECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred EEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 9999999999999853 45899999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||++.+..|+.++||||+||++|||+||+.||... +..+....+..+..+. + ...
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~-------~-~~~ 293 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPR-------L-KNL 293 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCC-------C-SCG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCC-------C-Ccc
Confidence 23677899999999999999999999999999999999999643 3444444443332111 1 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+++++.+|+.+||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 345578899999999999999999999876
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.7e-48 Score=414.32 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=195.0
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC--ceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~~L 558 (772)
.+.+++|+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...+|
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp EEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4556789999999999998 48899999885432 112234456777788999999999999986542 24699
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
|||||++|+|.++++. ..++|..+.+|+.|+|+||+|||+. .++||||||||+|||||+++++||+|||++
T Consensus 79 V~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999999963 4589999999999999999999976 346999999999999999999999999997
Q ss_pred cCC-------------CCCCccccchhhhccC------CCCCCCcHHHHHHHHHHHHcCCCcccCCC-------------
Q 004129 633 NNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITGRISYSIEN------------- 680 (772)
Q Consensus 633 ~~~-------------~~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ELltG~~P~~~~~------------- 680 (772)
+.. ..++..|+|||.+.+. .|+.|+|||||||+||||+||+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 532 1356789999998654 46789999999999999999987764211
Q ss_pred CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 681 GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
............. ..+|.++. ...+..+.+.+||.+||+.||++||||.||++.|+++.+.
T Consensus 236 ~~~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 236 PSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1222222222211 12233322 1235677899999999999999999999999999998764
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.8e-48 Score=412.05 Aligned_cols=259 Identities=19% Similarity=0.280 Sum_probs=214.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++.+..... ....+.+.+|+++|++++|||||++++++.+++ ..||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 37888999999999999996 468899999987543222 223467999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
|||||++|+|.+++.. ...+++.....|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+++..
T Consensus 110 vmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999999963 456999999999999999999999998 999999999999999999999999998632
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..|+..|+|||++.+..|+.++||||+||++|||+||+.||.. .+..+....+..+...+
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~~~---------- 253 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDF---------- 253 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC----------
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCC----------
Confidence 2367789999999999999999999999999999999999964 34556666666554322
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhh
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEI 766 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~ 766 (772)
++..++++.+|+.+||+.||++|||++|+... ..++ .+|.+...+|+.++.
T Consensus 254 -p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~-~~i~------~Hp~F~~idw~~l~~ 304 (311)
T 4aw0_A 254 -PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY-GPLK------AHPFFESVTWENLHQ 304 (311)
T ss_dssp -CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH-HHHH------TSGGGTTCCCTTGGG
T ss_pred -CcccCHHHHHHHHHHccCCHhHCcChHHHcCC-HHHH------CCCCcCCCCHHHhcC
Confidence 22345678899999999999999999987432 1111 256677778887653
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.9e-47 Score=396.66 Aligned_cols=238 Identities=22% Similarity=0.340 Sum_probs=192.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||+|++......+ ....+.+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~i 90 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIM 90 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEE
Confidence 47889999999999999995 468999999987543322 223467999999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+ +|+|.+++.. ...+++.....++.||+.||+|||+++ |+||||||+|||+++++++||+|||+++..
T Consensus 91 vmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99999 6899999853 456999999999999999999999998 999999999999999999999999998643
Q ss_pred -----CCCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 -----TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 -----~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..| +.++||||+||++|||+||+.||.. .+..+....+..+...+.
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~~~~~~~p----------- 232 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYTLP----------- 232 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC-----------
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC-----------
Confidence 236778999999988876 5799999999999999999999964 345555555555433222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++++.+|+.+||+.||++|||++|+++
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234467889999999999999999999986
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-47 Score=406.12 Aligned_cols=255 Identities=19% Similarity=0.258 Sum_probs=204.6
Q ss_pred ccccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++........ ...++.+|+++|++++|||||++++++.+++ .
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~ 100 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHPFIVKLHYAFQTEG--K 100 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE---ECC------CCCCCCCCTTEECEEEEEEETT--E
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH---HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--E
Confidence 378899999999999999853 467899999875432221 1236889999999999999999999999877 7
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.|+|||||++|+|.+++.. ...+++..+..|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+++..
T Consensus 101 ~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 101 LYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 8999999999999999963 456999999999999999999999998 999999999999999999999999998632
Q ss_pred ---------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 636 ---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|+|||.+.+..|+.++||||+||++|||+||+.||.. .+..+....+..+....
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~--------- 245 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKAKLGM--------- 245 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC---------
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC--cCHHHHHHHHHcCCCCC---------
Confidence 2467789999999999999999999999999999999999963 34555556665543322
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhhcc
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSM-----RGIAAKLKEITAMEPDGATPKLSPLWWAELEILSS 769 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~-----~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~~~ 769 (772)
+..+++++.+|+.+||+.||++|||+ +|+++ +|.+...+|+.++..+.
T Consensus 246 --p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~-------------Hp~f~~idw~~l~~~~~ 298 (304)
T 3ubd_A 246 --PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR-------------HSFFSTIDWNKLYRREI 298 (304)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT-------------SGGGTTCCHHHHHTTCS
T ss_pred --CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc-------------CccccCCCHHHHHhCCC
Confidence 22345678899999999999999985 45542 45666777887765443
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.1e-47 Score=418.37 Aligned_cols=239 Identities=20% Similarity=0.281 Sum_probs=200.5
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
++++++++|+|+||+||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..|
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ 224 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELW 224 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-----HHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEE
Confidence 4578899999999999999965 68999999987554322 346889999999999999999999999887 789
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
||||||++|+|.+++.. ..+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 225 iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999999853 45899999999999999999999998 999999999999999999999999998643
Q ss_pred -------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..|+..|||||++.+..|+.++|||||||++|||++|+.||... +..+....+..+..+.. ..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~--------~~ 369 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRL--------KN 369 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCC--------SC
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCC--------cc
Confidence 23567899999999999999999999999999999999999643 34444444443321111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++.++.+|+.+||+.||++|||+.|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1234567889999999999999999999876
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.2e-46 Score=397.06 Aligned_cols=242 Identities=18% Similarity=0.311 Sum_probs=188.4
Q ss_pred hccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC--
Q 004129 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP-- 553 (772)
Q Consensus 477 ~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~-- 553 (772)
++| ++++.+|+|+||+||+|+.. +++.||||++..... ....+++.+|+++|++++|||||++++++.+.+.
T Consensus 5 ~dy-~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 5 TDF-EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp HHE-EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred hhC-EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 344 77889999999999999964 688999999875432 2345679999999999999999999999875432
Q ss_pred --------ceEEEEEecCCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcE
Q 004129 554 --------FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAA 624 (772)
Q Consensus 554 --------~~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~ 624 (772)
...|+|||||++|+|.+++.... ....++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+
T Consensus 80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCE
T ss_pred cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcE
Confidence 13689999999999999996442 234677788899999999999999998 9999999999999999999
Q ss_pred EEccccCccCCC---------------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH
Q 004129 625 KISDFSFWNNTT---------------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL 683 (772)
Q Consensus 625 kL~DFGla~~~~---------------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~ 683 (772)
||+|||+++... .|+..|||||.+.+..|+.++|||||||++|||++ ||.... +.
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~ 233 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ER 233 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HH
Confidence 999999986432 36778999999999999999999999999999997 774221 11
Q ss_pred HHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 684 ENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......... ..+.......++..+|+.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~----------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTDVRNL----------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHTT----------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhcC----------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111111111 111222344556788999999999999999999876
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=384.66 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=195.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC----Cc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~----~~ 554 (772)
+++++.+|+|+||+||+|+. .+|+.||||++...... ....+.+.+|+++|++++|||||++++++.... ..
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV---VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc---hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 47889999999999999996 47899999998643321 233567899999999999999999999986432 12
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..|||||||+ |+|.+++. ....+++..+..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeee
Confidence 5799999995 78999985 3467999999999999999999999998 99999999999999999999999999864
Q ss_pred C-------------CCCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcc
Q 004129 635 T-------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKD 699 (772)
Q Consensus 635 ~-------------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~ 699 (772)
. ..++..|+|||++.+. .|+.++||||+||++|||+||+.||...+ ..+....+.... .+...
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChH
Confidence 2 2456789999998765 56999999999999999999999996433 233333322211 11111
Q ss_pred ccC---------------C----ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 700 IVD---------------P----TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ~~d---------------~----~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
... + .+....+..+.++.+|+.+||..||++|||+.|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 0 0001112235678999999999999999999999863
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.5e-42 Score=377.23 Aligned_cols=245 Identities=19% Similarity=0.327 Sum_probs=190.4
Q ss_pred ccccccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCC
Q 004129 478 DFSNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 478 ~f~~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+.+++++.+|+|+||+||+|+.+ .++.||+|++..... ..++.+|+++|.++ +|||||++++++.+.+
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-------PIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-------HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-------HHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 44588999999999999999853 467899998754321 24688999999998 6999999999999877
Q ss_pred CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccC
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 631 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kL~DFGl 631 (772)
+.++|||||++|+|.+++. .+++..+..++.|++.||+|||+++ ||||||||+|||++.+ +.+||+|||+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred --EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 7899999999999999983 4899999999999999999999998 9999999999999877 8999999999
Q ss_pred ccCC-------------------------------------CCCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCC
Q 004129 632 WNNT-------------------------------------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGR 673 (772)
Q Consensus 632 a~~~-------------------------------------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~ 673 (772)
|+.. ..++..|+|||++.+. .|+.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 8532 1367789999998765 5899999999999999999999
Q ss_pred CcccCCCCCHHHHHHHHhh--c-------------------CCCCcc---c------cC---Ccc----------ccccH
Q 004129 674 ISYSIENGSLENWASEYLK--G-------------------EQPLKD---I------VD---PTL----------KSFQE 710 (772)
Q Consensus 674 ~P~~~~~~~~~~~~~~~~~--~-------------------~~~~~~---~------~d---~~l----------~~~~~ 710 (772)
.||.....+.... ..+.. + ..+..+ . .+ +.. .....
T Consensus 245 ~Pf~~~~~~~~~l-~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 245 YPFYKASDDLTAL-AQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp SSSSCCSSHHHHH-HHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCHHHHH-HHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 9996544332211 11110 0 000000 0 00 000 00012
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++++.+|+.+||+.||++|||++|+++
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 23467889999999999999999999875
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.7e-42 Score=395.47 Aligned_cols=242 Identities=19% Similarity=0.226 Sum_probs=195.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +|+.||+|++.+...... ..........++++++.++|||||++++++.+.+ ..||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lyl 269 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSF 269 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEE
Confidence 78889999999999999965 689999999875432211 1111223344577788889999999999999887 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
|||||++|+|.++|.. ...+++..+..|+.||+.||+|||+++ ||||||||+|||||.+|.+||+|||+++..
T Consensus 270 VmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999999963 456999999999999999999999998 999999999999999999999999998632
Q ss_pred ----CCCCccccchhhhc-cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ----TAAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..|+..|+|||++. +..|+.++||||+||++|||+||+.||..... +..+........... ++
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~-----------~p 414 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-----------LP 414 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC-----------CC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC-----------CC
Confidence 34678999999996 45799999999999999999999999975433 333444444433222 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...+.++.+|+.+||+.||++|++ ++||.+
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 334577899999999999999998 677754
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2e-41 Score=365.72 Aligned_cols=267 Identities=31% Similarity=0.528 Sum_probs=218.2
Q ss_pred HHHHHhhccccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEc
Q 004129 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+++..+++| ++.+.+|+|+||+||+|+..+++.||||++..... ...+.+.+|++++++++||||+++++++..
T Consensus 33 ~~~~~~~~y-~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 33 DLEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-----QGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CCCCCCCCC-SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-----SHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred HHHHHHhcc-CccceeecCCCeeEEEEEECCCCEEEEEEecccCh-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 333444555 66788899999999999988899999998765432 234679999999999999999999999987
Q ss_pred CCCceEEEEEecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
.+ ..++||||+++|+|.+++.... ...++|..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 107 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 107 RN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp TT--CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECC
T ss_pred CC--eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEee
Confidence 76 5699999999999999986432 235899999999999999999999988 99999999999999999999999
Q ss_pred ccCccCCC-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCC----CCHHHHHHHHhhc
Q 004129 629 FSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN----GSLENWASEYLKG 693 (772)
Q Consensus 629 FGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~----~~~~~~~~~~~~~ 693 (772)
||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... .....|.......
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 99876322 13457899999988999999999999999999999999996432 2344444333222
Q ss_pred CCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 694 EQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 694 ~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+...+++... ......+.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 263 -GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp -TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 334455555443 355778899999999999999999999999999999987654
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.1e-41 Score=390.35 Aligned_cols=241 Identities=21% Similarity=0.296 Sum_probs=201.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +|+.||+|++..... ...+.+.+|+++|++++|||||++++++.+.+ ..+|
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~i 231 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-----SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVM 231 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-----hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEE
Confidence 478889999999999999964 689999999865432 23467889999999999999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC--CcEEEccccCccCCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED--YAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~--~~~kL~DFGla~~~~ 636 (772)
|||||++|+|.+++.. ....+++..+..|+.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 232 v~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999853 3456899999999999999999999998 9999999999999854 899999999987543
Q ss_pred --------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||++.+..|+.++||||+||++|||++|+.||.. .+..+....+......... ..
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~--~~~~~~~~~i~~~~~~~~~-------~~ 379 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--ENDDETLRNVKSCDWNMDD-------SA 379 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHTTCCCCCS-------GG
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHhCCCCCCc-------cc
Confidence 356789999999999999999999999999999999999964 3444555555444322211 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+++++.+||.+||+.||++|||+.|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1234567889999999999999999999986
No 21
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.3e-40 Score=354.55 Aligned_cols=276 Identities=29% Similarity=0.512 Sum_probs=225.8
Q ss_pred CCCCCHHHHHHHhhccccc-----cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCC
Q 004129 464 VPKLKRSELEAACEDFSNI-----IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH 538 (772)
Q Consensus 464 ~~~~~~~el~~~~~~f~~i-----ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H 538 (772)
...++..++.+++++|... ...+|+|+||+||+|+. ++..+|||++...... ......+.|.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI-TTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS-CTTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc-chHHHHHHHHHHHHHHHhcCC
Confidence 4568899999999998622 26789999999999987 5788999988653221 123345789999999999999
Q ss_pred CcccceeEEEEcCCCceEEEEEecCCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 539 KNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 539 pNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
|||+++++++.+.+ ..++||||+++|+|.+++... ....++|..+..|+.|++.||+|||+.+ |+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEE
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEE
Confidence 99999999998876 569999999999999998643 2456999999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCC--CCHH
Q 004129 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLE 684 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~ 684 (772)
+++++.+||+|||+++... .++..|+|||.+.+ .++.++|||||||++|||+||+.||.... ....
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 9999999999999875322 34567999998764 58899999999999999999999997432 2233
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+..........+.+.+++.+........+++.+++.+||+.||++||++.||++.|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 44444444434445556666666677888999999999999999999999999999998764
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.5e-41 Score=362.70 Aligned_cols=273 Identities=29% Similarity=0.555 Sum_probs=221.4
Q ss_pred CCCCCHHHHHHHhhccccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccc
Q 004129 464 VPKLKRSELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 464 ~~~~~~~el~~~~~~f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
...++..++....++| ++.+.+|+|+||+||+|+..++..||||++....... ....|.+|++++++++||||++
T Consensus 17 ~~~~~~~~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 17 LKRFSLRELQVASDNF-SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CEECCTHHHHTTTTSS-CSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred cceecHHHHHHHhhcc-ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch----HHHHHHHHHHHHHhccCCCccc
Confidence 4567788888877776 6778899999999999998889999999986543221 1236899999999999999999
Q ss_pred eeEEEEcCCCceEEEEEecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECC
Q 004129 544 LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 544 l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~ 620 (772)
+++++...+ ..++||||+++|+|.+++.... ...++|..+..|+.|++.||+|||+. .++|+||||||+|||++.
T Consensus 92 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 92 LRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred eEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 999998876 5689999999999999997542 34599999999999999999999997 123999999999999999
Q ss_pred CCcEEEccccCccCCC----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccC------CCCCHH
Q 004129 621 DYAAKISDFSFWNNTT----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSI------ENGSLE 684 (772)
Q Consensus 621 ~~~~kL~DFGla~~~~----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~------~~~~~~ 684 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.. ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999986322 245679999999888899999999999999999999999951 223444
Q ss_pred HHHHHHhhcCCCCccccCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004129 685 NWASEYLKGEQPLKDIVDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
+|+...... .......+.... ........++.+++.+||+.||++|||+.||++.|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 554443332 233444444433 45677889999999999999999999999999999874
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-40 Score=356.86 Aligned_cols=251 Identities=26% Similarity=0.399 Sum_probs=201.4
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+. .+..||||++..... .....++|.+|++++++++|||||++++++...+ ..++||
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF---HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVT 113 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEE
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEE
Confidence 6788999999999999987 578899998865432 2334567999999999999999999999998776 569999
Q ss_pred ecCCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 561 EYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 9999999999986432 23489999999999999999999998878999999999999999999999999987532
Q ss_pred -----CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004129 636 -----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 636 -----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+........... ...+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~---------~~~~~ 262 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKR---------LEIPR 262 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCC---------CCCCT
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCC---------CCCCc
Confidence 23456799999999999999999999999999999999999633 333333332211111 01223
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.++.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999999999987653
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=357.25 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=200.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||+||+|+.. +++.+|+|++.... ....+.|.+|++++++++||||+++++++.+++ ..++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 85 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFI 85 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEE
Confidence 56788999999999999975 58889999874322 334578999999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 86 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999864 3456999999999999999999999998 999999999999999999999999987532
Q ss_pred -------------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHH---HHHHHHhhc
Q 004129 636 -------------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE---NWASEYLKG 693 (772)
Q Consensus 636 -------------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~---~~~~~~~~~ 693 (772)
..++..|+|||.+.+..++.++|||||||++|||++|..|+........ .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 2355679999999999999999999999999999999998853211100 000000000
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..++.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 243 -------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 243 -------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 012233457889999999999999999999999999987653
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.5e-40 Score=362.76 Aligned_cols=249 Identities=23% Similarity=0.404 Sum_probs=202.6
Q ss_pred cccccccccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcC
Q 004129 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
++.+.+|+|+||+||+|+.. ++..||||++.... .....+++.+|+++++++ +|||||++++++.+.
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC----BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc----CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 67788999999999999863 34579999886432 233456799999999999 899999999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 160 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIl 235 (370)
T 2psq_A 160 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVL 235 (370)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEE
T ss_pred C--CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhEE
Confidence 6 5699999999999999997532 235899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004129 618 LTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEE 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGG
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHH
Confidence 9999999999999986322 12346999999999999999999999999999999 999996432 222
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.......+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 314 ~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 314 LFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHHHHTTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 3322222211 11223445678999999999999999999999999999876543
No 26
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=360.83 Aligned_cols=270 Identities=24% Similarity=0.370 Sum_probs=207.8
Q ss_pred cccccccccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcC
Q 004129 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
.+.+.+|+|+||+||+|+.. .+..||||++.... .....+++.+|+++++++ +|||||++++++...
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc----CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 67788999999999999853 23579999876432 233456799999999999 999999999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++.... ...+++..++.|+.|++.||+|||+.+ |+||||||+|||
T Consensus 148 ~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIl 223 (382)
T 3tt0_A 148 G--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVL 223 (382)
T ss_dssp S--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEE
T ss_pred C--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceEE
Confidence 7 5699999999999999997543 235899999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004129 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
+++++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||.. ....+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~--~~~~~ 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEE 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--CCHHH
Confidence 99999999999999864321 2346899999999999999999999999999999 9999953 33444
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHh
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELE 765 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~ 765 (772)
.......+... ..+..++.++.+++.+||+.||++||++.||++.|+++.............+.++.+.+
T Consensus 302 ~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T 3tt0_A 302 LFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDYD 371 (382)
T ss_dssp HHHHHHTTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC-------------
T ss_pred HHHHHHcCCCC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccCC
Confidence 44443333211 11123456788999999999999999999999999999998888777777777777776
Q ss_pred hhccc
Q 004129 766 ILSSE 770 (772)
Q Consensus 766 ~~~~~ 770 (772)
+.+.+
T Consensus 372 ~~~~~ 376 (382)
T 3tt0_A 372 IPTTE 376 (382)
T ss_dssp -----
T ss_pred CCCCC
Confidence 65543
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.3e-40 Score=353.49 Aligned_cols=250 Identities=21% Similarity=0.328 Sum_probs=198.3
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC--ceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP--FTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~--~~~~L 558 (772)
++++.+|+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++..... ...++
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 67889999999999999876 7899999885432 223456679999999999999999999987542 24699
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC----------CCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------TPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~----------~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
||||+++|+|.++++. ..++|..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999953 3589999999999999999999998 6 99999999999999999999999
Q ss_pred ccCccCC-----------CCCCccccchhhhcc-----CCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-----------
Q 004129 629 FSFWNNT-----------TAAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENG----------- 681 (772)
Q Consensus 629 FGla~~~-----------~~~~~~~~apE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~----------- 681 (772)
||+++.. ..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9998431 234667999999876 3456788999999999999999999964321
Q ss_pred ---CHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 682 ---SLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 682 ---~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
....+........ ..+.+.. .....+.++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKK------KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhccc------CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 2222222222111 1111111 12356678999999999999999999999999999987653
No 28
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.4e-40 Score=364.64 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=202.3
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|++. ++..||||.+.... .....++|.+|+++|++++|||||+++|++...+ ..++|
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 190 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIV 190 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS----CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEE
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEE
Confidence 67788999999999999986 78899999876432 1234457899999999999999999999998776 46999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~-- 637 (772)
|||+++|+|.++++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999999964 3345899999999999999999999998 99999999999999999999999999864321
Q ss_pred ---------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ---------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.+..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+.. . .
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~-~---------~ 335 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL--SNQQTREFVEKGGR-L---------P 335 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--CHHHHHHHHHTTCC-C---------C
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-C---------C
Confidence 1235899999998899999999999999999999 99999643 22222222222211 1 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+..+++++.++|.+||+.||++|||+.++++.|+++.+.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1233456788999999999999999999999999998764
No 29
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1e-39 Score=342.11 Aligned_cols=251 Identities=22% Similarity=0.361 Sum_probs=204.0
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. +..+|||++..... .....+.|.+|++++++++||||+++++++.+.+....++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW---STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC---CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 67788999999999999986 88899999875432 233456799999999999999999999999876333679999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----C
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT----T 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~----~ 636 (772)
||+++|+|.+++.......+++..+..|+.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+.... .
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 168 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR 168 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCc
Confidence 999999999999755445699999999999999999999998888999999999999999999999988875432 2
Q ss_pred CCCccccchhhhccCCCCC---CCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004129 637 AAKTGSAAMELLETSAVDL---ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ~~~~~~~apE~~~~~~~s~---ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++. ++|||||||++|||+||+.||... +..+............ ..+...+
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~ 237 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--SNMEIGMKVALEGLRP---------TIPPGIS 237 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--CHHHHHHHHHHSCCCC---------CCCTTCC
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--ChHHHHHHHHhcCCCC---------CCCCCCC
Confidence 3466899999987665554 799999999999999999999633 3333333333221110 1123345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 678999999999999999999999999998754
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=352.33 Aligned_cols=249 Identities=21% Similarity=0.320 Sum_probs=203.8
Q ss_pred cccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+.. .+..||||++.... .....+.|.+|++++++++|||||++++++.+.+ ..
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 67788999999999999974 34569999886432 2334568999999999999999999999998776 56
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.++++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999999853 3356999999999999999999999998 9999999999999999999999999986432
Q ss_pred C------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+...
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~------- 273 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRL------- 273 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCC-------
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCC-------
Confidence 1 1235999999998999999999999999999999 99999532 333333333332111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..+..++.++.+++.+||+.||++||++.||++.|+.+.+....
T Consensus 274 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 ---PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ---CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 11233456788999999999999999999999999998876543
No 31
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.9e-40 Score=369.91 Aligned_cols=245 Identities=22% Similarity=0.360 Sum_probs=204.5
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|++.++..||||++..... ..+.|.+|+++|++++|||||++++++.. + ..++||
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~ 261 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM------SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 261 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCCc------cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEE
Confidence 67788999999999999998889999999864321 24679999999999999999999999874 3 358999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
|||++|+|.++++......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999997554456899999999999999999999988 99999999999999999999999999874321
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||.. .+..+.......+... ..+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~--~~~~~~~~~i~~~~~~----------~~~ 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG--MSNPEVIRALERGYRM----------PRP 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHHHHHHHHTCCC----------CCC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCCCC----------CCC
Confidence 2346999999998999999999999999999999 9999963 2333444433333111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+++++.++|.+||+.||++||||.+|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 345578899999999999999999999999999986643
No 32
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-39 Score=339.19 Aligned_cols=244 Identities=20% Similarity=0.354 Sum_probs=203.5
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVF 84 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEecccccC------HHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEE
Confidence 678889999999999999988999999998643321 357999999999999999999999998876 579999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999999853 3456899999999999999999999988 9999999999999999999999999886332
Q ss_pred ------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+....++.++||||+|+++|||+| |+.||.. ....+.......+.... .+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~--~~~~~~~~~~~~~~~~~----------~~ 229 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSEVVEDISTGFRLY----------KP 229 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC--CCHHHHHHHHhcCccCC----------CC
Confidence 12346999999999999999999999999999999 9999953 33344444433331111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22346788999999999999999999999999998763
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.7e-39 Score=346.88 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=205.8
Q ss_pred CCCCHHHHHHHhhcc---------ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHh
Q 004129 465 PKLKRSELEAACEDF---------SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLS 534 (772)
Q Consensus 465 ~~~~~~el~~~~~~f---------~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~ 534 (772)
+.++.++++++++.. .+....+|+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 457788888887652 345567899999999999976 7899999998654322 2457889999999
Q ss_pred ccCCCcccceeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCC
Q 004129 535 KVNHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSS 614 (772)
Q Consensus 535 ~l~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~ 614 (772)
+++|||||++++++...+ ..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~ 170 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSD 170 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHH
Confidence 999999999999999877 6799999999999999885 346899999999999999999999988 999999999
Q ss_pred CeEECCCCcEEEccccCccCCC---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004129 615 SIYLTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 615 NILld~~~~~kL~DFGla~~~~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
|||++.++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~ 248 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQ 248 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHH
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHH
Confidence 9999999999999999875322 3456799999999999999999999999999999999999643 3333
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..........+. .. .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~-------~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 249 AMKRLRDSPPPK-------LK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHSSCCC-------CT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcCCCCC-------cC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 333333322111 10 112345678899999999999999999999863
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.2e-39 Score=349.11 Aligned_cols=239 Identities=21% Similarity=0.347 Sum_probs=200.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+. .+++.||||++...... ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 91 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYL 91 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEE
Confidence 37788999999999999997 57899999998654322 334567899999999999999999999998876 6899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999999854 356899999999999999999999998 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCCC-CCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++ .++||||+||++|||+||+.||.. .+..+.......+.....
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~~p----------- 234 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--QNLKELRERVLRGKYRIP----------- 234 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC-----------
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC-----------
Confidence 356679999999888775 789999999999999999999953 345555555555433221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2234678899999999999999999999864
No 35
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.8e-39 Score=337.40 Aligned_cols=245 Identities=19% Similarity=0.374 Sum_probs=202.2
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVT 82 (268)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC------HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred eeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEE
Confidence 678899999999999999998889999998654322 356899999999999999999999998776 579999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999998643 345899999999999999999999988 99999999999999999999999998763322
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~----------~~ 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRLY----------RP 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------CC
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCCC----------CC
Confidence 2235999999998899999999999999999999 99999533 3333333333332111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
...++++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 223457889999999999999999999999999987643
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.3e-40 Score=349.86 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=199.5
Q ss_pred ccccccccccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||+||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 47889999999999999985 367889999886432 23356799999999999999999999999764322
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 468999999999999998643 345899999999999999999999988 99999999999999999999999999864
Q ss_pred CCC------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHH-------------HHHH
Q 004129 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN-------------WASE 689 (772)
Q Consensus 635 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~-------------~~~~ 689 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||..|+......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 321 223489999999999999999999999999999999987522110000 0111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..... .....+..+++++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 244 ~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 LLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhcc---------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11110 111123345678999999999999999999999999999987643
No 37
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.4e-39 Score=343.27 Aligned_cols=254 Identities=20% Similarity=0.342 Sum_probs=206.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. ++..+|+|.+....... ....+.|.+|++++.+++||||+++++++...+ ..++
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 88 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYL 88 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEE
Confidence 477889999999999999964 68899999886543322 344578999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999999863 346899999999999999999999998 9999999999999999999999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............+ ......
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~------~~~~~~ 236 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--AVSIAIKHIQDSVP------NVTTDV 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--HHHHHHHHHSSCCC------CHHHHS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhhccCC------Ccchhc
Confidence 24567999999999999999999999999999999999996432 23333333322111 001112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhhhcCC
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 749 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 749 (772)
....++.+.+++.+||+.||++|| +++++.+.|+.+.....
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 234557788999999999999998 99999999998766544
No 38
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.5e-39 Score=344.61 Aligned_cols=238 Identities=21% Similarity=0.293 Sum_probs=196.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++...... ..+.+.+|+.++++++|||||++++++...+ ..++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 94 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWV 94 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEE
Confidence 36788899999999999985 57889999988654322 2356899999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999999853 35899999999999999999999998 999999999999999999999999987532
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............+. . ..+
T Consensus 170 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~--~------~~~ 239 (297)
T 3fxz_A 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPE--L------QNP 239 (297)
T ss_dssp TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHHCSCC--C------SCG
T ss_pred ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCCCC--C------CCc
Confidence 235567999999999999999999999999999999999996432 222222222221110 0 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 345567889999999999999999999986
No 39
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.7e-39 Score=348.24 Aligned_cols=239 Identities=20% Similarity=0.264 Sum_probs=198.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ......+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv 83 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFV 83 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEE
Confidence 67888999999999999965 68899999986532211 223457889999999999999999999999877 68999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999999853 356899999999999999999999998 9999999999999999999999999986421
Q ss_pred ------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004129 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+... ++.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~-----------~p~ 226 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILMEEIR-----------FPR 226 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCC-----------CCT
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-----------CCC
Confidence 2355799999999999999999999999999999999999643 344444444443222 122
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004129 711 NVLEELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
..+.++.+++.+||+.||++|| ++.|+++.
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 3456788999999999999999 89998763
No 40
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-39 Score=368.00 Aligned_cols=244 Identities=24% Similarity=0.407 Sum_probs=203.2
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|++. +..||||.++... ..+.|.+|+++|++++|||||++++++...+. ..++||
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~ 266 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 266 (450)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEE
T ss_pred EEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEE
Confidence 67788999999999999986 7799999886432 23579999999999999999999999876543 469999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
|||++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 344 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCccccccccc
Confidence 9999999999997655556899999999999999999999998 9999999999999999999999999986432
Q ss_pred --CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004129 637 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..+..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+....+..+.. ...+..++
T Consensus 345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~----------~~~p~~~~ 412 (450)
T 1k9a_A 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK----------MDAPDGCP 412 (450)
T ss_dssp --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHHHHHHTTCC----------CCCCTTCC
T ss_pred CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC----------CCCCCcCC
Confidence 23457999999999999999999999999999999 9999964332 222223322211 11223456
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.++.++|.+||+.||++|||+.++++.|+++...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 7889999999999999999999999999998764
No 41
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.6e-39 Score=345.37 Aligned_cols=251 Identities=25% Similarity=0.457 Sum_probs=200.2
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
.+.+.+|+|+||+||+|+... .+++|+++.... .....+.|.+|++++++++||||+++++++..+. .++||
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~lv~ 110 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN---LAIVT 110 (307)
T ss_dssp CEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---CEEEE
T ss_pred EEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCc---EEEEE
Confidence 567889999999999998653 578887765332 2334568999999999999999999999886543 58999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999863 3457999999999999999999999998 9999999999999999999999999986321
Q ss_pred -------CCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 637 -------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 -------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..........+ .. .+.+.
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~-~~-----~~~~~ 260 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRG-YA-----SPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHT-CC-----CCCST
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcC-CC-----Ccchh
Confidence 3456799999985 66788999999999999999999999964332 22222222221 11 12222
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
.....+++++.+++.+||+.+|++||++.|+++.|+.+....+
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 2233455788999999999999999999999999999877553
No 42
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-38 Score=337.16 Aligned_cols=244 Identities=18% Similarity=0.350 Sum_probs=200.1
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+.+ ..++||
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 98 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIIT 98 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC------HHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEE
Confidence 678899999999999999998889999998654322 356899999999999999999999998776 579999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 99 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 99 EYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred eccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999998642 356999999999999999999999988 9999999999999999999999999886432
Q ss_pred ------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~----------~~ 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLY----------RP 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCC----------CC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCC----------CC
Confidence 22346999999998899999999999999999999 99999633 2333333333321111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...++++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 22346788999999999999999999999999988654
No 43
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.5e-39 Score=341.08 Aligned_cols=251 Identities=27% Similarity=0.438 Sum_probs=201.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhh--hHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK--NLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~--~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+++.+.+|+|+||+||+|+. .+++.||+|++.......... ...+.+.+|++++++++||||+++++++.+..
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 96 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP---- 96 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----
Confidence 36788899999999999997 478899999886543322111 01167999999999999999999999986644
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSF 631 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kL~DFGl 631 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+++|+||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 699999999999988853 345799999999999999999999998877999999999999988776 99999999
Q ss_pred ccCCC------CCCccccchhhh--ccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 632 WNNTT------AAKTGSAAMELL--ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~------~~~~~~~apE~~--~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+ ....++.++|||||||++|||+||+.||.................... +
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------~ 249 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR------P 249 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC------C
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC------C
Confidence 86433 245678999998 455678999999999999999999999976554444433333322111 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 12234457789999999999999999999999999864
No 44
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=350.41 Aligned_cols=238 Identities=18% Similarity=0.330 Sum_probs=196.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||||++....... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~----~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~l 85 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS----DLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFM 85 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch----HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEE
Confidence 47888999999999999996 578899999986543221 2346889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 86 VLEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred EEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999999853 346899999999999999999999998 9999999999999999999999999875432
Q ss_pred --------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 637 --------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.++..|+|||.+.+..+ +.++||||+||++|||+||+.||.. .+..+....+..+.....
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~~p--------- 230 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--DNVMALYKKIMRGKYDVP--------- 230 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---------
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC---------
Confidence 24567999999987775 8999999999999999999999963 345555555555433222
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 231 --~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 --KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 2234567889999999999999999999874
No 45
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.5e-39 Score=366.40 Aligned_cols=247 Identities=21% Similarity=0.339 Sum_probs=203.9
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|++..+..||||++..... ..++|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~ 257 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 257 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEe
Confidence 56788999999999999998888899998864331 13579999999999999999999999876 3 358999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999997555567999999999999999999999988 99999999999999999999999999874321
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+....+..+... ..+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~----------~~~ 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRM----------PCP 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------CCC
Confidence 2346999999999999999999999999999999 99999532 333444433333111 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..+++++.++|.+||+.||++|||+.++++.|+++......
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 34557789999999999999999999999999998765443
No 46
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=341.13 Aligned_cols=262 Identities=18% Similarity=0.250 Sum_probs=207.9
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++........+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 3478889999999999999976 4889999988643321 1245688999999999999999999999876554679
Q ss_pred EEEecCCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEccccCc
Q 004129 558 MVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kL~DFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999997543 234999999999999999999999998 9999999999999 88889999999998
Q ss_pred cCCC--------CCCccccchhhhc--------cCCCCCCCcHHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcC
Q 004129 633 NNTT--------AAKTGSAAMELLE--------TSAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGE 694 (772)
Q Consensus 633 ~~~~--------~~~~~~~apE~~~--------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~ 694 (772)
+... .++..|+|||.+. +..++.++|||||||++|||+||+.||.... ....+.+.....+.
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 6432 2456899999875 5788999999999999999999999996322 23344444444432
Q ss_pred CCC--cccc---C---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 695 QPL--KDIV---D---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 695 ~~~--~~~~---d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+- ..+. . +............+.+++.+||+.||++|||++|+++...+...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 210 0000 0 11113446778889999999999999999999999998887544
No 47
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=343.54 Aligned_cols=252 Identities=25% Similarity=0.400 Sum_probs=200.3
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++|||||+++|++.+. .++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~lv~ 78 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-------SERKAFIVELRQLSRVNHPNIVKLYGACLNP----VCLVM 78 (307)
T ss_dssp EEEEEEECCSSSEEEEEEET-TEEEEEEECSST-------THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT----TEEEE
T ss_pred eeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----cEEEE
Confidence 67788899999999999975 688999987532 2346799999999999999999999988642 48999
Q ss_pred ecCCCCChhhhhhhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCC-CCeEeeCCCCCCeEECCCCc-EEEccccCccCCC-
Q 004129 561 EYSPNGSLFEHLHIQEA-EHLDWAMRLRIAMGMAYCLEHMHQLT-PPIAHRNLQSSSIYLTEDYA-AKISDFSFWNNTT- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~-~~l~~~~~~~Ia~~ia~gL~yLH~~~-~~IvHrDLKp~NILld~~~~-~kL~DFGla~~~~- 636 (772)
||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ .+|+||||||+|||++.++. +||+|||++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999964332 35789999999999999999999832 24999999999999988876 7999999975432
Q ss_pred -----CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004129 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 -----~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||................+..+ .....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 228 (307)
T 2eva_A 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP----------PLIKN 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC----------CCBTT
T ss_pred ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC----------Ccccc
Confidence 356689999999999999999999999999999999999975544443333333222111 11223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004129 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
.+.++.+++.+||+.||++|||+.|+++.|+.+.+..+....|
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 271 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence 4467889999999999999999999999999998776654443
No 48
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-39 Score=357.97 Aligned_cols=262 Identities=12% Similarity=0.154 Sum_probs=198.6
Q ss_pred ccccccccccceEEEEEEEEcC------CcEEEEEEeeecccchhh------hhHHHHHHHHHHHHhccCCCcccceeEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGY 547 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~------~~~vaVK~~~~~~~~~~~------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~ 547 (772)
+++.+.+|+|+||+||+|++.. ++.||||++......... ......+.+|+..+..++||||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 3778899999999999998765 367999987654321100 0011235567778888999999999999
Q ss_pred EEcCC--CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCc
Q 004129 548 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYA 623 (772)
Q Consensus 548 ~~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~ 623 (772)
+.... ....++||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+.+ |+||||||+|||++ .++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEESSCTTC
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEecCCCCe
Confidence 87642 12579999999 9999999864 3467999999999999999999999998 99999999999998 8899
Q ss_pred EEEccccCccCCC----------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHH-
Q 004129 624 AKISDFSFWNNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENW- 686 (772)
Q Consensus 624 ~kL~DFGla~~~~----------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~- 686 (772)
+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.....+....
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 9999999985321 15668999999999999999999999999999999999997433322111
Q ss_pred -HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 687 -ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 687 -~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
...... ..+..++++.+. ...++.++.+++..||+.||++||++.+|++.|+++.....
T Consensus 273 ~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 273 DSKIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111111 111111111110 02235678999999999999999999999999999877543
No 49
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.3e-39 Score=355.30 Aligned_cols=245 Identities=20% Similarity=0.332 Sum_probs=194.3
Q ss_pred cccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|+.. .+..||||++.... .....++|.+|++++++++|||||+++|++.+.+ ..
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 121 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY----TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PV 121 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ce
Confidence 56778899999999999865 56789999886432 2334568999999999999999999999998876 56
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.++++. ....+++..+..|+.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999999963 3456899999999999999999999988 9999999999999999999999999986432
Q ss_pred C------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... +..+.......+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~-------- 268 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYR-------- 268 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEE--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC--------
Confidence 1 1235999999999999999999999999999998 99999533 33333333322210
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...+..++.++.+++.+||+.||++||++.||++.|+++..
T Consensus 269 --~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 269 --LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 01122345678899999999999999999999999998754
No 50
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=351.13 Aligned_cols=238 Identities=18% Similarity=0.256 Sum_probs=197.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+.+|.+++..+ +|||||++++++.+.+ ..++
T Consensus 26 ~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 101 (353)
T 3txo_A 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ--DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFF 101 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc--hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEE
Confidence 77889999999999999965 57899999987542211 22345688999999988 7999999999998877 6899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999999999853 356899999999999999999999998 999999999999999999999999998742
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++||||+||++|||+||+.||.. .+..+....+..+.... +
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--~~~~~~~~~i~~~~~~~-----------p 244 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA--ENEDDLFEAILNDEVVY-----------P 244 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC-----------C
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCC-----------C
Confidence 2356689999999988999999999999999999999999964 34455555555543322 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSM------RGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~------~evl~ 739 (772)
.....++.+++.+||+.||++||++ .|+++
T Consensus 245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2234678899999999999999998 66664
No 51
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-38 Score=339.50 Aligned_cols=247 Identities=23% Similarity=0.367 Sum_probs=191.8
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc--cCCCcccceeEEEEcC--CCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEED--EPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~--l~HpNIV~l~g~~~~~--~~~~ 555 (772)
+++++.+|+|+||+||+|+. +++.||||++.... ...+.+|.+++.. ++||||+++++++... ....
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 36788999999999999988 58899999875422 2345566666665 7999999999987653 2225
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILld~~~~~kL~ 627 (772)
.++||||+++|+|.++++ ...+++..+..|+.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEEC
T ss_pred eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEe
Confidence 789999999999999984 346899999999999999999999 766 9999999999999999999999
Q ss_pred cccCccCC-------------CCCCccccchhhhccC------CCCCCCcHHHHHHHHHHHHcC----------CCcccC
Q 004129 628 DFSFWNNT-------------TAAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RISYSI 678 (772)
Q Consensus 628 DFGla~~~-------------~~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ELltG----------~~P~~~ 678 (772)
|||+++.. ..++..|+|||.+.+. .++.++|||||||++|||+|| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99987421 1456689999998766 455799999999999999999 788853
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004129 679 EN---GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
.. ....... ............ .........+.++.+++.+||+.||++|||+.||++.|+++
T Consensus 236 ~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMR-KVVCVDQQRPNI---PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHH-HHHTTSCCCCCC---CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhh-HHHhccCCCCCC---ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21 2222222 222111111100 01113356778999999999999999999999999999876
No 52
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-38 Score=340.90 Aligned_cols=238 Identities=19% Similarity=0.264 Sum_probs=198.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|+.+++.++|||||++++++.+.+ ..++|
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv 84 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMI 84 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEE
Confidence 67888999999999999975 68899999986532211 122456889999999999999999999998876 68999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 999999999999853 456899999999999999999999988 999999999999999999999999998643
Q ss_pred --CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004129 636 --TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 636 --~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+.... +....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 227 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAELRF-----------PPFFN 227 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHCCCCC-----------CTTSC
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCC-----------CCCCC
Confidence 23566899999999999999999999999999999999999643 3444444555443221 22344
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004129 714 EELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
.++.+++.+||+.||++|| +++|+++
T Consensus 228 ~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 6788999999999999999 8888875
No 53
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.8e-39 Score=350.06 Aligned_cols=244 Identities=20% Similarity=0.342 Sum_probs=191.8
Q ss_pred cccccccccceEEEEEEEEc-CCcE----EEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~----vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|++. ++.. |++|.+.... .....++|.+|++++++++|||||+++++|....
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 90 (327)
T 3poz_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---
T ss_pred ccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---
Confidence 67888999999999999964 4443 4666554321 1223467999999999999999999999998754
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++|+||+++|+|.+++.. ....+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred eEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 5799999999999999864 3456999999999999999999999998 999999999999999999999999987532
Q ss_pred C-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 636 T-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. .++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+.. .
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~-~------ 238 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER-L------ 238 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-C------
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCC-C------
Confidence 1 12347999999999999999999999999999999 99999643322 12222222211 1
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..+..++.+++.+||+.||++||++.|+++.|+.+..
T Consensus 239 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 ---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1122344678899999999999999999999999988754
No 54
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=349.27 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||.||+|+.. +++.||||.+.... .....+.|.+|++++++++||||+++++++...+
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 123 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK-- 123 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--
Confidence 67888999999999999975 34789999886432 2334568999999999999999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhhc----------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE----------------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~----------------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++.... ...+++..++.|+.||++||+|||+.+ |+|||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlk 201 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLA 201 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCC
Confidence 5699999999999999996532 156899999999999999999999998 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCC
Q 004129 613 SSSIYLTEDYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||++.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~- 280 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM- 280 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-
Confidence 99999999999999999987532 123446999999998999999999999999999999 99999533
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
...+.......+.. ...+..++.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 281 -~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 -AHEEVIYYVRDGNI----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -CHHHHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -ChHHHHHHHhCCCc----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33444433333321 1122334567899999999999999999999999999987644
No 55
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.2e-39 Score=352.54 Aligned_cols=259 Identities=20% Similarity=0.334 Sum_probs=203.8
Q ss_pred HHHHHHhhccccccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCccc
Q 004129 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFV 542 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV 542 (772)
.+++...++| ++.+.+|+|+||.||+|++ .+++.||||++..... ....+.+.+|++++.++ +|||||
T Consensus 15 ~~~~~~~~~y-~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 15 SKWEFPRDRL-KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp HHHBCCGGGE-EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccccccccce-eeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC----HHHHHHHHHHHHHHHhhcCCccee
Confidence 3333333343 7788999999999999974 2457899998864321 23356799999999999 899999
Q ss_pred ceeEEEEcCCCceEEEEEecCCCCChhhhhhhhcc---------------------------------------------
Q 004129 543 NLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEA--------------------------------------------- 577 (772)
Q Consensus 543 ~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------- 577 (772)
++++++.+.+. ..++||||+++|+|.++++....
T Consensus 90 ~~~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 90 NLLGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CEEEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999987553 36899999999999999964321
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC-
Q 004129 578 -------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA- 637 (772)
Q Consensus 578 -------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~- 637 (772)
..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 12889999999999999999999998 99999999999999999999999999864321
Q ss_pred ----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 638 ----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 638 ----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ........+...
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~---------- 315 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM---------- 315 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC----------
T ss_pred ccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC----------
Confidence 2335999999999999999999999999999999 999996543322 222222222111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+...+.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 316 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 11123446788999999999999999999999999998754
No 56
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.8e-39 Score=370.09 Aligned_cols=244 Identities=21% Similarity=0.359 Sum_probs=202.2
Q ss_pred cccccccccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|++.. +..||||.+..... ..++|.+|+++|++++|||||+++|+|...+ ..++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 667889999999999999764 78899998864322 1467999999999999999999999998876 46999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~-- 637 (772)
||||++|+|.+++.......+++..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999997655567999999999999999999999998 99999999999999999999999999865321
Q ss_pred --------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||..... .+.......+ ... ..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~-~~~---------~~ 440 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKD-YRM---------ER 440 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTT-CCC---------CC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC-CCC---------CC
Confidence 1236899999998999999999999999999999 9999964332 2222222221 110 12
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
+..+++++.+||.+||+.||++||||.||++.|+.+..
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 23455788999999999999999999999999998753
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.3e-38 Score=350.14 Aligned_cols=235 Identities=18% Similarity=0.280 Sum_probs=190.6
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|..++.++ +|||||++++++.+.+ ..++
T Consensus 55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 130 (396)
T 4dc2_A 55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 130 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEE
Confidence 77889999999999999975 57789999987543222 22234578899999887 8999999999998877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|..++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999999999863 356999999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC------CHHH-HHHHHhhcCCCCccccC
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG------SLEN-WASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~------~~~~-~~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+ ...........
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 280 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 280 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC------
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC------
Confidence 2345679999999999999999999999999999999999963221 1112 22223322211
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 281 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 223345678899999999999999986
No 58
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.3e-38 Score=347.65 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=201.3
Q ss_pred ccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 478 DFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 478 ~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.+++.+.+|+|+||+||+|+.. ++..+|+|.+........ .....+.+.+|++++.+++|||||++++++.+.+ .
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ 89 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--D 89 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--E
Confidence 44578889999999999999965 688999999876543221 1112467999999999999999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSF 631 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kL~DFGl 631 (772)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+++++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 899999999999999985 3456999999999999999999999998 99999999999998776 799999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+..+......
T Consensus 166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~---- 239 (361)
T 2yab_A 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDE---- 239 (361)
T ss_dssp CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCH----
T ss_pred ceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCc----
Confidence 86432 3566799999999999999999999999999999999999643 334444444443221110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......++++.+++.+||..||++|||+.|+++
T Consensus 240 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 240 ---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111234567889999999999999999999875
No 59
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-38 Score=339.77 Aligned_cols=262 Identities=11% Similarity=0.169 Sum_probs=207.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++.+.+|+|+||.||+|+. .+++.||||++..... .+.+.+|++++.++ +|+||+++++++.... ..+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~ 82 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNV 82 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeE
Confidence 36778899999999999995 5788999998754321 23578899999999 8999999999998777 679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccCc
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kL~DFGla 632 (772)
+||||+ +|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 83 lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999999 99999999643 446999999999999999999999988 999999999999987766 999999987
Q ss_pred cCCC----------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCC
Q 004129 633 NNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQ 695 (772)
Q Consensus 633 ~~~~----------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~ 695 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 5322 245679999999999999999999999999999999999975432 22222222211100
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHH
Q 004129 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAE 763 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~ 763 (772)
. .........+++++.+++.+||+.||++||++++|++.|+++...... ....+..|+.
T Consensus 239 ~------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~---~~~~~~dw~~ 297 (298)
T 1csn_A 239 S------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT---TEDENFDWNL 297 (298)
T ss_dssp H------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC---CSCSCCGGGC
T ss_pred C------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC---CCCCccccCC
Confidence 0 001111223457889999999999999999999999999998876543 2345677764
No 60
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.7e-38 Score=341.61 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=194.3
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+..+++.||+|++..... .....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 97 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLV 97 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEE
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc---cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEE
Confidence 478889999999999999998899999999865432 1233467899999999999999999999998776 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 98 FEFME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EECCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EcCCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 99997 588888753 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCC--cccc-----
Q 004129 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPL--KDIV----- 701 (772)
Q Consensus 637 ------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~--~~~~----- 701 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||...... ....+........+. ....
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 24567999999865 56899999999999999999999999754322 222222222111110 0000
Q ss_pred --------C-CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 702 --------D-PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 --------d-~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+ .......+...+++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0001112234567899999999999999999999986
No 61
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=353.32 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=200.6
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++++.+|+|+||+||+|++. ++..||||++.... ......++.+|+.++++++|||||++++++.+..
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc----ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 67889999999999999853 45689999885332 1334467999999999999999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhhc-----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEE
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE-----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kL 626 (772)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceEEE
Confidence 4599999999999999997543 245899999999999999999999998 99999999999999554 5999
Q ss_pred ccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004129 627 SDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 ~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGG 303 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCC
Confidence 999987521 123457999999999999999999999999999998 99999533 3344444433332
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.. ..+..++.++.+++.+||+.||++||++.||++.|+.+...
T Consensus 304 ~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 RM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11 11223446788999999999999999999999999988664
No 62
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-38 Score=336.51 Aligned_cols=248 Identities=22% Similarity=0.369 Sum_probs=202.8
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+..++..||+|.+..... ..+.|.+|++++++++||||+++++++.++ ..++||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 86 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIIT 86 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEE
Confidence 67888999999999999998888999998864321 135789999999999999999999998754 358999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999999996544447999999999999999999999998 99999999999999999999999998764321
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+... ..+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~ 232 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRM----------VRP 232 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------CCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCC----------CCc
Confidence 2336899999988889999999999999999999 99999532 333333333332111 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
..+++++.+++.+||+.||++|||+.++++.|+++......+
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 234567889999999999999999999999999987765543
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.3e-38 Score=346.59 Aligned_cols=247 Identities=16% Similarity=0.217 Sum_probs=197.8
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++++.+|+|+||+||+|+.. +++.||||++.............+.+.+|++++++++|||||++++++.+.+ ..+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~ 102 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLY 102 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3578889999999999999864 6889999998654322111112467999999999999999999999999877 679
Q ss_pred EEEecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCc
Q 004129 558 MVFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kL~DFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999998876432 345899999999999999999999998 999999999999986654 999999987
Q ss_pred cCCC---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 633 NNTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 633 ~~~~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ..+.......+..... +
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~----~ 253 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMN----P 253 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCC----H
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCC----c
Confidence 5322 3456799999999999999999999999999999999999643 2333333333322111 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 254 ---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 ---RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 011223567899999999999999999999985
No 64
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-38 Score=330.00 Aligned_cols=244 Identities=20% Similarity=0.343 Sum_probs=203.0
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||.||+|+..++..+|+|++...... .+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVT 82 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEE
Confidence 677889999999999999988889999998654321 257899999999999999999999998876 569999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99999999999864 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+.... .+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~----------~~ 227 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLY----------KP 227 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCC----------CC
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCC----------CC
Confidence 22346899999998899999999999999999999 89999532 3344444443332111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22346788999999999999999999999999998763
No 65
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.4e-39 Score=369.48 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=204.4
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|++..+..||||++..... ..++|.+|+++|++++|||||++++++.+ + ..++||
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~ 340 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 340 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEee
Confidence 67788999999999999998888899998864332 13579999999999999999999999876 3 458999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
|||++|+|.++++......+++..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999999997555567999999999999999999999988 99999999999999999999999999875421
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||.. ....+....+..+.. . ..+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~--~~~~~~~~~i~~~~~-~---------~~~ 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--MVNREVLDQVERGYR-M---------PCP 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT--CCHHHHHHHHHTTCC-C---------CCC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCCC-C---------CCC
Confidence 2346999999999999999999999999999999 9999953 233344443333211 0 112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+++++.+||.+||+.||++|||+.+|++.|+++....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 344567899999999999999999999999999986544
No 66
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.7e-38 Score=344.68 Aligned_cols=238 Identities=17% Similarity=0.263 Sum_probs=199.1
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 119 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMV 119 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEE
Confidence 67888999999999999975 68899999986543211 223457889999999999999999999999876 68999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 999999999999864 346899999999999999999999998 9999999999999999999999999986432
Q ss_pred ---CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004129 637 ---AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 ---~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+...+ +...+
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------p~~~~ 262 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGKVRF-----------PSHFS 262 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------CTTCC
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcCCCCC-----------CCCCC
Confidence 3456799999999999999999999999999999999999643 4445555555443221 22345
Q ss_pred HHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004129 714 EELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
.++.+++.+||+.||++||+ ++||++
T Consensus 263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 67889999999999999998 888765
No 67
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=341.17 Aligned_cols=246 Identities=18% Similarity=0.270 Sum_probs=199.4
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++.+.+|+|+||.||+|+.. ++..+|+|.+........ .....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 89 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DV 89 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EE
Confidence 3577889999999999999975 688999999876543211 1112467999999999999999999999998876 67
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCc
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFW 632 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kL~DFGla 632 (772)
++||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999985 3456999999999999999999999988 99999999999999887 8999999998
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 633 ~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+.............
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~------ 237 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFE------ 237 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCC------
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcC------
Confidence 6432 2456799999999899999999999999999999999999643 33333333333221111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......+.++.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 238 -DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111234567889999999999999999999986
No 68
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=344.60 Aligned_cols=239 Identities=17% Similarity=0.290 Sum_probs=191.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC------
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP------ 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~------ 553 (772)
++++.+|+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++|||||++++++.+...
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 67889999999999999976 789999999875432 2345679999999999999999999999865432
Q ss_pred -------------------------------------------------ceEEEEEecCCCCChhhhhhhhc-cCCCCHH
Q 004129 554 -------------------------------------------------FTRMMVFEYSPNGSLFEHLHIQE-AEHLDWA 583 (772)
Q Consensus 554 -------------------------------------------------~~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~ 583 (772)
...++||||+++|+|.+++.... ....++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 13799999999999999996542 2346777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---------------------CCCccc
Q 004129 584 MRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---------------------AAKTGS 642 (772)
Q Consensus 584 ~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---------------------~~~~~~ 642 (772)
.+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++... .++..|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 88999999999999999988 9999999999999999999999999876432 245679
Q ss_pred cchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHH
Q 004129 643 AAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKN 722 (772)
Q Consensus 643 ~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~ 722 (772)
+|||.+.+..++.++|||||||++|||+||..|+.. ........... ...........++.+++.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRNL----------KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHTT----------CCCHHHHHHCHHHHHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhcc----------CCCcccccCChhHHHHHHH
Confidence 999999999999999999999999999999876521 11111111111 1112234455678899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 004129 723 CVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 723 Cl~~dP~~RPs~~evl~ 739 (772)
||+.||++|||+.|+++
T Consensus 309 ~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHCSSGGGSCCHHHHHH
T ss_pred HccCCCCcCCCHHHHhh
Confidence 99999999999999986
No 69
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=342.05 Aligned_cols=241 Identities=17% Similarity=0.249 Sum_probs=198.9
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. ++..+|+|.+.... .....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~l 78 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVM 78 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEE
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEE
Confidence 467888999999999999965 57889999876432 22456889999999999999999999998877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEccccCccCCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kL~DFGla~~~~ 636 (772)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 9999999999999853 3346899999999999999999999998 999999999999987 7899999999986543
Q ss_pred C--------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 637 A--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 ~--------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+....+..+...... ..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 226 (321)
T 1tki_A 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDE-------EA 226 (321)
T ss_dssp TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCH-------HH
T ss_pred CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCCh-------hh
Confidence 2 455799999998888999999999999999999999999643 344445555444322110 01
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||..||++|||+.|+++.
T Consensus 227 ~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12345678999999999999999999999874
No 70
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.2e-38 Score=342.30 Aligned_cols=235 Identities=17% Similarity=0.273 Sum_probs=192.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|+.++.++ +|||||++++++.+.+ ..++
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 87 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFF 87 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEE
Confidence 67888999999999999975 57889999987543222 33456788999999988 8999999999998876 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999853 356899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-------CHHHHHHHHhhcCCCCccccC
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-------SLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-------~~~~~~~~~~~~~~~~~~~~d 702 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...+. ...............
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC------
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC------
Confidence 1346679999999999999999999999999999999999964211 111222222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 238 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 223345678899999999999999995
No 71
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.4e-38 Score=344.49 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=199.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+.. ++..+|+|++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~l 105 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 105 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 477888999999999999965 6889999998754322 234567999999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++..
T Consensus 106 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999998853 456899999999999999999999998 9999999999999865 45999999998643
Q ss_pred C--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+..... .+
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~---~~---- 252 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYP---SP---- 252 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---TT----
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCC---cc----
Confidence 2 3456799999999989999999999999999999999999643 33444444444422211 11
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.||++||++.|+++.
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112345678899999999999999999998864
No 72
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.4e-39 Score=347.70 Aligned_cols=239 Identities=22% Similarity=0.330 Sum_probs=194.7
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||+||+|+. .+++.||+|++....... ......+.+|+++++.++|||||++++++...+ ..++
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~l 86 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVM 86 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 46788999999999999996 578899999886432211 122357899999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 7899998854 356899999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..+ +.++|||||||++|||+||+.||...... .....+.......+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------------~~~~~i~~~~~~~p 228 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-------------NLFKKVNSCVYVMP 228 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-------------TCBCCCCSSCCCCC
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-------------HHHHHHHcCCCCCc
Confidence 34568999999987776 68999999999999999999999643211 11111111112233
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 4456778899999999999999999999864
No 73
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.7e-39 Score=348.73 Aligned_cols=244 Identities=20% Similarity=0.340 Sum_probs=193.1
Q ss_pred cccccccccceEEEEEEEEc-CCcE----EEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVE----IAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~----vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+.. ++.. +++|.+...... ...+.+.+|+.++++++|||||++++++.+. .
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 88 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---S 88 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---S
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---c
Confidence 67888999999999999964 4443 666665432211 1124578899999999999999999998643 4
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence 68999999999999998643 346889999999999999999999998 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------- 236 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERL------- 236 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBC-------
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC-------
Confidence 21 2336999999999999999999999999999999 99999644322 222222222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+.+..
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 ---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111233467789999999999999999999999998754
No 74
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.2e-38 Score=338.72 Aligned_cols=239 Identities=19% Similarity=0.275 Sum_probs=190.1
Q ss_pred cccccccccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|+|+||.||+|+. .+++.+|+|++....... .......+.+|++++++++|||||++++++...+ ..
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 96 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KL 96 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--CE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EE
Confidence 7788999999999999997 478899999987543211 1223456889999999999999999999998877 67
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~- 635 (772)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999999853 346889999999999999999999998 999999999999999999999999987632
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||... +..+....+.......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~---------- 240 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLNL---------- 240 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCC----------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCC----------
Confidence 23566799999999889999999999999999999999999643 3344444444432221
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+.....++.+++.+||+.||++|| ++.|+++
T Consensus 241 -p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 -PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 223446788999999999999999 7778765
No 75
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.6e-39 Score=343.95 Aligned_cols=247 Identities=23% Similarity=0.374 Sum_probs=200.3
Q ss_pred cccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.+.+.+|+|+||.||+|+. .++..||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA----SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC----CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 6778899999999999986 234789999886432 2334567999999999999999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhhcc----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEA----------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~----------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+|||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dik 177 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLA 177 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCCS
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Ccccccc
Confidence 56999999999999999964322 24889999999999999999999998 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCC-----------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCC
Q 004129 613 SSSIYLTEDYAAKISDFSFWNNTT-----------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kL~DFGla~~~~-----------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||+++++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999876332 12345899999988899999999999999999999 999996433
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
. .........+.. ...+..+++++.+++.+||+.||++||++.|+++.|+++...
T Consensus 258 ~--~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 P--ERLFNLLKTGHR----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G--GGHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H--HHHHHHhhcCCc----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2 222222222211 011233456789999999999999999999999999998654
No 76
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.3e-38 Score=349.08 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=196.2
Q ss_pred cccccccccc--ceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 480 SNIIGSFSDG--TVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G--~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
+++++.+|+| +||+||+|+.. +++.||||++..... .....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 101 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC---SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--EL 101 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EE
Confidence 4778899999 99999999976 689999999875432 2334567899999999999999999999999877 67
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~- 635 (772)
++|||||++|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 99999999999999997655567999999999999999999999998 999999999999999999999999976321
Q ss_pred ---------------CCCCccccchhhhcc--CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC-C
Q 004129 636 ---------------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP-L 697 (772)
Q Consensus 636 ---------------~~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~-~ 697 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ......+..+ .
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 257 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCL 257 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC--------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcc
Confidence 134456899999977 6799999999999999999999999964332111 1111100000 0
Q ss_pred ------------------------ccc----------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 698 ------------------------KDI----------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ------------------------~~~----------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.+. .+............++.+|+.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0000001223345679999999999999999999999864
No 77
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.3e-39 Score=344.78 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=193.5
Q ss_pred cccccccccceEEEEEEEEcCCc----EEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc--
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGV----EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-- 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~----~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~-- 554 (772)
++.+.+|+|+||+||+|+..... .||||++...... ....++|.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 67888999999999999865432 7899988653221 23356899999999999999999999999875421
Q ss_pred --eEEEEEecCCCCChhhhhhhhc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 555 --TRMMVFEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 555 --~~~LV~Ey~~~GsL~~~L~~~~----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCCCEEEee
Confidence 2389999999999999986432 225899999999999999999999998 99999999999999999999999
Q ss_pred ccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCC
Q 004129 629 FSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQP 696 (772)
Q Consensus 629 FGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~ 696 (772)
||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.......+...
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~ 258 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRL 258 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCC
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHHhcCCCC
Confidence 999864321 2336899999999999999999999999999999 9999964332 2222223222111
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+...+.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 259 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 259 ----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 112334567899999999999999999999999999987643
No 78
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-38 Score=332.82 Aligned_cols=246 Identities=24% Similarity=0.396 Sum_probs=191.4
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||+||+|+.. +..+|||++........ ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 85 (271)
T 3dtc_A 10 TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDI-SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVM 85 (271)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEE
T ss_pred eeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccH-HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEE
Confidence 66788999999999999975 78899998865432221 222467899999999999999999999998876 569999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCC-CeEeeCCCCCCeEECC--------CCcEEEccccC
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTP-PIAHRNLQSSSIYLTE--------DYAAKISDFSF 631 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~-~IvHrDLKp~NILld~--------~~~~kL~DFGl 631 (772)
||+++|+|.+++. ...+++..+..++.|++.||+|||+.+. +|+||||||+|||++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999884 3568999999999999999999999773 4999999999999986 67899999999
Q ss_pred ccCC-------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 632 WNNT-------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 632 a~~~-------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
++.. ..++..|+|||.+.+..++.++||||||+++|||+||+.||.... ...............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~------- 233 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLAVAYGVAMNKLAL------- 233 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHTSCCCC-------
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHhhhcCCCCC-------
Confidence 8642 234567999999999999999999999999999999999996432 222222222221110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEI 744 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i 744 (772)
..+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 234 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 --PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11233456788999999999999999999999999864
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=351.20 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=198.6
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .++..+|+|++..+... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 87 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYL 87 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH---HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEE
Confidence 47788999999999999985 46889999988765432 234567999999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||+++..
T Consensus 88 v~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999853 456999999999999999999999998 99999999999998 5688999999998543
Q ss_pred C---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 636 T---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 ~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
. .++..|+|||.+.+..++.++||||+||++|||++|+.||... +..+.......+...... +..
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~---~~~- 237 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPS---PEW- 237 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCT---TTT-
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCc---ccc-
Confidence 2 3466899999999999999999999999999999999999543 344444444444322211 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...++++.+++.+||+.||++|||+.|+++.
T Consensus 238 ---~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 238 ---DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2334678899999999999999999999863
No 80
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.7e-38 Score=338.66 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=200.1
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc--eE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF--TR 556 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~--~~ 556 (772)
+++.+.+|+|+||.||+|+. .+++.||||++......+ ......|.+|++++.+++|||||++++++...... ..
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS--HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC--HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 47788999999999999996 578899999986543222 34456799999999999999999999998764322 34
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 899999999999999863 346899999999999999999999998 9999999999999999999999999986422
Q ss_pred ------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 637 ------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 ------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+..............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~----- 240 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--SPVSVAYQHVREDPIPPS----- 240 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCCCCCHH-----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCCCCcc-----
Confidence 2466799999999999999999999999999999999999543 333333333333211110
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHHhhhhcCCC
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRG-IAAKLKEITAMEPD 750 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-vl~~L~~i~~~~~~ 750 (772)
......+.++.+++.+||+.||++||++.+ +...+..+....+.
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~ 285 (311)
T 3ork_A 241 --ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPP 285 (311)
T ss_dssp --HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCC
T ss_pred --cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCC
Confidence 111234567889999999999999996555 55666666554443
No 81
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-38 Score=342.84 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=193.3
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||||++..+... ...+.+.+|+.++++++|||||++++++.+.+ ..++|
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv 83 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 83 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEE
Confidence 77889999999999999965 7889999998654322 22356889999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 84 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 99999999999985 3345899999999999999999999988 999999999999999999999999998532
Q ss_pred -------CCCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 -------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..+ +.++|||||||++|||+||+.||.........+... ....... .
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-~~~~~~~----~----- 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYL----N----- 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH-HTTCTTS----T-----
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-hcccccC----C-----
Confidence 235667999999977665 789999999999999999999997544433322221 1111110 0
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.......++.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 112345677899999999999999999999864
No 82
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.7e-39 Score=346.20 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=203.4
Q ss_pred ccccccccccceEEEEEEEEc-----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.++++.+|+|+||+||++.+. +++.||||++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA----GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc----ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 478899999999999998753 67889999986432 233456799999999999999999999999886544
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred eEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 67999999999999999853 34899999999999999999999998 99999999999999999999999998864
Q ss_pred CCC------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHH------------HHHHH
Q 004129 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN------------WASEY 690 (772)
Q Consensus 635 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~------------~~~~~ 690 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||+.||......... .....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 322 233589999999889999999999999999999999998532111000 01111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..... ....+..++.++.+++.+||+.||++|||+.|+++.|+++.+....
T Consensus 264 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 264 LERGE---------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred Hhccc---------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 11110 1112234557899999999999999999999999999998776544
No 83
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9e-39 Score=352.65 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=194.3
Q ss_pred cccccccccceEEEEEEEEc--CC--cEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS--SG--VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~--~~--~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++. ++ ..+|||.+.... .....++|.+|+.++++++|||||+++++|...+. ..
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~ 166 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 166 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS----CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CC
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-Ce
Confidence 45678899999999999864 22 357777765322 12345789999999999999999999999865432 46
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccc
Confidence 899999999999999953 3456899999999999999999999998 9999999999999999999999999986331
Q ss_pred -------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004129 637 -------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 637 -------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.++..|+|||.+.+..++.++|||||||++|||+| |..||...... +.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~------ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRL------ 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCC------
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCC------
Confidence 12236999999999999999999999999999999 67777543221 112222222111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCC
Q 004129 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 752 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 752 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++........
T Consensus 316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 0122345678899999999999999999999999999987665543
No 84
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.5e-38 Score=336.72 Aligned_cols=256 Identities=20% Similarity=0.340 Sum_probs=202.4
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+. .+++.||+|++......+ ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 109 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNI 109 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEE
Confidence 36788899999999999996 478899999886533222 334567999999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999998642 3456899999999999999999999998 9999999999999999999999999875432
Q ss_pred ---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 637 ---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 637 ---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||...................+ ...
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~------ 259 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--PLP------ 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSC--CCC------
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCC--CCc------
Confidence 245578999999989999999999999999999999999976555555554444332211 110
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
....+.++.+++.+||+.||++||++.+|++.|+++.+....
T Consensus 260 -~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 -SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 123446788999999999999999999999999999876544
No 85
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.7e-38 Score=342.97 Aligned_cols=238 Identities=16% Similarity=0.219 Sum_probs=196.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..++
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~l 98 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 98 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEE
Confidence 77889999999999999976 47789999886543211 22345688999999988 8999999999998877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999999863 346899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||.. .+..+....+......+ +
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--~~~~~~~~~i~~~~~~~-----------p 241 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVAY-----------P 241 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCC-----------C
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCCC-----------C
Confidence 2346679999999999999999999999999999999999964 34445555555443221 2
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPS-----MRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs-----~~evl~ 739 (772)
...+.++.+++.+||+.||++||+ ++|+.+
T Consensus 242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 234567889999999999999995 466654
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=349.06 Aligned_cols=240 Identities=20% Similarity=0.310 Sum_probs=195.6
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+|+|++....... ....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 18 ~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv 93 (384)
T 4fr4_A 18 EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMV 93 (384)
T ss_dssp EEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEE
Confidence 77889999999999999965 57889999886543211 223467889999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999985 3456999999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 ----TAAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ----~~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+. +..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~----------- 238 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT----------- 238 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-----------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC-----------
Confidence 23566799999986 34589999999999999999999999975433 333333333332211
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPS-MRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs-~~evl~ 739 (772)
++...+.++.+++.+||+.||++||+ +.++.+
T Consensus 239 ~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 22334567899999999999999998 666653
No 87
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2e-38 Score=345.99 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=195.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..++
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~l 95 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFF 95 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEE
Confidence 67888999999999999975 67889999986542211 12235678899999887 9999999999999877 6899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999999853 356899999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+....+..+.... +
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 238 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDNPFY-----------P 238 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------C
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 12456799999999999999999999999999999999999643 3444444444432221 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMR-GIA 738 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~-evl 738 (772)
...+.++.+++.+||+.||++||++. |+.
T Consensus 239 ~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23446788999999999999999997 554
No 88
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.8e-38 Score=335.41 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=201.7
Q ss_pred cccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCC
Q 004129 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+. .+++.||||.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh----HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 6778899999999999985 3467899998864321 23356799999999999 9999999999998877
Q ss_pred ceEEEEEecCCCCChhhhhhhhcc----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEA----------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~----------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 101 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil 177 (313)
T 1t46_A 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNIL 177 (313)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEE
T ss_pred -CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEE
Confidence 56999999999999999965432 24899999999999999999999988 999999999999
Q ss_pred ECCCCcEEEccccCccCCCCC-----------CccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004129 618 LTEDYAAKISDFSFWNNTTAA-----------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~~~-----------~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++..... +..|+|||.+.+..++.++|||||||++|||+| |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~ 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H
Confidence 999999999999998654321 235899999999999999999999999999999 999996443321 1
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
........... . .+...+.++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 257 -~~~~~~~~~~~--~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 257 -FYKMIKEGFRM--L-------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp -HHHHHHHTCCC--C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred -HHHHhccCCCC--C-------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 11222211110 0 112344678899999999999999999999999998876543
No 89
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=336.02 Aligned_cols=244 Identities=21% Similarity=0.251 Sum_probs=189.9
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh---------------------hhhHHHHHHHHHHHHhccC
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---------------------SKNLESQFRKKIDTLSKVN 537 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~---------------------~~~~~~~f~~Ei~~L~~l~ 537 (772)
+++.+.+|+|+||.||+|+.. +++.||||++........ .....+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 367888999999999999864 678899999865432110 0112356899999999999
Q ss_pred CCcccceeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 538 HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
||||+++++++.+......++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil 169 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLL 169 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEE
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEE
Confidence 999999999998744346899999999999988753 356999999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCC---------CCCccccchhhhccCC---CCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004129 618 LTEDYAAKISDFSFWNNTT---------AAKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~---------~~~~~~~apE~~~~~~---~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++... .++..|+|||.+.+.. ++.++|||||||++|||++|+.||... ....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~ 247 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE--RIMC 247 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--SHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--cHHH
Confidence 9999999999999876432 3456799999987654 378899999999999999999999643 3334
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+............. ....++++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQALEFPD---------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCCCCCCS---------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhcccCCCCC---------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 33333332211110 1123467889999999999999999999875
No 90
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.7e-38 Score=337.43 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=197.0
Q ss_pred cccccccccccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC
Q 004129 479 FSNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
++++++.+|+|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 357889999999999999984 3678999999864432 2224678999999999999999999999987643
Q ss_pred ceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccc
Confidence 367999999999999999853 3456899999999999999999999988 9999999999999999999999999875
Q ss_pred CCC------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCC------------CCHHHHHHH
Q 004129 634 NTT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN------------GSLENWASE 689 (772)
Q Consensus 634 ~~~------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~------------~~~~~~~~~ 689 (772)
... .++..|+|||.+.+..++.++||||||+++|||+||+.|+.... .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 432 12335899999998899999999999999999999998864210 000111111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhh
Q 004129 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEIT 745 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~ 745 (772)
...... ....+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 255 ~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 11122345578899999999999999999999999999874
No 91
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.8e-38 Score=342.52 Aligned_cols=248 Identities=12% Similarity=0.167 Sum_probs=199.9
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+. .+++.||||.+..... .+.+.+|+++++++ +||||+++++++...+ ..++
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~l 82 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAM 82 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEE
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEE
Confidence 6778899999999999995 5788999998764432 13588999999999 9999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc-----EEEccccCcc
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA-----AKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~-----~kL~DFGla~ 633 (772)
||||+ +|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99999 99999998643 457999999999999999999999998 999999999999998887 9999999986
Q ss_pred CC----------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCC-CCHHHHHHHHhhcCCC
Q 004129 634 NT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQP 696 (772)
Q Consensus 634 ~~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~-~~~~~~~~~~~~~~~~ 696 (772)
.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....+..........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 32 234567999999999999999999999999999999999997543 2333333322211100
Q ss_pred CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 697 LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 697 ~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.. ........+ ++.+++..||+.||.+||++.+|.+.|+++....
T Consensus 239 ~~------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 239 TP------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp SC------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CC------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 000111133 8999999999999999999999999999876643
No 92
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3e-38 Score=335.58 Aligned_cols=249 Identities=26% Similarity=0.480 Sum_probs=193.8
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++.+.+|+|+||+||+|+... .+|+|++...... ....+.|.+|++++++++||||+++++++... ..++|
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv 97 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIV 97 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEE
Confidence 3678889999999999998653 5899988654322 33456799999999999999999999977543 35899
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999853 3456899999999999999999999988 9999999999999999999999999876322
Q ss_pred --------CCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 637 --------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 --------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||.... ...........+.. .+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSL------SPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSC------CCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhccccc------Ccch
Confidence 2456799999986 6678889999999999999999999996432 22222222222211 1112
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
......++.++.+++.+||+.||++||++.|+++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22233456789999999999999999999999999998764
No 93
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.7e-38 Score=347.54 Aligned_cols=240 Identities=20% Similarity=0.256 Sum_probs=188.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHH-HhccCCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~-L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.+|+|++....... ......+.+|..+ ++.++|||||++++++.+.+ ..++
T Consensus 41 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~l 116 (373)
T 2r5t_A 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYF 116 (373)
T ss_dssp EEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEE
Confidence 67888999999999999975 57889999987654322 2234556777776 57789999999999999877 7899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999853 356889999999999999999999998 999999999999999999999999998642
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||++|+.||.. .+..+....+......+ +
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--~~~~~~~~~i~~~~~~~-----------~ 259 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--RNTAEMYDNILNKPLQL-----------K 259 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--SBHHHHHHHHHHSCCCC-----------C
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHHhcccCC-----------C
Confidence 2346679999999999999999999999999999999999964 33444455555442211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
.....++.+++.+||+.||++||++.+.++.+
T Consensus 260 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 22346788999999999999999986544443
No 94
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.6e-39 Score=360.85 Aligned_cols=250 Identities=18% Similarity=0.267 Sum_probs=197.5
Q ss_pred HhhccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC
Q 004129 475 ACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 475 ~~~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
.+++| ++++.+|+|+||+||+|+.. +++.+|+|++....... ......+.+|+.++..++|||||++++++.+.+
T Consensus 72 ~~~~y-~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~- 147 (437)
T 4aw2_A 72 HREDF-EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK--RAETACFREERDVLVNGDSKWITTLHYAFQDDN- 147 (437)
T ss_dssp CGGGE-EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS-
T ss_pred Chhhe-EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-
Confidence 34455 77889999999999999976 46789999886432211 112234889999999999999999999999877
Q ss_pred ceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
..++|||||++|+|.+++.. ....+++..+..++.|++.||+|||+.+ ||||||||+|||++.++.+||+|||+++
T Consensus 148 -~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 148 -NLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp -EEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 78999999999999999963 2456999999999999999999999988 9999999999999999999999999985
Q ss_pred CC----------CCCCccccchhhhc-----cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004129 634 NT----------TAAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 634 ~~----------~~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
.. ..++..|+|||.+. ...|+.++|||||||++|||+||+.||... +..+....++......
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~- 300 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERF- 300 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC-
T ss_pred hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccc-
Confidence 32 24567899999986 567899999999999999999999999643 3333333333211000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004129 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
..+......++++.+|+.+||..+|++ ||+++|+++.
T Consensus 301 -----~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 301 -----QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -----CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -----cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 001111224567889999999888888 9999999863
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.5e-38 Score=334.88 Aligned_cols=249 Identities=19% Similarity=0.286 Sum_probs=193.9
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+++++.+|+|+||+||+|+..+++.+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 78 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLV 78 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEE
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEE
Confidence 3678889999999999999988999999998654322 122356889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 79 FEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp EECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred EEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 999975 99888853 3356899999999999999999999988 999999999999999999999999987532
Q ss_pred -----CCCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCCCc---c-----
Q 004129 636 -----TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQPLK---D----- 699 (772)
Q Consensus 636 -----~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~~~---~----- 699 (772)
..++..|+|||.+.+ ..++.++||||+||++|||+||+.||.... ..+....... +..... .
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhhhccc
Confidence 134567999999865 458999999999999999999999996432 2222222221 100000 0
Q ss_pred ccCCcc--------ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 700 IVDPTL--------KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l--------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..++.. .......++++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001110 1112334577889999999999999999999975
No 96
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.4e-38 Score=341.56 Aligned_cols=251 Identities=23% Similarity=0.405 Sum_probs=202.6
Q ss_pred cccccccccceEEEEEEEEc--------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcC
Q 004129 481 NIIGSFSDGTVGTVYKGTLS--------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEED 551 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~--------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~ 551 (772)
++.+.+|+|+||+||+|+.. ++..||||++.... .....+.+.+|+++++++ +||||+++++++...
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC----cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 67788999999999999863 46789999886432 233456799999999999 999999999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeE
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIY 617 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NIL 617 (772)
+ ..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+|||
T Consensus 114 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIl 189 (334)
T 2pvf_A 114 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVL 189 (334)
T ss_dssp S--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEE
T ss_pred C--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceEE
Confidence 6 56999999999999999964321 34899999999999999999999998 999999999999
Q ss_pred ECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHH
Q 004129 618 LTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLEN 685 (772)
Q Consensus 618 ld~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~ 685 (772)
++.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~ 267 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEE 267 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHH
Confidence 99999999999998753321 2346999999988889999999999999999999 99999533 3344
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCC
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDG 751 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 751 (772)
.......+... ..+..++.++.+++.+||+.||++||++.|+++.|+++.......
T Consensus 268 ~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 268 LFKLLKEGHRM----------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp HHHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCCCC----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 44333333211 112234567889999999999999999999999999998765543
No 97
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=344.25 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=191.2
Q ss_pred cccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEEe
Q 004129 483 IGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+.+|+|+||.||+|+. .++..||+|++..... ...+.|.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E 166 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-----KDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVME 166 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-----ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 45689999999999996 4688999998875432 23467999999999999999999999999877 6799999
Q ss_pred cCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE--CCCCcEEEccccCccCCC---
Q 004129 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL--TEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl--d~~~~~kL~DFGla~~~~--- 636 (772)
|+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 167 ~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 167 YVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999998863 3346899999999999999999999998 9999999999999 677899999999986432
Q ss_pred -----CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004129 637 -----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 -----~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+....++.++|||||||++|||+||+.||... +..+....+........ +. ....
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~~---~~----~~~~ 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--NDAETLNNILACRWDLE---DE----EFQD 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCSC---SG----GGTT
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhccCCCC---hh----hhcc
Confidence 2566799999999889999999999999999999999999643 33444444444322211 11 1123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 712 VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.++++.+++.+||+.||++||++.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4567899999999999999999999987
No 98
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-38 Score=341.59 Aligned_cols=251 Identities=21% Similarity=0.330 Sum_probs=197.1
Q ss_pred cccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCC
Q 004129 481 NIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+. ..+..||||.+..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 6778899999999999996 2456799998864321 22346799999999999 9999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhhcc---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCC
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEA---------------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQ 612 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLK 612 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+|||||
T Consensus 123 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dik 199 (344)
T 1rjb_A 123 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLA 199 (344)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCS
T ss_pred -ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCC
Confidence 56999999999999999964322 24899999999999999999999988 9999999
Q ss_pred CCCeEECCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCC
Q 004129 613 SSSIYLTEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIEN 680 (772)
Q Consensus 613 p~NILld~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~ 680 (772)
|+|||++.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999864321 1235999999988999999999999999999998 999996543
Q ss_pred CCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 681 GSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
... ............ ..+...++++.+++.+||+.||++|||+.|+++.|+.+.+..+.
T Consensus 280 ~~~--~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VDA--NFYKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CSH--HHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cHH--HHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 321 122222221110 11123356788999999999999999999999999998776544
No 99
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.8e-38 Score=341.60 Aligned_cols=254 Identities=15% Similarity=0.210 Sum_probs=196.7
Q ss_pred HHHHhhccccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEc
Q 004129 472 LEAACEDFSNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 472 l~~~~~~f~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+....++| ++.+.+|+|+||+||+|+. .++..+|+|++.............+.+.+|++++++++|||||++++++.+
T Consensus 21 ~~~~~~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 21 LLELQKKY-HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp HHHHHHHE-EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhe-eecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 33344444 7888999999999999996 467789999886543222223445789999999999999999999999988
Q ss_pred CCCceEEEEEecCCCCChhhhhhhhc--------------------------------------cCCCCHHHHHHHHHHH
Q 004129 551 DEPFTRMMVFEYSPNGSLFEHLHIQE--------------------------------------AEHLDWAMRLRIAMGM 592 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------------------------------~~~l~~~~~~~Ia~~i 592 (772)
.+ ..++||||+++|+|.+++.... ...+++..+..|+.|+
T Consensus 100 ~~--~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 100 EQ--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp SS--EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred CC--eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 76 6799999999999999884210 1123566778899999
Q ss_pred HHHHHHHhcCCCCeEeeCCCCCCeEECCCC--cEEEccccCccCC-------------CCCCccccchhhhcc--CCCCC
Q 004129 593 AYCLEHMHQLTPPIAHRNLQSSSIYLTEDY--AAKISDFSFWNNT-------------TAAKTGSAAMELLET--SAVDL 655 (772)
Q Consensus 593 a~gL~yLH~~~~~IvHrDLKp~NILld~~~--~~kL~DFGla~~~-------------~~~~~~~~apE~~~~--~~~s~ 655 (772)
+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.. ..++..|+|||.+.+ ..++.
T Consensus 178 ~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 178 FSALHYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHHTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHHCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 99999999998 99999999999998766 8999999988532 224567999999865 67899
Q ss_pred CCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHH
Q 004129 656 ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMR 735 (772)
Q Consensus 656 ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ 735 (772)
++|||||||++|||+||+.||... ...+............. .+ .....+.++.+++.+||+.||++||++.
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ 326 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGV--NDADTISQVLNKKLCFE---NP----NYNVLSPLARDLLSNLLNRNVDERFDAM 326 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCTT---SG----GGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCC--ChHHHHHHHHhcccccC---Cc----ccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999999999999999999533 33344444444322211 11 1122456788999999999999999999
Q ss_pred HHHH
Q 004129 736 GIAA 739 (772)
Q Consensus 736 evl~ 739 (772)
|+++
T Consensus 327 ~~l~ 330 (345)
T 3hko_A 327 RALQ 330 (345)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9987
No 100
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.7e-39 Score=356.56 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=195.8
Q ss_pred hccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 477 EDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 477 ~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++| ++++.+|+|+||+||+|+.. +++.+|+|++....... ....+.+.+|++++..++|||||++++++.+.+ .
T Consensus 69 ~~y-~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~ 143 (410)
T 3v8s_A 69 EDY-EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--Y 143 (410)
T ss_dssp GGE-EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--E
T ss_pred ccc-EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh--hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--E
Confidence 444 77889999999999999975 57889999886432111 111235889999999999999999999999877 7
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.++++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 144 ~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 8999999999999999853 35899999999999999999999998 999999999999999999999999998532
Q ss_pred ----------CCCCccccchhhhccCC----CCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004129 636 ----------TAAKTGSAAMELLETSA----VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ----------~~~~~~~~apE~~~~~~----~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
..++..|+|||.+.... ++.++|||||||++|||+||+.||... +..+....++.+.....
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~--- 293 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLT--- 293 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCC---
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhcccccc---
Confidence 23567899999987655 889999999999999999999999643 33444444433211000
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 004129 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQ--RPSMRGIAAK 740 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~evl~~ 740 (772)
-+. ....+.++.+|+.+||+.+|++ ||+++||++.
T Consensus 294 ~p~----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 FPD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCT----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCC----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000 0123467889999999999988 9999999864
No 101
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.8e-38 Score=342.40 Aligned_cols=241 Identities=19% Similarity=0.249 Sum_probs=196.3
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||||++....... ....+++.+|++++++++|||||++++++...+ ..++|
T Consensus 57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 132 (348)
T 1u5q_A 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLV 132 (348)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEE
Confidence 6678899999999999996 578899999986543222 334467999999999999999999999998877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||++ |+|.+++.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp EECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 99997 788888753 3457999999999999999999999998 9999999999999999999999999986543
Q ss_pred --CCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHH
Q 004129 637 --AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQEN 711 (772)
Q Consensus 637 --~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 711 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||... +..........+..+. .. ...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--~~~~~~~~~~~~~~~~--~~-------~~~ 277 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHIAQNESPA--LQ-------SGH 277 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--CC-------CTT
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhcCCCC--CC-------CCC
Confidence 3566899999984 577899999999999999999999999533 3333344444332211 11 122
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 712 VLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 712 ~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.++++.+++.+||+.||++|||+.|+++.
T Consensus 278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 278 WSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 34678899999999999999999999864
No 102
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=347.53 Aligned_cols=261 Identities=14% Similarity=0.187 Sum_probs=204.0
Q ss_pred ccccccccccceEEEEEEEEcC---------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccc-------
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSS---------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVN------- 543 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~---------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~------- 543 (772)
+++.+.+|+|+||+||+|+... ++.||+|.+... +.+.+|++++++++|||||+
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 4778899999999999999764 788999987632 35789999999999999998
Q ss_pred --------eeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCC
Q 004129 544 --------LIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSS 615 (772)
Q Consensus 544 --------l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~N 615 (772)
+++++...+. ..++||||+ +|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|
T Consensus 114 ~~~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~N 189 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAEN 189 (352)
T ss_dssp CTTCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGG
T ss_pred CCccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHH
Confidence 6777776332 679999999 999999997554567999999999999999999999998 9999999999
Q ss_pred eEECCCC--cEEEccccCccCCC----------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCccc
Q 004129 616 IYLTEDY--AAKISDFSFWNNTT----------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYS 677 (772)
Q Consensus 616 ILld~~~--~~kL~DFGla~~~~----------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~ 677 (772)
||++.++ .+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 99999999985322 34557899999999899999999999999999999999997
Q ss_pred CCCCCHHHHHH---HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCC
Q 004129 678 IENGSLENWAS---EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATP 754 (772)
Q Consensus 678 ~~~~~~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p 754 (772)
........... ...... ....+... .....+.++.+++.+||+.||++||++.||++.|+++...... .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~---~ 341 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKP---GPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV---S 341 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSC---CCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---C
T ss_pred cCCcCHHHHHHHHHhccCCh---hhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC---C
Confidence 54433322221 111111 11111110 0112346788999999999999999999999999998776542 2
Q ss_pred CCCCchHH
Q 004129 755 KLSPLWWA 762 (772)
Q Consensus 755 ~~~~~~~~ 762 (772)
...+..|.
T Consensus 342 ~~~~~dw~ 349 (352)
T 2jii_A 342 PYDPIGLP 349 (352)
T ss_dssp TTSCCCCC
T ss_pred cCccccCc
Confidence 23455554
No 103
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.1e-38 Score=337.56 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=182.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||+|++...... ...+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 81 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLV 81 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTT----CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEE
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc----ccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEE
Confidence 67788999999999999864 6889999998754322 12356889999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhc----cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 560 FEYSPNGSLFEHLHIQE----AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~----~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
|||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 99998 69999986432 245899999999999999999999988 999999999999999999999999997642
Q ss_pred C---------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCC--C-ccc
Q 004129 636 T---------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP--L-KDI 700 (772)
Q Consensus 636 ~---------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~--~-~~~ 700 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+.. +... . ...
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGGG
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhhh
Confidence 2 24567999999875 468999999999999999999999996433 2222222221 1000 0 000
Q ss_pred -----cCCccc-------------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 -----VDPTLK-------------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 -----~d~~l~-------------~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+... ........++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 011123467899999999999999999999976
No 104
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=343.75 Aligned_cols=242 Identities=17% Similarity=0.286 Sum_probs=197.8
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.+|+|.+..... .....+.+|+++|++++|||||++++++.+.+ ..++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~l 125 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-----LDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVL 125 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-----HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-----hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEE
Confidence 478889999999999999975 678899988764331 22457899999999999999999999998876 6899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC--CCcEEEccccCccCCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTT 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--~~~~kL~DFGla~~~~ 636 (772)
||||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999999853 2346899999999999999999999998 999999999999974 5789999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+.............. ..
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 273 (387)
T 1kob_A 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDE-------DA 273 (387)
T ss_dssp TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCCCCS-------ST
T ss_pred CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCc-------cc
Confidence 3466799999999999999999999999999999999999643 333444444433221111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 12345678899999999999999999999863
No 105
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=342.60 Aligned_cols=244 Identities=20% Similarity=0.352 Sum_probs=193.0
Q ss_pred cccccccccceEEEEEEEEc-CCcEE----EEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEI----AVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~v----aVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+.. ++..+ ++|.+.... .....+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 90 (327)
T 3lzb_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp EEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS----SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---
T ss_pred eEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---
Confidence 67889999999999999964 44444 555543221 1223467999999999999999999999998754
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++|+||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~~~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred ceEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 5899999999999999864 3456899999999999999999999998 999999999999999999999999998643
Q ss_pred CC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 636 TA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 ~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.......+.. .
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~-~------ 238 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER-L------ 238 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC-C------
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC-C------
Confidence 21 2336999999999999999999999999999999 99999643322 22222222211 0
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 239 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 ---PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 1122344678899999999999999999999999998764
No 106
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=368.44 Aligned_cols=241 Identities=19% Similarity=0.305 Sum_probs=198.6
Q ss_pred cccccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEEe
Q 004129 485 SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 485 ~lg~G~fg~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
.+|+|+||.||+|.+. ++..||||+++.... ....++|.+|+++|++++|||||+++|+|..+ ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEE
Confidence 6899999999999864 456799998865422 22346799999999999999999999999763 4799999
Q ss_pred cCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC----
Q 004129 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA---- 637 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~---- 637 (772)
||++|+|.+++.. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 416 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 9999999999863 3456999999999999999999999998 99999999999999999999999999875421
Q ss_pred --------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 638 --------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 638 --------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+....+..+.. ...
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~----------~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKR----------MEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTTCC----------CCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC----------CCC
Confidence 1246999999999999999999999999999998 999996433 2333333333321 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+..++.++.++|.+||+.||++||++.+|++.|+.+...
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 234567899999999999999999999999999987554
No 107
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=336.07 Aligned_cols=253 Identities=19% Similarity=0.324 Sum_probs=199.1
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC--CCceE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
+++++.+|+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .....
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 36788999999999999996 578899999886532 23456799999999999999999999998732 22257
Q ss_pred EEEEecCCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 557 MMVFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 8999999999999998643 3467999999999999999999999998 99999999999999999999999998764
Q ss_pred CCC------------------CCccccchhhhccCC---CCCCCcHHHHHHHHHHHHcCCCcccC---CCCCHHHHHHHH
Q 004129 635 TTA------------------AKTGSAAMELLETSA---VDLESNVYSFGTILFEMITGRISYSI---ENGSLENWASEY 690 (772)
Q Consensus 635 ~~~------------------~~~~~~apE~~~~~~---~s~ksDVwSfGvvL~ELltG~~P~~~---~~~~~~~~~~~~ 690 (772)
... ++..|+|||.+.... ++.++|||||||++|||++|+.||.. ........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---- 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA---- 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH----
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH----
Confidence 321 255799999986543 78999999999999999999999953 11121111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCC
Q 004129 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGA 752 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 752 (772)
....... ......+.++.+++.+||+.||++||++.|+++.|+.+....+.+.
T Consensus 260 ~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 260 VQNQLSI---------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp HHCC--C---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred hhccCCC---------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 1111100 0112334678899999999999999999999999999877666543
No 108
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=346.89 Aligned_cols=263 Identities=18% Similarity=0.245 Sum_probs=209.2
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++...+....+
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 3577889999999999999976 4889999998643321 1245688999999999999999999999876544679
Q ss_pred EEEecCCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEEEccccCc
Q 004129 558 MVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAKISDFSFW 632 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~kL~DFGla 632 (772)
+||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999996543 234999999999999999999999998 9999999999999 78888999999998
Q ss_pred cCC--------CCCCccccchhhhcc--------CCCCCCCcHHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcC
Q 004129 633 NNT--------TAAKTGSAAMELLET--------SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGE 694 (772)
Q Consensus 633 ~~~--------~~~~~~~~apE~~~~--------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~ 694 (772)
+.. ..++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ....+.+.....+.
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 643 234668999998764 567889999999999999999999996422 33344555555443
Q ss_pred CCC--ccc---cC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 695 QPL--KDI---VD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 695 ~~~--~~~---~d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+. ... .+ +............+.+++.+||+.||++||+++|+++.++++...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 210 000 00 111124467788899999999999999999999999999887654
No 109
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.4e-38 Score=353.76 Aligned_cols=239 Identities=20% Similarity=0.251 Sum_probs=190.6
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. +++.||||++...... .......+.+|++++++++|||||++++++...+ ..++
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~l 225 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCF 225 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEE
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh--hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEE
Confidence 377889999999999999964 6889999998643211 1223456889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999999853 3568999999999999999999997 87 999999999999999999999999998642
Q ss_pred -------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||... +..+............
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~----------- 368 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILMEEIRF----------- 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCCCCC-----------
Confidence 23466899999999999999999999999999999999999533 3444444444433221
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
+...+.++.+++.+||+.||++|| +++|+++
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 223446788999999999999999 9999986
No 110
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.8e-38 Score=331.71 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=193.3
Q ss_pred cccccccccceEEEEEEEEcC-C-------cEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS-G-------VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE 552 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~-~-------~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~ 552 (772)
++.+.+|+|+||+||+|+... + ..+++|.+.... ....+.|.+|++++++++||||+++++++.+++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 677889999999999998653 2 468888875432 223467999999999999999999999998876
Q ss_pred CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--------E
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--------A 624 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--------~ 624 (772)
..++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++. +
T Consensus 86 --~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 --ENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp --CCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred --CCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCccccccccee
Confidence 568999999999999999643 344899999999999999999999998 999999999999998877 9
Q ss_pred EEccccCccCCCC-----CCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004129 625 KISDFSFWNNTTA-----AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 625 kL~DFGla~~~~~-----~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
||+|||++..... ++..|+|||.+.+ ..++.++|||||||++|||+||..|+.... ....... .........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~~~~-~~~~~~~~~ 238 (289)
T 4fvq_A 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQRKLQ-FYEDRHQLP 238 (289)
T ss_dssp EECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHH-HHHTTCCCC
T ss_pred eeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chHHHHH-HhhccCCCC
Confidence 9999999865433 3457999999876 779999999999999999999655543222 2222221 122211111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
. ..+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 239 ~-----------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 239 A-----------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp C-----------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred C-----------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 1134578899999999999999999999999998664
No 111
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=336.43 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=194.5
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc---CCCcccceeEEEEcCCC--
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEEDEP-- 553 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~~~~-- 553 (772)
+++++.+|+|+||+||+|+. .+++.||+|++...............+.+|+++++++ +||||+++++++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 47888999999999999995 5688999999875443221122224566777777666 49999999999986542
Q ss_pred -ceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 554 -FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 554 -~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
...++||||+. |+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 24689999996 69999997655556999999999999999999999998 999999999999999999999999998
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCCCccc--
Q 004129 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI-- 700 (772)
Q Consensus 633 ~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~-- 700 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+....+... ..+....
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSCS
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChhhccc
Confidence 6432 23557899999999999999999999999999999999996433 22222222211 1110000
Q ss_pred --------cC----CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 --------VD----PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 --------~d----~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .......++..+++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0001112234577899999999999999999999986
No 112
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.6e-38 Score=339.02 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=199.6
Q ss_pred ccccccccccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||.||+|++ .++..||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 37788999999999999984 367889999886432 23346799999999999999999999998865444
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred eEEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEccccccee
Confidence 689999999999999998643 345899999999999999999999988 99999999999999999999999998764
Q ss_pred CC------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH------------HHHHHHH
Q 004129 635 TT------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL------------ENWASEY 690 (772)
Q Consensus 635 ~~------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~------------~~~~~~~ 690 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||....... .......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 32 12334899999998889999999999999999999999985321110 0001111
Q ss_pred hhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 691 LKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 691 ~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
..... ....+..+++++.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 257 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 257 LEEGQ---------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred hhccc---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 11100 1112234557889999999999999999999999999998765543
No 113
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.5e-38 Score=332.46 Aligned_cols=250 Identities=17% Similarity=0.213 Sum_probs=194.1
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... ....+.+.+|++++++++|||||++++++.+++ ..++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 78 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTL 78 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEE
Confidence 367888999999999999975 6788999998754322 334567889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++ ++.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 79 v~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 79 VFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp EEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred EEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9999975 66666542 3467999999999999999999999998 9999999999999999999999999986432
Q ss_pred -------CCCccccchhhhccCC-CCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CCCcccc------
Q 004129 637 -------AAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QPLKDIV------ 701 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~------ 701 (772)
.++..|+|||.+.+.. ++.++|||||||++|||+||..||.... +..+......... .+.....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-SHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-CHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 2355799999987665 8999999999999999999988864332 3333333332210 0000000
Q ss_pred -----------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 702 -----------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 -----------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.............++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00111122345677889999999999999999999986
No 114
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.7e-38 Score=335.98 Aligned_cols=246 Identities=20% Similarity=0.335 Sum_probs=192.7
Q ss_pred ccccccccccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++.+.+|+|+||+||+|+... +..+|+|...... .....+.|.+|+.++++++||||+++++++.++ .
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~ 89 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---P 89 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---S
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---c
Confidence 3677889999999999998743 4568888765322 233456799999999999999999999998543 3
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp CEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred cEEEEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECcccccccc
Confidence 5899999999999999863 3346899999999999999999999988 999999999999999999999999988643
Q ss_pred CC----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 636 TA----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 ~~----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.. ++..|+|||.+....++.++|||||||++|||++ |+.||..... .+.......+..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i~~~~~--------- 235 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGER--------- 235 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCC---------
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHHHcCCC---------
Confidence 22 2346999999998999999999999999999997 9999964332 222222222211
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
...+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112234456788999999999999999999999999988653
No 115
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=338.91 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=186.5
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
.+++.+.+|+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 124 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EIS 124 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEE
Confidence 3477888999999999999976 57889999886432 2356889999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccC
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGla~~ 634 (772)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 125 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp EEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 99999999999999853 456899999999999999999999998 999999999999975 89999999999764
Q ss_pred CC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccc
Q 004129 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............. ..+
T Consensus 201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~i~~~~~~~---~~~--- 273 (349)
T 2w4o_A 201 VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYF---ISP--- 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-HHHHHHHHTTCCCC---CTT---
T ss_pred cCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-HHHHHHHHhCCCcc---CCc---
Confidence 32 2456799999999999999999999999999999999999644332 22233333322111 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11234567889999999999999999999986
No 116
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-37 Score=326.81 Aligned_cols=239 Identities=20% Similarity=0.354 Sum_probs=196.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||+|+.. ++..+|+|++....... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 87 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLI 87 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEE
Confidence 67888999999999999865 56789999886433221 223467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 999999999999853 356899999999999999999999988 999999999999999999999999987533
Q ss_pred ---CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004129 636 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 636 ---~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+............ +...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~~~~ 230 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFTF-----------PDFV 230 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCC-----------CTTS
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhCCCCC-----------CCcC
Confidence 23456789999999999999999999999999999999999633 3333333333322211 1223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 713 LEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
++++.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 4678899999999999999999999974
No 117
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-37 Score=332.82 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=194.4
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc--CCCcccceeEEEEcCCC--ce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV--NHKNFVNLIGYCEEDEP--FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l--~HpNIV~l~g~~~~~~~--~~ 555 (772)
+++++.+|+|+||.||+|+.. +..||||++.... ...+.+|.+++... +||||+++++++..... ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 39 IQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred eEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 478899999999999999986 8899999875322 23344555555554 99999999999987632 26
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------CCCeEeeCCCCCCeEECCCCcEEEccc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------TPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------~~~IvHrDLKp~NILld~~~~~kL~DF 629 (772)
.++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. .++|+||||||+|||++.++.+||+||
T Consensus 110 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 7999999999999999953 3589999999999999999999987 223999999999999999999999999
Q ss_pred cCccCC-------------CCCCccccchhhhccCCCCCC------CcHHHHHHHHHHHHcC----------CCcccCCC
Q 004129 630 SFWNNT-------------TAAKTGSAAMELLETSAVDLE------SNVYSFGTILFEMITG----------RISYSIEN 680 (772)
Q Consensus 630 Gla~~~-------------~~~~~~~~apE~~~~~~~s~k------sDVwSfGvvL~ELltG----------~~P~~~~~ 680 (772)
|+++.. ..++..|+|||.+.+..++.+ +|||||||++|||+|| +.||....
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~ 266 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence 987422 235667999999987777665 9999999999999999 66664221
Q ss_pred ---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 681 ---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 681 ---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
....... ..... .. ..+.... ....+++++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 267 ~~~~~~~~~~-~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 267 PSDPSYEDMR-EIVCI-KK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CSSCCHHHHH-HHHTT-SC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCCchhhhH-HHHhh-hc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1222222 21111 11 1111111 12467889999999999999999999999999999987754
No 118
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6e-38 Score=336.91 Aligned_cols=252 Identities=21% Similarity=0.391 Sum_probs=196.3
Q ss_pred cccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc--
Q 004129 481 NIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF-- 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~-- 554 (772)
.+.+.+|+|+||+||+|+.. .+..||+|.+...... ....+.+.+|++++++++||||+++++++...+..
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS---QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred eeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc---hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 67788999999999999864 3457999988654322 33456799999999999999999999999875422
Q ss_pred -eEEEEEecCCCCChhhhhhhh----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccc
Q 004129 555 -TRMMVFEYSPNGSLFEHLHIQ----EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDF 629 (772)
Q Consensus 555 -~~~LV~Ey~~~GsL~~~L~~~----~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DF 629 (772)
..++||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECTTSCEEECSC
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEEeec
Confidence 359999999999999998532 3356999999999999999999999988 999999999999999999999999
Q ss_pred cCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCC
Q 004129 630 SFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 630 Gla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+.......+...
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~- 268 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRL- 268 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC-
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHHcCCCC-
Confidence 99864321 2346899999999999999999999999999999 8889864332 2222223322111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+..++.++.+++.+||+.||++||++.++++.|+++....+
T Consensus 269 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 269 ---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1223445678999999999999999999999999999877554
No 119
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=330.89 Aligned_cols=247 Identities=18% Similarity=0.291 Sum_probs=201.1
Q ss_pred cccc-cccccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fg~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++ .+|+|+||.||+|+.. .+..||||++.... .....+++.+|++++++++||||+++++++..+ ..
T Consensus 12 ~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 84 (287)
T 1u59_A 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---AL 84 (287)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SE
T ss_pred hhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc----chhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC---Cc
Confidence 4555 8999999999999853 57789999886532 133456799999999999999999999999543 46
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 999999999999999853 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+.......+...
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~~~------- 232 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRM------- 232 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCCC-------
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCCcC-------
Confidence 1 2346899999988889999999999999999999 999996433 23333333332111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1223445788999999999999999999999999999866543
No 120
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=355.28 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=195.7
Q ss_pred hhccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 476 CEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
.++| ++++.+|+|+||+||+|+.. +++.||+|++....... ....+.+.+|.+++.+++|||||++++++.+.+
T Consensus 60 ~~~f-~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-- 134 (412)
T 2vd5_A 60 RDDF-EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--RGEVSCFREERDVLVNGDRRWITQLHFAFQDEN-- 134 (412)
T ss_dssp GGGE-EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--HGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--
T ss_pred hhhE-EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--
Confidence 3444 77888999999999999975 68999999986432211 122345889999999999999999999999877
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhhee
Confidence 789999999999999999632 346899999999999999999999988 99999999999999999999999999853
Q ss_pred C----------CCCCccccchhhhc-------cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004129 635 T----------TAAKTGSAAMELLE-------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 635 ~----------~~~~~~~~apE~~~-------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
. ..++..|+|||.+. ...|+.++|||||||++|||+||+.||... +..+....+.......
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAETYGKIVHYKEHL 289 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHC
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccCc
Confidence 2 24567899999986 457899999999999999999999999643 3333333333211000
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 004129 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR---PSMRGIAAK 740 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R---Ps~~evl~~ 740 (772)
..+......+.++.+++.+||. +|++| |+++|+++.
T Consensus 290 ------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 ------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0011112345788999999999 99998 589998753
No 121
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-37 Score=350.43 Aligned_cols=240 Identities=20% Similarity=0.345 Sum_probs=198.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||.||+|+.. +|+.||||++....... ....+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~l 93 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFM 93 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEE
Confidence 367788999999999999975 78999999986543211 223467899999999999999999999998876 6899
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 94 v~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 94 VMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999985 3456999999999999999999999988 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..+ +.++||||+||++|||++|+.||... +.......+..+.... +
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~-----------p 236 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--HVPTLFKKICDGIFYT-----------P 236 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--SSHHHHHHHHTTCCCC-----------C
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCcCC-----------C
Confidence 34567999999987765 68999999999999999999999643 3344444444332211 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 2234678899999999999999999999873
No 122
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=337.65 Aligned_cols=246 Identities=20% Similarity=0.323 Sum_probs=197.4
Q ss_pred cccccccccceEEEEEEEEcC-----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS-----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~-----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|+|+||+||+|+... +..||||.+.... .......|.+|++++++++||||+++++++...+ .
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 120 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--P 120 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--S
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--C
Confidence 456788999999999998653 2358898876432 2334567999999999999999999999998766 6
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 121 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred cEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 7999999999999999863 3456899999999999999999999998 999999999999999999999999998643
Q ss_pred CC------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004129 636 TA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 636 ~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~------ 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFRL------ 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCC------
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCcC------
Confidence 21 1235999999998999999999999999999999 99999532 333333333332111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 270 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 ----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp ----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11123456788999999999999999999999999987654
No 123
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.6e-38 Score=340.13 Aligned_cols=248 Identities=19% Similarity=0.305 Sum_probs=198.6
Q ss_pred cccccccccceEEEEEEEEcC------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCC
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~ 553 (772)
++.+.+|+|+||+||+|+... ...||+|.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH----ADEKEALMSELKIMSHLGQHENIVNLLGACTHGG- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC----hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-
Confidence 677889999999999999643 24789988764321 23456799999999999 8999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhhc------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQE------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.+
T Consensus 124 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 -PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNG 200 (333)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEGG
T ss_pred -ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECCC
Confidence 5699999999999999986432 245799999999999999999999988 9999999999999999
Q ss_pred CcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHH
Q 004129 622 YAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASE 689 (772)
Q Consensus 622 ~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~ 689 (772)
+.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFYK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHHH
Confidence 9999999999864321 1236999999998999999999999999999999 999996443322 1122
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
......... .+...+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 279 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDGYQMA---------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCC---------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 222211100 1122346788999999999999999999999999987653
No 124
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.6e-37 Score=357.84 Aligned_cols=242 Identities=19% Similarity=0.242 Sum_probs=199.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ......+.+|+++|.+++|||||++++++.+.+ ..++|
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 262 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLV 262 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEE
Confidence 67788999999999999975 68999999986543221 222456889999999999999999999998877 78999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999987544556999999999999999999999998 999999999999999999999999998643
Q ss_pred ----CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ----TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ----~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+........... ++
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~-----------~p 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE-----------YS 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC-----------CC
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc-----------CC
Confidence 2346679999999988999999999999999999999999975432 223333333322111 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRP-----SMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~ 739 (772)
...+.++.+|+.+||+.||++|| ++.||++
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 33456789999999999999999 7888875
No 125
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-37 Score=327.09 Aligned_cols=238 Identities=22% Similarity=0.340 Sum_probs=179.5
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+. .+++.||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 90 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIM 90 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEE
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEE
Confidence 36788999999999999985 468899999986543222 223467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+ +|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 91 v~e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEECC-CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred Eehhc-CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 99999 7788888753 356899999999999999999999998 9999999999999999999999999886432
Q ss_pred ------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 ------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..+ +.++|||||||++|||+||+.||... ...........+.... +
T Consensus 166 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~-----------~ 232 (275)
T 2eue_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVYTL-----------P 232 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCC-----------C
T ss_pred ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCC-----------C
Confidence 24567999999987765 78999999999999999999999643 3444444444332221 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 223467889999999999999999999975
No 126
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-38 Score=334.79 Aligned_cols=245 Identities=25% Similarity=0.423 Sum_probs=197.1
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++++.+|+|+||+||+|+.. +..+|||.+.... ..+.|.+|++++++++||||+++++++.+.+. ..++||
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~ 94 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 94 (278)
T ss_dssp EEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred eEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEE
Confidence 67888999999999999875 7889999876432 24579999999999999999999999765432 468999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 172 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeecccccccccccc
Confidence 9999999999997554445899999999999999999999988 9999999999999999999999999876432
Q ss_pred --CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHH
Q 004129 637 --AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVL 713 (772)
Q Consensus 637 --~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 713 (772)
.++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..+.......+.. ...+...+
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~~~~~----------~~~~~~~~ 240 (278)
T 1byg_A 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGYK----------MDAPDGCP 240 (278)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHTTTCC----------CCCCTTCC
T ss_pred CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCC----------CCCcccCC
Confidence 23457999999998999999999999999999999 999996432 2222222222211 11123345
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 714 EELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 714 ~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.++.+++.+||+.||++||++.|+++.|+++....
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 67889999999999999999999999999987643
No 127
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=343.19 Aligned_cols=258 Identities=13% Similarity=0.111 Sum_probs=192.2
Q ss_pred ccccccccccceEEEEEEEEc----CCcEEEEEEeeecccchhh------hhHHHHHHHHHHHHhccCCCcccceeEEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS----SGVEIAVTSTSVKSRADWS------KNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~----~~~~vaVK~~~~~~~~~~~------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
+++.+.+|+|+||+||+|+.. .+..+|+|+.......... ......+.+|+..+..++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 467889999999999999975 5678999988654321110 011234778999999999999999999988
Q ss_pred cC--CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC--cEE
Q 004129 550 ED--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY--AAK 625 (772)
Q Consensus 550 ~~--~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~--~~k 625 (772)
.. +....++||||+ +|+|.+++... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSSTTSEE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCCCCcEE
Confidence 72 122689999999 99999998643 37999999999999999999999998 99999999999998877 999
Q ss_pred EccccCccCC----------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHH-
Q 004129 626 ISDFSFWNNT----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWAS- 688 (772)
Q Consensus 626 L~DFGla~~~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~- 688 (772)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||.....+......
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999998532 23556899999999999999999999999999999999999643333222211
Q ss_pred -HHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 689 -EYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 689 -~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
...... .......... ....+.++.+++.+||+.||++||++.+|++.|+++..
T Consensus 274 ~~~~~~~--~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLLDE--LPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHT--TTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhccc--ccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111110 1100000000 01345689999999999999999999999999988654
No 128
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.7e-38 Score=332.02 Aligned_cols=245 Identities=21% Similarity=0.349 Sum_probs=202.2
Q ss_pred cccccccccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||+|+... +..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 16 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 87 (288)
T 3kfa_A 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 87 (288)
T ss_dssp EEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEE
Confidence 677889999999999999764 7889999886432 23467999999999999999999999998776 57999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC-
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA- 638 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~~- 638 (772)
|||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999997655667999999999999999999999988 999999999999999999999999998654322
Q ss_pred ---------CccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 639 ---------KTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 639 ---------~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
+..|+|||.+.+..++.++||||||+++|||++ |+.||..... ............. ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~~~----------~~ 233 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRM----------ER 233 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC----------CC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccCCC----------CC
Confidence 235899999998999999999999999999999 9999964332 2222222211110 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
+..+++++.+++.+||+.||++||++.|+++.|+++...
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999887653
No 129
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.7e-37 Score=332.34 Aligned_cols=246 Identities=17% Similarity=0.254 Sum_probs=199.5
Q ss_pred cccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
.+++.+.+|+|+||.||+|+.. ++..+|+|.+........ .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 90 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DV 90 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EE
Confidence 3578889999999999999975 688999999876543221 1112467999999999999999999999998876 67
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCc
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFW 632 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kL~DFGla 632 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999853 456899999999999999999999988 99999999999999887 7999999987
Q ss_pred cCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 633 NNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 633 ~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
+... .++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+............. +
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~----~- 239 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVSYDFD----E- 239 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCC----H-
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcccccC----h-
Confidence 6432 2456799999999999999999999999999999999999643 33344443333221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 240 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 240 --EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111233467889999999999999999999986
No 130
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.3e-37 Score=330.11 Aligned_cols=252 Identities=16% Similarity=0.211 Sum_probs=197.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 111 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYV 111 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc--CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEE
Confidence 367888999999999999975 6788999988644322 2334578999999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999864 346899999999999999999999998 9999999999999999999999999875432
Q ss_pred --------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||.... ............+.. ...
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~-------~~~ 257 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---LSVMGAHINQAIPRP-------STV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---HHHHHHHHHSCCCCG-------GGT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HHHHHHHhccCCCCc-------ccc
Confidence 24557899999998999999999999999999999999996432 222223333222111 112
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhhhcCC
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEITAMEP 749 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 749 (772)
....+.++.+++.+||+.||++|| +++++++.|+.......
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 233456788999999999999999 99999999998765443
No 131
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.1e-38 Score=333.86 Aligned_cols=264 Identities=14% Similarity=0.197 Sum_probs=202.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+. .+++.||||+...... ..++.+|++++.+++|++++..++++...+. ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~l 82 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 82 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-------chHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEE
Confidence 47788899999999999996 5788999998654332 1357889999999999998888887754432 5799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~~ 635 (772)
||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99999 9999999863 3456999999999999999999999998 9999999999999 78899999999987532
Q ss_pred ----------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCCc
Q 004129 636 ----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLK 698 (772)
Q Consensus 636 ----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~~ 698 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 235 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--- 235 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH---
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc---
Confidence 13456789999999999999999999999999999999999743211 1111111110000
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004129 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
...........++++.+++.+||+.||++||++.++++.|+++...... +...+..|+.+
T Consensus 236 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 4hgt_A 236 ---STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp ---HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC---CTTCCCGGGGC
T ss_pred ---cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC---CccCccchhhc
Confidence 0000011122356889999999999999999999999999998775432 23446667654
No 132
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-37 Score=327.18 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=199.3
Q ss_pred cccccccccceEEEEEEEEcC-C---cEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS-G---VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~-~---~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.+ + ..+|+|.+.... .....+.|.+|++++++++||||+++++++.+.+. ..
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 98 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT----EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LP 98 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc----cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-Cc
Confidence 345778999999999998543 2 268888775322 12345689999999999999999999999986653 34
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 99 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 899999999999999863 3456899999999999999999999998 9999999999999999999999999986321
Q ss_pred -------------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 -------------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 -------------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.++..|+|||.+.+..++.++|||||||++|||+||..|+.... +..+.......+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~------- 247 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRL------- 247 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCC-------
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCC-------
Confidence 12346899999999999999999999999999999666653222 222222222222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCC
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGAT 753 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 753 (772)
..+...++++.+++.+||+.||++|||+.|+++.|+++.........
T Consensus 248 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 248 ---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred ---CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 11223346788999999999999999999999999999887655443
No 133
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-37 Score=331.24 Aligned_cols=260 Identities=15% Similarity=0.212 Sum_probs=203.6
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+. .+++.||||++...... +++.+|++++.+++|++++..++++...+. ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~l 82 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVM 82 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-------CHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEE
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-------hHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEE
Confidence 36788899999999999996 67889999987654321 358899999999999998888877754432 5799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~~ 635 (772)
||||+ +|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999 9999999863 3456999999999999999999999998 9999999999999 48899999999987532
Q ss_pred ----------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC----CHH-HHHHHHhhcC
Q 004129 636 ----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG----SLE-NWASEYLKGE 694 (772)
Q Consensus 636 ----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~----~~~-~~~~~~~~~~ 694 (772)
..++..|+|||.+.+..++.++|||||||++|||+||+.||..... ... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST- 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-
Confidence 2345578999999999999999999999999999999999974221 111 111111110
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHH
Q 004129 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAEL 764 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~ 764 (772)
+ .......+++++.+++.+||+.||++||++.+|++.|+++...... +...+..|..+
T Consensus 238 -~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~---~~~~~~dw~~~ 295 (296)
T 3uzp_A 238 -P--------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF---SYDYVFDWNML 295 (296)
T ss_dssp -C--------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC---CSSCCCGGGGC
T ss_pred -c--------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC---ccccccccccc
Confidence 0 0011123456789999999999999999999999999998776543 23446777654
No 134
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=335.68 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=190.2
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHH--HHHHHhccCCCcccceeEEEEc---CCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRK--KIDTLSKVNHKNFVNLIGYCEE---DEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~--Ei~~L~~l~HpNIV~l~g~~~~---~~~~~ 555 (772)
++++.+|+|+||+||+|+. +++.||||++.... ...+.. |+..+..++||||+++++++.. .+...
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred heeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 6788999999999999987 57899999886432 123333 4444556899999999986643 22224
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-------TPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-------~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
.++||||+++|+|.+++.. ...++..+..|+.|++.||+|||+. .++|+||||||+|||++.++.+||+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 6899999999999999853 3358999999999999999999998 11399999999999999999999999
Q ss_pred ccCccCCC-----------------CCCccccchhhhcc-------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCC---
Q 004129 629 FSFWNNTT-----------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMITGRISYSIENG--- 681 (772)
Q Consensus 629 FGla~~~~-----------------~~~~~~~apE~~~~-------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--- 681 (772)
||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99985322 25568999999876 4566789999999999999999877643211
Q ss_pred -------------CHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 682 -------------SLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 682 -------------~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
....+ ........ ....+... .......+.++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDM-QVLVSREK-QRPKFPEA-WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCTTHHHHCSSCCHHHH-HHHHTTSC-CCCCCCTT-CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHhhhcccCCCchHHHH-Hhhhcccc-cCCCCCcc-cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 01111 11111111 00011111 1112346778999999999999999999999999999998765
Q ss_pred CCC
Q 004129 749 PDG 751 (772)
Q Consensus 749 ~~~ 751 (772)
...
T Consensus 321 ~~~ 323 (336)
T 3g2f_A 321 ERN 323 (336)
T ss_dssp CC-
T ss_pred Hhc
Confidence 543
No 135
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.1e-38 Score=367.29 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=197.2
Q ss_pred ccccccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 484 GSFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+.+|+|+||+||+|.+. .++.||||+++.... .....++|.+|+++|++++|||||++++++..+ ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG---CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEE
Confidence 36899999999999753 457899998865432 123356899999999999999999999999754 368999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
|||++|+|.+++. ....+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 449 E~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 449 EMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp ECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred EccCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 9999999999995 3456899999999999999999999998 99999999999999999999999998763321
Q ss_pred ---------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 638 ---------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 638 ---------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
++..|+|||.+....++.++|||||||++|||+| |+.||... ...+.......+... .
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~----------~ 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM----------G 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC----------C
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCC----------C
Confidence 1245999999999999999999999999999999 99999643 333333333333211 1
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
.+..++.++.++|.+||+.||++||++.+|++.|+++..
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 223455789999999999999999999999999998654
No 136
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.5e-37 Score=327.19 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=195.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC--CCceE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
+++...+|+|+||+||+|... ++..||+|.+..... .....+.+.+|++++++++||||+++++++... +....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 366778999999999999864 677899988765432 233457899999999999999999999998653 22357
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNT 635 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL~DFGla~~~ 635 (772)
++||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+++|+||||||+|||++ +++.+||+|||++...
T Consensus 105 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999999853 3568999999999999999999999877799999999999997 7899999999988533
Q ss_pred C-------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 636 T-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ~-------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
. .++..|+|||.+. +.++.++||||+||++|||+||+.||... ............+..+. ..
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~---------~~ 251 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPA---------SF 251 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCCG---------GG
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc-CcHHHHHHHHhccCCcc---------cc
Confidence 2 2456799999876 46999999999999999999999999643 23333333333321111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2223457889999999999999999999986
No 137
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.1e-37 Score=327.81 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=196.4
Q ss_pred cccccccccceEEEEEEEEcCC----cEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSG----VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~----~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+.... ..+++|.+.... .....+.+.+|++++++++||||+++++++...+. ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~ 102 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SP 102 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CC
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC----CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ce
Confidence 6778899999999999986432 347777765322 12345679999999999999999999999765443 46
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 103 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECccccccccc
Confidence 899999999999999963 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred C-------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004129 637 A-------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 637 ~-------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |..||..... .+.......+....
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~----- 252 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRLL----- 252 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTTCCCC-----
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcCCCCC-----
Confidence 1 2235899999999999999999999999999999 4555543222 12222222221111
Q ss_pred CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 703 PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 703 ~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
.+..++.++.+++.+||+.||++||++.|+++.|+++......
T Consensus 253 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1122346788999999999999999999999999998876544
No 138
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.3e-37 Score=338.72 Aligned_cols=240 Identities=19% Similarity=0.248 Sum_probs=191.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+++.. +++.||||++...... .+.+.+|+.++++++|||||++++++...+ ..++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 93 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI------DENVQREIINHRSLRHPNIVRFKEVILTPT--HLAI 93 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS------CHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEE
Confidence 478889999999999999975 7889999988643321 246889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--EEEccccCccCC-
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFSFWNNT- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--~kL~DFGla~~~- 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 94 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 94 IMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999999999853 346899999999999999999999988 999999999999987765 999999988632
Q ss_pred -------CCCCccccchhhhccCCCCCC-CcHHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcCCCCccccCCcc
Q 004129 636 -------TAAKTGSAAMELLETSAVDLE-SNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~s~k-sDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
..++..|+|||.+.+..++.+ +|||||||++|||+||+.||.... ...................
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 243 (361)
T 3uc3_A 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD------ 243 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT------
T ss_pred ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC------
Confidence 235668999999988887655 899999999999999999997432 2334444444333221111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01234678899999999999999999999864
No 139
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.2e-37 Score=338.11 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=193.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-----CCcccceeEEEEcCCC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----HKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----HpNIV~l~g~~~~~~~ 553 (772)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+..|++++.+++ |||||++++++...+
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~- 109 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD- 109 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT-
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC-
Confidence 47889999999999999997 46788999988532 223456788999999986 999999999999877
Q ss_pred ceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------------
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------------- 620 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~------------- 620 (772)
..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.
T Consensus 110 -~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 110 -HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp -EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred -eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchhcc
Confidence 789999999 999999997655567999999999999999999999998 999999999999986
Q ss_pred ------------CCcEEEccccCccCCC------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC
Q 004129 621 ------------DYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS 682 (772)
Q Consensus 621 ------------~~~~kL~DFGla~~~~------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~ 682 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-- 263 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE-- 263 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--
T ss_pred cccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc--
Confidence 7899999999986432 34667999999999999999999999999999999999996432
Q ss_pred HHHHHHHHhhcCCCCcc-------------ccC--------Cccc--------------cccHHHHHHHHHHHHHcccCC
Q 004129 683 LENWASEYLKGEQPLKD-------------IVD--------PTLK--------------SFQENVLEELLVVIKNCVHPD 727 (772)
Q Consensus 683 ~~~~~~~~~~~~~~~~~-------------~~d--------~~l~--------------~~~~~~~~~l~~Li~~Cl~~d 727 (772)
..+..........+... .++ +... .......+.+.+|+.+||+.|
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 343 (360)
T 3llt_A 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQID 343 (360)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCC
Confidence 22222221111111100 000 0000 000011256789999999999
Q ss_pred CCCCCCHHHHHH
Q 004129 728 PKQRPSMRGIAA 739 (772)
Q Consensus 728 P~~RPs~~evl~ 739 (772)
|++|||+.|+++
T Consensus 344 P~~Rpta~elL~ 355 (360)
T 3llt_A 344 PTLRPSPAELLK 355 (360)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999875
No 140
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-37 Score=335.99 Aligned_cols=246 Identities=21% Similarity=0.332 Sum_probs=200.5
Q ss_pred cccccccccceEEEEEEEEc------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|+.. .+..||+|.+..... ......|.+|++++++++||||+++++++.+.+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 101 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 101 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC----HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC----HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--
Confidence 67788999999999999864 367899998764321 233467999999999999999999999998776
Q ss_pred eEEEEEecCCCCChhhhhhhhc--------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEE
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE--------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKI 626 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~--------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL 626 (772)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCCeEEE
Confidence 5699999999999999986432 145789999999999999999999998 999999999999999999999
Q ss_pred ccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcC
Q 004129 627 SDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGE 694 (772)
Q Consensus 627 ~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~ 694 (772)
+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||... +..+.......+.
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~ 257 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGG 257 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTTC
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcCC
Confidence 99999864321 2345899999998999999999999999999999 88898532 3334333333321
Q ss_pred CCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 695 QPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 695 ~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
. ...+..++.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 258 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 258 L----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred c----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 11123345678899999999999999999999999988644
No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=328.15 Aligned_cols=239 Identities=19% Similarity=0.314 Sum_probs=178.7
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 89 (278)
T 3cok_A 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLV 89 (278)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--hhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEE
Confidence 6778899999999999996 578899999886432211 222467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999863 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred ------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004129 637 ------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 637 ------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||...... +....... ... ..+.
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~----------~~~-~~~~ 233 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNKVVL----------ADY-EMPS 233 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CCS----------SCC-CCCT
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHHHhh----------ccc-CCcc
Confidence 2355789999998888999999999999999999999999643321 11111000 000 1123
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+.++.+++.+||+.||++||++.|+++
T Consensus 234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 34567889999999999999999999975
No 142
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-37 Score=328.52 Aligned_cols=241 Identities=17% Similarity=0.296 Sum_probs=196.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC--------
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED-------- 551 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~-------- 551 (772)
++++.+|+|+||.||+|+.. +++.||+|.+.... +.+.+|++++++++||||+++++++...
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 67788999999999999976 78999999886432 2467899999999999999999988641
Q ss_pred ------CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004129 552 ------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 552 ------~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCEE
Confidence 1124699999999999999997655677999999999999999999999988 99999999999999999999
Q ss_pred EccccCccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004129 626 ISDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 626 L~DFGla~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
|+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||..|+... ..+......+ ..
T Consensus 163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~--~~ 236 (284)
T 2a19_B 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDG--II 236 (284)
T ss_dssp ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHTT--CC
T ss_pred ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhcc--cc
Confidence 99999875432 2456789999999999999999999999999999999887421 1222222111 11
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
. ...+.++.+++.+||+.||++||++.|+++.|..+.+...
T Consensus 237 ~-----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 S-----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp C-----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred c-----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1 1233567889999999999999999999999999876544
No 143
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=330.72 Aligned_cols=251 Identities=21% Similarity=0.291 Sum_probs=193.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||+|++..... .....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED---DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLV 80 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc---chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEE
Confidence 67889999999999999975 588999998865432 2334567899999999999999999999998877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC---
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT--- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~--- 636 (772)
|||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 81 FEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 99999999988874 3456899999999999999999999998 9999999999999999999999999986432
Q ss_pred ------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHH-HHHHHHhhc-----------CCCC
Q 004129 637 ------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLE-NWASEYLKG-----------EQPL 697 (772)
Q Consensus 637 ------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-~~~~~~~~~-----------~~~~ 697 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ..+...... ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 24557899999865 6789999999999999999999999964332111 111111100 0000
Q ss_pred c--cccCCcc----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 698 K--DIVDPTL----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 698 ~--~~~d~~l----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
. ...++.. ....+..+.++.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0001100 00112345678899999999999999999999863
No 144
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.1e-37 Score=329.33 Aligned_cols=245 Identities=21% Similarity=0.324 Sum_probs=196.9
Q ss_pred cccc-cccccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fg~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+ .+|+|+||+||+|.+. .++.||||++..... .....+++.+|++++++++||||+++++++.. + ..
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~ 92 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SW 92 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--Cc
Confidence 5556 7899999999999643 457899998865422 23345689999999999999999999999943 3 46
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 899999999999999863 456899999999999999999999998 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||... ...+.......+...
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~------- 239 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERM------- 239 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCC-------
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCC-------
Confidence 1 1245899999988889999999999999999999 99999643 233333333222111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 240 ---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 12234456789999999999999999999999999987554
No 145
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5e-37 Score=329.97 Aligned_cols=242 Identities=22% Similarity=0.323 Sum_probs=190.4
Q ss_pred cccc-ccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceE
Q 004129 480 SNII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 480 ~~ii-g~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
+++. +.+|+|+||+||+|+. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~ 86 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RF 86 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EE
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EE
Confidence 3554 5689999999999995 4788999999865432 2245789999999985 7999999999999877 67
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCcc
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWN 633 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kL~DFGla~ 633 (772)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 87 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999999864 356899999999999999999999998 999999999999988766 9999999876
Q ss_pred CCC----------------CCCccccchhhhcc-----CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC----------
Q 004129 634 NTT----------------AAKTGSAAMELLET-----SAVDLESNVYSFGTILFEMITGRISYSIENGS---------- 682 (772)
Q Consensus 634 ~~~----------------~~~~~~~apE~~~~-----~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~---------- 682 (772)
... .++..|+|||.+.. ..++.++|||||||++|||+||+.||......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 321 25567999999864 56889999999999999999999999743321
Q ss_pred ---HHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 683 ---LENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 683 ---~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..........+...... ......+.++.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPD-------KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCH-------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCc-------hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11122222222111100 000123567899999999999999999999987
No 146
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.6e-37 Score=328.35 Aligned_cols=246 Identities=18% Similarity=0.331 Sum_probs=197.0
Q ss_pred cccccccccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|+... +..||+|.+.... .....+.|.+|++++++++||||+++++++.++. .
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 87 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC----TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---T 87 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS----CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS---C
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc----CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC---C
Confidence 667888999999999998643 2358888876432 1234578999999999999999999999987543 4
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 899999999999999864 3456899999999999999999999988 9999999999999999999999999876432
Q ss_pred C----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 637 A----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ~----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +.......+...
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~--------- 233 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRL--------- 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCC---------
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCC---------
Confidence 1 2346999999998999999999999999999999 99999643221 122222222111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..+++++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 234 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 234 -PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 011223467889999999999999999999999999886643
No 147
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-36 Score=321.89 Aligned_cols=243 Identities=19% Similarity=0.279 Sum_probs=197.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|... ++..+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~ 82 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 82 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEE
Confidence 377888999999999999965 5789999988754322 334567899999999999999999999998776 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 83 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999999988853 356899999999999999999999998 999999999999986655 999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...........+..... .+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~---~~~--- 230 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYP---SPE--- 230 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC---TTT---
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCC---chh---
Confidence 23456789999999999999999999999999999999999543 33344444333322111 111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++++.+++.+||+.||++|||+.|+++.
T Consensus 231 -~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 -WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 12234678899999999999999999999873
No 148
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=336.70 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=198.3
Q ss_pred ccccccccccceEEEEEEEE-----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~ 554 (772)
+++++.+|+|+||.||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+..
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 37788999999999999984 367899999886432 23356799999999999999999999998765433
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 56899999999999999864 3356899999999999999999999988 99999999999999999999999998764
Q ss_pred CCC------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHH-------------HHHHH
Q 004129 635 TTA------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE-------------NWASE 689 (772)
Q Consensus 635 ~~~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~-------------~~~~~ 689 (772)
... ++..|+|||.+.+..++.++|||||||++|||+||+.|+........ .....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 321 23358999999888899999999999999999999998852110000 00111
Q ss_pred HhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 690 YLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 690 ~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
.+.... ....+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 275 ~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111110 0112234557889999999999999999999999999998653
No 149
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.7e-37 Score=331.63 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=201.0
Q ss_pred ccccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~ 552 (772)
+++.+.+|+|+||+||+|+. .+++.||||.+..... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC----cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 37788999999999999984 3457899998864321 23446799999999999 7999999999998754
Q ss_pred CceEEEEEecCCCCChhhhhhhhcc--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQEA--------------EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL 618 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl 618 (772)
. ..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||++
T Consensus 105 ~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 G-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL 181 (316)
T ss_dssp S-CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred C-ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEE
Confidence 3 36999999999999999964322 12889999999999999999999988 9999999999999
Q ss_pred CCCCcEEEccccCccCCCC-----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHH
Q 004129 619 TEDYAAKISDFSFWNNTTA-----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENW 686 (772)
Q Consensus 619 d~~~~~kL~DFGla~~~~~-----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~ 686 (772)
+.++.+||+|||+++.... ++..|+|||.+.+..++.++|||||||++|||+| |+.||...... ...
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~ 260 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEF 260 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHH
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHH
Confidence 9999999999999864422 1235899999999999999999999999999999 99999654332 222
Q ss_pred HHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 687 ASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 687 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
......+... ..+...+.++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 261 ~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 261 CRRLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhccCccC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 2222222111 011223467889999999999999999999999999987643
No 150
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.7e-37 Score=335.84 Aligned_cols=249 Identities=25% Similarity=0.439 Sum_probs=198.9
Q ss_pred cccccccccceEEEEEEEEc-CCcEE--EEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEI--AVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~v--aVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||.||+|+.. ++..+ ++|.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~ 101 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 101 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EE
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ce
Confidence 67788999999999999964 45544 777765322 122345789999999999 9999999999998877 67
Q ss_pred EEEEecCCCCChhhhhhhhc--------------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQE--------------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY 622 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~--------------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~ 622 (772)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCCC
Confidence 99999999999999986432 246899999999999999999999988 99999999999999999
Q ss_pred cEEEccccCccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004129 623 AAKISDFSFWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 623 ~~kL~DFGla~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~ 257 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQG 257 (327)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHGGGT
T ss_pred eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHHHhhcC
Confidence 99999999876322 23446899999988889999999999999999998 99999533 333333333222
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
... ..+...+.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 258 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCC----------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 110 1122344678899999999999999999999999999876543
No 151
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=334.65 Aligned_cols=240 Identities=22% Similarity=0.304 Sum_probs=192.0
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCC--CcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH--KNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H--pNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|...++..||||++...... ....+.+.+|++++.+++| |||+++++++...+ ..+
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 85 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 85 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc---hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEE
Confidence 4788999999999999999988999999998754322 3345679999999999976 99999999999877 789
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
+|||| .+|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 86 lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99995 58899999863 456899999999999999999999998 99999999999997 578999999998643
Q ss_pred ---------CCCCccccchhhhcc-----------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004129 636 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 ---------~~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||........ ..........
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 238 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHAIIDPNH 238 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHHCTTS
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-HHHHHhcCCc
Confidence 235668999999854 6789999999999999999999999964333222 2222222111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~---------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 239 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 10 1112223578899999999999999999999865
No 152
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.6e-37 Score=321.81 Aligned_cols=239 Identities=18% Similarity=0.249 Sum_probs=194.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. ++..+|+|++...... ..+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYL 83 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEE
Confidence 477888999999999999975 4678999988654322 2457899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 84 VMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999998854 355899999999999999999999998 9999999999999 78899999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+ .++.++||||||+++|||+||+.||... ...+.......+.......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~------- 229 (277)
T 3f3z_A 160 KPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPEK------- 229 (277)
T ss_dssp CTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHH-------
T ss_pred cCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCch-------
Confidence 234567899998865 4899999999999999999999999643 3334444444332221100
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00123567889999999999999999999975
No 153
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=330.51 Aligned_cols=236 Identities=22% Similarity=0.272 Sum_probs=187.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.||||++...... .....++..|+..+.++ +|||||+++++|.+.+ ..+
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~ 133 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILY 133 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEE
Confidence 367889999999999999976 7899999987543322 22334556666666665 9999999999999877 789
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
+||||+ +|+|.+++... ...++|..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999999 77999888643 456999999999999999999999988 999999999999999999999999987543
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+ .++.++|||||||++|||++|..|+... ..+ .....+. .. ..+.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~-~~~~~~~------~~---~~~~ 274 (311)
T 3p1a_A 210 AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGW-QQLRQGY------LP---PEFT 274 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHH-HHHTTTC------CC---HHHH
T ss_pred CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHH-HHHhccC------CC---cccc
Confidence 234668999998875 7999999999999999999997766321 111 1111111 00 1122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...++++.+++.+||+.||++|||+.|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 334578899999999999999999999986
No 154
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=336.14 Aligned_cols=249 Identities=18% Similarity=0.292 Sum_probs=186.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcC------C
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEED------E 552 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~------~ 552 (772)
++.+.+|+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+++ ||||+++++++... .
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 67889999999999999964 68899999885432 233467899999999996 99999999998531 2
Q ss_pred CceEEEEEecCCCCChhhhhhhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQ-EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~-~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGl 631 (772)
....++||||+. |+|.+++... ....+++..+..|+.|++.||+|||+.+++|+||||||+|||++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 224799999995 7999988643 34569999999999999999999999887899999999999999999999999999
Q ss_pred ccCCCC---------------------CCccccchhhh---ccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHH
Q 004129 632 WNNTTA---------------------AKTGSAAMELL---ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWA 687 (772)
Q Consensus 632 a~~~~~---------------------~~~~~~apE~~---~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~ 687 (772)
++.... ++..|+|||.+ ....++.++|||||||++|||+||+.||..... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~ 262 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRIV 262 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHhh
Confidence 865322 45568999998 566788999999999999999999999953221 1111
Q ss_pred HHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 688 SEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 688 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
.+..... ........+.+++.+||+.||++||++.|+++.|+.+.+....
T Consensus 263 ----~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 263 ----NGKYSIP---------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp -------CCCC---------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ----cCcccCC---------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 1100000 0111224577899999999999999999999999999876543
No 155
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.2e-37 Score=352.65 Aligned_cols=237 Identities=19% Similarity=0.237 Sum_probs=196.0
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||+|++....... ......+.+|++++.+++|||||++++++...+ ..++|
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lV 263 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLV 263 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEE
Confidence 56778999999999999975 68999999986543221 122457889999999999999999999998876 68999
Q ss_pred EecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 560 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999986432 446999999999999999999999998 999999999999999999999999998532
Q ss_pred -------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCccccCCccc
Q 004129 636 -------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
..++..|+|||.+.+..|+.++|||||||++|||+||+.||..... ...++..........
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~---------- 411 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT---------- 411 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC----------
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC----------
Confidence 2456689999999999999999999999999999999999975432 334444444443221
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++...+.++.+++.+||+.||++||++
T Consensus 412 -~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 -YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 223345678899999999999999975
No 156
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.7e-37 Score=323.01 Aligned_cols=253 Identities=18% Similarity=0.254 Sum_probs=202.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh-hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW-SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~-~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+.. +++.+|+|.+........ .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 467888999999999999976 688999998876543221 1112467999999999999999999999998876 679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC----cEEEccccCcc
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY----AAKISDFSFWN 633 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~----~~kL~DFGla~ 633 (772)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 85 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999853 356899999999999999999999988 99999999999998877 89999999886
Q ss_pred CCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 634 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .++..|+|||.+....++.++||||||+++|||+||+.||... ...+.............
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~------- 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--TKQETLTNISAVNYDFD------- 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCCC-------
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--chHHHHHHhHhcccCCc-------
Confidence 432 2456799999999899999999999999999999999999643 23333333332211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhhhc
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA--KLKEITAM 747 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~--~L~~i~~~ 747 (772)
.......+.++.+++.+||+.||++||++.|+++ .++.+...
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0111233567889999999999999999999997 35555443
No 157
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-37 Score=328.30 Aligned_cols=248 Identities=18% Similarity=0.257 Sum_probs=198.0
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.+++|.+...... ....+.+.+|++++++++||||+++++++.+......++|
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred eeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 67888999999999999975 6888999988754322 3345679999999999999999999998865433368999
Q ss_pred EecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCC---CCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 560 FEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLT---PPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~---~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
|||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999999986432 345999999999999999999999865 3499999999999999999999999998764
Q ss_pred CC---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 635 TT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. .++..|+|||.+.+..++.++||||||+++|||+||+.||... +..+.......+..+
T Consensus 166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~--------- 234 (279)
T 2w5a_A 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR--------- 234 (279)
T ss_dssp C---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC---------
T ss_pred eccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccc---------
Confidence 32 2355799999999889999999999999999999999999643 233333333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKE 743 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~ 743 (772)
..+...+.++.+++.+||+.||++||++.||++.+..
T Consensus 235 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 -RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1122345678899999999999999999999975443
No 158
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.5e-37 Score=325.27 Aligned_cols=241 Identities=19% Similarity=0.285 Sum_probs=193.1
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||+||+|+.. ++..+|+|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 97 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYI 97 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEE
Confidence 367888999999999999964 6788999988654321 22467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCcc
Q 004129 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~ 633 (772)
||||+++|+|.+++... ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999998643 3467999999999999999999999988 9999999999999 456889999999986
Q ss_pred CCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 634 NTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .++..|+|||.+. ..++.++|||||||++|||+||+.||... ...+...............
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~----- 247 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVE----- 247 (285)
T ss_dssp C----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCC------
T ss_pred ecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccccc-----
Confidence 432 3456799999875 56899999999999999999999999643 3333333333322211110
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+++.+++.+||+.||++|||+.|+++
T Consensus 248 ---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0113457889999999999999999999985
No 159
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-37 Score=328.48 Aligned_cols=237 Identities=16% Similarity=0.256 Sum_probs=190.9
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||+|.+...... .....++.+|+..+.++ +||||+++++++.+.+ ..++
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~l 88 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLI 88 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEE
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEE
Confidence 67889999999999999975 7899999988754322 22356788999999999 9999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC----------------
Q 004129 559 VFEYSPNGSLFEHLHIQE--AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---------------- 620 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~--~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---------------- 620 (772)
||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC-----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999996542 266899999999999999999999998 999999999999984
Q ss_pred ---CCcEEEccccCccCCC-----CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh
Q 004129 621 ---DYAAKISDFSFWNNTT-----AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691 (772)
Q Consensus 621 ---~~~~kL~DFGla~~~~-----~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~ 691 (772)
...+||+|||++.... .++..|+|||.+.+. .++.++|||||||++|||++|+.++... . . .....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~--~-~~~~~ 241 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--D--Q-WHEIR 241 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--H--H-HHHHH
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--h--H-HHHHH
Confidence 4479999999876432 356679999998765 5668999999999999999998776322 1 1 11122
Q ss_pred hcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 692 KGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 692 ~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+.. ...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 242 QGRL----------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp TTCC----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCC----------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 2111 1122234567889999999999999999999986
No 160
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.1e-37 Score=325.48 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=197.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||.||+|+.. +++.+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~l 92 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC--HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEE
Confidence 367788999999999999976 56788999876543222 334567999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999998753 356899999999999999999999998 9999999999999999999999999875432
Q ss_pred -------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||... ...+............ +
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~ 235 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYSI-----------P 235 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCC-----------C
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhhccCCC-----------c
Confidence 2455689999999888999999999999999999999999543 3333333333322111 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2234578899999999999999999999874
No 161
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.1e-37 Score=342.60 Aligned_cols=238 Identities=18% Similarity=0.298 Sum_probs=185.3
Q ss_pred ccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc-cCCCcccceeEEEEc--CCCceEEEE
Q 004129 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK-VNHKNFVNLIGYCEE--DEPFTRMMV 559 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~-l~HpNIV~l~g~~~~--~~~~~~~LV 559 (772)
+.+|.|+||+||+|+.. +++.||||++... ..+.+|++++.+ .+|||||++++++.. .+....++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 57899999999999965 6788999987521 246788888754 489999999998865 222257999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccCCC
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNTT 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGla~~~~ 636 (772)
|||+++|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999997544557999999999999999999999988 999999999999997 7899999999986432
Q ss_pred --------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH--HHHHHHHhhcCCCCccccCCccc
Q 004129 637 --------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL--ENWASEYLKGEQPLKDIVDPTLK 706 (772)
Q Consensus 637 --------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~ 706 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||....... .........+..... .+.
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~---~~~-- 290 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---NPE-- 290 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC---TTT--
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC---Ccc--
Confidence 23567999999999999999999999999999999999996433210 011122222211111 111
Q ss_pred cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 707 SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 707 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...++.++.+|+.+||+.||++|||+.|+++.
T Consensus 291 --~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 --WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12345678899999999999999999999875
No 162
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-37 Score=344.68 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=185.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|.. .+++.||||++...... ....+++.+|+.++.++. |||||++++++...+....+
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN---STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 47889999999999999986 46889999988543211 233467889999999997 99999999999865544679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~- 636 (772)
+|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 88 lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 9999997 689888853 46899999999999999999999998 9999999999999999999999999986431
Q ss_pred -----------------------------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHH
Q 004129 637 -----------------------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENW 686 (772)
Q Consensus 637 -----------------------------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~ 686 (772)
.++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~ 239 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS--TMNQ 239 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--HHHH
Confidence 34567899999876 679999999999999999999999996432 2222
Q ss_pred HHHHhhc-CCCCcccc----CC------------------cccccc-------------HHHHHHHHHHHHHcccCCCCC
Q 004129 687 ASEYLKG-EQPLKDIV----DP------------------TLKSFQ-------------ENVLEELLVVIKNCVHPDPKQ 730 (772)
Q Consensus 687 ~~~~~~~-~~~~~~~~----d~------------------~l~~~~-------------~~~~~~l~~Li~~Cl~~dP~~ 730 (772)
...+... ..+..+.+ .+ ...... ....+++.+|+.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 2222210 00100000 00 000000 023467899999999999999
Q ss_pred CCCHHHHHHH
Q 004129 731 RPSMRGIAAK 740 (772)
Q Consensus 731 RPs~~evl~~ 740 (772)
|||+.|+++.
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999875
No 163
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.5e-37 Score=329.55 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=192.4
Q ss_pred cccccccccceEEEEEEEEc--CCc--EEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS--SGV--EIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~--~~~--~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++++.+|+|+||+||+|++. ++. .||||.+...... .....+.+.+|++++++++||||+++++++.... .
T Consensus 21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~ 95 (291)
T 1u46_A 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---M 95 (291)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---C
T ss_pred eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---c
Confidence 67889999999999999864 233 5788877643221 1234568999999999999999999999998754 5
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999998643 345899999999999999999999998 9999999999999999999999999876432
Q ss_pred C------------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 637 A------------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 637 ~------------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
. ++..|+|||.+.+..++.++||||||+++|||+| |+.||... +..+............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~------ 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERL------ 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCC------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCC------
Confidence 2 2235899999988889999999999999999999 99999533 3344444443332111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
..+..++.++.+++.+||+.||++||++.++++.|+++....
T Consensus 245 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 ---PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ---CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 112234567899999999999999999999999999876543
No 164
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.8e-37 Score=332.51 Aligned_cols=240 Identities=17% Similarity=0.269 Sum_probs=197.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+.+.+|+|+||.||+++.. +++.+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 118 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFV 118 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEE
Confidence 367788999999999999975 46788999876543222 334567999999999999999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998853 356899999999999999999999998 9999999999999999999999999976432
Q ss_pred -------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+............ +
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~-----------~ 261 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--CLKETYLRIKKNEYSI-----------P 261 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCC-----------C
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHhcCCCCC-----------C
Confidence 2455799999999889999999999999999999999999533 3333333333332221 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++.+++.+||+.||++||++.|+++.
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2234578889999999999999999999874
No 165
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.3e-37 Score=334.90 Aligned_cols=235 Identities=25% Similarity=0.384 Sum_probs=178.3
Q ss_pred ccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCceEEEEEe
Q 004129 484 GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~E 561 (772)
+.+|+|+||+||+|+.. +++.||||++... ....+.+|++++.+++ |||||++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 56899999999999975 6889999988532 1356789999999997 999999999999876 6799999
Q ss_pred cCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEEccccCccCCC--
Q 004129 562 YSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKISDFSFWNNTT-- 636 (772)
Q Consensus 562 y~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kL~DFGla~~~~-- 636 (772)
|+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 87 LLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred ccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999999863 457999999999999999999999988 99999999999997665 89999999986332
Q ss_pred -------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-----CHHHHHHHHhhcCCCCccccCCc
Q 004129 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-----SLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
.++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+.......+.....
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~------ 236 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE------ 236 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC------
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC------
Confidence 235578999999999999999999999999999999999974332 23333444333321111
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......++++.+++.+||+.||++|||+.|+++
T Consensus 237 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 -GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0111234578899999999999999999999875
No 166
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.9e-37 Score=323.08 Aligned_cols=239 Identities=18% Similarity=0.321 Sum_probs=196.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||.||+|+.. ++..+|+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 92 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLM 92 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEE
Confidence 67888999999999999975 56789999876432211 222467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998643 46899999999999999999999988 999999999999999999999999987532
Q ss_pred ---CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHH
Q 004129 636 ---TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENV 712 (772)
Q Consensus 636 ---~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 712 (772)
..++..|+|||.+.+..++.++||||||+++|||++|+.||... ...+........... ++...
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~-----------~~~~~ 235 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRRIVNVDLK-----------FPPFL 235 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCC-----------CCTTS
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--CHhHHHHHHhccccC-----------CCCcC
Confidence 23456789999999999999999999999999999999999643 333333333332211 12234
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 713 LEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 713 ~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.++.+++.+||+.||++||++.|+++.
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 4678899999999999999999999863
No 167
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.6e-37 Score=335.88 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=197.2
Q ss_pred ccccccccccceEEEEEEEE------cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL------SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~------~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~ 553 (772)
+++++.+|+|+||.||+|++ .++..||||.+.... ......++.+|+.++++++||||+++++++...+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 106 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL- 106 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc----chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC-
Confidence 37788999999999999984 356789999886332 1334567999999999999999999999998876
Q ss_pred ceEEEEEecCCCCChhhhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEE
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAK 625 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~-----~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~k 625 (772)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++. +..+|
T Consensus 107 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 -PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEE
T ss_pred -CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceEE
Confidence 45999999999999999975422 45899999999999999999999998 999999999999984 45699
Q ss_pred EccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhc
Q 004129 626 ISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKG 693 (772)
Q Consensus 626 L~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~ 693 (772)
|+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...+.......+
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcC
Confidence 9999986421 122446999999988999999999999999999999 99999533 333333333332
Q ss_pred CCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhc
Q 004129 694 EQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAM 747 (772)
Q Consensus 694 ~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~ 747 (772)
... ..+..++.++.+++.+||+.||++||++.|+++.|+.+...
T Consensus 262 ~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 GRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111 11223446788999999999999999999999999987653
No 168
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.9e-36 Score=323.91 Aligned_cols=241 Identities=17% Similarity=0.259 Sum_probs=196.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+.+++.+|+|+||+||+|+.. +++.+|+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYL 83 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEE
Confidence 367888999999999999975 688999999874321 12356889999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999999853 346899999999999999999999998 9999999999999 78899999999998754
Q ss_pred CC-------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccc
Q 004129 636 TA-------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSF 708 (772)
Q Consensus 636 ~~-------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 708 (772)
.. ++..|+|||.+.+..++.++|||||||++|||+||+.||... ...+.......+...... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~-------~~ 230 (304)
T 2jam_A 160 QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFES-------PF 230 (304)
T ss_dssp CCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCT-------TT
T ss_pred CCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCc-------cc
Confidence 33 456799999999899999999999999999999999999643 333444444433222111 11
Q ss_pred cHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 709 QENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 709 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12345678899999999999999999999863
No 169
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=336.31 Aligned_cols=249 Identities=17% Similarity=0.234 Sum_probs=190.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++...+ ..++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 77 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTL 77 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEE
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc----ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEE
Confidence 367888999999999999975 6889999988643321 11224568999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||++ |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 78 v~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEECCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred Eecccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 999997 699988863 3456899999999999999999999998 9999999999999999999999999876432
Q ss_pred -------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccccCC----
Q 004129 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVDP---- 703 (772)
Q Consensus 637 -------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~d~---- 703 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+... ..+.......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhhcc
Confidence 23567899999865 678999999999999999999999996433 22222222211 0111111000
Q ss_pred --------------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 704 --------------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 --------------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+....++.+|+.+||+.||++|||++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0001112345678899999999999999999999873
No 170
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.8e-38 Score=346.14 Aligned_cols=237 Identities=11% Similarity=0.153 Sum_probs=184.5
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHH---HHHhccCCCccccee-------EEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKI---DTLSKVNHKNFVNLI-------GYC 548 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei---~~L~~l~HpNIV~l~-------g~~ 548 (772)
+++.+.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+ +++++++|||||+++ +++
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 36778899999999999995 568999999987543222 23456799999 556666899999999 666
Q ss_pred EcCCC---------------ceEEEEEecCCCCChhhhhhhhcc-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 004129 549 EEDEP---------------FTRMMVFEYSPNGSLFEHLHIQEA-----EHLDWAMRLRIAMGMAYCLEHMHQLTPPIAH 608 (772)
Q Consensus 549 ~~~~~---------------~~~~LV~Ey~~~GsL~~~L~~~~~-----~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvH 608 (772)
...+. ...++||||+ +|+|.+++..... ..++|..+..|+.||+.||+|||+.+ |+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH 229 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVH 229 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EEC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--eec
Confidence 65431 0268999999 6899999974321 12446888899999999999999998 999
Q ss_pred eCCCCCCeEECCCCcEEEccccCccCCC------CCCccccchhhhccC-----------CCCCCCcHHHHHHHHHHHHc
Q 004129 609 RNLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSAAMELLETS-----------AVDLESNVYSFGTILFEMIT 671 (772)
Q Consensus 609 rDLKp~NILld~~~~~kL~DFGla~~~~------~~~~~~~apE~~~~~-----------~~s~ksDVwSfGvvL~ELlt 671 (772)
|||||+|||++.++.+||+|||+++... .+ ..|+|||.+.+. .++.++|||||||++|||+|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999986432 34 789999999877 89999999999999999999
Q ss_pred CCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 672 GRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 672 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
|+.||...... .....+.. .....++++.+++.+||+.||++||++.|+++
T Consensus 309 g~~Pf~~~~~~------------~~~~~~~~-----~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 309 ADLPITKDAAL------------GGSEWIFR-----SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SSCCC------------------CCSGGGGS-----SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCCcccccc------------cchhhhhh-----hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999532210 11111111 11233467889999999999999999999986
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-36 Score=329.49 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=198.0
Q ss_pred cccccc-ccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCc
Q 004129 478 DFSNII-GSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 478 ~f~~ii-g~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
+++.+. +.+|+|+||+||+|+.. +++.||+|++...... ......+.+|+.++.++ +||||+++++++...+
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~-- 102 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG---QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS-- 102 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT---EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--
Confidence 344555 77999999999999965 6889999988754322 22346789999999999 5699999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSF 631 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGl 631 (772)
..++||||+++|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 6799999999999999986555577999999999999999999999998 999999999999987 78999999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+..............
T Consensus 181 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~---- 254 (327)
T 3lm5_A 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED--NQETYLNISQVNVDYSE---- 254 (327)
T ss_dssp CEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCCCCT----
T ss_pred ccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHHHhcccccCc----
Confidence 86432 34668999999999999999999999999999999999996432 23333333222111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.++.+++.+||+.||++|||++|+++.
T Consensus 255 ---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 255 ---ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ---TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1112345678899999999999999999999863
No 172
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-36 Score=336.80 Aligned_cols=240 Identities=22% Similarity=0.293 Sum_probs=191.9
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC--CCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|....++.||||++...... ....+.+.+|+++|.+++ |||||++++++...+ ..+
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 132 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 132 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEE
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc---HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEE
Confidence 4778899999999999999888999999998754322 334568999999999996 599999999999877 689
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC--
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT-- 635 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~-- 635 (772)
+||| +.+|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++..
T Consensus 133 lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9999 568899999864 346899999999999999999999988 99999999999996 578999999998643
Q ss_pred ---------CCCCccccchhhhcc-----------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004129 636 ---------TAAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 636 ---------~~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
..++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .............
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIIDPNH 285 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHCTTS
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-HHHHHHHHhCccc
Confidence 235668999999864 4688999999999999999999999964332 2222333332211
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++||++.|+++.
T Consensus 286 ~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cC---------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 10 0111124578899999999999999999999864
No 173
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.2e-36 Score=328.54 Aligned_cols=249 Identities=21% Similarity=0.347 Sum_probs=197.9
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc--cCCCcccceeEEEEcCCC--ce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEEDEP--FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~--l~HpNIV~l~g~~~~~~~--~~ 555 (772)
+++.+.+|+|+||+||+|+.. ++.||||.+.... .+.+.+|++++.. ++||||+++++++..... ..
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG--------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred EEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh--------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 477889999999999999984 8899999875321 3467788888887 799999999999987642 15
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILld~~~~~kL~ 627 (772)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 115 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEEEC
T ss_pred eEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEEEE
Confidence 7999999999999999953 35899999999999999999999 666 9999999999999999999999
Q ss_pred cccCccCC-------------CCCCccccchhhhccCC------CCCCCcHHHHHHHHHHHHcC----------CCcccC
Q 004129 628 DFSFWNNT-------------TAAKTGSAAMELLETSA------VDLESNVYSFGTILFEMITG----------RISYSI 678 (772)
Q Consensus 628 DFGla~~~-------------~~~~~~~~apE~~~~~~------~s~ksDVwSfGvvL~ELltG----------~~P~~~ 678 (772)
|||+++.. ..++..|+|||.+.+.. ++.++|||||||++|||+|| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 99987422 13456799999987652 33689999999999999999 778754
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 679 EN---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.. .....+........ ..+.+.. ...++.+.+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 270 LVPSDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TSCSSCCHHHHHHHHTTSC------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCcCcccHHHHHHHHHHHH------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 32 23344433332221 1111111 12467788999999999999999999999999999987654
No 174
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-36 Score=319.65 Aligned_cols=239 Identities=20% Similarity=0.318 Sum_probs=194.1
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 83 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLF 83 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC----TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc----hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEE
Confidence 67888999999999999975 688999998865432 223467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 84 LEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp EECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 999999999999853 346899999999999999999999988 999999999999999999999999987532
Q ss_pred -------CCCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 -------TAAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 -------~~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+..+ +.++||||||+++|||+||+.||.........+.. ........ .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~----~----- 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL----N----- 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH-HHTTCTTS----T-----
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-hhhccccc----C-----
Confidence 224567999999877665 78999999999999999999999754443222221 11111110 0
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 11234467889999999999999999999876
No 175
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=338.84 Aligned_cols=236 Identities=18% Similarity=0.285 Sum_probs=191.5
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchh---hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~---~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||+||+|+. .+++.||||++........ .....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~ 103 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--F 103 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--E
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--E
Confidence 47888999999999999985 4678899998875432110 0112245778999999999999999999998877 6
Q ss_pred EEEEEecCCCC-ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 556 RMMVFEYSPNG-SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 556 ~~LV~Ey~~~G-sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
.++||||+.+| +|.+++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 79999999877 9999885 3456999999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 635 TT--------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.. .++..|+|||.+.+..+ +.++|||||||++|||++|+.||...... . ....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~------~~~~---- 241 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------V------EAAI---- 241 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------T------TTCC----
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------H------hhcc----
Confidence 32 24568999999987776 78999999999999999999999531110 0 0000
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 242 -~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 -HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111234678899999999999999999999874
No 176
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-36 Score=360.61 Aligned_cols=238 Identities=16% Similarity=0.227 Sum_probs=197.7
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+.. +++.||||++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..++
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~l 419 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYF 419 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEE
Confidence 77889999999999999965 57789999987532211 22345688899999988 7999999999998776 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC---
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT--- 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~--- 635 (772)
||||+++|+|.++++. ...+++..+..|+.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+++..
T Consensus 420 V~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999864 356999999999999999999999998 999999999999999999999999998632
Q ss_pred ------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 636 ------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 636 ------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
..++..|+|||.+.+..|+.++|||||||++|||+||+.||.. .+..+....+...... ++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~-----------~p 562 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVA-----------YP 562 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCC-----------CC
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCC-----------CC
Confidence 2356689999999999999999999999999999999999964 3445555555544322 22
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSM-----RGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~-----~evl~ 739 (772)
...+.++.+|+.+||+.||++||++ +||.+
T Consensus 563 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 3345778999999999999999997 56553
No 177
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-36 Score=319.67 Aligned_cols=239 Identities=20% Similarity=0.335 Sum_probs=192.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+.+.+|+|+||.||+|+.. +++.||||.+....... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 89 (276)
T 2h6d_A 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMV 89 (276)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc--hhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEE
Confidence 67788999999999999976 78899999886432211 223467899999999999999999999998876 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~-- 637 (772)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999999864 346899999999999999999999988 99999999999999999999999998765432
Q ss_pred ------CCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccH
Q 004129 638 ------AKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQE 710 (772)
Q Consensus 638 ------~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 710 (772)
++..|+|||.+.+..+ +.++||||||+++|||++|+.||... ...........+.... +.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------~~ 232 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVFYI-----------PE 232 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCC-----------CT
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCcccC-----------ch
Confidence 3457899999887665 68999999999999999999999543 3333333333332111 12
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 711 NVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 711 ~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 234678899999999999999999999873
No 178
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-37 Score=336.25 Aligned_cols=242 Identities=19% Similarity=0.312 Sum_probs=194.0
Q ss_pred cccccccccceEEEEEEEE----cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTL----SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~----~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++++.+|+|+||+||+|+. .+++.||||++....... .....+.+.+|++++.++ +||||+++++++...+ .
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~ 133 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--K 133 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--E
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--e
Confidence 6788899999999999997 478899999986543211 011224577899999999 6999999999998877 6
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 7999999999999999864 346899999999999999999999988 999999999999999999999999987632
Q ss_pred ----------CCCCccccchhhhcc--CCCCCCCcHHHHHHHHHHHHcCCCcccCCC--CCHHHHHHHHhhcCCCCcccc
Q 004129 636 ----------TAAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIEN--GSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ----------~~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~ 701 (772)
..++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... .....+.........+
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 284 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP----- 284 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-----
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-----
Confidence 135667999999875 457899999999999999999999997432 2344444444433222
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 004129 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRP-----SMRGIAAK 740 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~evl~~ 740 (772)
++...+..+.+++.+||+.||++|| +++|+++.
T Consensus 285 ------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 285 ------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1223446788999999999999999 99998864
No 179
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=323.69 Aligned_cols=248 Identities=20% Similarity=0.292 Sum_probs=192.0
Q ss_pred HHHHHHhhccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEE
Q 004129 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
.++.....+-+++++.+|+|+||.||+|+.. +++.||+|.+..... .+.+.+|++++.+++||||+++++++
T Consensus 21 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~ 93 (314)
T 3com_A 21 DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------LQEIIKEISIMQQCDSPHVVKYYGSY 93 (314)
T ss_dssp ---------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-------CHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------HHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 3344334444578899999999999999975 588999998864321 24688999999999999999999999
Q ss_pred EcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 549 EEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 549 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
...+ ..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 94 ~~~~--~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 94 FKNT--DLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp EETT--EEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECC
T ss_pred EeCC--EEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEee
Confidence 8876 67999999999999999853 3457899999999999999999999988 99999999999999999999999
Q ss_pred ccCccCCC---------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004129 629 FSFWNNTT---------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 629 FGla~~~~---------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
||++.... .++..|+|||.+.+..++.++||||||+++|||+||+.||.... .............+.
T Consensus 169 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~-- 244 (314)
T 3com_A 169 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--PMRAIFMIPTNPPPT-- 244 (314)
T ss_dssp CTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCC--
T ss_pred cccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCcc--
Confidence 99875322 24557899999998899999999999999999999999996432 222222222221110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 245 F------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp C------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 112234567889999999999999999999986
No 180
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-37 Score=335.93 Aligned_cols=253 Identities=17% Similarity=0.206 Sum_probs=189.6
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. +++.||||++.............+.+.+|++++++++||||+++++++...+ ..++
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 89 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISL 89 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEE
Confidence 367888999999999999965 5889999998754332222222356889999999999999999999998776 5699
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 v~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999975 88888753 3456888999999999999999999998 9999999999999999999999999986432
Q ss_pred -------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCC-ccc------
Q 004129 637 -------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPL-KDI------ 700 (772)
Q Consensus 637 -------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~-~~~------ 700 (772)
.++..|+|||.+.+ ..++.++|||||||++|||++|..||.... ..+........ ..+. ...
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHcCCCChhhhhhhccC
Confidence 24557899999865 458999999999999999999999986432 22222222221 0110 000
Q ss_pred ---cC-Cccc-----cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 701 ---VD-PTLK-----SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 701 ---~d-~~l~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+. .... ......+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000 1113345789999999999999999999999874
No 181
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=320.89 Aligned_cols=244 Identities=20% Similarity=0.236 Sum_probs=194.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|... ++..+|+|++....... .....+.+.+|++++++++||||+++++++...+....++
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR-IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc-cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 367888999999999999964 67899999886543221 1234567999999999999999999999986544336799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++| |.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 99999876 777776555567999999999999999999999998 9999999999999999999999999875432
Q ss_pred ---------CCCccccchhhhccCC--CCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 637 ---------AAKTGSAAMELLETSA--VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ---------~~~~~~~apE~~~~~~--~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+.+.. ++.++|||||||++|||+||+.||.. .+..+.......+....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~i~~~~~~~-------- 232 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENIGKGSYAI-------- 232 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCCCC--------
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHhcCCCCC--------
Confidence 2456789999987543 37799999999999999999999963 33444444444332211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 233 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 ---PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12334678899999999999999999999964
No 182
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.7e-37 Score=326.15 Aligned_cols=249 Identities=18% Similarity=0.286 Sum_probs=191.8
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. +++.||||++...... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLV 80 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEE
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc---hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEE
Confidence 67788999999999999975 6889999988654321 122356889999999999999999999998877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||++ |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 99997 69999987655567899999999999999999999998 999999999999999999999999986421
Q ss_pred -----CCCCccccchhhhccCC-CCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc---------
Q 004129 636 -----TAAKTGSAAMELLETSA-VDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI--------- 700 (772)
Q Consensus 636 -----~~~~~~~~apE~~~~~~-~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~--------- 700 (772)
..++..|+|||.+.+.. ++.++|||||||++|||+||+.||.... ..+...............
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 12455789999987655 7999999999999999999999996433 222222222210000000
Q ss_pred ---------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 ---------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ---------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
............++++.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000111111234567899999999999999999999986
No 183
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=332.94 Aligned_cols=256 Identities=19% Similarity=0.244 Sum_probs=192.1
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC----c
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|+. .+|+.||||++..... .....+++.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46788999999999999996 4689999998854321 23345679999999999999999999999976531 2
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 359999999 8899999853 46899999999999999999999998 99999999999999999999999999864
Q ss_pred CC------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCc--------
Q 004129 635 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLK-------- 698 (772)
Q Consensus 635 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~-------- 698 (772)
.. .++..|+|||.+.+ ..++.++||||+||++|||++|+.||...+ ..+....+... ..+..
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--HLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 34557899999876 789999999999999999999999996432 22222222111 01100
Q ss_pred -----------cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004129 699 -----------DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 699 -----------~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
................++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 001111122223446788999999999999999999999874 444433
No 184
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-36 Score=344.51 Aligned_cols=253 Identities=14% Similarity=0.153 Sum_probs=180.5
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC---Cce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~---~~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|++++|||||++++++.... ...
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE---DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc---CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478889999999999999864 688999998864321 1234567999999999999999999999985432 125
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.|+||||+ +|+|.+++. ....+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 79999998 579998885 3456999999999999999999999998 999999999999999999999999998754
Q ss_pred C------------------------------------CCCccccchhhh-ccCCCCCCCcHHHHHHHHHHHHc-------
Q 004129 636 T------------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMIT------- 671 (772)
Q Consensus 636 ~------------------------------------~~~~~~~apE~~-~~~~~s~ksDVwSfGvvL~ELlt------- 671 (772)
. .++..|+|||++ ....|+.++|||||||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 2 124569999986 56679999999999999999999
Q ss_pred ----CCCcccCCCCC------------------HHHHHHHHh--hcCCC------------------CccccCCcccccc
Q 004129 672 ----GRISYSIENGS------------------LENWASEYL--KGEQP------------------LKDIVDPTLKSFQ 709 (772)
Q Consensus 672 ----G~~P~~~~~~~------------------~~~~~~~~~--~~~~~------------------~~~~~d~~l~~~~ 709 (772)
|+.+|.+.... .......+. .+... ........+....
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 55555332100 000000000 00000 0000001111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+....++.+|+.+||+.||++|||++|+++.
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3346788999999999999999999999874
No 185
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=332.98 Aligned_cols=240 Identities=13% Similarity=0.229 Sum_probs=194.0
Q ss_pred ccccccccccceEEEEEEE------EcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC---CCcccceeEEEEc
Q 004129 480 SNIIGSFSDGTVGTVYKGT------LSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~------~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~ 550 (772)
+.+.+.+|+|+||+||+|+ ...++.||||++.... ..++.+|++++.+++ |+||+++++++..
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3677889999999999994 4568899999886432 246778888888886 9999999999998
Q ss_pred CCCceEEEEEecCCCCChhhhhhhh---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-------
Q 004129 551 DEPFTRMMVFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE------- 620 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~---~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~------- 620 (772)
.+ ..++||||+++|+|.+++... ....++|..+..|+.||+.||+|||+++ ||||||||+|||++.
T Consensus 139 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 139 QN--GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp SS--CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGTCC--
T ss_pred CC--CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecccccCccc
Confidence 77 679999999999999999643 2456999999999999999999999988 999999999999998
Q ss_pred ----CCcEEEccccCccCC-----------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHH
Q 004129 621 ----DYAAKISDFSFWNNT-----------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLEN 685 (772)
Q Consensus 621 ----~~~~kL~DFGla~~~-----------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~ 685 (772)
++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 899999999998532 23567899999999999999999999999999999999998532211
Q ss_pred HHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhhhhcC
Q 004129 686 WASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQR-PSMRGIAAKLKEITAME 748 (772)
Q Consensus 686 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~ 748 (772)
............ ..+.+.+++..|++.+|.+| |+++++.+.|+++....
T Consensus 292 ------------~~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 292 ------------ECKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ------------EEEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------ceeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 000111111111 24567789999999999999 68999999998876654
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.7e-37 Score=334.24 Aligned_cols=239 Identities=19% Similarity=0.308 Sum_probs=193.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||.||+|+.. +++.+|+|.+..... .+.+|++++.++ +|||||++++++.+.+ ..+
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~ 92 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVY 92 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEE
Confidence 377889999999999999975 678899998864321 245688888888 7999999999998876 789
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~----~~~kL~DFGla~ 633 (772)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++
T Consensus 93 lv~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 93 VVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EEECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999999853 456899999999999999999999998 9999999999998433 359999999986
Q ss_pred CC---------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCC-CCHHHHHHHHhhcCCCCccccCC
Q 004129 634 NT---------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIEN-GSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 634 ~~---------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
.. ..++..|+|||.+.+..++.++|||||||++|||++|+.||.... ....+....+..+......
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~---- 244 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG---- 244 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS----
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc----
Confidence 32 223567999999988888999999999999999999999997543 3444555555444322111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......++++.+++.+||+.||++||++.|+++.
T Consensus 245 ---~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 ---GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1112345678899999999999999999999864
No 187
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.1e-36 Score=343.32 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=190.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC----c
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++++.++|||||++++++...+. .
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc---ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367888999999999999854 688899999865421 23345678999999999999999999999975432 2
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++|||||++ +|.+.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999975 5666653 34899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcc------
Q 004129 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKD------ 699 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~------ 699 (772)
.. .++..|+|||.+.+..|+.++||||+||++|||++|+.||...+ ..+....++.. ..+..+
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~--~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD--YIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCCHHHHHHcc
Confidence 32 34567999999999999999999999999999999999996432 22222222110 000000
Q ss_pred --------------------ccCCc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 700 --------------------IVDPT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 --------------------~~d~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..... ..........++.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 001112236789999999999999999999999874
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.8e-36 Score=328.71 Aligned_cols=244 Identities=20% Similarity=0.316 Sum_probs=195.6
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccc---hhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCce
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA---DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~---~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~ 555 (772)
++.+.+|.|+||.||+|+.. +|+.||||++...... .......+.+.+|+.++.++ +||||+++++++...+ .
T Consensus 97 ~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 174 (365)
T 2y7j_A 97 DPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--F 174 (365)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--E
T ss_pred ccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--E
Confidence 67788999999999999975 7899999988654321 11123356789999999999 8999999999998876 6
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 8999999999999999853 356899999999999999999999988 999999999999999999999999987533
Q ss_pred C--------CCCccccchhhhcc------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004129 636 T--------AAKTGSAAMELLET------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~--------~~~~~~~apE~~~~------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||... ...........+......
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~-- 326 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSS-- 326 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCH--
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCC--
Confidence 2 34567999998853 36889999999999999999999999643 233333333333211110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+. ....+.++.+++.+||+.||++||++.|+++
T Consensus 327 -~~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 -PE----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -HH----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -cc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0123467889999999999999999999986
No 189
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-36 Score=324.14 Aligned_cols=240 Identities=20% Similarity=0.288 Sum_probs=192.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. ++..+++|.+...... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 93 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-----ELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWI 93 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEE
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-----HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEE
Confidence 478899999999999999976 5788999987654321 2467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCcc-----
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN----- 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~----- 633 (772)
||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999998853 3456899999999999999999999988 9999999999999999999999999753
Q ss_pred ----CCCCCCccccchhhh-----ccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 634 ----NTTAAKTGSAAMELL-----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 634 ----~~~~~~~~~~apE~~-----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
....++..|+|||.+ ....++.++|||||||++|||+||+.||... +.............+. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~--~---- 242 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--NPMRVLLKIAKSDPPT--L---- 242 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCC--C----
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHhccCCcc--c----
Confidence 223456789999987 4677899999999999999999999999633 3333333333332211 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112334567889999999999999999999875
No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-36 Score=332.62 Aligned_cols=250 Identities=18% Similarity=0.294 Sum_probs=194.3
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+.. ++..+|+|++.... .....+.+.+|++++++++||||+++++++..++ ..++|
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 109 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISIC 109 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc----CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEE
Confidence 67888999999999999975 67889999886542 2334567999999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN---- 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kL~DFGla~~---- 634 (772)
|||+++|+|.+++.. ...+++..+..|+.+++.||+|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 110 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999999864 34689999999999999999999984 7 99999999999999999999999998742
Q ss_pred ---CCCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-hhcC------------CCCc
Q 004129 635 ---TTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY-LKGE------------QPLK 698 (772)
Q Consensus 635 ---~~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~-~~~~------------~~~~ 698 (772)
...++..|+|||.+.+..++.++|||||||++|||+||+.||.............. ..+. ....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 23456789999999999999999999999999999999999964332111111000 0000 0000
Q ss_pred -------------ccc----CCcccc-ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 699 -------------DIV----DPTLKS-FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 699 -------------~~~----d~~l~~-~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
+.. ...... .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 000000 011235678999999999999999999999864
No 191
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-36 Score=323.92 Aligned_cols=239 Identities=20% Similarity=0.295 Sum_probs=196.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||.||+|+.. +++.||+|.+...... ...+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 97 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWI 97 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEE
Confidence 477889999999999999864 6889999988654322 23467999999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 98 v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 98 IMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp EEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred EEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999999985 356899999999999999999999998 9999999999999999999999999875322
Q ss_pred -------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 -------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+.+..++.++||||||+++|||+||+.||... ...+..........+ ...
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~----------~~~ 240 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--HPMKVLFLIPKNNPP----------TLE 240 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCC----------CCC
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--CHHHHHHHhhcCCCC----------CCc
Confidence 2455789999999999999999999999999999999999533 223333222222111 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAAKL 741 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L 741 (772)
...+.++.+++.+||+.||++|||+.|+++..
T Consensus 241 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 241 GNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 23346788999999999999999999998753
No 192
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.5e-36 Score=331.21 Aligned_cols=264 Identities=18% Similarity=0.218 Sum_probs=197.5
Q ss_pred HHHHHHhhccccccccccccceEEEEEEEEcCCcEEEEEEeeecccch------hhhhHHHHHHHHHHHHhccCCCcccc
Q 004129 470 SELEAACEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD------WSKNLESQFRKKIDTLSKVNHKNFVN 543 (772)
Q Consensus 470 ~el~~~~~~f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~------~~~~~~~~f~~Ei~~L~~l~HpNIV~ 543 (772)
.++....++| ++.+.+|+|+||.||+|+..++..||||++....... ......+.+.+|++++++++||||++
T Consensus 15 ~~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 15 AELHAMQSPY-TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHTTCSC-EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHhccce-EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 3444444444 7788999999999999998889999999886543221 11233478999999999999999999
Q ss_pred eeEEEEcCC---CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC
Q 004129 544 LIGYCEEDE---PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 544 l~g~~~~~~---~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~ 620 (772)
+++++...+ ....++||||++ |+|.+++.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcC
Confidence 999986532 225799999997 688888863 3456999999999999999999999998 999999999999999
Q ss_pred CCcEEEccccCccCCC--------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh
Q 004129 621 DYAAKISDFSFWNNTT--------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL 691 (772)
Q Consensus 621 ~~~~kL~DFGla~~~~--------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~ 691 (772)
++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~ 247 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLNKIV 247 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 9999999999986322 23456899999876 678999999999999999999999996432 222222221
Q ss_pred h--cCCC-------------------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 692 K--GEQP-------------------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 692 ~--~~~~-------------------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
. +... ...................+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1 0000 00000111111223345678999999999999999999999864
No 193
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-36 Score=344.83 Aligned_cols=266 Identities=14% Similarity=0.193 Sum_probs=204.2
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc-ccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN-FVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN-IV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||.||+|+. .+++.||||++...... .++.+|++++..++|++ |..+..++...+ ..+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~ 79 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNV 79 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEE
Confidence 37788999999999999996 56889999987654322 35789999999998754 555555555555 679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccC
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNN 634 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~ 634 (772)
+||||+ +|+|.+++.. ....+++..++.|+.||+.||+|||+.+ ||||||||+|||| +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 9999999863 3456999999999999999999999998 9999999999999 6889999999999753
Q ss_pred C----------------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC-CHHHHHHHHhhcCCCC
Q 004129 635 T----------------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENG-SLENWASEYLKGEQPL 697 (772)
Q Consensus 635 ~----------------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~-~~~~~~~~~~~~~~~~ 697 (772)
. ..++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--- 232 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--- 232 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH---
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc---
Confidence 2 2245578999999999999999999999999999999999975332 2222222211110
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCCCchHHHHhhh
Q 004129 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPDGATPKLSPLWWAELEIL 767 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~p~~~~~~~~~~~~~ 767 (772)
....+......++.++.+++..||+.+|++||++.+|++.|+++...... +......|+.+...
T Consensus 233 ---~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~---~~~~~~dW~~~~~~ 296 (483)
T 3sv0_A 233 ---VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF---QFDYVFDWTILKYQ 296 (483)
T ss_dssp ---HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC---CCSSCCHHHHHTC-
T ss_pred ---ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC---CccCCcCchhhccc
Confidence 00111112223457899999999999999999999999999998765432 34456777766443
No 194
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-38 Score=339.11 Aligned_cols=249 Identities=21% Similarity=0.344 Sum_probs=180.2
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhc--cCCCcccceeEEEEcCCC--ce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSK--VNHKNFVNLIGYCEEDEP--FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~--l~HpNIV~l~g~~~~~~~--~~ 555 (772)
+++.+.+|+|+||+||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++..... ..
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT--------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEecccc--------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 367788999999999999875 8899999875322 2457778888887 799999999999887542 14
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCeEeeCCCCCCeEECCCCcEEEc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH--------QLTPPIAHRNLQSSSIYLTEDYAAKIS 627 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH--------~~~~~IvHrDLKp~NILld~~~~~kL~ 627 (772)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eEEEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEe
Confidence 6999999999999999953 35788889999999999999999 766 9999999999999999999999
Q ss_pred cccCccCCC-------------CCCccccchhhhccC------CCCCCCcHHHHHHHHHHHHcC----------CCcccC
Q 004129 628 DFSFWNNTT-------------AAKTGSAAMELLETS------AVDLESNVYSFGTILFEMITG----------RISYSI 678 (772)
Q Consensus 628 DFGla~~~~-------------~~~~~~~apE~~~~~------~~s~ksDVwSfGvvL~ELltG----------~~P~~~ 678 (772)
|||+++... .++..|+|||.+.+. .++.++|||||||++|||+|| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 999875321 356679999998765 344689999999999999999 566642
Q ss_pred CC---CCHHHHHHHHhhcCCCCccccCCcccc--ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcC
Q 004129 679 EN---GSLENWASEYLKGEQPLKDIVDPTLKS--FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAME 748 (772)
Q Consensus 679 ~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 748 (772)
.. ....+........ ...+.... ......+.+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TCC-CCCCC-CHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cCCCCccHHHHHHHHHHh------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11 1111111111111 11111111 12366788999999999999999999999999999987643
No 195
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.1e-37 Score=332.00 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=186.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 110 (329)
T 3gbz_A 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE---EGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHL 110 (329)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc---cccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEE
Confidence 477889999999999999854 7889999998654321 233457889999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-----CCCCcEEEccccCcc
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL-----TEDYAAKISDFSFWN 633 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl-----d~~~~~kL~DFGla~ 633 (772)
||||++ |+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++
T Consensus 111 v~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999997 599999853 346899999999999999999999998 9999999999999 455679999999875
Q ss_pred CC---------CCCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccc--
Q 004129 634 NT---------TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDI-- 700 (772)
Q Consensus 634 ~~---------~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~-- 700 (772)
.. ..++..|+|||.+.+. .++.++|||||||++|||+||+.||.... ..+........ ..+....
T Consensus 186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--EIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--HHHHHHHHHHHhCCCchhhhh
Confidence 32 1235679999998764 58999999999999999999999996432 22222222211 0000000
Q ss_pred ---------------cCCccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 ---------------VDPTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ---------------~d~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+. .......+++.+|+.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000 011124567899999999999999999999985
No 196
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=339.21 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=179.3
Q ss_pred cccc-cccccceEEEEEEEEc---CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIG-SFSDGTVGTVYKGTLS---SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fg~Vykg~~~---~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.| ++|+|+||+||+|+.. +++.||+|++..... ...+.+|+++|++++|||||++++++........
T Consensus 23 ~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 23 EYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp ECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 4545 6999999999999965 578899998864321 2368899999999999999999999976444478
Q ss_pred EEEEecCCCCChhhhhhhhc-------cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE----CCCCcEE
Q 004129 557 MMVFEYSPNGSLFEHLHIQE-------AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL----TEDYAAK 625 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~-------~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl----d~~~~~k 625 (772)
++||||+. |+|.+++.... ...+++..+..|+.||+.||+|||+.+ |+||||||+|||+ +.++.+|
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999996 58888875321 224899999999999999999999998 9999999999999 7789999
Q ss_pred EccccCccCCC------------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH-------HH
Q 004129 626 ISDFSFWNNTT------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSL-------EN 685 (772)
Q Consensus 626 L~DFGla~~~~------------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-------~~ 685 (772)
|+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....+. .+
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 99999986432 23557999999876 458999999999999999999999996443211 11
Q ss_pred HHHHHhhc-CCCCccccCCcccccc---------------------------HHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004129 686 WASEYLKG-EQPLKDIVDPTLKSFQ---------------------------ENVLEELLVVIKNCVHPDPKQRPSMRGI 737 (772)
Q Consensus 686 ~~~~~~~~-~~~~~~~~d~~l~~~~---------------------------~~~~~~l~~Li~~Cl~~dP~~RPs~~ev 737 (772)
.+..+... ..+.... .+.+...+ .....++.+|+.+||+.||++|||+.|+
T Consensus 253 ~l~~i~~~~g~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKD-WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHCCCCTTT-CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHhhCCCChhh-cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 11111110 0000000 00000000 0014568899999999999999999999
Q ss_pred HHH
Q 004129 738 AAK 740 (772)
Q Consensus 738 l~~ 740 (772)
++.
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 874
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.4e-36 Score=343.66 Aligned_cols=242 Identities=21% Similarity=0.283 Sum_probs=192.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. ++..+|+|++....... .....+.+|++++++++|||||++++++.+.. ..++
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 113 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST---SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYL 113 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc---hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 477889999999999999975 67889999987543221 12357899999999999999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 114 v~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 114 VMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999999998853 356899999999999999999999998 999999999999976 456999999987532
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+. ..++.++||||+||++|||++|+.||.. ....+....+..+..... .+.
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~~--- 260 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG--QTDQEILRKVEKGKYTFD---SPE--- 260 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---SGG---
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC---chh---
Confidence 23566899999886 5699999999999999999999999963 344455555554432211 111
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 261 -~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 -WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 12345678899999999999999999999854
No 198
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.1e-36 Score=345.39 Aligned_cols=243 Identities=21% Similarity=0.274 Sum_probs=198.7
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+.. +++.||||++....... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 103 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYL 103 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 477888999999999999975 78899999986543221 223467999999999999999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE---CCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL---TEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl---d~~~~~kL~DFGla~~~ 635 (772)
||||+.+|+|.+++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999885 3456899999999999999999999998 9999999999999 56789999999987543
Q ss_pred C--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 T--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
. .++..|+|||.+.+ .++.++||||+||++|||++|+.||... +..+....+..+..... .+
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~---~~---- 249 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFE---LP---- 249 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---SG----
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCC---Cc----
Confidence 2 24668999999865 6999999999999999999999999643 34444444444432211 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....++++.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 112345678899999999999999999999864
No 199
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-36 Score=329.44 Aligned_cols=248 Identities=21% Similarity=0.323 Sum_probs=193.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 102 (331)
T 4aaa_A 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD---DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLV 102 (331)
T ss_dssp EEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred eeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC---chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEE
Confidence 67889999999999999975 588999998865432 2334567889999999999999999999999877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC----
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT---- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~---- 635 (772)
|||+++++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999999888764 3456999999999999999999999998 999999999999999999999999988542
Q ss_pred -----CCCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--------------cCC
Q 004129 636 -----TAAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--------------GEQ 695 (772)
Q Consensus 636 -----~~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--------------~~~ 695 (772)
..++..|+|||.+.+. .++.++|||||||++|||+||+.||..... .+....... ...
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD--IDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 2345678999998765 789999999999999999999999964332 111111110 000
Q ss_pred CCccccCCccc------cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 696 PLKDIVDPTLK------SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~~~~d~~l~------~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.......+... ...+..++++.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00011111111 111234678999999999999999999999886
No 200
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.8e-37 Score=339.32 Aligned_cols=248 Identities=8% Similarity=0.057 Sum_probs=176.1
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc--CCCccccee-------EEEEc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV--NHKNFVNLI-------GYCEE 550 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l--~HpNIV~l~-------g~~~~ 550 (772)
++.+.+|+|+||+||+|+.. +++.||||++....... ....+.+.+|++++..+ +|||||+++ +++..
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS--RSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH--HHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc--ccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 67788999999999999965 78899999987654322 33456788885444444 699987755 55543
Q ss_pred CCC---------------ceEEEEEecCCCCChhhhhhhhccCCCCHHHH------HHHHHHHHHHHHHHhcCCCCeEee
Q 004129 551 DEP---------------FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMR------LRIAMGMAYCLEHMHQLTPPIAHR 609 (772)
Q Consensus 551 ~~~---------------~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~------~~Ia~~ia~gL~yLH~~~~~IvHr 609 (772)
.+. ...++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||+.+ |+||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivHr 218 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVHG 218 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEET
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--CccC
Confidence 321 23799999998 89999997542 23455556 788899999999999998 9999
Q ss_pred CCCCCCeEECCCCcEEEccccCccCCC------CCCccccchhhhcc--CCCCCCCcHHHHHHHHHHHHcCCCcccCCCC
Q 004129 610 NLQSSSIYLTEDYAAKISDFSFWNNTT------AAKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISYSIENG 681 (772)
Q Consensus 610 DLKp~NILld~~~~~kL~DFGla~~~~------~~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~ 681 (772)
||||+|||++.++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999986432 23467999999977 7799999999999999999999999975432
Q ss_pred CHHHHHHHHhhcCCCCccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 682 SLENWASEYLKGEQPLKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
..... ... ........... .......++++.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGS----WKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTC----CCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccc----hhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11000 000 00000000000 0111245678899999999999999999999975
No 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=321.85 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=188.6
Q ss_pred ccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEEec
Q 004129 484 GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVFEY 562 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~Ey 562 (772)
..+|+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++++++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCC-----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCc-----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 4678899999999996 467889999886543 223467999999999999999999999998877 67999999
Q ss_pred CCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-CCcEEEccccCccCCC----
Q 004129 563 SPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE-DYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 563 ~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~-~~~~kL~DFGla~~~~---- 636 (772)
+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999986542 235678899999999999999999988 999999999999987 8999999999875432
Q ss_pred -----CCCccccchhhhccC--CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 637 -----AAKTGSAAMELLETS--AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 637 -----~~~~~~~apE~~~~~--~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.++..|+|||.+... .++.++||||||+++|||+||+.||................... + ..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------~---~~~ 248 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-------P---EIP 248 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC-------C---CCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc-------c---ccc
Confidence 345678999998654 38899999999999999999999996433322222221111111 1 122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
...+.++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 334567889999999999999999999986
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-36 Score=332.21 Aligned_cols=253 Identities=13% Similarity=0.190 Sum_probs=198.4
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhh------------hhHHHHHHHHHHHHhccCCCcccceeEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWS------------KNLESQFRKKIDTLSKVNHKNFVNLIGYC 548 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~------------~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~ 548 (772)
++++.+|+|+||.||+|+. +++.||+|.+......... ....+.|.+|++++.+++||||+++++++
T Consensus 34 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 112 (348)
T 2pml_X 34 RIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII 112 (348)
T ss_dssp EEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEE
T ss_pred EEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 6788899999999999999 8999999998654321100 01126799999999999999999999999
Q ss_pred EcCCCceEEEEEecCCCCChhhh------hhhhccCCCCHHHHHHHHHHHHHHHHHHhc-CCCCeEeeCCCCCCeEECCC
Q 004129 549 EEDEPFTRMMVFEYSPNGSLFEH------LHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-LTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 549 ~~~~~~~~~LV~Ey~~~GsL~~~------L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-~~~~IvHrDLKp~NILld~~ 621 (772)
.+.+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||+++.+
T Consensus 113 ~~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 113 TNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKN 188 (348)
T ss_dssp ESSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEECTT
T ss_pred eeCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEEcCC
Confidence 9877 67999999999999998 644335779999999999999999999998 88 9999999999999999
Q ss_pred CcEEEccccCccCC-------CCCCccccchhhhccC-CCCC-CCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004129 622 YAAKISDFSFWNNT-------TAAKTGSAAMELLETS-AVDL-ESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 622 ~~~kL~DFGla~~~-------~~~~~~~~apE~~~~~-~~s~-ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
+.+||+|||++... ..++..|+|||.+.+. .++. ++|||||||++|||+||+.||...... .+.......
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i~~ 267 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNIRT 267 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHHTS
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhc
Confidence 99999999988643 2355679999998776 6666 999999999999999999999744332 334444433
Q ss_pred cCCCCccccC----Cc----cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 693 GEQPLKDIVD----PT----LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 693 ~~~~~~~~~d----~~----l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+......... +. ........+.++.+++.+||+.||++||++.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3222111000 00 00011334568899999999999999999999986
No 203
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.6e-36 Score=321.47 Aligned_cols=241 Identities=17% Similarity=0.252 Sum_probs=184.3
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||+||+|+. .+++.||+|++...... ....+.+.++...++.++||||+++++++.+.+ ..++|
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv 84 (290)
T 3fme_A 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWIC 84 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEE
T ss_pred hhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc---HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEE
Confidence 6788999999999999996 47889999988654221 223344556666688899999999999999876 67999
Q ss_pred EecCCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC-
Q 004129 560 FEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT- 635 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~- 635 (772)
|||++ |+|.+++... ....+++..+..|+.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99997 5888887532 356799999999999999999999986 8 999999999999999999999999987532
Q ss_pred -------CCCCccccchhhh----ccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCc
Q 004129 636 -------TAAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 636 -------~~~~~~~~apE~~----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 704 (772)
..++..|+|||.+ ....++.++|||||||++|||+||+.||.......... ........+. .
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~--~---- 234 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL-KQVVEEPSPQ--L---- 234 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH-HHHHHSCCCC--C----
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH-HHHhccCCCC--c----
Confidence 2355679999996 56678999999999999999999999996433333332 2233221111 0
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 01233467889999999999999999999987
No 204
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5e-36 Score=324.18 Aligned_cols=245 Identities=16% Similarity=0.209 Sum_probs=189.8
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||+||+|+. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+......+
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 36788999999999999985 578899999876322 356899999999997 99999999999875444679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC-cEEEccccCccCCC
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY-AAKISDFSFWNNTT 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~-~~kL~DFGla~~~~ 636 (772)
+||||+++++|.+++. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++...
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999998873 3889999999999999999999998 99999999999999776 89999999986322
Q ss_pred --------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH-----------h-hcCC
Q 004129 637 --------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY-----------L-KGEQ 695 (772)
Q Consensus 637 --------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~-----------~-~~~~ 695 (772)
.++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............. . ....
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 24557899999876 6799999999999999999999999964333222111100 0 0000
Q ss_pred CCc----cccC----Ccc-----ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 696 PLK----DIVD----PTL-----KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 696 ~~~----~~~d----~~l-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... +... ... .......+.++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 0000 000 0111224678899999999999999999999986
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.8e-36 Score=328.92 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=190.2
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC----c
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+. .
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC---ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367888999999999999864 688899998865322 13345678999999999999999999999976542 2
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||++ |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 5799999997 57888774 35899999999999999999999998 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC-CCcc------
Q 004129 635 TT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ-PLKD------ 699 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~-~~~~------ 699 (772)
.. .++..|+|||.+.+..++.++|||||||++|||+||+.||...+ ..+.......... +..+
T Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--HIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhh
Confidence 32 24557999999999999999999999999999999999996432 2222222221100 0000
Q ss_pred ------------------------ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 700 ------------------------IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ------------------------~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
..-+...........++.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000011123346789999999999999999999999874
No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.8e-36 Score=341.95 Aligned_cols=242 Identities=21% Similarity=0.275 Sum_probs=197.5
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||||++....... .....+.+|++++++++|||||++++++.+.. ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 98 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEE
Confidence 478889999999999999975 68899999986533221 12467899999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC---CCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT---EDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld---~~~~~kL~DFGla~~~ 635 (772)
||||+++|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 99 VGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999999998854 356899999999999999999999998 99999999999995 4578999999998643
Q ss_pred --------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 --------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 --------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
..++..|+|||.+.+ .++.++||||+||++|||++|+.||.. .+..+....+..+..... .+
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~---- 244 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFD---LP---- 244 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCSC---SG----
T ss_pred CCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC---Cc----
Confidence 235668999999875 599999999999999999999999954 334444444444432211 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112345678899999999999999999999874
No 207
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.5e-36 Score=329.71 Aligned_cols=269 Identities=15% Similarity=0.200 Sum_probs=199.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC---CceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE---PFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~---~~~~ 556 (772)
++.+.+|+|+||+||+|+.. +++.||||++.... ......++.+|++++++++||||+++++++.... ....
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD----KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS----SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc----cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 67788999999999999975 68889999885432 1334567889999999999999999999987541 1257
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 699988853 46899999999999999999999998 9999999999999999999999999876432
Q ss_pred -------------------CCCccccchhhhc-cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh--hcC
Q 004129 637 -------------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KGE 694 (772)
Q Consensus 637 -------------------~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~--~~~ 694 (772)
.++..|+|||.+. ...++.++|||||||++|||++|+.||..... ........ .+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQLLLIFGIIGT 241 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCC
Confidence 2355689999875 47789999999999999999999999964332 22111111 111
Q ss_pred CCCcc----cc---------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhcCCCCCC
Q 004129 695 QPLKD----IV---------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAMEPDGAT 753 (772)
Q Consensus 695 ~~~~~----~~---------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~~~~~~~ 753 (772)
..... .. ...........+.++.+++.+||+.||++|||+.|+++. ++...........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~ 321 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG 321 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCccccccc
Confidence 11000 00 000111122445778899999999999999999999873 4444443333333
Q ss_pred CCCCCchH
Q 004129 754 PKLSPLWW 761 (772)
Q Consensus 754 p~~~~~~~ 761 (772)
...++..|
T Consensus 322 ~~~~~~~~ 329 (353)
T 2b9h_A 322 EPIPPSFF 329 (353)
T ss_dssp CCCCGGGG
T ss_pred CCCCccee
Confidence 33444443
No 208
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.1e-36 Score=328.83 Aligned_cols=240 Identities=18% Similarity=0.270 Sum_probs=190.4
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHH-HhccCCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDT-LSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~-L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||+||+|+. .+++.||||++...... ....++..|+.+ ++.++||||+++++++...+ ..++
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~l 127 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS----QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWI 127 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC----HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEE
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc----HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEE
Confidence 6778899999999999996 57889999988654321 223455556555 78889999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhh--ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQ--EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~--~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
||||+++ +|.+++... ....+++..+..|+.||+.||+|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999974 998888642 456799999999999999999999985 7 999999999999999999999999987532
Q ss_pred --------CCCCccccchhhhc----cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 636 --------TAAKTGSAAMELLE----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 636 --------~~~~~~~~apE~~~----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
..++..|+|||.+. ...++.++|||||||++|||+||+.||....... ...........+.
T Consensus 205 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~------ 277 (340)
T 3an0_A 205 VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEPSPQ------ 277 (340)
T ss_dssp SCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHHHHHHHSCCCC------
T ss_pred ccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-HHHHHHhcCCCCC------
Confidence 34667899999964 3478999999999999999999999996433322 2233333322110
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....++.++.+++.+||+.||++||++.|+++
T Consensus 278 -~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -L--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -C--CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -C--CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 11234567899999999999999999999987
No 209
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-36 Score=340.06 Aligned_cols=245 Identities=20% Similarity=0.277 Sum_probs=188.0
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh---hhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW---SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~---~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+.+.+.+|+|+||+||+|... +++.||||++..+..... .......+.+|+++|++++|||||++++++... .
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~ 213 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---D 213 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---E
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---c
Confidence 477889999999999999864 578999999876432211 111223588999999999999999999998654 4
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kL~DFGla 632 (772)
.++||||+++|+|.+++. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 689999999999999885 3456999999999999999999999988 9999999999999654 45999999998
Q ss_pred cCCC--------CCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcccc
Q 004129 633 NNTT--------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 633 ~~~~--------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (772)
+... .++..|+|||.+. ...++.++|||||||++|||+||+.||....... ........+....
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~~~---- 364 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNF---- 364 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCCCC----
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCCCC----
Confidence 7532 2456899999974 4678899999999999999999999996432211 1111111111110
Q ss_pred CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 702 DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 702 d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........++++.+++.+||+.||++||++.|+++
T Consensus 365 ---~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 ---IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 01111234567899999999999999999999986
No 210
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.1e-36 Score=338.70 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=162.8
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc------CCCcccceeEEEEcCC
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV------NHKNFVNLIGYCEEDE 552 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l------~HpNIV~l~g~~~~~~ 552 (772)
+++++.+|+|+||+||+|+.. +++.||||++... ....+.+.+|++++..+ +|+||+++++++...+
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 477889999999999999865 5789999988642 22345677888888777 5779999999998877
Q ss_pred CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc--EEEcccc
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA--AKISDFS 630 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~--~kL~DFG 630 (772)
..++||||+. |+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++. +||+|||
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred --eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecc
Confidence 7899999996 69999987655567999999999999999999999988 999999999999999887 9999999
Q ss_pred CccCC------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCC
Q 004129 631 FWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 631 la~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 248 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 97533 23556799999999999999999999999999999999999644
No 211
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.2e-36 Score=322.23 Aligned_cols=252 Identities=18% Similarity=0.234 Sum_probs=192.8
Q ss_pred ccccccccccceEEEEEEEE--cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc---CCCcccceeEEEEc---C
Q 004129 480 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV---NHKNFVNLIGYCEE---D 551 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~--~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l---~HpNIV~l~g~~~~---~ 551 (772)
+++++.+|+|+||+||+|+. .+++.||+|++........ ....+.+|+++++.+ +||||+++++++.. .
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc---CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 37788999999999999997 4678899998875432211 112456677776665 89999999999872 1
Q ss_pred CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccC
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSF 631 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGl 631 (772)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 2226799999997 69999987555556999999999999999999999998 99999999999999999999999999
Q ss_pred ccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc--CCCCccc-
Q 004129 632 WNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG--EQPLKDI- 700 (772)
Q Consensus 632 a~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~--~~~~~~~- 700 (772)
++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ..+........ .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcCCCCcccCc
Confidence 86432 34567899999998999999999999999999999999996432 22222222211 0000000
Q ss_pred -------------cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 -------------VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 -------------~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+..+....+.++.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001111222345677889999999999999999999985
No 212
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-36 Score=334.57 Aligned_cols=251 Identities=17% Similarity=0.201 Sum_probs=193.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC--------CCcccceeEEEEc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--------HKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--------HpNIV~l~g~~~~ 550 (772)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 47888999999999999985 46788999988632 223467889999999986 8889999998873
Q ss_pred C--CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCC-----
Q 004129 551 D--EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDY----- 622 (772)
Q Consensus 551 ~--~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~----- 622 (772)
. .....++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhh
Confidence 2 222679999999 67777777655556799999999999999999999997 7 99999999999999775
Q ss_pred --------------------------------------------cEEEccccCccCC------CCCCccccchhhhccCC
Q 004129 623 --------------------------------------------AAKISDFSFWNNT------TAAKTGSAAMELLETSA 652 (772)
Q Consensus 623 --------------------------------------------~~kL~DFGla~~~------~~~~~~~~apE~~~~~~ 652 (772)
.+||+|||+++.. ..++..|+|||.+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence 7999999998633 23566899999999999
Q ss_pred CCCCCcHHHHHHHHHHHHcCCCcccCCCCC----HHHHHHHHhh--cCCC-------------------CccccCCc---
Q 004129 653 VDLESNVYSFGTILFEMITGRISYSIENGS----LENWASEYLK--GEQP-------------------LKDIVDPT--- 704 (772)
Q Consensus 653 ~s~ksDVwSfGvvL~ELltG~~P~~~~~~~----~~~~~~~~~~--~~~~-------------------~~~~~d~~--- 704 (772)
++.++|||||||++|||+||+.||...... .......... +..+ ...+.+..
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 999999999999999999999999743321 1111111110 1000 00000000
Q ss_pred -------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 705 -------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 705 -------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....+.....++.+|+.+||+.||++|||+.|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234567788999999999999999999999985
No 213
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=323.36 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=191.0
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCC----Cc
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDE----PF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~----~~ 554 (772)
++++.+|+|+||.||+|+. .+++.||||++..... ..+.+.+|++++.++ +||||+++++++.... ..
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred EEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 6788999999999999997 4688999998864332 135788999999999 8999999999997632 22
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 6799999999999999997655567999999999999999999999988 99999999999999999999999998764
Q ss_pred CC---------CCCccccchhhhc-----cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004129 635 TT---------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~---------~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .++..|+|||.+. ...++.++|||||||++|||+||+.||.... ............. ...
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~--~~~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPA--PRL 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC--CCC
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCcc--ccC
Confidence 32 2456799999986 5678999999999999999999999995332 2222222222211 111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
. ....+.++.+++.+||+.||++||++.|+++
T Consensus 255 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 K-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp S-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred C-------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 1123467889999999999999999999987
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6e-37 Score=326.71 Aligned_cols=247 Identities=19% Similarity=0.289 Sum_probs=179.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||+||+|+. .+++.||||.+..... ....+++.+|++++++++||||+++++++...+ ..++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 90 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC----QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWL 90 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEE
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc----chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEE
Confidence 36788999999999999985 4678999998764322 223457889999999999999999999998877 6799
Q ss_pred EEecCCCCChhhhhhhh------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 559 VFEYSPNGSLFEHLHIQ------EAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~------~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999998632 2345899999999999999999999988 999999999999999999999999986
Q ss_pred cCC--------------CCCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCC-
Q 004129 633 NNT--------------TAAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQP- 696 (772)
Q Consensus 633 ~~~--------------~~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~- 696 (772)
... ..++..|+|||.+.. ..++.++|||||||++|||+||+.||...... ...........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLTLQNDPPS 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHHHHHTSSCCC
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHHHHhccCCCc
Confidence 432 124557999999865 56899999999999999999999999643322 112222222111
Q ss_pred Ccc-ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 697 LKD-IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~~-~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
... ..++ ......+.++.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 110 0011 111234467889999999999999999999986
No 215
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6e-36 Score=323.80 Aligned_cols=248 Identities=19% Similarity=0.275 Sum_probs=193.9
Q ss_pred ccccccccccceEEEEEEEE--cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc------ccceeEEEEcC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL--SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 551 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~--~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN------IV~l~g~~~~~ 551 (772)
+++++.+|+|+||+||+|.. .+++.||||++... ....+.+.+|++++..++|+| |+++++++...
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 47888999999999999986 36788999987532 223467889999999887765 99999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC-----------
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE----------- 620 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~----------- 620 (772)
+ ..++||||+ +|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 90 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 G--HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC---
T ss_pred C--cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCcc
Confidence 7 789999999 899999997655557899999999999999999999998 999999999999987
Q ss_pred --------CCcEEEccccCccCCC------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH-HH
Q 004129 621 --------DYAAKISDFSFWNNTT------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 685 (772)
Q Consensus 621 --------~~~~kL~DFGla~~~~------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~ 685 (772)
++.+||+|||+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||...+... ..
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 244 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred ccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 6689999999976432 34667999999999999999999999999999999999996433211 11
Q ss_pred HHHHHhhcCCCCc--------cc---------------------cCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 686 WASEYLKGEQPLK--------DI---------------------VDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 686 ~~~~~~~~~~~~~--------~~---------------------~d~--~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.+.... +..+.. .. ..+ ..........+++.+++.+||+.||++|||+
T Consensus 245 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 245 MMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111111 100000 00 000 0001123557789999999999999999999
Q ss_pred HHHHH
Q 004129 735 RGIAA 739 (772)
Q Consensus 735 ~evl~ 739 (772)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
No 216
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-35 Score=315.97 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=196.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccc----hhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCc
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRA----DWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~----~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~ 554 (772)
++.+.+|+|+||.||+|+.. +++.||||.+...... .......+.+.+|++++.+++ ||||+++++++...+
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-- 97 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-- 97 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--
Confidence 67888999999999999975 6788999998654311 111234567899999999995 999999999998876
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 67999999999999999864 356899999999999999999999998 99999999999999999999999998754
Q ss_pred CC--------CCCccccchhhhc------cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccc
Q 004129 635 TT--------AAKTGSAAMELLE------TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDI 700 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~~------~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (772)
.. .++..|+|||.+. ...++.++||||||+++|||++|+.||... +..........+.....
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~-- 249 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFG-- 249 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCC--
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccC--
Confidence 32 2455789999874 456889999999999999999999999543 33333344433322111
Q ss_pred cCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 701 VDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 701 ~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.+ .....+.++.+++.+||+.||++|||+.|+++
T Consensus 250 -~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 -SP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -TT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -cc----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11 11234567889999999999999999999975
No 217
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.7e-36 Score=328.56 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=189.7
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC------
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 552 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------ 552 (772)
+++++.+|+|+||+||+|+. .+++.||+|++....... .....+.+|++++++++||||+++++++....
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 37788999999999999997 578899999886543322 22346889999999999999999999997643
Q ss_pred CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 553 PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 553 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
....++||||++ |+|.+.+.. ....+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 125799999997 477777753 3356999999999999999999999998 999999999999999999999999987
Q ss_pred cCCC-------------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHh--hcCCC
Q 004129 633 NNTT-------------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYL--KGEQP 696 (772)
Q Consensus 633 ~~~~-------------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~--~~~~~ 696 (772)
+... .++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... ........ .+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCC
Confidence 5321 23556899998865 5689999999999999999999999964332 22221111 11111
Q ss_pred Cc---cc-----------cCCccccccHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 697 LK---DI-----------VDPTLKSFQEN-----VLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 697 ~~---~~-----------~d~~l~~~~~~-----~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .. ........... ..+++.+|+.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 00 00000001111 1356889999999999999999999987
No 218
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9e-36 Score=341.95 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=194.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchh--------hhhHHHHHHHHHHHHhccCCCcccceeEEEEc
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADW--------SKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~--------~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+.+++.+|+|+||+||+|+.. ++..+|+|++........ .....+.+.+|++++++++|||||++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 477889999999999999975 578899999875432110 01234678999999999999999999999998
Q ss_pred CCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCC---cEEEc
Q 004129 551 DEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDY---AAKIS 627 (772)
Q Consensus 551 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~---~~kL~ 627 (772)
.. ..++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 118 ~~--~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 118 KK--YFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp SS--EEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred CC--EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEE
Confidence 76 67999999999999998853 356999999999999999999999998 99999999999998775 69999
Q ss_pred cccCccCC--------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCcc
Q 004129 628 DFSFWNNT--------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKD 699 (772)
Q Consensus 628 DFGla~~~--------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 699 (772)
|||+++.. ..++..|+|||.+. ..++.++||||+||++|||++|+.||.. .+..+....+..+......
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG--QNDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCH
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCCCc
Confidence 99998532 23566899999986 5699999999999999999999999964 3444555555444321110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 269 -------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 269 -------NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp -------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0012345678999999999999999999999863
No 219
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-36 Score=333.42 Aligned_cols=247 Identities=18% Similarity=0.263 Sum_probs=187.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC------
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------ 552 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------ 552 (772)
+++++.+|+|+||+||+|+. .+++.||||++..... ...+|++++++++|||||++++++....
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 37788999999999999986 5789999998864321 2347999999999999999999985432
Q ss_pred ------------------------------CceEEEEEecCCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHh
Q 004129 553 ------------------------------PFTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH 600 (772)
Q Consensus 553 ------------------------------~~~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH 600 (772)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123789999998 688887753 24567999999999999999999999
Q ss_pred cCCCCeEeeCCCCCCeEEC-CCCcEEEccccCccCCC--------CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHH
Q 004129 601 QLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMI 670 (772)
Q Consensus 601 ~~~~~IvHrDLKp~NILld-~~~~~kL~DFGla~~~~--------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELl 670 (772)
+.+ |+||||||+|||++ +++.+||+|||+++... .++..|+|||.+.+. .++.++||||+||++|||+
T Consensus 159 ~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 159 SLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp TTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred HCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 988 99999999999997 68999999999986432 235568999998764 4899999999999999999
Q ss_pred cCCCcccCCCCCHHHHHHHHhh--cCC----------CCccccCCcc-----c-cccHHHHHHHHHHHHHcccCCCCCCC
Q 004129 671 TGRISYSIENGSLENWASEYLK--GEQ----------PLKDIVDPTL-----K-SFQENVLEELLVVIKNCVHPDPKQRP 732 (772)
Q Consensus 671 tG~~P~~~~~~~~~~~~~~~~~--~~~----------~~~~~~d~~l-----~-~~~~~~~~~l~~Li~~Cl~~dP~~RP 732 (772)
+|+.||.... ..+....... +.. ...+..-+.. . .++...+.++.+|+.+||+.||++||
T Consensus 237 ~g~~pf~~~~--~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 237 LGKPLFSGET--SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred hCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999996432 2222222211 100 0000000110 0 12233556799999999999999999
Q ss_pred CHHHHHHH
Q 004129 733 SMRGIAAK 740 (772)
Q Consensus 733 s~~evl~~ 740 (772)
|+.|+++.
T Consensus 315 t~~e~l~h 322 (383)
T 3eb0_A 315 NPYEAMAH 322 (383)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999853
No 220
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.3e-36 Score=323.34 Aligned_cols=243 Identities=21% Similarity=0.289 Sum_probs=188.5
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~ 555 (772)
+++++.+|+|+||.||+|+.. +++.||||.+....... ........+.+|++++++++||||+++++++...+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 88 (322)
T 2ycf_A 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED--- 88 (322)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS---
T ss_pred eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc---
Confidence 478889999999999999965 57889999886543211 11122346889999999999999999999987654
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEccccCc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kL~DFGla 632 (772)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 689999999999999885 3456899999999999999999999998 999999999999987654 999999998
Q ss_pred cCCCC--------CCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCC--CHHHHHHHHhhcCCCCcc
Q 004129 633 NNTTA--------AKTGSAAMELLE---TSAVDLESNVYSFGTILFEMITGRISYSIENG--SLENWASEYLKGEQPLKD 699 (772)
Q Consensus 633 ~~~~~--------~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~--~~~~~~~~~~~~~~~~~~ 699 (772)
+.... ++..|+|||.+. ...++.++|||||||++|||+||+.||..... .+... ...+....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~-- 239 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ---ITSGKYNF-- 239 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHH---HHHTCCCC--
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHH---HHhCcccc--
Confidence 75432 456799999873 56789999999999999999999999964332 22221 11121110
Q ss_pred ccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 700 IVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 700 ~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
........+.++.+++.+||+.||++||++.|+++
T Consensus 240 -----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 -----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 01111234567899999999999999999999984
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=330.63 Aligned_cols=248 Identities=17% Similarity=0.308 Sum_probs=191.4
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
++.+.+|+|+||.||+|+... .+++|++....... ...+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~ 108 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIIT 108 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEEC
T ss_pred EEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEe
Confidence 677889999999999999764 48888876543221 12245788999999999999999999999876 679999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC----
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT---- 636 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~---- 636 (772)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999853 3346899999999999999999999998 99999999999998 6799999999865321
Q ss_pred ----------CCCccccchhhhcc---------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCC
Q 004129 637 ----------AAKTGSAAMELLET---------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPL 697 (772)
Q Consensus 637 ----------~~~~~~~apE~~~~---------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~ 697 (772)
.++..|+|||.+.. ..++.++|||||||++|||+||+.||... ...........+..+.
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~ 262 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMKPN 262 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCCCC
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCCCC
Confidence 23456899999853 45788999999999999999999999643 3333333333332111
Q ss_pred ccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCCC
Q 004129 698 KDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEPD 750 (772)
Q Consensus 698 ~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 750 (772)
... ...+.++.+++.+||+.||++|||+.|+++.|+++......
T Consensus 263 --~~~-------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 263 --LSQ-------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --CCC-------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --CCc-------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111 12335688999999999999999999999999998876543
No 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=321.16 Aligned_cols=247 Identities=16% Similarity=0.228 Sum_probs=185.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC-------
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED------- 551 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~------- 551 (772)
+++++.+|+|+||.||+|+.. +++.||+|++.... ....+++.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 367889999999999999976 48899999886442 23356789999999999999999999988432
Q ss_pred -----CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEE
Q 004129 552 -----EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAK 625 (772)
Q Consensus 552 -----~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~k 625 (772)
.....++||||++ |+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+|
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEE
T ss_pred cccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEE
Confidence 1125799999997 69999884 346899999999999999999999998 99999999999997 568999
Q ss_pred EccccCccCCCC------------CCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh
Q 004129 626 ISDFSFWNNTTA------------AKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK 692 (772)
Q Consensus 626 L~DFGla~~~~~------------~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~ 692 (772)
|+|||+++.... ++..|+|||.+.. ..++.++|||||||++|||+||+.||.... ..+.......
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~ 239 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--ELEQMQLILE 239 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 999999864321 2446899998754 678999999999999999999999996432 2222222222
Q ss_pred cCCCCcc-----------------ccCC--ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 693 GEQPLKD-----------------IVDP--TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 693 ~~~~~~~-----------------~~d~--~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
....... ...+ .+.......+.++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 2110000 0000 001112234678999999999999999999999986
No 223
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.7e-36 Score=335.02 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=188.4
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC----CCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~----~~~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++.... +.+.+|+++|++++|||||++++++... +..
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 367788999999999999975 58999999885432 1234799999999999999999988642 222
Q ss_pred eEEEEEecCCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC-CcEEEccccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED-YAAKISDFSF 631 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~-~~~kL~DFGl 631 (772)
..++||||+++ +|.+.+.. .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchh
Confidence 46799999975 66666542 23467999999999999999999999988 9999999999999965 6789999999
Q ss_pred ccCCC--------CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--c-------
Q 004129 632 WNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--G------- 693 (772)
Q Consensus 632 a~~~~--------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~------- 693 (772)
++... .++..|+|||.+.+. .++.++|||||||++|||++|+.||.... ..+.+..++. +
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~--~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHH
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHH
Confidence 86432 245579999998654 79999999999999999999999996433 2222222111 0
Q ss_pred ---CCCCccccCCcccc------ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhh
Q 004129 694 ---EQPLKDIVDPTLKS------FQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEIT 745 (772)
Q Consensus 694 ---~~~~~~~~d~~l~~------~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~ 745 (772)
.....+..-+.+.. +....+.++.+|+.+||+.||++||++.|+++. ++++.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00011111111111 122345789999999999999999999999863 44443
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.9e-35 Score=313.23 Aligned_cols=239 Identities=23% Similarity=0.328 Sum_probs=187.5
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC-------
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE------- 552 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~------- 552 (772)
++++.+|+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 67788999999999999964 7889999988532 223467999999999999999999999886531
Q ss_pred ----CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEcc
Q 004129 553 ----PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISD 628 (772)
Q Consensus 553 ----~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~D 628 (772)
....++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEee
Confidence 2257999999999999999964 3345788899999999999999999998 99999999999999999999999
Q ss_pred ccCccCCC-----------------------CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHH
Q 004129 629 FSFWNNTT-----------------------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLE 684 (772)
Q Consensus 629 FGla~~~~-----------------------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~ 684 (772)
||+++... .++..|+|||.+.+. .++.++|||||||++|||++ ||... .+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-~~~~ 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-MERV 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-HHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-hhHH
Confidence 99886432 134568999998754 78999999999999999998 44311 1122
Q ss_pred HHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 685 NWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 685 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.............. ..+....+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 236 NILKKLRSVSIEFP-------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHSTTCCCC-------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhccccccccC-------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222222211111 1122344567889999999999999999999986
No 225
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.4e-35 Score=325.84 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=191.1
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC---ce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+++++.+|+|+||.||+|+.. ++..||||++.... .....+.+.+|++++.+++||||+++++++..... ..
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE----HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT----CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc----CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 377889999999999999865 67889999886432 12344679999999999999999999999975431 25
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+. |+|.+++.. ..+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 799999997 699998853 45899999999999999999999998 999999999999999999999999987532
Q ss_pred C------------CCCccccchhhhc-cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC-HHHHHHHHhhcCCCCcccc
Q 004129 636 T------------AAKTGSAAMELLE-TSAVDLESNVYSFGTILFEMITGRISYSIENGS-LENWASEYLKGEQPLKDIV 701 (772)
Q Consensus 636 ~------------~~~~~~~apE~~~-~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~ 701 (772)
. .++..|+|||.+. ...++.++|||||||++|||+||+.||...... ....+...... +..+..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~ 256 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS--PSQEDL 256 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCS--CCHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCC--CCHHHH
Confidence 2 3456789999864 455899999999999999999999999643321 11111111110 000000
Q ss_pred ----------------CC---ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 702 ----------------DP---TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 ----------------d~---~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. ...........++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0011112345678999999999999999999999864
No 226
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.4e-35 Score=333.77 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=159.1
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC---ce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---FT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~~ 555 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... .....+++.+|+++|++++|||||++++++..... ..
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 377889999999999999964 578899998864321 13345689999999999999999999999976531 25
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+. |+|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 799999996 69999985 3456999999999999999999999998 999999999999999999999999998643
Q ss_pred C-------------------------------CCCccccchhhh-ccCCCCCCCcHHHHHHHHHHHHcCCCcc
Q 004129 636 T-------------------------------AAKTGSAAMELL-ETSAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 636 ~-------------------------------~~~~~~~apE~~-~~~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
. .++..|+|||.+ ....++.++||||+||++|||+||..||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2 235568999986 5667999999999999999999865544
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6e-36 Score=353.13 Aligned_cols=244 Identities=20% Similarity=0.335 Sum_probs=199.4
Q ss_pred cccccccccceEEEEEEEEcC----CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSS----GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTR 556 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~----~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~ 556 (772)
++.+.+|+|+||+||+|++.. +..+|+|+..... .....+.|.+|+.++++++|||||+++|++.++ ..
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~ 465 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PV 465 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ce
Confidence 677889999999999998743 4568888765432 233457899999999999999999999998543 35
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT 636 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~ 636 (772)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 899999999999999863 3346899999999999999999999988 9999999999999999999999999987543
Q ss_pred C----------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 637 A----------AKTGSAAMELLETSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ~----------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
. ++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...+.......+...
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~--------- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERL--------- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCC---------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCC---------
Confidence 2 2246999999998999999999999999999997 99999633 333444333333211
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhhh
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAKLKEITA 746 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~ 746 (772)
..+..++.++.+++.+||+.||++||++.|+++.|+++..
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1123345678899999999999999999999999998864
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.3e-36 Score=329.82 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=180.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC----c
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP----F 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~----~ 554 (772)
+++++.+|+|+||.||+|+. .+++.||||++..... .....+++.+|++++++++||||+++++++..... .
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788999999999999985 4688999998864321 12345678999999999999999999999875421 2
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 469999999 7899988853 56999999999999999999999988 99999999999999999999999999865
Q ss_pred CC------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCccccC----
Q 004129 635 TT------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIVD---- 702 (772)
Q Consensus 635 ~~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~d---- 702 (772)
.. .++..|+|||.+.+ ..++.++||||+||++|||+||+.||...+ ..+.+..+... ..+..+...
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 32 34567899999876 679999999999999999999999996432 22222222110 011000000
Q ss_pred ---------------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 703 ---------------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 703 ---------------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
............++.+|+.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00011112234678999999999999999999999864
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.3e-35 Score=310.07 Aligned_cols=241 Identities=21% Similarity=0.271 Sum_probs=194.3
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++++.+|+|+||+||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 24 y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 98 (287)
T 2wei_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (287)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEE
Confidence 478899999999999999975 6889999988654322 122467899999999999999999999998876 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC---CcEEEccccCccCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED---YAAKISDFSFWNNT 635 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~---~~~kL~DFGla~~~ 635 (772)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 9999999999998853 346899999999999999999999998 9999999999999754 57999999987643
Q ss_pred CC--------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccc
Q 004129 636 TA--------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKS 707 (772)
Q Consensus 636 ~~--------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 707 (772)
.. ++..|+|||.+.+ .++.++||||||+++|||+||+.||... +..+.......+..... .+
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~---~~---- 244 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFD---LP---- 244 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCC---SG----
T ss_pred cCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC---ch----
Confidence 32 2346899998865 4899999999999999999999999643 33444444444322111 01
Q ss_pred ccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 708 FQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 708 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....+.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11233467889999999999999999999987
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.6e-35 Score=326.39 Aligned_cols=248 Identities=17% Similarity=0.227 Sum_probs=191.3
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc----e
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF----T 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~----~ 555 (772)
.+.+.+|+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+.. .
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc---chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 66788999999999999864 688999998865332 233457889999999999999999999999875521 2
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+. |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 389999997 68887763 34899999999999999999999998 999999999999999999999999998643
Q ss_pred C------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhc-CCCCcccc------
Q 004129 636 T------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKG-EQPLKDIV------ 701 (772)
Q Consensus 636 ~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~------ 701 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+........ ..+..+..
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDK 272 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence 2 34567999999876 789999999999999999999999996432 22222222211 01100000
Q ss_pred -------------CCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 702 -------------DPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 702 -------------d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.............++.+|+.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 001111122345789999999999999999999999864
No 231
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.7e-36 Score=331.74 Aligned_cols=254 Identities=18% Similarity=0.264 Sum_probs=188.7
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCC----Cce
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDE----PFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~----~~~ 555 (772)
+++++.+|+|+||+||+|+...+..+|+|++..... ...+|+++++.++|||||++++++...+ ...
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 467888999999999999998787899998764321 1236999999999999999999986533 123
Q ss_pred EEEEEecCCCCChhhhhhh-hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCcc
Q 004129 556 RMMVFEYSPNGSLFEHLHI-QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~-~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL~DFGla~ 633 (772)
.++||||++++.+....+. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 6899999986544333221 23567999999999999999999999998 99999999999999 79999999999986
Q ss_pred CCC--------CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhh--cCCC------
Q 004129 634 NTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLK--GEQP------ 696 (772)
Q Consensus 634 ~~~--------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~--~~~~------ 696 (772)
... .++..|+|||.+.+. .++.++|||||||++|||++|+.||..... .+....+.. +...
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG--IDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHH
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHh
Confidence 432 235569999998654 589999999999999999999999964432 222222111 0000
Q ss_pred ---------CccccCCcc-ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhh
Q 004129 697 ---------LKDIVDPTL-KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITA 746 (772)
Q Consensus 697 ---------~~~~~d~~l-~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~ 746 (772)
...+..... ..+....+.++.+|+.+||+.||++|||+.|+++. ++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 000000000 01122355789999999999999999999999874 444433
No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.8e-35 Score=323.90 Aligned_cols=190 Identities=24% Similarity=0.230 Sum_probs=160.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CC-----cccceeEEEEcCCC
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HK-----NFVNLIGYCEEDEP 553 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-Hp-----NIV~l~g~~~~~~~ 553 (772)
++++.+|+|+||+||+|+.. +++.||||++... .....++..|++++..++ |+ +|+++++++...+
T Consensus 57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 67888999999999999965 6788999988632 223456778888888874 44 4999999998877
Q ss_pred ceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC--CCCcEEEccccC
Q 004129 554 FTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT--EDYAAKISDFSF 631 (772)
Q Consensus 554 ~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld--~~~~~kL~DFGl 631 (772)
..++||||++ |+|.+++.......+++..+..++.|++.||+|||.+..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 -~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 -HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp -EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred -ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 7899999996 699999976555679999999999999999999996444599999999999994 578899999999
Q ss_pred ccCC------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCC
Q 004129 632 WNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIE 679 (772)
Q Consensus 632 a~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~ 679 (772)
++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8643 23456799999999999999999999999999999999999643
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.3e-35 Score=314.77 Aligned_cols=240 Identities=21% Similarity=0.300 Sum_probs=191.1
Q ss_pred ccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC--CCcccceeEEEEcCCCceEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFTRM 557 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~~~ 557 (772)
+++++.+|+|+||.||+|+..+++.+|||++...... ....+.+.+|++++.+++ ||||+++++++...+ ..+
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~ 104 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIY 104 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEE
T ss_pred EEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc---ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEE
Confidence 3678899999999999999888999999998654322 334567999999999997 599999999998877 679
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCC-
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT- 636 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~- 636 (772)
+||| +.+|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++ +.+||+|||+++...
T Consensus 105 lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 568899999863 356899999999999999999999998 999999999999965 899999999986432
Q ss_pred ----------CCCccccchhhhcc-----------CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCC
Q 004129 637 ----------AAKTGSAAMELLET-----------SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQ 695 (772)
Q Consensus 637 ----------~~~~~~~apE~~~~-----------~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~ 695 (772)
.++..|+|||.+.. ..++.++|||||||++|||+||+.||........ ..........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 257 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHAIIDPNH 257 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHHHCTTS
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-HHHHHHhccc
Confidence 24567899999865 4788899999999999999999999964333222 2222222111
Q ss_pred CCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 696 PLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 696 ~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.. .++.....++.+++.+||+.||++||++.|+++.
T Consensus 258 ~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 EI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 10 1111224678899999999999999999999864
No 234
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.7e-35 Score=318.80 Aligned_cols=265 Identities=17% Similarity=0.238 Sum_probs=184.4
Q ss_pred HHHHHhhccccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEE
Q 004129 471 ELEAACEDFSNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCE 549 (772)
Q Consensus 471 el~~~~~~f~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~ 549 (772)
+.....++| ++.+.+|+|+||+||+|+.. ++..||||++...... ...+.+|++.+..++|||||++++++.
T Consensus 17 ~~~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~l~~l~h~niv~~~~~~~ 89 (360)
T 3e3p_A 17 RSRKEMDRF-QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFY 89 (360)
T ss_dssp HHHHHHTTE-EEC----------CEEEEETTTCCEEEEEEEECCTTC------CCHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred hchhhccce-EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc------cHHHHHHHHHHHhcCCCCcccHHHhhh
Confidence 344445555 77889999999999999974 6889999987543211 235677888899999999999999987
Q ss_pred cCCC-----ceEEEEEecCCCCChhhhhhh--hccCCCCHHHHHHHHHHHHHHHHHHh--cCCCCeEeeCCCCCCeEECC
Q 004129 550 EDEP-----FTRMMVFEYSPNGSLFEHLHI--QEAEHLDWAMRLRIAMGMAYCLEHMH--QLTPPIAHRNLQSSSIYLTE 620 (772)
Q Consensus 550 ~~~~-----~~~~LV~Ey~~~GsL~~~L~~--~~~~~l~~~~~~~Ia~~ia~gL~yLH--~~~~~IvHrDLKp~NILld~ 620 (772)
..+. ...++||||+++ +|...+.. .....+++..+..++.|++.||+||| +.+ |+||||||+|||++.
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNE 166 (360)
T ss_dssp EECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEET
T ss_pred ccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeC
Confidence 5331 136899999976 55554432 24456899999999999999999999 666 999999999999996
Q ss_pred -CCcEEEccccCccCCC--------CCCccccchhhhccC-CCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHH
Q 004129 621 -DYAAKISDFSFWNNTT--------AAKTGSAAMELLETS-AVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEY 690 (772)
Q Consensus 621 -~~~~kL~DFGla~~~~--------~~~~~~~apE~~~~~-~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~ 690 (772)
++.+||+|||+++... .++..|+|||.+.+. .++.++|||||||++|||+||+.||.... ........
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~~ 244 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN--SAGQLHEI 244 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH
T ss_pred CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC--hHHHHHHH
Confidence 8999999999986432 245579999998654 48999999999999999999999996433 22222222
Q ss_pred hhcC-CCCc-------------cccCCc-------cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhhhc
Q 004129 691 LKGE-QPLK-------------DIVDPT-------LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK--LKEITAM 747 (772)
Q Consensus 691 ~~~~-~~~~-------------~~~d~~-------l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 747 (772)
.... .+.. ...+.. ........+.++.+|+.+||+.||++|||+.|+++. ++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 2100 0000 000000 001112246789999999999999999999999875 5555443
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=320.66 Aligned_cols=248 Identities=17% Similarity=0.226 Sum_probs=192.6
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCc----e
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPF----T 555 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~----~ 555 (772)
.+.+.+|+|+||+||+|+.. +|+.||||++..... .....+++.+|+.++++++||||+++++++...+.. .
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred EEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56788999999999999964 688999998864322 233456789999999999999999999999875421 3
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCC
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~ 635 (772)
.++||||+. |+|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 489999997 68888773 34899999999999999999999998 999999999999999999999999998653
Q ss_pred C------CCCccccchhhhcc-CCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC-CC-----------
Q 004129 636 T------AAKTGSAAMELLET-SAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE-QP----------- 696 (772)
Q Consensus 636 ~------~~~~~~~apE~~~~-~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~-~~----------- 696 (772)
. .++..|+|||.+.+ ..++.++|||||||++|||+||+.||...+ ..+......... .+
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 2 34567899999876 678999999999999999999999996433 222222221110 00
Q ss_pred --------CccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 697 --------LKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 697 --------~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
......+.........+.++.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000111112223456789999999999999999999999864
No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.5e-35 Score=324.15 Aligned_cols=252 Identities=18% Similarity=0.283 Sum_probs=192.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-----------CCcccceeEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-----------HKNFVNLIGY 547 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-----------HpNIV~l~g~ 547 (772)
+++++.+|+|+||+||+|+. .+++.||||++... ....+.+.+|++++.+++ ||||++++++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 47788999999999999996 56889999988632 223457889999999886 8999999999
Q ss_pred EEcCC--CceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEEC-----
Q 004129 548 CEEDE--PFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLT----- 619 (772)
Q Consensus 548 ~~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld----- 619 (772)
+...+ ....++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+. + |+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETT
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccCCC
Confidence 87542 22579999999 89999999765556799999999999999999999997 8 99999999999994
Q ss_pred -CCCcEEEccccCccCC------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCC----HHHHHH
Q 004129 620 -EDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGS----LENWAS 688 (772)
Q Consensus 620 -~~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~----~~~~~~ 688 (772)
..+.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||...... ......
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 4458999999998633 23466799999999999999999999999999999999999743321 111111
Q ss_pred HHhh--cCCC-------------------CccccCC----------ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 004129 689 EYLK--GEQP-------------------LKDIVDP----------TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGI 737 (772)
Q Consensus 689 ~~~~--~~~~-------------------~~~~~d~----------~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~ev 737 (772)
.... +..+ ...+... ....++.....++.+|+.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 1111 0000 0000000 0012346778899999999999999999999999
Q ss_pred HHH
Q 004129 738 AAK 740 (772)
Q Consensus 738 l~~ 740 (772)
++.
T Consensus 332 l~h 334 (373)
T 1q8y_A 332 VNH 334 (373)
T ss_dssp HTC
T ss_pred hhC
Confidence 873
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.5e-35 Score=317.97 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=191.1
Q ss_pred ccccccccccceEEEEEEEEc-CC-cEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc------ccceeEEEEcC
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SG-VEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN------FVNLIGYCEED 551 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~-~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN------IV~l~g~~~~~ 551 (772)
+++++.+|+|+||+||+|+.. ++ ..||+|++... ....+.+.+|++++++++|++ ++.+++++...
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 478889999999999999964 34 68999987532 223467889999999998776 89999999887
Q ss_pred CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEE-------------
Q 004129 552 EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYL------------- 618 (772)
Q Consensus 552 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILl------------- 618 (772)
+ ..++||||+ +|+|.+++.......+++..+..|+.||+.||+|||+.+ |+||||||+|||+
T Consensus 95 ~--~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 G--HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp T--EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred C--eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecccccccccccc
Confidence 7 779999999 678888876555567999999999999999999999988 9999999999999
Q ss_pred ------CCCCcEEEccccCccCC------CCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCH-HH
Q 004129 619 ------TEDYAAKISDFSFWNNT------TAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSL-EN 685 (772)
Q Consensus 619 ------d~~~~~kL~DFGla~~~------~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~-~~ 685 (772)
+.++.+||+|||+++.. ..++..|+|||.+.+..++.++|||||||++|||+||+.||....... ..
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 249 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 56789999999998642 234567999999999999999999999999999999999996433211 11
Q ss_pred HHHHHhhcCCCCc--------cc-c------C--------------C--ccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 686 WASEYLKGEQPLK--------DI-V------D--------------P--TLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 686 ~~~~~~~~~~~~~--------~~-~------d--------------~--~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
.+.... +..+.. .. . + + ...........++.+|+.+||+.||++|||+
T Consensus 250 ~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 250 MMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 111111 111000 00 0 0 0 0001122345689999999999999999999
Q ss_pred HHHHH
Q 004129 735 RGIAA 739 (772)
Q Consensus 735 ~evl~ 739 (772)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
No 238
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=311.07 Aligned_cols=242 Identities=19% Similarity=0.284 Sum_probs=178.6
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++++.+|+|+||.||+|+.. +++.||||++...... ....+.+.++..+++.++||||+++++++...+ ..++|
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv 102 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK---EENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIA 102 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCH---HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEE
Confidence 67788999999999999975 6889999998654321 223344556666788899999999999999877 68999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccCCC--
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTT-- 636 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~-- 636 (772)
|||+ ++.+.. +.......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~e~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEK-LKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHH-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHH-HHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 444444 4334456799999999999999999999984 7 9999999999999999999999999875432
Q ss_pred ------CCCccccchhhhc-----cCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 637 ------AAKTGSAAMELLE-----TSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 637 ------~~~~~~~apE~~~-----~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
.++..|+|||.+. ...++.++|||||||++|||+||+.||..... ..+.......+..+.. +.
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~----~~- 252 (318)
T 2dyl_A 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-DFEVLTKVLQEEPPLL----PG- 252 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-HHHHHHHHHHSCCCCC----CS-
T ss_pred ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-cHHHHHHHhccCCCCC----Cc-
Confidence 3456789999984 56788999999999999999999999964332 3333444444322211 00
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
....+.++.+++.+||+.||++||++.|+++.
T Consensus 253 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 253 ---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234678899999999999999999999863
No 239
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.8e-35 Score=311.73 Aligned_cols=232 Identities=12% Similarity=0.113 Sum_probs=182.9
Q ss_pred ccccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEE
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
+++.+.+|+|+||.||+|+.. +++.||||++......+ ....+.|.+|++++.+++||||+++++++...+ ..++
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~l 108 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLV 108 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEE
Confidence 467889999999999999975 48899999987543322 334578999999999999999999999999877 6799
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCC
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAA 638 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~~ 638 (772)
||||+++|+|.+++.. . .......+|+.|++.||+|||+.+ |+||||||+|||+++++.+||+++|..
T Consensus 109 v~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~~~------ 176 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM------ 176 (286)
T ss_dssp EEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCCCC------
T ss_pred EEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecccc------
Confidence 9999999999999842 2 355578899999999999999998 999999999999999999999977642
Q ss_pred CccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc---ccccHHHHHH
Q 004129 639 KTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL---KSFQENVLEE 715 (772)
Q Consensus 639 ~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l---~~~~~~~~~~ 715 (772)
..++.++|||||||++|||+||+.||........ + ........... .......+++
T Consensus 177 ------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 177 ------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSG------L---APAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC------S---EECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh------h---HHHHHHhccCCCChhhcccCCCHH
Confidence 2378899999999999999999999964332100 0 00001111111 1122345678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHhhhhcCC
Q 004129 716 LLVVIKNCVHPDPKQRPSMRGIAAKLKEITAMEP 749 (772)
Q Consensus 716 l~~Li~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 749 (772)
+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 9999999999999999 99999999999876544
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.6e-36 Score=335.20 Aligned_cols=243 Identities=18% Similarity=0.272 Sum_probs=184.1
Q ss_pred hhccccccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCc
Q 004129 476 CEDFSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPF 554 (772)
Q Consensus 476 ~~~f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~ 554 (772)
..+++.+.+.+|+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++.+.+
T Consensus 13 l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-- 82 (434)
T 2rio_A 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESDDHPNVIRYYCSETTDR-- 82 (434)
T ss_dssp CSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--
T ss_pred hhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 344545556789999999987777789999999875421 24578899999987 8999999999998776
Q ss_pred eEEEEEecCCCCChhhhhhhhccC--C---CCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---------
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAE--H---LDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE--------- 620 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~--~---l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~--------- 620 (772)
..++||||+. |+|.+++...... . ..+..+..|+.||+.||+|||+.+ |+||||||+|||++.
T Consensus 83 ~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 83 FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCT
T ss_pred eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccc
Confidence 6899999995 7999998643221 1 133345789999999999999998 999999999999965
Q ss_pred ----CCcEEEccccCccCCC-------------CCCccccchhhhcc-------CCCCCCCcHHHHHHHHHHHHc-CCCc
Q 004129 621 ----DYAAKISDFSFWNNTT-------------AAKTGSAAMELLET-------SAVDLESNVYSFGTILFEMIT-GRIS 675 (772)
Q Consensus 621 ----~~~~kL~DFGla~~~~-------------~~~~~~~apE~~~~-------~~~s~ksDVwSfGvvL~ELlt-G~~P 675 (772)
++.+||+|||+++... .++..|+|||.+.+ ..++.++|||||||++|||+| |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 3589999999986432 24567999999865 678999999999999999999 9999
Q ss_pred ccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 676 YSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
|........ ....+....... ........+.++.+++.+||+.||++|||+.||++
T Consensus 240 f~~~~~~~~----~i~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 240 FGDKYSRES----NIIRGIFSLDEM----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TCSTTTHHH----HHHHTCCCCCCC----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCchhhHH----HHhcCCCCcccc----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 964332221 222222111111 01123466788999999999999999999999985
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.4e-35 Score=317.52 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=173.4
Q ss_pred cccccccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHH-HHhccCCCcccceeEEEEcCCCceEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKID-TLSKVNHKNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~-~L~~l~HpNIV~l~g~~~~~~~~~~~L 558 (772)
++++.+|+|+||.||+|+.. +++.||||++..... .....++..|+. +++.++||||+++++++...+ ..++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~l 98 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWI 98 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEE
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEE
Confidence 66788999999999999975 688999999865432 222345566665 777889999999999999876 6799
Q ss_pred EEecCCCCChhhhhhhh---ccCCCCHHHHHHHHHHHHHHHHHHhcC-CCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 559 VFEYSPNGSLFEHLHIQ---EAEHLDWAMRLRIAMGMAYCLEHMHQL-TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~---~~~~l~~~~~~~Ia~~ia~gL~yLH~~-~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
||||+++ +|.+++... ....+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999974 887777531 246789999999999999999999997 7 99999999999999999999999999864
Q ss_pred CC--------CCCccccchhhh----ccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccC
Q 004129 635 TT--------AAKTGSAAMELL----ETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVD 702 (772)
Q Consensus 635 ~~--------~~~~~~~apE~~----~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 702 (772)
.. .++..|+|||.+ .+..++.++|||||||++|||+||+.||....... +.......+. .
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~-------~ 247 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQLTQVVKGD-------P 247 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSC-------C
T ss_pred cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHHHHHhcCC-------C
Confidence 32 345578999998 46678999999999999999999999996432111 1111111110 0
Q ss_pred Cccc-cccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 703 PTLK-SFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 703 ~~l~-~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
+.+. ........++.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1111 111234567899999999999999999999976
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.3e-35 Score=319.49 Aligned_cols=242 Identities=17% Similarity=0.250 Sum_probs=168.2
Q ss_pred cccc-cccccceEEEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC--CCceE
Q 004129 481 NIIG-SFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED--EPFTR 556 (772)
Q Consensus 481 ~iig-~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~--~~~~~ 556 (772)
.+++ .+|+|+||+||+|+.. +++.||||++.... .. ..+....+..++||||+++++++... +....
T Consensus 31 ~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 31 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KA---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred EecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4545 4899999999999976 68899999885321 11 11222345667999999999998752 12247
Q ss_pred EEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCcc
Q 004129 557 MMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFWN 633 (772)
Q Consensus 557 ~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGla~ 633 (772)
++||||+++|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 99999999999999997655567999999999999999999999998 999999999999976 4569999999986
Q ss_pred CCC-------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHH--HHHHHHhhcCCCCccccCCc
Q 004129 634 NTT-------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLE--NWASEYLKGEQPLKDIVDPT 704 (772)
Q Consensus 634 ~~~-------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 704 (772)
... .++..|+|||.+....++.++|||||||++|||+||+.||........ ........+... ...+
T Consensus 180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~- 255 (336)
T 3fhr_A 180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG---FPNP- 255 (336)
T ss_dssp EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C---CCTT-
T ss_pred eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc---cCch-
Confidence 432 235578999999888899999999999999999999999964332111 000111000000 0000
Q ss_pred cccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 705 LKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 705 l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 256 ---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 256 ---EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ---hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112345678899999999999999999999974
No 243
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2e-34 Score=307.81 Aligned_cols=226 Identities=18% Similarity=0.302 Sum_probs=175.4
Q ss_pred ccc-ccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHH-hccCCCcccceeEEEEc--CCCce
Q 004129 481 NII-GSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTL-SKVNHKNFVNLIGYCEE--DEPFT 555 (772)
Q Consensus 481 ~ii-g~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L-~~l~HpNIV~l~g~~~~--~~~~~ 555 (772)
.++ +.+|+|+||.||+|+. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. .+...
T Consensus 20 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 20 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred hhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 444 5689999999999996 46889999987531 3567888887 55699999999999875 12225
Q ss_pred EEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECC---CCcEEEccccCc
Q 004129 556 RMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTE---DYAAKISDFSFW 632 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~---~~~~kL~DFGla 632 (772)
.++||||+++|+|.+++.......+++..+..|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 799999999999999997655567999999999999999999999998 999999999999998 789999999987
Q ss_pred cCCCCCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc---
Q 004129 633 NNTTAAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ--- 709 (772)
Q Consensus 633 ~~~~~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--- 709 (772)
.... +..++.++|||||||++|||+||+.||....... .. ......+.......+
T Consensus 168 ~~~~-------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------~~---~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 168 KETT-------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------IS---PGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp EECT-------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCCSSCHHH
T ss_pred cccc-------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------hh---HHHHHHHhhccccCCchh
Confidence 5432 3457789999999999999999999996432110 00 000111111111111
Q ss_pred -HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 710 -ENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 710 -~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 2346789999999999999999999999874
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.6e-35 Score=315.31 Aligned_cols=235 Identities=19% Similarity=0.357 Sum_probs=188.9
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhh-hHHHHHHHHHHHHhccC--CCcccceeEEEEcCCCce
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSK-NLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~-~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~~~ 555 (772)
+++.+.+|+|+||.||+|+. .+++.||||.+.......... ...+.+.+|++++++++ |+||+++++++...+ .
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~ 122 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--S 122 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--E
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--c
Confidence 47788999999999999985 468899999987543322100 11245778999999996 599999999999877 6
Q ss_pred EEEEEecCCC-CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccCcc
Q 004129 556 RMMVFEYSPN-GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSFWN 633 (772)
Q Consensus 556 ~~LV~Ey~~~-GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL~DFGla~ 633 (772)
.++||||+.+ ++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+||+|||+++
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 7999999976 899999864 356899999999999999999999988 99999999999999 78999999999876
Q ss_pred CCC-------CCCccccchhhhccCCC-CCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcc
Q 004129 634 NTT-------AAKTGSAAMELLETSAV-DLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTL 705 (772)
Q Consensus 634 ~~~-------~~~~~~~apE~~~~~~~-s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 705 (772)
... .++..|+|||.+.+..+ +.++|||||||++|||+||+.||.... + ...+...
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~----~~~~~~~--------- 261 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----E----IIRGQVF--------- 261 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----H----HHHCCCC---------
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----h----hhccccc---------
Confidence 432 34567999999877665 688999999999999999999995321 1 1122111
Q ss_pred ccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 706 KSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 706 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.....++++.+++.+||+.||++|||+.|+++
T Consensus 262 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 262 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11223467889999999999999999999976
No 245
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=315.59 Aligned_cols=236 Identities=22% Similarity=0.373 Sum_probs=184.3
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhh-hhHHHHHHHHHHHHhcc----CCCcccceeEEEEcCCC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWS-KNLESQFRKKIDTLSKV----NHKNFVNLIGYCEEDEP 553 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~-~~~~~~f~~Ei~~L~~l----~HpNIV~l~g~~~~~~~ 553 (772)
+++.+.+|+|+||.||+|+. .+++.||||++......... ......+.+|++++.++ +||||+++++++...+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~- 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE- 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC-
Confidence 47788899999999999986 46789999998654322111 11223467899999998 8999999999998776
Q ss_pred ceEEEEEec-CCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-CCCcEEEccccC
Q 004129 554 FTRMMVFEY-SPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-EDYAAKISDFSF 631 (772)
Q Consensus 554 ~~~~LV~Ey-~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-~~~~~kL~DFGl 631 (772)
..++|||| +.+++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||+
T Consensus 112 -~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 112 -GFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred -eEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEEcch
Confidence 56899999 789999999864 346899999999999999999999988 99999999999999 889999999998
Q ss_pred ccCCC-------CCCccccchhhhccCCCC-CCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCC
Q 004129 632 WNNTT-------AAKTGSAAMELLETSAVD-LESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDP 703 (772)
Q Consensus 632 a~~~~-------~~~~~~~apE~~~~~~~s-~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 703 (772)
++... .++..|+|||.+.+..+. .++|||||||++|||+||+.||... .+ .......
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~----~~~~~~~------- 251 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QE----ILEAELH------- 251 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----HHHTCCC-------
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HH----HhhhccC-------
Confidence 76432 245679999998776664 5899999999999999999999532 11 1111111
Q ss_pred ccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 004129 704 TLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAAK 740 (772)
Q Consensus 704 ~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~~ 740 (772)
++.....++.+++.+||+.||++||++.|+++.
T Consensus 252 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 252 ----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122344678899999999999999999999873
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=322.40 Aligned_cols=235 Identities=19% Similarity=0.261 Sum_probs=178.2
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
++.+.+|+|+||+||.....+++.||||++..... ..+.+|+++|+++ +|||||++++++.+.. ..++|
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv 96 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIA 96 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEE
Confidence 55677889999996655556789999998864322 1356899999999 8999999999998877 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEEC-----CCCcEEEccccCccC
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLT-----EDYAAKISDFSFWNN 634 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld-----~~~~~kL~DFGla~~ 634 (772)
|||+. |+|.+++.... ....+..+..|+.||+.||+|||+.+ |+||||||+|||++ ....+||+|||+++.
T Consensus 97 ~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 69999986432 23444556789999999999999998 99999999999994 334688999998764
Q ss_pred CC------------CCCccccchhhhc---cCCCCCCCcHHHHHHHHHHHHc-CCCcccCCCCCHHHHHHHHhhcCCCCc
Q 004129 635 TT------------AAKTGSAAMELLE---TSAVDLESNVYSFGTILFEMIT-GRISYSIENGSLENWASEYLKGEQPLK 698 (772)
Q Consensus 635 ~~------------~~~~~~~apE~~~---~~~~s~ksDVwSfGvvL~ELlt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 698 (772)
.. .++..|+|||.+. ...++.++|||||||++|||+| |+.||....... ... ..+.....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~-~~~~~~~~ 248 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANI-LLGACSLD 248 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHH-HTTCCCCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHH-HhccCCcc
Confidence 32 2566899999986 4677889999999999999999 999985332211 111 11111111
Q ss_pred cccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 004129 699 DIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIAA 739 (772)
Q Consensus 699 ~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl~ 739 (772)
.. .........+.+++.+||+.||++|||+.||++
T Consensus 249 -~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 -CL-----HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -TS-----CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cc-----CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11 112344566889999999999999999999984
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-33 Score=335.64 Aligned_cols=234 Identities=18% Similarity=0.269 Sum_probs=185.6
Q ss_pred ccccccccccceEEEEEEEEc--CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCC---c
Q 004129 480 SNIIGSFSDGTVGTVYKGTLS--SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEP---F 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~~--~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~---~ 554 (772)
+++++.+|+|+||+||+|+.. +++.||||++..... ......|.+|++++.+++|||||++++++...+. .
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD----AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC----HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 477889999999999999975 588999998764321 2345678999999999999999999999987552 1
Q ss_pred eEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
..++||||+++|+|.+++. ..++|..++.|+.||+.||+|||+.+ |+||||||+|||++.+ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccchh
Confidence 1599999999999998764 26999999999999999999999998 9999999999999986 899999999864
Q ss_pred CC-----CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCcccccc
Q 004129 635 TT-----AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQ 709 (772)
Q Consensus 635 ~~-----~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 709 (772)
.. .++..|+|||.+.+. ++.++|||||||++|||++|..||..... ..+. . ....
T Consensus 231 ~~~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~-------------~~~~----~--~~~~ 290 (681)
T 2pzi_A 231 INSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV-------------DGLP----E--DDPV 290 (681)
T ss_dssp TTCCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC-------------SSCC----T--TCHH
T ss_pred cccCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc-------------cccc----c--cccc
Confidence 33 356789999998765 48999999999999999999988752110 0000 0 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhh
Q 004129 710 ENVLEELLVVIKNCVHPDPKQRP-SMRGIAAKLKEI 744 (772)
Q Consensus 710 ~~~~~~l~~Li~~Cl~~dP~~RP-s~~evl~~L~~i 744 (772)
......+.+++.+||+.||++|| +++++...|..+
T Consensus 291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 23446788999999999999999 566677766654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.7e-34 Score=317.13 Aligned_cols=235 Identities=12% Similarity=0.143 Sum_probs=171.3
Q ss_pred cccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCC-Ccccce---------eEE--
Q 004129 481 NIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH-KNFVNL---------IGY-- 547 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H-pNIV~l---------~g~-- 547 (772)
...+.+|+|+||+||+|+. .+++.||||++....... ....+.|.+|+.+++.++| +|.... ...
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 3456788999999999995 578999999876433222 2224679999999999987 322111 111
Q ss_pred ----------EEcCC---CceEEEEEecCCCCChhhhhhh-----hccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEee
Q 004129 548 ----------CEEDE---PFTRMMVFEYSPNGSLFEHLHI-----QEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHR 609 (772)
Q Consensus 548 ----------~~~~~---~~~~~LV~Ey~~~GsL~~~L~~-----~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHr 609 (772)
+.... ....+++|+++ +|+|.+++.. .....+++..++.|+.|+++||+|||+.+ |+||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHr 235 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHT 235 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECS
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccC
Confidence 11111 12346777766 6899998842 22345788899999999999999999988 9999
Q ss_pred CCCCCCeEECCCCcEEEccccCccCC------CCCCccccchhhh----------ccCCCCCCCcHHHHHHHHHHHHcCC
Q 004129 610 NLQSSSIYLTEDYAAKISDFSFWNNT------TAAKTGSAAMELL----------ETSAVDLESNVYSFGTILFEMITGR 673 (772)
Q Consensus 610 DLKp~NILld~~~~~kL~DFGla~~~------~~~~~~~~apE~~----------~~~~~s~ksDVwSfGvvL~ELltG~ 673 (772)
||||+|||++.++.+||+|||+++.. ..+ ..|+|||.+ ....++.++|||||||++|||+||+
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~ 314 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred CcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999997532 234 789999998 5556888999999999999999999
Q ss_pred CcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 004129 674 ISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRGIA 738 (772)
Q Consensus 674 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~evl 738 (772)
.||...... .....++.. ....++++.+++.+||+.||++||++.|++
T Consensus 315 ~Pf~~~~~~------------~~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 315 LPNTDDAAL------------GGSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CCCCTTGGG------------SCSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCCCCcchh------------hhHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999643210 111111110 012346789999999999999999977764
No 249
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.1e-34 Score=332.13 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=194.5
Q ss_pred ccccccccccceEEEEEEEE-cCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEcC----CCc
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEED----EPF 554 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~----~~~ 554 (772)
+++.+.+|.|+||+||+|.. .++..||||++.... .....+.+.+|++++++++|||||++++++... ...
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL----SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC----CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 37888999999999999986 468899999875432 233456799999999999999999999987651 122
Q ss_pred eEEEEEecCCCCChhhhhhhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCc---EEEcccc
Q 004129 555 TRMMVFEYSPNGSLFEHLHIQE-AEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYA---AKISDFS 630 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL~~~L~~~~-~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~---~kL~DFG 630 (772)
..++||||+++|+|.+++.... ...+++..+..|+.|++.||+|||+.+ |+||||||+||+++.++. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 4689999999999999986432 236889999999999999999999988 999999999999986654 9999999
Q ss_pred CccCCC--------CCCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcccCCCCCHHHHHHHHhhcC---CCCcc
Q 004129 631 FWNNTT--------AAKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISYSIENGSLENWASEYLKGE---QPLKD 699 (772)
Q Consensus 631 la~~~~--------~~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~~~~~~~~~~~~~~~~~~~---~~~~~ 699 (772)
+++... .++..|+|||.+.+..++.++|||||||++|||+||+.||.... ....|........ ....+
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-QPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-HHHHSSTTCC------CCSCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-chhhhhhhhhcccchhhhhhh
Confidence 986532 24567899999999999999999999999999999999996431 1111111000000 00000
Q ss_pred ccC---------CccccccHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHhhhhc
Q 004129 700 IVD---------PTLKSFQENVLEELLVVIKNCVHPDPKQRPSMRG-----IAAKLKEITAM 747 (772)
Q Consensus 700 ~~d---------~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-----vl~~L~~i~~~ 747 (772)
... +.........+.++.+++.+||..||++|||+.| ..+.++++...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 1111234557788999999999999999999988 44555555443
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=1.6e-33 Score=305.85 Aligned_cols=241 Identities=13% Similarity=0.136 Sum_probs=178.7
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhccC---------CCcccceeEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVN---------HKNFVNLIGYC 548 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~---------HpNIV~l~g~~ 548 (772)
++++.+|+|+||+||+|+. +++.||||++....... ......+.+.+|++++++++ |||||++++++
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 6778899999999999998 68999999997654210 11222357888999888885 77777777654
Q ss_pred EcC----------------------------CCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh
Q 004129 549 EED----------------------------EPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH 600 (772)
Q Consensus 549 ~~~----------------------------~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH 600 (772)
... +....++||||+++|++.+.+.. ..+++..+..|+.||+.||+|||
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 310 02268999999999987777632 56899999999999999999999
Q ss_pred -cCCCCeEeeCCCCCCeEECCCC--------------------cEEEccccCccCCC----CCCccccchhhhccCCCCC
Q 004129 601 -QLTPPIAHRNLQSSSIYLTEDY--------------------AAKISDFSFWNNTT----AAKTGSAAMELLETSAVDL 655 (772)
Q Consensus 601 -~~~~~IvHrDLKp~NILld~~~--------------------~~kL~DFGla~~~~----~~~~~~~apE~~~~~~~s~ 655 (772)
+.+ |+||||||+|||++.++ .+||+|||+++... .++..|+|||.+.+.. +.
T Consensus 179 ~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~ 255 (336)
T 2vuw_A 179 ASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DY 255 (336)
T ss_dssp HHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SH
T ss_pred HhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-cc
Confidence 888 99999999999999887 99999999987543 3567899999998665 88
Q ss_pred CCcHHHHHHH-HHHHHcCCCcccCCCCCHHHHHHHHhhcCCCCccccCCccccccHHHHHHHHHHHHHcccCCCCCCCCH
Q 004129 656 ESNVYSFGTI-LFEMITGRISYSIENGSLENWASEYLKGEQPLKDIVDPTLKSFQENVLEELLVVIKNCVHPDPKQRPSM 734 (772)
Q Consensus 656 ksDVwSfGvv-L~ELltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 734 (772)
++||||+|++ .+++++|..||.... ............ .... ...........++++.+|+.+||+.| |+
T Consensus 256 ~~Diwsl~~~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~-~~~~---~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 256 QFDIYRLMKKENNNRWGEYHPYSNVL-WLHYLTDKMLKQ-MTFK---TKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp HHHHHHHHHHHHTTCTTSCCTHHHHH-HHHHHHHHHHHT-CCCS---SCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred ceehhhhhCCCCcccccccCCCcchh-hhhHHHHhhhhh-hccC---cccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 9999998777 788889999984210 000111111111 1111 11112234567889999999999976 89
Q ss_pred HHHH
Q 004129 735 RGIA 738 (772)
Q Consensus 735 ~evl 738 (772)
.|++
T Consensus 326 ~e~l 329 (336)
T 2vuw_A 326 TDLL 329 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=6.9e-27 Score=271.00 Aligned_cols=180 Identities=13% Similarity=0.089 Sum_probs=124.9
Q ss_pred cccceEEEEEEE-EcCCcEEEEEEeeecccc-----hhhhhHHHHHHHHHHHHhcc-CCCcccceeEEEEcCCCceEEEE
Q 004129 487 SDGTVGTVYKGT-LSSGVEIAVTSTSVKSRA-----DWSKNLESQFRKKIDTLSKV-NHKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 487 g~G~fg~Vykg~-~~~~~~vaVK~~~~~~~~-----~~~~~~~~~f~~Ei~~L~~l-~HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+.|+.|.+++++ .-.|..++||.+...... ...+...++|.+|+++|+++ .|+||+++++++++++ ..|||
T Consensus 243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~yLV 320 (569)
T 4azs_A 243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SGWLV 320 (569)
T ss_dssp C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EEEEE
T ss_pred ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EEEEE
Confidence 345555555544 335788999988654211 12234456799999999999 7999999999999887 78999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC--
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA-- 637 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~-- 637 (772)
|||++||+|.++|.. ...++.. +|+.||+.||+|+|+++ ||||||||+||||++++++||+|||+++....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999953 3456653 58999999999999999 99999999999999999999999999875433
Q ss_pred -------CCccccchhhhccCCCCCCCcHHHHHHHHHHHHcCCCcc
Q 004129 638 -------AKTGSAAMELLETSAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 638 -------~~~~~~apE~~~~~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
++..|+|||.+.+ .+..++|+||+|++++++.++..++
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3457899999865 5678899999999999887765443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.4e-24 Score=248.32 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=139.7
Q ss_pred ccccccceEEEEEEEEcCCcEEEEEEeeecccch---hhhhHHHHHHHHHHHHhccCCCcccceeEEEEcCCCceEEEEE
Q 004129 484 GSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRAD---WSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~---~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~~~~~~~~LV~ 560 (772)
+.+|+|+||+||+|+. .+..+++|+...+.... ......++|.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 4678999999999954 46778888765543221 11223466899999999999999997766666655 349999
Q ss_pred ecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCC---
Q 004129 561 EYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTA--- 637 (772)
Q Consensus 561 Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~--- 637 (772)
||+++|+|.+++.. +..|+.|+++||+|||+++ |+||||||+|||+++ ++||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999853 5689999999999999998 999999999999999 999999999875443
Q ss_pred -------------CCccccchhhhcc--CCCCCCCcHHHHHHHHHHHHcCCCcc
Q 004129 638 -------------AKTGSAAMELLET--SAVDLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 638 -------------~~~~~~apE~~~~--~~~s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
++..|+|||.+.. ..|+.++|+||..+-.+|.+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3457899999876 66888899999999999998887776
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=3.1e-23 Score=222.76 Aligned_cols=160 Identities=27% Similarity=0.459 Sum_probs=148.5
Q ss_pred cCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCc--eeeEEeCC----CcEEEEEecCCCCcc--cCchhhc
Q 004129 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCS--WFGVECSD----GKVVILNLRDLCLGG--MLAPELG 190 (772)
Q Consensus 119 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~--w~Gv~C~~----~~v~~l~L~~~~l~G--~ip~~l~ 190 (772)
.|.++|+.||++||+++. ||. .+.+|+.+ .+||. |.||+|+. ++|+.|+|++++++| .+|+.++
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~ 73 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLPT------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLA 73 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCTT------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGG
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCCC------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHh
Confidence 488899999999999984 565 78999643 47998 99999974 799999999999999 9999999
Q ss_pred CCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCE
Q 004129 191 QLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISE 269 (772)
Q Consensus 191 ~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~ 269 (772)
++++|++|+|++ |++.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|.++|.+|..+..+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 999999999995 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCccccccc
Q 004129 270 IQVDESWLTNAASRASC 286 (772)
Q Consensus 270 l~l~~N~l~g~~p~~~~ 286 (772)
|+|++|.++|.+|....
T Consensus 154 L~L~~N~l~~~~p~~l~ 170 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYG 170 (313)
T ss_dssp EECCSSCCEEECCGGGG
T ss_pred EECcCCcccCcCCHHHh
Confidence 99999999999987543
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1.2e-21 Score=207.10 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=124.1
Q ss_pred cccccccccccceEEEEEEEEcCCcEEEEEEeeecccc-------------hhhhhHHHHHHHHHHHHhccCCCccccee
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA-------------DWSKNLESQFRKKIDTLSKVNHKNFVNLI 545 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~-------------~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~ 545 (772)
++.+.+.+|.|+||.||+|+..+|+.||+|.+...... .|.......+.+|++++++++ | ++++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 34567889999999999999977999999998643211 011123567999999999999 5 7777
Q ss_pred EEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCCCcEE
Q 004129 546 GYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTEDYAAK 625 (772)
Q Consensus 546 g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~~~~k 625 (772)
+++..+ ..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+|
T Consensus 168 ~~~~~~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 168 KVYAWE---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp CEEEEE---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEE
T ss_pred eEEecc---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEE
Confidence 766543 3489999999999988 421 123469999999999999998 99999999999999 99999
Q ss_pred EccccCccCCCCCCccccchhhhcc----------CCCCCCCcHHH
Q 004129 626 ISDFSFWNNTTAAKTGSAAMELLET----------SAVDLESNVYS 661 (772)
Q Consensus 626 L~DFGla~~~~~~~~~~~apE~~~~----------~~~s~ksDVwS 661 (772)
|+|||+++.. ..+.|||.+.. .+|..++|+|.
T Consensus 233 l~DFG~a~~~----~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 233 IIDFPQSVEV----GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp ECCCTTCEET----TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEECCCCeEC----CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999998754 34678887632 44556667764
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.5e-21 Score=235.12 Aligned_cols=159 Identities=23% Similarity=0.299 Sum_probs=119.0
Q ss_pred hccCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeCCCcEEEEEecCCCCccc---Cch------
Q 004129 117 LARCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECSDGKVVILNLRDLCLGGM---LAP------ 187 (772)
Q Consensus 117 ~~~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~~~~v~~l~L~~~~l~G~---ip~------ 187 (772)
+.++.++|+.||++||+++. ||. .+++|+.. .+||+|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~------~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWSSN------KNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTT------SCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCC------CCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccC
Confidence 34456789999999999996 777 89999732 47999999999989999999999999998 665
Q ss_pred -----------------hhcCCCCCCEEEcccCcCcccCch--hhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEEE
Q 004129 188 -----------------ELGQLSELKSIILRNNSFFGTIPK--EIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTLL 247 (772)
Q Consensus 188 -----------------~l~~l~~L~~L~L~~N~l~G~iP~--~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L~ 247 (772)
.++.+++|++|+|++|.++|.+|. .+++|++|++|||++|.++|.+|..+ +++++|++|+
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 455667777777777777777776 67777777777777777777777665 6677777777
Q ss_pred CccCCCcccCChh---hcCCCCCCEEEcCCCCCCCcccc
Q 004129 248 LDNNQYLGGISPE---LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~---~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++|+++|.+|.. +.++++|++|++++|.++|.+|.
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc
Confidence 7777777766655 55666666666666666655543
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=8.1e-21 Score=229.01 Aligned_cols=157 Identities=22% Similarity=0.271 Sum_probs=141.0
Q ss_pred ChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCC--Cce------------eeEEeC-CCcEEEEEecCCCCcccC
Q 004129 121 LNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNP--CSW------------FGVECS-DGKVVILNLRDLCLGGML 185 (772)
Q Consensus 121 ~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~--C~w------------~Gv~C~-~~~v~~l~L~~~~l~G~i 185 (772)
..+|+.||++||+++. +| +|+.+++| ...+| |.| .||+|+ .++|+.|+|++++|+|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCc-ccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 4579999999999984 44 89765432 12355 999 999998 589999999999999999
Q ss_pred chhhcCCCCCCEEEc-ccCcCccc--------------------------------------------------------
Q 004129 186 APELGQLSELKSIIL-RNNSFFGT-------------------------------------------------------- 208 (772)
Q Consensus 186 p~~l~~l~~L~~L~L-~~N~l~G~-------------------------------------------------------- 208 (772)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88877666
Q ss_pred --------------------CchhhcCCCCCCEeeccCCcCcc-----------------cCCcccC--CCCCCCEEECc
Q 004129 209 --------------------IPKEIGELKELEILDLGFNNFSG-----------------PFPSDFG--NSFSLTTLLLD 249 (772)
Q Consensus 209 --------------------iP~~l~~l~~L~~L~ls~N~l~G-----------------~iP~~l~--~l~~L~~L~l~ 249 (772)
||..++++++|++|+|++|+|+| .||..++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 89999999999999999999999 4999998 99999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCC-CCC-ccccc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESW-LTN-AASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~-l~g-~~p~~ 284 (772)
+|++.|.+|..++++++|+.|+|++|. ++| .+|..
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~ 536 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHH
Confidence 999999999999999999999999998 999 88863
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.82 E-value=1.3e-20 Score=222.04 Aligned_cols=156 Identities=21% Similarity=0.281 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHHhccCCCCC-------CCCCCCCCCCCCCCCCCCce---eeEEeC-CCcEEEEEecCCCCcccCchhhc
Q 004129 122 NSEGMALLRFRERVVRDPFG-------ALSKWSDNDGVGDNVNPCSW---FGVECS-DGKVVILNLRDLCLGGMLAPELG 190 (772)
Q Consensus 122 ~~~~~aLl~~k~~~~~~~~~-------~l~~W~~~~~~~~~~~~C~w---~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~ 190 (772)
..|+.||.+++.++..+.-. ...+|+ .+.+||.| .||+|+ .++|+.|+|++++++|.+|++++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHh
Confidence 46999999999987532100 122454 34689999 999997 47999999999999999999999
Q ss_pred CCCCCCEEEcccC-------------------------------------------------------------------
Q 004129 191 QLSELKSIILRNN------------------------------------------------------------------- 203 (772)
Q Consensus 191 ~l~~L~~L~L~~N------------------------------------------------------------------- 203 (772)
+|++|++|+|++|
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 9999999999988
Q ss_pred -----------cCcccCchhhcCCCCCCEeeccCCcCccc-----------------CCcccC--CCCCCCEEECccCCC
Q 004129 204 -----------SFFGTIPKEIGELKELEILDLGFNNFSGP-----------------FPSDFG--NSFSLTTLLLDNNQY 253 (772)
Q Consensus 204 -----------~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-----------------iP~~l~--~l~~L~~L~l~~N~~ 253 (772)
+++| ||..++++++|++|+|++|.|+|. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 4456 999999999999999999999997 999999 999999999999999
Q ss_pred cccCChhhcCCCCCCEEEcCCCC-CCC-ccccc
Q 004129 254 LGGISPELHVLKVISEIQVDESW-LTN-AASRA 284 (772)
Q Consensus 254 ~G~iP~~~~~l~~L~~l~l~~N~-l~g-~~p~~ 284 (772)
.|.+|..++++++|+.|+|++|. ++| .+|..
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~ 294 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDD 294 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHH
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHH
Confidence 99999999999999999999998 999 88874
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.75 E-value=6.3e-19 Score=190.48 Aligned_cols=160 Identities=17% Similarity=0.224 Sum_probs=141.2
Q ss_pred cCChHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeEEeC----------CCcEEEEEecCCCCcccCchh
Q 004129 119 RCLNSEGMALLRFRERVVRDPFGALSKWSDNDGVGDNVNPCSWFGVECS----------DGKVVILNLRDLCLGGMLAPE 188 (772)
Q Consensus 119 ~~~~~~~~aLl~~k~~~~~~~~~~l~~W~~~~~~~~~~~~C~w~Gv~C~----------~~~v~~l~L~~~~l~G~ip~~ 188 (772)
.+..+|+.||++||..+..|+.+.+++|.... ....++|.|.|+.|. ..+|+.|+|++|.+. .+|+.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~--~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN--SNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT--TTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc--cccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 35678999999999988777777778884211 113578999999995 268999999999998 89999
Q ss_pred hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcC-----
Q 004129 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHV----- 263 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~----- 263 (772)
++.+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|++.|.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 99999999999999999999999 89999999999999999999999999998765
Q ss_pred ----CCCCCEEEcCCCCCCCccccc
Q 004129 264 ----LKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 264 ----l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+++|+.|+|++|.++ .+|..
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGG
T ss_pred hhccCCCCCEEECcCCCcC-cchHh
Confidence 999999999999999 77764
No 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=5.8e-18 Score=176.51 Aligned_cols=143 Identities=13% Similarity=0.096 Sum_probs=105.0
Q ss_pred ccccccccccceEEEEEEEE-cCCcE--EEEEEeeecccchh-------------------hhhHHHHHHHHHHHHhccC
Q 004129 480 SNIIGSFSDGTVGTVYKGTL-SSGVE--IAVTSTSVKSRADW-------------------SKNLESQFRKKIDTLSKVN 537 (772)
Q Consensus 480 ~~iig~lg~G~fg~Vykg~~-~~~~~--vaVK~~~~~~~~~~-------------------~~~~~~~f~~Ei~~L~~l~ 537 (772)
+++.+.+|.|+||.||+|.. .+|.. ||||++........ .......+.+|+++|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999997 68888 99998654311100 1122346889999999999
Q ss_pred CCcccceeEEEEcCCCceEEEEEecCCC-C----ChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHh-cCCCCeEeeCC
Q 004129 538 HKNFVNLIGYCEEDEPFTRMMVFEYSPN-G----SLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMH-QLTPPIAHRNL 611 (772)
Q Consensus 538 HpNIV~l~g~~~~~~~~~~~LV~Ey~~~-G----sL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH-~~~~~IvHrDL 611 (772)
|+++....-+... ..+|||||+.+ | +|.++... .++.....++.|++.||+||| +++ |+||||
T Consensus 129 ~~~i~~p~~~~~~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTYM----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE--LVHADL 197 (258)
T ss_dssp HTTCCCCCEEEEE----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred hCCCCCCeEEEcC----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence 8865322222222 24899999942 4 55554321 123456789999999999999 888 999999
Q ss_pred CCCCeEECCCCcEEEccccCccCC
Q 004129 612 QSSSIYLTEDYAAKISDFSFWNNT 635 (772)
Q Consensus 612 Kp~NILld~~~~~kL~DFGla~~~ 635 (772)
||+|||+++ .++|+|||++...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999998654
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.59 E-value=3.5e-15 Score=148.13 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=114.8
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004129 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|+.+.|++. .++.|+|++|.+++..+. .+..+++|++|+|++|.+++.+|..+.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999632 678999999999886665 389999999999999999999999999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++++..|..++++++|++|+|++|++++.+|..+..+++|+.|+|++|.|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999998888899999999999999999999999999999999999999999987664
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=1.1e-14 Score=148.74 Aligned_cols=125 Identities=22% Similarity=0.286 Sum_probs=111.2
Q ss_pred CCCCceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeec
Q 004129 156 VNPCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224 (772)
Q Consensus 156 ~~~C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~l 224 (772)
...|+|++|.|++ ..++.|+|++|.+++..|..+..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4579999999973 25789999999999988889999999999999999996544456789999999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004129 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|++++-.+..+..+++|++|+|++|+++ .||..+..+++|+.|+|++|.+++-.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 999999766666899999999999999998 89999999999999999999999643
No 262
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=3.4e-15 Score=162.62 Aligned_cols=142 Identities=8% Similarity=0.072 Sum_probs=99.9
Q ss_pred cccccccccccceEEEEEEEEcCCcEEEEEEeeecccc--------h---------hhhhHHHHHHHHHHHHhccCCCcc
Q 004129 479 FSNIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRA--------D---------WSKNLESQFRKKIDTLSKVNHKNF 541 (772)
Q Consensus 479 f~~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~--------~---------~~~~~~~~f~~Ei~~L~~l~HpNI 541 (772)
.+.+.+.+|.|+||.||+|...+|+.||||+++..... + +....+-...+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45788999999999999999999999999986532110 0 000011112456677777755443
Q ss_pred cceeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCeEECCC
Q 004129 542 VNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSIYLTED 621 (772)
Q Consensus 542 V~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NILld~~ 621 (772)
....-+.... .+|||||+++++|..+... .....++.|++.+|.|||+++ ||||||||.|||++++
T Consensus 176 ~vp~p~~~~~----~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQSR----HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEEET----TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEE
T ss_pred CCCeeeeccC----ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCC
Confidence 3222222222 2799999999888765421 123467899999999999998 9999999999999877
Q ss_pred C----------cEEEccccCccC
Q 004129 622 Y----------AAKISDFSFWNN 634 (772)
Q Consensus 622 ~----------~~kL~DFGla~~ 634 (772)
+ .+.|+||+-+-.
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCcccccccccceEEEEeCCccc
Confidence 6 389999996543
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.54 E-value=2.8e-15 Score=180.30 Aligned_cols=111 Identities=29% Similarity=0.472 Sum_probs=106.0
Q ss_pred EEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCC
Q 004129 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQY 253 (772)
Q Consensus 174 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~ 253 (772)
+++..+.++|.+|+.++.++.|++|||++|.++|.||.+++++++|+.|||++|+++|.||..++++++|+.|||++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 34556888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 254 LGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 254 ~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+|.||..++.++.|++|+|++|.|+|.||..
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 9999999999999999999999999999974
No 264
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=3.4e-14 Score=138.72 Aligned_cols=125 Identities=21% Similarity=0.215 Sum_probs=108.5
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+++.|++ ..++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..++.+++|+.|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 7899999963 25789999999999766666799999999999999999766666899999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.+++..|..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99987666789999999999999999854444468899999999999999998764
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.48 E-value=1.3e-13 Score=138.18 Aligned_cols=124 Identities=20% Similarity=0.255 Sum_probs=107.9
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|.+|.|+. .+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 7899999963 25889999999999766666889999999999999999665666789999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.+++..+..++++++|++|+|++|++++-.+..+..+++|+.|+|++|.+++-.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCH
Confidence 9997666668999999999999999997666668999999999999999996443
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.48 E-value=2.2e-14 Score=153.60 Aligned_cols=118 Identities=20% Similarity=0.386 Sum_probs=111.5
Q ss_pred CcEEEEEecC-CCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRD-LCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~-~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..++.|+|++ |.+.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|.++|.+|..++++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 3578899995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCcccCChhhcCCC-CCCEEEcCCCCCCCccccccc
Q 004129 248 LDNNQYLGGISPELHVLK-VISEIQVDESWLTNAASRASC 286 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~-~L~~l~l~~N~l~g~~p~~~~ 286 (772)
|++|.++|.+|..++.+. +|+.|+|++|.++|.+|....
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~ 195 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGG
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHh
Confidence 999999999999999998 999999999999998887533
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.48 E-value=1.1e-13 Score=140.47 Aligned_cols=125 Identities=19% Similarity=0.168 Sum_probs=111.9
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004129 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|..+.|++. .++.|+|++|.+++..+. .+..+++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 78999999632 467899999999987664 478999999999999999988888899999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|.+++..|..+.++++|++|+|++|.+++-.|..+..+.+|+.|+|++|.+++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 999988787899999999999999999999899999999999999999999987664
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.47 E-value=1.7e-13 Score=138.98 Aligned_cols=124 Identities=23% Similarity=0.226 Sum_probs=111.4
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|..|.|.+ ..++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 7899999963 25789999999999877778999999999999999999988999999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.+++-.+..+.++++|++|+|++|.+++-.|..+..+++|+.|+|++|.+++-.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 9995444446899999999999999999989999999999999999999997544
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.44 E-value=2e-13 Score=141.15 Aligned_cols=110 Identities=21% Similarity=0.199 Sum_probs=71.2
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004129 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 45666666666666555666666677777777766666565666666677777777766655555566666677777766
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 251 NQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
|++++-.|..+..+.+|+.|+|++|.+++-
T Consensus 117 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 666644444456666667777766666643
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.44 E-value=2.6e-13 Score=146.32 Aligned_cols=114 Identities=22% Similarity=0.270 Sum_probs=86.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.++ .+|..++.+++|++|+|++|.+++ +|+.++.+++|++|+|++|++.|.+|..++++++|++|+|
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 35667777777777 677777777777777777777774 6666777777777777777777777777777777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++|++.|.+|..+..+++|+.|+|++|.+.|.+|..
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~ 296 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH
Confidence 777777777777777777777777777777777764
No 271
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.42 E-value=5.2e-13 Score=132.51 Aligned_cols=122 Identities=23% Similarity=0.224 Sum_probs=103.7
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|.|..+.|++ ..++.|+|++|.++ .+|..+..+++|++|+|++|.+++..|..+.++++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6788888863 25778999999987 68888999999999999999999877778899999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
.+++..|..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|.++...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999877778899999999999999988654556788999999999999887643
No 272
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.42 E-value=5.3e-13 Score=135.34 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=107.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 47889999999999987778999999999999999999888888999999999999999999999999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999998765
No 273
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.41 E-value=1.2e-13 Score=164.51 Aligned_cols=107 Identities=23% Similarity=0.356 Sum_probs=60.0
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004129 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.|+|++|.+. .||+.++.|++|++|+|++|.|+ .||..+++|++|++|||++|.|+ .||..++++++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 3444444444 45555555555555555555555 55555555555555555555555 555555555555555555555
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 253 YLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++ .||..++.+++|+.|+|++|.|+|.+|.
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 53 5555555555555555555555555544
No 274
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.37 E-value=3e-13 Score=128.01 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=101.7
Q ss_pred CcEEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.++ |.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45779999999998 89999899999999999999999976 7789999999999999999999998888899999999
Q ss_pred CccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 248 LDNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|.+++ ..|..+..+++|+.|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999988 456889999999999999999987543
No 275
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.37 E-value=5e-13 Score=154.01 Aligned_cols=125 Identities=24% Similarity=0.251 Sum_probs=113.7
Q ss_pred CCceeeEEeCC-------------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeec
Q 004129 158 PCSWFGVECSD-------------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDL 224 (772)
Q Consensus 158 ~C~w~Gv~C~~-------------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~l 224 (772)
.|.|.|+ |+. ..++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..++++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 852 26889999999999988889999999999999999999988899999999999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|+.|++++|.+.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 9999998877779999999999999999987 6788899999999999999998777774
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.36 E-value=9.8e-13 Score=147.83 Aligned_cols=128 Identities=17% Similarity=0.256 Sum_probs=115.0
Q ss_pred CCCceee--EEeCC----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEee
Q 004129 157 NPCSWFG--VECSD----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILD 223 (772)
Q Consensus 157 ~~C~w~G--v~C~~----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ 223 (772)
..|.|.+ |.|.+ .+++.|+|++|.+.+..|..+.++++|++|+|++|.+.+.+| ..+.++++|++||
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4577777 88973 358899999999999889999999999999999999998885 5689999999999
Q ss_pred ccCCcCcccCCcccCCCCCCCEEECccCCCcccCChh--hcCCCCCCEEEcCCCCCCCccccc
Q 004129 224 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 224 ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~--~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
|++|.+++..|..++++++|++|+|++|.++|.+|.. +..+++|+.|+|++|.+++..|..
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc
Confidence 9999999999999999999999999999999988776 899999999999999999877753
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.35 E-value=2.6e-12 Score=134.29 Aligned_cols=120 Identities=19% Similarity=0.213 Sum_probs=61.2
Q ss_pred CCCceeeEEeC-CCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc
Q 004129 157 NPCSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS 235 (772)
Q Consensus 157 ~~C~w~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~ 235 (772)
+.|.|.|+.|. .+.++.+++++++|.. +|..+. +.|+.|+|++|.+++..+..++++++|++|+|++|.++.-.+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 56888888775 2333455555555553 443332 3455555555555543334455555555555555555532222
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 236 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 123 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS 123 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe
Confidence 23445555555555555544333334455555555555555554
No 278
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.34 E-value=4.6e-12 Score=122.92 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=92.5
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004129 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.+++++|.|.. +|..+. +.|++|+|++|.+++..|..+.++++|++|+|++|++++-.|..+.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 34556666665 776663 899999999999999889999999999999999999997656667999999999999999
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 253 YLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++-.|..+..+++|+.|+|++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 998666679999999999999999997655
No 279
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.32 E-value=1.8e-12 Score=149.87 Aligned_cols=108 Identities=23% Similarity=0.237 Sum_probs=101.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.|++ +|. ++.|++|+.|+|++|.++ .||..++++++|+.|+|++|.+++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 36689999999998 776 999999999999999999 899999999999999999999998 88 89999999999999
Q ss_pred cCCCcccC-ChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 250 NNQYLGGI-SPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 250 ~N~~~G~i-P~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+|++++.+ |..++.+++|+.|+|++|.+++..|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999987 9999999999999999999998655
No 280
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.32 E-value=6.2e-13 Score=156.42 Aligned_cols=124 Identities=14% Similarity=0.171 Sum_probs=114.4
Q ss_pred CCceeeEEeC---CCcEEEEEecCCCCccc-----------------Cchhhc--CCCCCCEEEcccCcCcccCchhhcC
Q 004129 158 PCSWFGVECS---DGKVVILNLRDLCLGGM-----------------LAPELG--QLSELKSIILRNNSFFGTIPKEIGE 215 (772)
Q Consensus 158 ~C~w~Gv~C~---~~~v~~l~L~~~~l~G~-----------------ip~~l~--~l~~L~~L~L~~N~l~G~iP~~l~~ 215 (772)
++...|+.-. -.++..|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..+++
T Consensus 192 ~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 192 SNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred cCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4567774321 25788999999999997 999999 9999999999999999999999999
Q ss_pred CCCCCEeeccCCc-Ccc-cCCcccCCC------CCCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004129 216 LKELEILDLGFNN-FSG-PFPSDFGNS------FSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 216 l~~L~~L~ls~N~-l~G-~iP~~l~~l------~~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|++|+|++|+ ++| .+|..++++ ++|++|++++|+++ .||. .++++++|+.|+|++|.++|.+|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 9999999999998 999 999999887 99999999999999 9999 99999999999999999999999
No 281
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.32 E-value=4.8e-12 Score=125.37 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=99.7
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004129 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+.+++++++| +.||..+.. .|++|+|++|.+++..|. .++++++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 4789999999 568876654 899999999999877665 489999999999999999999999999999999999999
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 251 NQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
|++++-.|..+..+++|+.|+|++|.+++.+|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 121 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS 121 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH
Confidence 9999998888999999999999999999987754
No 282
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.31 E-value=8e-12 Score=121.76 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=93.6
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccC
Q 004129 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N 251 (772)
+.++++++.| +.||..+. +.|++|+|++|.+++..|..++++++|++|+|++|++++-.+..+.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3678888888 56888765 89999999999999988999999999999999999999844445689999999999999
Q ss_pred CCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 252 QYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 252 ~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++++-.+..+..+++|+.|+|++|.++...+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9996555558999999999999999986543
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.30 E-value=7.9e-12 Score=130.79 Aligned_cols=114 Identities=19% Similarity=0.204 Sum_probs=79.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|+.|++
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 35667777777777655555677777777777777777665656677777777777777777655555677777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..|
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 7777776555556677777777777777776544
No 284
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.30 E-value=1.7e-12 Score=125.44 Aligned_cols=112 Identities=20% Similarity=0.165 Sum_probs=98.4
Q ss_pred CcEEEEEecCCCCc-ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLG-GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~-G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+. |.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45779999999998 88998889999999999999999876 6788999999999999999998888888899999999
Q ss_pred CccCCCccc-CChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 248 LDNNQYLGG-ISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G~-iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|.+++- .+..+..+++|+.|++++|.+++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 999998873 33788999999999999999986543
No 285
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.30 E-value=9.4e-12 Score=128.54 Aligned_cols=114 Identities=23% Similarity=0.202 Sum_probs=100.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 46889999999999987777899999999999999999777778899999999999999999766666789999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.|..+..+++|+.|+|++|.+++..+
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 9999987666678999999999999999996544
No 286
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.29 E-value=9.5e-12 Score=124.53 Aligned_cols=114 Identities=18% Similarity=0.112 Sum_probs=100.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 46889999999999755556789999999999999999766666899999999999999999866667899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++-.+..+..+++|+.|+|++|.+++..|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999997666668899999999999999998765
No 287
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.29 E-value=8.3e-12 Score=126.45 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=102.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++..|..+..+++|++|+|++|.+++-.+..+..+++|+.|+|++|.+++..|..+.++++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 46889999999999988999999999999999999999544445688999999999999999988999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++-.+..+..+++|+.|+|++|.++..
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988777899999999999999998764
No 288
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=9e-12 Score=134.99 Aligned_cols=109 Identities=18% Similarity=0.145 Sum_probs=94.4
Q ss_pred CceeeEEeCCCcEEEEEecCC-CCcccCchhhcCCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcc
Q 004129 159 CSWFGVECSDGKVVILNLRDL-CLGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 159 C~w~Gv~C~~~~v~~l~L~~~-~l~G~ip~~l~~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
|.|..|.|+ ++ +|.+ ||. |..+++|+.|+|++ |.|++..|..+++|++|+.|+|++|+|+|..|..
T Consensus 8 C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 888888885 34 5665 888 99999999999996 9999988889999999999999999999988889
Q ss_pred cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 237 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++++++|+.|+|++|+|++ +|+.+.....|+.|+|.+|.|...
T Consensus 76 ~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp GGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCEEECCSSCCCCC
T ss_pred hcCCcCCCEEeCCCCccce-eCHHHcccCCceEEEeeCCCccCC
Confidence 9999999999999999996 555444333499999999999864
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.29 E-value=8.1e-12 Score=145.87 Aligned_cols=128 Identities=17% Similarity=0.109 Sum_probs=109.7
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCE
Q 004129 157 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 221 (772)
Q Consensus 157 ~~C~w~----Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~ 221 (772)
+||.+. .|.|.+ ..++.|+|++|.+++-.+..+.+|++|++|+|++|.+++-.|..+.+|++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 467653 578963 25789999999999877778999999999999999999877778999999999
Q ss_pred eeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004129 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 222 L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
|+|++|++++-.|..+.++++|++|+|++|++++-.|..++++++|++|+|++|.+++ .+|..
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 9999999997666678999999999999999998666678999999999999999976 34543
No 290
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.28 E-value=1e-11 Score=126.53 Aligned_cols=113 Identities=19% Similarity=0.126 Sum_probs=101.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 46889999999996544455789999999999999999776777899999999999999999 89999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|++++-.+..+..+++|+.|+|++|.+++..+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999997666678999999999999999998765
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.28 E-value=1.5e-11 Score=143.47 Aligned_cols=128 Identities=20% Similarity=0.160 Sum_probs=110.9
Q ss_pred CCCcee----eEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCE
Q 004129 157 NPCSWF----GVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEI 221 (772)
Q Consensus 157 ~~C~w~----Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~ 221 (772)
+||.|. .|.|.+ .+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 567763 678853 36889999999999988888999999999999999999888888999999999
Q ss_pred eeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004129 222 LDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 222 L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++.+|++|+|++|.+++ .+|..
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~ 148 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY 148 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHh
Confidence 9999999999889999999999999999999988777788999999999999999886 66764
No 292
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.27 E-value=1.7e-11 Score=128.32 Aligned_cols=113 Identities=22% Similarity=0.172 Sum_probs=98.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+.+ + +.+..+++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|++
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 468899999999988 3 47899999999999999999877777899999999999999999877777899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|++++-.|..+..+++|+.|++++|.+++..+.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 99999876666678999999999999999965443
No 293
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=1.2e-11 Score=134.99 Aligned_cols=124 Identities=19% Similarity=0.203 Sum_probs=109.6
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004129 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
|.|..+.|.+. .++.|+|++|.+++..+..+. .+++|++|+|++|.+++..|..+.++++|++|||++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 67888999632 467899999999987666676 899999999999999988788899999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|++++-.+..+.++++|++|+|++|++++-.|..+..+.+|+.|+|++|.+++ +|.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~ 153 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPV 153 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCG
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCH
Confidence 99998777778999999999999999998888899999999999999999996 444
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.25 E-value=3.6e-11 Score=125.84 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=98.9
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 47889999999988777788999999999999999987777788899999999999999998877888899999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC-ccccc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~~ 284 (772)
+|.+++-.+..+..+++|+.|++++|.+++ .+|..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchh
Confidence 999888766678889999999999999886 35553
No 295
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.24 E-value=1.8e-11 Score=137.43 Aligned_cols=112 Identities=19% Similarity=0.134 Sum_probs=92.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.++|++|.+.+.+|..++.+++|++|+|++|.+++..|..++++++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 45778888888888888888888888888888888888877888888888888888888887777777888888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++..|..+..+++|++|+|++|.+++-
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccC
Confidence 88888887788888888888888888888863
No 296
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.23 E-value=1.3e-11 Score=140.24 Aligned_cols=122 Identities=19% Similarity=0.109 Sum_probs=100.9
Q ss_pred CCceeeEEeCC-CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCc
Q 004129 158 PCSWFGVECSD-GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPS 235 (772)
Q Consensus 158 ~C~w~Gv~C~~-~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~ 235 (772)
.|.+.++.|.. ..+..|+|++|.++|..|..++.+++|++|+|++|.++|.+|..+. ++++|+.|+|++|.+++. |
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~- 185 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K- 185 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-
Confidence 36677777763 5788999999999998888888899999999999999998888876 789999999999999876 3
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 236 DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
.+..+++|+.|+|++|.++| +|+.+..+++|+.|+|++|.+++ +|.
T Consensus 186 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 186 GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cch
Confidence 34568899999999999887 55568888999999999999985 554
No 297
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=4e-12 Score=153.38 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=111.5
Q ss_pred CCceeeEEeC---CCcEEEEEecCCCCcc-----------------cCchhhc--CCCCCCEEEcccCcCcccCchhhcC
Q 004129 158 PCSWFGVECS---DGKVVILNLRDLCLGG-----------------MLAPELG--QLSELKSIILRNNSFFGTIPKEIGE 215 (772)
Q Consensus 158 ~C~w~Gv~C~---~~~v~~l~L~~~~l~G-----------------~ip~~l~--~l~~L~~L~L~~N~l~G~iP~~l~~ 215 (772)
.|...|+.-. -.+++.|+|++|.|+| .||+.++ +|++|++|+|++|.+.|.+|..+++
T Consensus 434 ~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 434 TNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp SCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred cCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 3567775322 2578999999999999 4999988 9999999999999999999999999
Q ss_pred CCCCCEeeccCCc-Ccc-cCCcccCCCC-------CCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004129 216 LKELEILDLGFNN-FSG-PFPSDFGNSF-------SLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 216 l~~L~~L~ls~N~-l~G-~iP~~l~~l~-------~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
+++|+.|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .||. .++++++|+.|+|++|.++ .+|
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 9999999999998 999 9998777665 9999999999999 9999 9999999999999999999 888
No 298
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.23 E-value=1.7e-11 Score=121.81 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=92.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+ ..++.+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..++.+++|++|++
T Consensus 66 ~~L~~L~l~~n~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCC--SCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCC--CcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 3577888888854 34457888999999999999999888888899999999999999999888888889999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+.+.+| .+..+++|+.|++++|.+++
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9998777777 68889999999999998886
No 299
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.22 E-value=3.3e-11 Score=140.62 Aligned_cols=113 Identities=16% Similarity=0.163 Sum_probs=72.2
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004129 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..++++++.+++-.+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 34566666665543333356677777777777777766666677777777777777777766666666777777777777
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 251 NQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|.+++-.|..++.+++|++|+|++|.+++..|.
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 776633223346677777777777777665543
No 300
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.22 E-value=6.5e-12 Score=144.85 Aligned_cols=112 Identities=26% Similarity=0.318 Sum_probs=99.6
Q ss_pred CCCC-----ceeeE-EeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcC
Q 004129 156 VNPC-----SWFGV-ECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229 (772)
Q Consensus 156 ~~~C-----~w~Gv-~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l 229 (772)
.++| .|.|+ .|..++++.|+|++|+|++ ||..+. ++|++|+|++|.|+ .|| ..+++|+.|+|++|+|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l 112 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRL 112 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCC
T ss_pred CCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCC
Confidence 3577 79999 7877789999999999998 888774 89999999999999 788 5689999999999999
Q ss_pred cccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 230 ~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++ ||. +.+ +|++|+|++|.+++ ||. .+++|+.|+|++|.+++ +|.
T Consensus 113 ~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 113 ST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp SC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred CC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC
Confidence 98 888 765 99999999999998 887 68999999999999997 665
No 301
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.22 E-value=1.4e-11 Score=149.74 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=78.2
Q ss_pred CceeeEEeCCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccC-chhhcCCCCCCEeeccCCcCcccCCccc
Q 004129 159 CSWFGVECSDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTI-PKEIGELKELEILDLGFNNFSGPFPSDF 237 (772)
Q Consensus 159 C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~i-P~~l~~l~~L~~L~ls~N~l~G~iP~~l 237 (772)
|+|+.|.+-..+++.|+|++|.+++..|..+.++++|++|+|++|.+.+.| |..++++++|++|+|++|.+++..|..+
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 445555553346667777777777666666666666666666666666666 4556666666666666666666666666
Q ss_pred CCCCCCCEEECccCCCcccCChh--hcCCCCCCEEEcCCCCCCCcc
Q 004129 238 GNSFSLTTLLLDNNQYLGGISPE--LHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~iP~~--~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+++++|++|+|++|.+++.+|.. +.++++|+.|+|++|.+++..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccc
Confidence 66666666666666666655554 566666666666666666543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.21 E-value=2.8e-11 Score=128.57 Aligned_cols=110 Identities=17% Similarity=0.145 Sum_probs=57.8
Q ss_pred cEEEEEecCCCCcccCc-hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004129 170 KVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+..|+|++|.+.+..+ ..+..+++|++|+|++|.+.+.+|..+..+++|+.|+|++|.+++ .+|..+..+++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 44455555555544333 344555555555555555555555555555555555555555554 3455555555555555
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+++|.+++..|..+..+++|+.|+|++|.+++
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 55555555445555555555555555555554
No 303
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.20 E-value=2.5e-11 Score=120.59 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=98.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+. .+| .+..+++|++|+|++|.+. .++.+..+++|++|++++|.+++..|..++.+++|++|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 35779999999998 566 7999999999999999654 4558999999999999999999999999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..+..+++|+.|+|++|.+.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~ 154 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh
Confidence 99999999999999999999999999985555664
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.20 E-value=1.9e-11 Score=132.90 Aligned_cols=124 Identities=23% Similarity=0.258 Sum_probs=97.9
Q ss_pred CCCceeeEEeC--C-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEee
Q 004129 157 NPCSWFGVECS--D-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILD 223 (772)
Q Consensus 157 ~~C~w~Gv~C~--~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ 223 (772)
.+|.|.|+ |+ + .+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 46999998 64 1 2578889999988876555788899999999999999887788888899999999
Q ss_pred ccCCcCcccCCcccCCCCCCCEEECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCCccc
Q 004129 224 LGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISP--ELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 224 ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|.+++-.+..++++++|++|++++|.++ .+|. .+..+++|+.|++++|...+.++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC
Confidence 9999988633334788889999999999887 4665 67888999999998885333443
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.20 E-value=9.7e-12 Score=132.84 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=90.9
Q ss_pred CcEEEEEecCCCCcccCchhh--cCCCCCCEEEcccCcCcccCchhhcCC-----CCCCEeeccCCcCcccCCcccCCCC
Q 004129 169 GKVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFGNSF 241 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~N~l~G~iP~~l~~l-----~~L~~L~ls~N~l~G~iP~~l~~l~ 241 (772)
.+++.|+|++|.++|.+|..+ ..+++|++|+|++|.+++. |..++.+ ++|++|+|++|.+++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 357788888888888888876 7888888888888888887 7777766 8888888888888887778888888
Q ss_pred CCCEEECccCCCccc--CChhh--cCCCCCCEEEcCCCCCCC
Q 004129 242 SLTTLLLDNNQYLGG--ISPEL--HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 242 ~L~~L~l~~N~~~G~--iP~~~--~~l~~L~~l~l~~N~l~g 279 (772)
+|++|+|++|++.|. +|+.+ ..+++|+.|+|++|.+++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 888888888888876 34555 788888888888888884
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.19 E-value=5.6e-11 Score=124.34 Aligned_cols=114 Identities=15% Similarity=0.137 Sum_probs=105.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..++++++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46889999999999877778999999999999999999988889999999999999999999877778999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++ .+|..+..+++|+.|+|++|.+++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 9999987 689999999999999999999997544
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.19 E-value=5.2e-11 Score=125.20 Aligned_cols=113 Identities=19% Similarity=0.103 Sum_probs=101.2
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc-CcccCCcccCCCCCCCEEEC
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN-FSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~-l~G~iP~~l~~l~~L~~L~l 248 (772)
.++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|. +.+..|..+.++++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 57899999999998777789999999999999999998889999999999999999997 66655788999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++..|..+..+++|++|++++|.+++..+
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCH
Confidence 9999998888889999999999999999986443
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.19 E-value=5.4e-11 Score=125.09 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=62.3
Q ss_pred cEEEEEecCCC-CcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 170 KVVILNLRDLC-LGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..|+|++|. +.+..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++|.+++..+..++++++|++|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 45555565554 43333445555556666666666655555555555566666666666555444444555555666666
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++-.+..+..+++|+.|+|++|.+++..|
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 6665554333345555556666666665555444
No 309
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.19 E-value=8.6e-11 Score=116.42 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=94.6
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCC
Q 004129 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQ 252 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~ 252 (772)
.++++++++. .||..+. +.|++|+|++|.++ .||..+.++++|+.|+|++|.+++..|..+.++++|++|+|++|.
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 5789999887 5776654 68999999999998 799999999999999999999998878889999999999999999
Q ss_pred CcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 253 YLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 253 ~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+++-.|..+..+++|+.|+|++|.+++-
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~ 117 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVV 117 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCee
Confidence 9998888899999999999999999953
No 310
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.18 E-value=7e-11 Score=133.67 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=111.3
Q ss_pred ceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc
Q 004129 160 SWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228 (772)
Q Consensus 160 ~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~ 228 (772)
.|..|.|.+ ..++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 478899963 257799999999999888899999999999999999999889999999999999999999
Q ss_pred CcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 229 l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+++-.+..++++++|++|+|++|.+++..|..+..+++|+.|+|++|.+++..|.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 9965555689999999999999999999999999999999999999999876554
No 311
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.18 E-value=1.8e-11 Score=115.68 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=94.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+.+. ..++.+++|++|+|++|.+++.+|..++.+++|++|++++|.+++ +.|..++++++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5788999999999886 779999999999999999999999999999999999999999998 4568899999999999
Q ss_pred CccCCCcccCC---hhhcCCCCCCEEEcCC
Q 004129 248 LDNNQYLGGIS---PELHVLKVISEIQVDE 274 (772)
Q Consensus 248 l~~N~~~G~iP---~~~~~l~~L~~l~l~~ 274 (772)
+++|.+++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999998766 5789999999999863
No 312
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.18 E-value=5.5e-11 Score=138.68 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=106.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++..|..++++++|++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 47889999999999988888999999999999999999988999999999999999999999877788999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++ .+|..++++++|++|+|++|.+++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999986 8899999999999999999999986554
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.17 E-value=5.8e-11 Score=138.47 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=105.5
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+++..|..+.++++|++|+|++|.+.+..|..++++++|++|+|++|.+++..|..++++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68899999999999888899999999999999999999889999999999999999999999999999999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC-cccc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTN-AASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g-~~p~ 283 (772)
+|.+++-.|..++.+++|++|+|++|.+++ .+|.
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK 148 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCccc
Confidence 999998667778999999999999999987 3444
No 314
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.17 E-value=4.1e-11 Score=127.28 Aligned_cols=116 Identities=18% Similarity=0.260 Sum_probs=88.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcc-cCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG-TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G-~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
.++..|+|++|.+.+.++..+..+++|++|+|++|.+.+ .+|..+..+++|+.|+|++|.+++..|..+.++++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 356677888887777777777778888888888888776 5677777788888888888888777777777778888888
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
|++|.+++..+..+..+++|+.|+|++|.+++..|..
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 8888877766666777788888888888887766643
No 315
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.17 E-value=3.7e-11 Score=115.93 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=97.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc-CCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+|++|.+++. .+..+..+++|++|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4688999999999886 7899999999999999999999999888899999999999999973 337899999999999
Q ss_pred CccCCCcccCC---hhhcCCCCCCEEEcCCCCCC
Q 004129 248 LDNNQYLGGIS---PELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G~iP---~~~~~l~~L~~l~l~~N~l~ 278 (772)
+++|.+++..+ ..+..+++|+.|++++|.++
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999987655 47899999999999999876
No 316
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.16 E-value=3.8e-11 Score=137.37 Aligned_cols=108 Identities=21% Similarity=0.257 Sum_probs=101.1
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..++++++|++|||++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 56889999999999988889999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ .+|..++.+++|++|++++|.+++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch
Confidence 9999998 789999999999999999999987
No 317
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.15 E-value=1.2e-10 Score=125.27 Aligned_cols=118 Identities=22% Similarity=0.308 Sum_probs=106.4
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+.+.|.+ ..++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999963 25789999999999877778999999999999999999988999999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.++ .+|..+. ++|++|++++|.+++-.+..+..+++|+.|++++|.++.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc
Confidence 998 7888776 799999999999987655678999999999999999973
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.15 E-value=6e-11 Score=137.06 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=98.3
Q ss_pred CcEEEEEecCCCCcccCc-hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCc-ccCCcccCCCCCCCEE
Q 004129 169 GKVVILNLRDLCLGGMLA-PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFS-GPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip-~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~-G~iP~~l~~l~~L~~L 246 (772)
..++.|+|++|.+.+..+ ..+..+++|++|+|++|.+.+.+|..+.++++|+.|+|++|.++ |.+|..+..+++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 356788888888888766 35788899999999999998888888888999999999999987 6788888889999999
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++++|++++..|..+..+++|+.|++++|.+++..|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 9999999888888888899999999999998876554
No 319
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.15 E-value=7.3e-11 Score=114.41 Aligned_cols=100 Identities=27% Similarity=0.271 Sum_probs=89.0
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|+|+.+.|++ ..++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 7899999963 25778999999999988889999999999999999999766666789999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCC
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGIS 258 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP 258 (772)
+|++-.|..+.++++|++|+|++|.|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998666679999999999999999987654
No 320
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.15 E-value=9.7e-11 Score=127.81 Aligned_cols=110 Identities=20% Similarity=0.154 Sum_probs=99.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++..|..+.++++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 46889999999999877778999999999999999999877778999999999999999999988999999999999999
Q ss_pred ccCCCcccCChhh----cCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLGGISPEL----HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~----~~l~~L~~l~l~~N~l~g 279 (772)
++|++++ +|..+ ..+++|+.|+|++|.+++
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999986 67665 579999999999999995
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.15 E-value=1.1e-10 Score=138.05 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=93.5
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++-.+..++++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 67888999998888777778888889999998888888888888888888888888888885433468888888888888
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|.+++-.|..++++++|++|+|++|.+++..|.
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG 139 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCch
Confidence 8888776667788888888888888888876654
No 322
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.14 E-value=1.2e-10 Score=130.97 Aligned_cols=123 Identities=20% Similarity=0.131 Sum_probs=107.9
Q ss_pred eeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcC
Q 004129 161 WFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNF 229 (772)
Q Consensus 161 w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l 229 (772)
|..|.|.+ ..++.|+|++|++.+..+..+.++++|++|+|++|.+++..|..+.++++|++|+|++|.+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 67899963 2578999999999998889999999999999999999998889999999999999999999
Q ss_pred cccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 230 SGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 230 ~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++..+..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|+..+.++.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 976666789999999999999999865556788899999999988766666665
No 323
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.14 E-value=1.4e-10 Score=122.61 Aligned_cols=108 Identities=21% Similarity=0.094 Sum_probs=52.8
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.+. .+|..+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++-.|..+..+++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 3445555555544 344444555555555555555554444445555555555555555554333334455555555555
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
+|++++-.+..+..+++|+.|+|++|.++
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 55554222222344555555555555554
No 324
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.13 E-value=9.1e-11 Score=135.75 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=99.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..++++++|++|||++|.++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46889999999999888889999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ .+|..++++++|++|+|++|.+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 9999987 778899999999999999999886
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.12 E-value=1.5e-10 Score=135.20 Aligned_cols=115 Identities=15% Similarity=0.135 Sum_probs=104.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++-.+..+.+|++|++|+|++|.+++-.|..+.++++|++|+|++|++++-.|..++++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 46889999999999866677999999999999999999876778899999999999999999866667999999999999
Q ss_pred ccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLG-GISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++ .+|..++.+++|+.|+|++|.+++-.|.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9999976 6889999999999999999999986554
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.12 E-value=1.8e-10 Score=123.68 Aligned_cols=119 Identities=22% Similarity=0.309 Sum_probs=104.3
Q ss_pred CCceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccC
Q 004129 158 PCSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGF 226 (772)
Q Consensus 158 ~C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~ 226 (772)
.|+|+.+.|.+ ..++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 37899999963 2578899999999987777899999999999999999998899999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 227 NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 227 N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
|.++ .+|..+. ++|++|++++|.+++-.+..+..+++|+.|++++|.++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 9998 6887665 689999999999887777778889999999999988863
No 327
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.11 E-value=1.9e-10 Score=133.07 Aligned_cols=94 Identities=20% Similarity=0.123 Sum_probs=66.4
Q ss_pred cCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEECccCCCcccCChh-hcCCCC
Q 004129 190 GQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPE-LHVLKV 266 (772)
Q Consensus 190 ~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l~~N~~~G~iP~~-~~~l~~ 266 (772)
..+++|++|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..++++++|+.|++++|.+++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 556677777777777777777777777777777777777776 45566777777777777777777766654 556677
Q ss_pred CCEEEcCCCCCCCcccc
Q 004129 267 ISEIQVDESWLTNAASR 283 (772)
Q Consensus 267 L~~l~l~~N~l~g~~p~ 283 (772)
|+.|+|++|.++|.+|.
T Consensus 430 L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp CCEEECCSSCCCGGGGS
T ss_pred CCEEECCCCCCCcchhh
Confidence 77777777777766654
No 328
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.11 E-value=3.8e-10 Score=109.74 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=91.7
Q ss_pred EEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccC
Q 004129 172 VILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNN 251 (772)
Q Consensus 172 ~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N 251 (772)
+.++++++++.. +|..+ .++|+.|+|++|.+++..+..++.+++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 478899998865 56544 479999999999999766667899999999999999999766666899999999999999
Q ss_pred CCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 252 QYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 252 ~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++++-.|..+..+++|+.|+|++|.+++-
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 115 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSV 115 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEe
Confidence 99987666789999999999999999953
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.11 E-value=2.8e-10 Score=118.77 Aligned_cols=114 Identities=21% Similarity=0.196 Sum_probs=90.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46788888888887533334577889999999999888766666788888999999999988877777888889999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++-.+..+..+++|+.|+|++|.+++-.+
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 9998886555557888889999999888886433
No 330
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.11 E-value=1.8e-11 Score=130.73 Aligned_cols=108 Identities=18% Similarity=0.234 Sum_probs=91.9
Q ss_pred EEEecCCCC-cccCchhhc-------CCCCCCEEEcccCcCcccCchhh--cCCCCCCEeeccCCcCcccCCcccCCC--
Q 004129 173 ILNLRDLCL-GGMLAPELG-------QLSELKSIILRNNSFFGTIPKEI--GELKELEILDLGFNNFSGPFPSDFGNS-- 240 (772)
Q Consensus 173 ~l~L~~~~l-~G~ip~~l~-------~l~~L~~L~L~~N~l~G~iP~~l--~~l~~L~~L~ls~N~l~G~iP~~l~~l-- 240 (772)
.|+|++|.+ .+.+|..+. ++++|++|+|++|.++|.+|..+ +.+++|++|+|++|.+++. |..++++
T Consensus 67 ~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~ 145 (312)
T 1wwl_A 67 SLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ 145 (312)
T ss_dssp HCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT
T ss_pred hcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH
Confidence 445556666 456666665 78999999999999999999877 8899999999999999987 8777776
Q ss_pred ---CCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004129 241 ---FSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 241 ---~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|++|+|++|++++..|..++.+++|+.|+|++|.++|.+
T Consensus 146 ~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 146 WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 89999999999999888889999999999999999998874
No 331
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.10 E-value=6.2e-11 Score=136.42 Aligned_cols=116 Identities=22% Similarity=0.248 Sum_probs=107.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc-cCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG-PFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l~~l~~L~~L~ 247 (772)
.+++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 478899999999999888899999999999999999999888889999999999999999997 6788999999999999
Q ss_pred CccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 248 LDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 248 l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
+++|.+.+.+| ..+..+++|+.|++++|.+++.+|..
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 99999888887 47899999999999999999987764
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.10 E-value=1.3e-10 Score=118.75 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=96.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCc-CcccCchhhcCCCCCCEeeccC-CcCcccCCcccCCCCCCCEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~-l~G~iP~~l~~l~~L~~L~ls~-N~l~G~iP~~l~~l~~L~~L 246 (772)
..++.|+|++|.+.+..+..+..+++|++|+|++|. +++-.+..+.++++|++|+|++ |.+++-.|..+.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478899999999998777789999999999999997 7765556889999999999999 99997666778999999999
Q ss_pred ECccCCCcccCChhhcCCCCCC---EEEcCCC-CCCCc
Q 004129 247 LLDNNQYLGGISPELHVLKVIS---EIQVDES-WLTNA 280 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~---~l~l~~N-~l~g~ 280 (772)
++++|.+++ +|. +..+.+|+ .|++++| .+++-
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i 146 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI 146 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc
Confidence 999999988 887 88888888 9999999 88753
No 333
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.10 E-value=1.4e-10 Score=132.76 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=51.7
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEEC
Q 004129 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l 248 (772)
+..|++++|.+.+..- ...+++|++|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..++++++|++|++
T Consensus 304 L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~L 381 (520)
T 2z7x_B 304 IKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDI 381 (520)
T ss_dssp CSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEEC
T ss_pred eeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEEC
Confidence 4444454444433210 1344445555555555554444444555555555555555544 44444444555555555
Q ss_pred ccCCCcccCChh-hcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~-~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++.+|.. +..+++|+.|++++|.+++.+|
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 555554444443 3444455555555555544444
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.10 E-value=2.4e-10 Score=120.79 Aligned_cols=109 Identities=21% Similarity=0.163 Sum_probs=96.3
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++. |.. +.+++|+.|+|++|.++ .+|..+..+++|++|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 578999999999988888899999999999999999864 433 78999999999999998 789889999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
+|++++-.|..+..+++|+.|+|++|.+++-.
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 140 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLP 140 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccC
Confidence 99999777778899999999999999998643
No 335
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.09 E-value=6.3e-12 Score=149.77 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=102.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.|+ .||..+++|++|++|+|++|.|+ .||..+++|++|++|+|++|.|+ .||..++++++|++|+|
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 46789999999999 89999999999999999999999 89999999999999999999997 89999999999999999
Q ss_pred ccCCCcccCChhhcCCCCC-CEEEcCCCCCCCccccc
Q 004129 249 DNNQYLGGISPELHVLKVI-SEIQVDESWLTNAASRA 284 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L-~~l~l~~N~l~g~~p~~ 284 (772)
++|.|+|.+|..+..+..+ ..|+|++|.++|.+|..
T Consensus 324 ~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 324 EGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp TTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred CCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9999999999888665322 34789999999999874
No 336
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=140.41 Aligned_cols=115 Identities=21% Similarity=0.205 Sum_probs=97.6
Q ss_pred CcEEEEEecCCCCcccC-chhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcc--cCCCCCCCE
Q 004129 169 GKVVILNLRDLCLGGML-APELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD--FGNSFSLTT 245 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~i-p~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~--l~~l~~L~~ 245 (772)
..++.|+|++|.+.+.| |..+.+|++|++|+|++|.+.+..|..++++++|++|+|++|.+++.+|.. ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 46778899988888888 456888999999999999999888888999999999999999999888766 888999999
Q ss_pred EECccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 246 LLLDNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 246 L~l~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
|+|++|.+++..| +.++++++|+.|+|++|.+++..|.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 9999999888655 5788899999999999988876654
No 337
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.08 E-value=1.2e-10 Score=132.46 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=99.5
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++|.++|.+|..+. .+++|++|+|++|.+++. | .+..+++|+.|+|++|.++| +|+.++.+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 5799999999999999998886 799999999999999986 3 34579999999999999998 566699999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCC-Ccccc
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~-g~~p~ 283 (772)
|++|.+++ +|..+..+++|+.|++++|.++ +.+|.
T Consensus 221 Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 221 LRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 99999996 8999999999999999999998 55554
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.08 E-value=2.5e-10 Score=125.59 Aligned_cols=112 Identities=16% Similarity=0.218 Sum_probs=93.4
Q ss_pred cEEEEEecCCCCcccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 170 KVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+..++++++.+.. +|+. +..+++|++|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45678888887665 5544 688999999999999998877778999999999999999999887888899999999999
Q ss_pred ccCCCcccCChh-hcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISPE-LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~-~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.++ .+|+. +..+++|++|++++|.+++..|.
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~ 159 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD 159 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh
Confidence 999988 56665 48899999999999999875544
No 339
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.06 E-value=4.6e-10 Score=125.74 Aligned_cols=124 Identities=19% Similarity=0.127 Sum_probs=108.5
Q ss_pred ceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCc
Q 004129 160 SWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNN 228 (772)
Q Consensus 160 ~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~ 228 (772)
.|..|.|.+ ..++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..+.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 367899963 246789999999999888899999999999999999998888899999999999999999
Q ss_pred CcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 229 FSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 229 l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+++-.+..+.++++|++|+|++|.+++-.+..+..+++|+.|+|++|+..+.++.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 9976566799999999999999999876666888999999999999776666665
No 340
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.06 E-value=2.1e-10 Score=111.60 Aligned_cols=105 Identities=21% Similarity=0.207 Sum_probs=89.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCC-CCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCccc-CCCCCCCEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLS-ELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDF-GNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~-~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l-~~l~~L~~L 246 (772)
..++.|+|++|.+.. +| .+..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++ +|+.+ +.+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEE
Confidence 457899999999984 54 455555 999999999999975 678999999999999999996 55554 889999999
Q ss_pred ECccCCCcccCCh--hhcCCCCCCEEEcCCCCCCC
Q 004129 247 LLDNNQYLGGISP--ELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 247 ~l~~N~~~G~iP~--~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++|.+ +.+|. .+..+++|+.|++++|.++.
T Consensus 94 ~L~~N~i-~~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 94 ILTNNSL-VELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp ECCSCCC-CCGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ECCCCcC-CcchhhHhhhcCCCCCEEEecCCCCCC
Confidence 9999998 56787 88899999999999999873
No 341
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.05 E-value=3.8e-10 Score=131.57 Aligned_cols=118 Identities=19% Similarity=0.127 Sum_probs=105.2
Q ss_pred CcEEEEEecCCCCcccCchh-hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc---CCcccCCCCCCC
Q 004129 169 GKVVILNLRDLCLGGMLAPE-LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP---FPSDFGNSFSLT 244 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~-l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~---iP~~l~~l~~L~ 244 (772)
..++.|+|++|.+.+.+++. +..+++|++|+|++|.+.+..|..++.+++|+.|+|++|.+++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 36789999999999887765 88999999999999999999999999999999999999999883 335688999999
Q ss_pred EEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCccccccc
Q 004129 245 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASRASC 286 (772)
Q Consensus 245 ~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 286 (772)
+|++++|.+++..|..+..+++|+.|+|++|.+++..|....
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 521 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS 521 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGT
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhC
Confidence 999999999999999999999999999999999998776533
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.05 E-value=8e-11 Score=125.53 Aligned_cols=114 Identities=14% Similarity=0.044 Sum_probs=63.7
Q ss_pred cEEEEEecCCCCcccCc----hhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc--CC--cccCCCC
Q 004129 170 KVVILNLRDLCLGGMLA----PELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP--FP--SDFGNSF 241 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip----~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~--iP--~~l~~l~ 241 (772)
.+..|+|++|.+++.++ ..+..+++|++|+|++|.+.+..|..++.+++|++|||++|++.|. +| ..++.++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 45556666666665444 2334566666666666666655556666666666666666665542 22 2234556
Q ss_pred CCCEEECccCCCc--ccCChh-hcCCCCCCEEEcCCCCCCCcccc
Q 004129 242 SLTTLLLDNNQYL--GGISPE-LHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 242 ~L~~L~l~~N~~~--G~iP~~-~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|+|++|+++ +.++.. +..+++|++|+|++|.+++.+|.
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 6666666666654 122222 34556666666666666665443
No 343
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.05 E-value=4.6e-10 Score=129.60 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=65.7
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|++++|++++-.+..++++++|++|+++
T Consensus 53 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 132 (570)
T 2z63_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (570)
T ss_dssp SCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECC
T ss_pred CceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecC
Confidence 45556666666555444455566666666666666655555556666666666666666654333345666666666666
Q ss_pred cCCCcc-cCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 250 NNQYLG-GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 250 ~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+|.+++ .+|..++++++|+.|++++|.+++.
T Consensus 133 ~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 666655 4566666666666666666666544
No 344
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.03 E-value=6.2e-10 Score=122.50 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcc-cCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~-l~~l~~L~~L~ 247 (772)
.++..|+|++|.+.+..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|.++ .+|.. ++++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 35789999999998877778999999999999999999888888999999999999999999 56665 58999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+++|.+++-.|..+..+++|+.|++++|.+++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999988888899999999999999999864
No 345
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.03 E-value=4e-10 Score=133.29 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=85.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..|..++++++|++|+|++|.+++-.+..++++++|++|+|++|.+++..|..++++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 35677778777777777777777788888888887777533335777778888888888777665667777778888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++..|..++++++|++|++++|.+++..+.
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 88877777777777777778888877777765543
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.03 E-value=1.6e-10 Score=123.13 Aligned_cols=110 Identities=21% Similarity=0.193 Sum_probs=91.9
Q ss_pred cEEEEEecCCCCcccCchhh--cCCCCCCEEEcccCcCcccCc----hhhcCCCCCCEeeccCCcCcccCCcccCCCCCC
Q 004129 170 KVVILNLRDLCLGGMLAPEL--GQLSELKSIILRNNSFFGTIP----KEIGELKELEILDLGFNNFSGPFPSDFGNSFSL 243 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l--~~l~~L~~L~L~~N~l~G~iP----~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L 243 (772)
+++.|+|++|.+.|.+|..+ ..+++|++|+|++|.+++.+| ..+..+++|++|+|++|.+++..|..++++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47889999999999888887 889999999999999988766 345678899999999999988888888999999
Q ss_pred CEEECccCCCccc--CChh--hcCCCCCCEEEcCCCCCCC
Q 004129 244 TTLLLDNNQYLGG--ISPE--LHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 244 ~~L~l~~N~~~G~--iP~~--~~~l~~L~~l~l~~N~l~g 279 (772)
++|+|++|++.|. +|.. ++.+++|++|+|++|.++.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 211 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET 211 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc
Confidence 9999999998764 3332 3678899999999999873
No 347
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.02 E-value=4.2e-10 Score=127.25 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=90.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..+.++++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 46778888888888877778888888888888888887544455778888888888888888877878888888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~ 281 (772)
++|.+++-.|..+..+++|+.|+|++|.+++..
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 888888777777888888888888888887643
No 348
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.02 E-value=8.2e-10 Score=114.48 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=101.6
Q ss_pred cccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCceEEEE
Q 004129 481 NIIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 481 ~iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV 559 (772)
.+....+.|+.+.||+.... +..+++|......... ...+.+|+++++.+. |..+.++++++...+ ..++|
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv 88 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLL 88 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEE
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-----HHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEE
Confidence 44455556777899999755 6788898875421111 135888999999884 677889999988765 67999
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------ 603 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~------------------------------------ 603 (772)
|||++|.+|.+.+. +......++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999876531 11123468889999999999711
Q ss_pred ---------------------CCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 604 ---------------------PPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 604 ---------------------~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
+.++|+|+++.|||++++..+.|.||+.+
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 34899999999999987666789999864
No 349
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.00 E-value=2.4e-10 Score=111.21 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=92.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc--ccCCCCCCCEEE
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTLL 247 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~--~l~~l~~L~~L~ 247 (772)
.+..|+|++|.+++. +.+..+++|++|+|++|.+++..|..++.+++|++|+|++|.++ .+|. .++.+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 688999999999985 67999999999999999999654444589999999999999994 6776 789999999999
Q ss_pred CccCCCcccCChh----hcCCCCCCEEEcCCCCCC
Q 004129 248 LDNNQYLGGISPE----LHVLKVISEIQVDESWLT 278 (772)
Q Consensus 248 l~~N~~~G~iP~~----~~~l~~L~~l~l~~N~l~ 278 (772)
+++|.++ .+|.. +..+++|+.|+++.|...
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 57775 899999999999988765
No 350
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.00 E-value=4.8e-10 Score=129.59 Aligned_cols=101 Identities=22% Similarity=0.180 Sum_probs=91.7
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccC-CcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPF-PSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~i-P~~l~~l~~L~~L~ 247 (772)
..++.|+|++|.|+ .||..++.|++|+.|+|++|.+++ || .++++++|+.|+|++|++++.+ |..++++++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 47889999999999 899999999999999999999998 88 8999999999999999999987 99999999999999
Q ss_pred CccCCCcccCChh---hcCCCCCCEEEc
Q 004129 248 LDNNQYLGGISPE---LHVLKVISEIQV 272 (772)
Q Consensus 248 l~~N~~~G~iP~~---~~~l~~L~~l~l 272 (772)
|++|.++|..|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999876632 334889998865
No 351
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.00 E-value=2.6e-09 Score=119.55 Aligned_cols=114 Identities=19% Similarity=0.110 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|.+++-.+..+.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47889999999999887788999999999999999999666667899999999999999999766668899999999999
Q ss_pred ccCCCcccCCh-hhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISP-ELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~-~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|+..+.+|+ .+..+++|+.|+|++|.++ .+|.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~ 202 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN 202 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccc
Confidence 99777777776 5788999999999999998 4553
No 352
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.99 E-value=9.4e-10 Score=118.13 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=83.0
Q ss_pred CcEEEEEecCCCCc--ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEE
Q 004129 169 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L 246 (772)
..+..|+|++|.+. |..+..+..+++|++|++++|.++. +|..+. ++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 45677888888775 3566677778888888888888764 665543 678888888888887777777778888888
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|.+++..|..+..+++|+.|+|++|.++ .+|.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 88888877776667777788888888888777 5554
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.97 E-value=1.1e-09 Score=117.10 Aligned_cols=121 Identities=19% Similarity=0.118 Sum_probs=86.5
Q ss_pred CceeeEEeC-CCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc-CCCCCCEeeccCCcCcccCCcc
Q 004129 159 CSWFGVECS-DGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG-ELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 159 C~w~Gv~C~-~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
|...++.+. ...+..|+|++|.+++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++. | .
T Consensus 109 n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~ 186 (317)
T 3o53_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-G 186 (317)
T ss_dssp SCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-C
T ss_pred CccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-c
Confidence 344444443 24577888888888776666777788888888888888877666663 678888888888887764 3 3
Q ss_pred cCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 237 FGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
...+++|++|+|++|.+++ +|+.+..+++|+.|+|++|.++ .+|.
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~ 231 (317)
T 3o53_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEK 231 (317)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECT
T ss_pred ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhh
Confidence 3457788888888888775 5556777888888888888887 3554
No 354
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.97 E-value=1e-09 Score=127.88 Aligned_cols=111 Identities=22% Similarity=0.221 Sum_probs=102.1
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.+.+..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|.+++-.|..++++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 57899999999999888899999999999999999999888889999999999999999995444446999999999999
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 9999998888999999999999999999974
No 355
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.96 E-value=1.4e-09 Score=105.80 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=83.8
Q ss_pred CceeeEEeCC-----------CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 159 CSWFGVECSD-----------GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 159 C~w~Gv~C~~-----------~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
|...-+.|++ ..+..|+|++|.+.+..|..+..+++|++|+|++|.|++-.+..+.++++|++|+|++|
T Consensus 12 C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 12 CDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp ECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4556677752 25779999999999988889999999999999999999854555689999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCccc
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGG 256 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~ 256 (772)
++++-.|..+.++++|++|+|++|.|...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99975555599999999999999999864
No 356
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.96 E-value=7.4e-10 Score=113.19 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=98.7
Q ss_pred CcEEEEEecCCC-CcccCchhhcCCCCCCEEEccc-CcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCC--
Q 004129 169 GKVVILNLRDLC-LGGMLAPELGQLSELKSIILRN-NSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT-- 244 (772)
Q Consensus 169 ~~v~~l~L~~~~-l~G~ip~~l~~l~~L~~L~L~~-N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~-- 244 (772)
.+++.|+|++|. +++..+..+..+++|++|+|++ |.+++..|..+.++++|+.|+|++|.+++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 468899999997 7765555789999999999999 99997666788999999999999999998 887 88888888
Q ss_pred -EEECccC-CCcccCChhhcCCCCCC-EEEcCCCCCCCccccc
Q 004129 245 -TLLLDNN-QYLGGISPELHVLKVIS-EIQVDESWLTNAASRA 284 (772)
Q Consensus 245 -~L~l~~N-~~~G~iP~~~~~l~~L~-~l~l~~N~l~g~~p~~ 284 (772)
+|++++| .+++-.+..+..+++|+ .|++++|.++ .+|..
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999 88766556689999999 9999999998 77763
No 357
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.95 E-value=1.3e-09 Score=122.51 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=94.7
Q ss_pred CcEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++++.-+.+++ .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.+++..|..+.++++|+.|+
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEE
Confidence 4677889988666666766 47889999999999999985 45 578889999999999999988888899999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
|++|++++..|..+..+++|+.|+|++|.+++-.+
T Consensus 249 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred eCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 99999998888888899999999999999985443
No 358
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.95 E-value=9.2e-10 Score=117.71 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=98.0
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..+..|+|++|.+++..+..+. .+++|++|+|++|.+++. | ....+++|+.|+|++|.+++ +|+.+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 4799999999999998777774 799999999999999875 4 34469999999999999996 666799999999999
Q ss_pred CccCCCcccCChhhcCCCCCCEEEcCCCCCC-Ccccc
Q 004129 248 LDNNQYLGGISPELHVLKVISEIQVDESWLT-NAASR 283 (772)
Q Consensus 248 l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~-g~~p~ 283 (772)
|++|.++ .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 9999998 58999999999999999999999 55554
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.95 E-value=5e-12 Score=125.72 Aligned_cols=104 Identities=25% Similarity=0.319 Sum_probs=63.6
Q ss_pred EEEEEecCCCCcccCch------hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCC
Q 004129 171 VVILNLRDLCLGGMLAP------ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT 244 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~------~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~ 244 (772)
++.++|+.+.++|.+|+ .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 33444555555555554 66666666666666666665 55 5666666666666666666 4665555556666
Q ss_pred EEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 245 TLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 245 ~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++++|.+++ +| .+..+++|+.|+|++|.+++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 66666666665 33 45666666666666666654
No 360
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.95 E-value=5.3e-10 Score=120.27 Aligned_cols=110 Identities=21% Similarity=0.234 Sum_probs=78.4
Q ss_pred CcEEEEEecCCCCc--ccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEE
Q 004129 169 GKVVILNLRDLCLG--GMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~--G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L 246 (772)
..+..|+|++|.+. |..+..+..+ +|++|++++|.+++ +|..+. ++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 46778888888885 4556666666 77777777777765 665544 577777777777777666677777777777
Q ss_pred ECccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 247 LLDNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 247 ~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|++|.+++-.|..+..+++|+.|+|++|.++ .+|.
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 77777777766666777777777777777777 5554
No 361
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.94 E-value=8.4e-10 Score=119.75 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc--ccCCCCCCCEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS--DFGNSFSLTTL 246 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~--~l~~l~~L~~L 246 (772)
.+++.|+|++|.+++..|..+..+++|++|+|++|.+++..+..++++++|++|+|++|.+++ +|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 478899999999999878889999999999999999996444558999999999999999995 665 78899999999
Q ss_pred ECccCC-CcccCChhhcCCCCCCEEEcCCCCCCCccccc
Q 004129 247 LLDNNQ-YLGGISPELHVLKVISEIQVDESWLTNAASRA 284 (772)
Q Consensus 247 ~l~~N~-~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~~ 284 (772)
++++|+ +.+-.|..+..+++|+.|++++|.+++..|..
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS 193 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH
Confidence 999995 55545668899999999999999999876653
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.94 E-value=9.5e-10 Score=126.79 Aligned_cols=98 Identities=20% Similarity=0.178 Sum_probs=70.7
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
.+..|+|++|.+++ ||. .+++|++|+|++|.+++ ||. .+++|+.|+|++|.+++ +|. ++ ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 56677777777777 665 57778888888888876 675 56778888888888877 776 55 778888888
Q ss_pred cCCCcccCChhhcCCCCC-------CEEEcCCCCCCCccccc
Q 004129 250 NNQYLGGISPELHVLKVI-------SEIQVDESWLTNAASRA 284 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L-------~~l~l~~N~l~g~~p~~ 284 (772)
+|+++ .||. +.. +| +.|+|++|.++ .+|..
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGG
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHH
Confidence 88877 6776 544 56 77888888877 46653
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.92 E-value=3.2e-09 Score=112.13 Aligned_cols=106 Identities=23% Similarity=0.307 Sum_probs=77.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++.. + +..+++|++|+|++|.+++ +| .++.+++|+.|+|++|.+++ + +.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIK-P-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCc-c-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 45777888888777643 3 7778888888888888776 33 47778888888888888776 3 45777778888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++- +.+..+++|+.|+|++|.+++..|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 88877764 567777888888888887776544
No 364
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.92 E-value=3e-10 Score=127.88 Aligned_cols=49 Identities=12% Similarity=-0.018 Sum_probs=22.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKE 218 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~ 218 (772)
.++..+++++|.+ |.||+++++|++|++|+|++|.+.|.+|..++++++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 59 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQRE 59 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHH
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchh
Confidence 4577888999998 889999999999999999999999999988877654
No 365
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.92 E-value=2.8e-09 Score=120.09 Aligned_cols=100 Identities=16% Similarity=0.228 Sum_probs=71.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.++|. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|.+++ +| ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 3566777777777763 3 57777777777777777776 34 6777777777777777776 33 677777777777
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++ +| ++.+++|+.|++++|.+++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 7777776 44 6777777777777777776
No 366
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.90 E-value=4.9e-10 Score=120.35 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=91.9
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCccc-CchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEE
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLL 247 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~-iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~ 247 (772)
..++.++|++|.+.+.++. +..+++|++|+|++|.+++. +|..+..+++|+.|+|++|.+++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567788888888776554 66788899999999988876 888888889999999999988888888888888999999
Q ss_pred CccC-CCcc-cCChhhcCCCCCCEEEcCCC-CCCCc
Q 004129 248 LDNN-QYLG-GISPELHVLKVISEIQVDES-WLTNA 280 (772)
Q Consensus 248 l~~N-~~~G-~iP~~~~~l~~L~~l~l~~N-~l~g~ 280 (772)
+++| .+++ .+|..+..+++|+.|++++| .+++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9988 6776 37777888888999999988 88864
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.89 E-value=4.2e-09 Score=109.55 Aligned_cols=101 Identities=20% Similarity=0.220 Sum_probs=47.6
Q ss_pred cEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLD 249 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~ 249 (772)
+++.|+|++|.+++. ++ +..+++|++|+|++|.+++ +|.. .. ++|+.|+|++|.+++ +| .++++++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 344555555555442 22 4455555555555555543 3321 11 445555555555544 22 34455555555555
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
+|++++ +| .+..+++|+.|+|++|.+++
T Consensus 137 ~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 137 NNKLKS-IV-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp TSCCCB-CG-GGGGCTTCCEEECTTSCCCB
T ss_pred CCcCCC-Ch-HHccCCCCCEEECCCCcCcc
Confidence 555444 22 34455555555555555544
No 368
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.89 E-value=2.6e-09 Score=109.94 Aligned_cols=126 Identities=12% Similarity=0.123 Sum_probs=92.5
Q ss_pred ccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc--ccceeEEEEcCCCceEEEEEecCCC
Q 004129 488 DGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVFEYSPN 565 (772)
Q Consensus 488 ~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN--IV~l~g~~~~~~~~~~~LV~Ey~~~ 565 (772)
.|..+.||+....+|..+++|...... ...+.+|+++++.+++.+ +.+++++...++ ..++||||+++
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~i~G 99 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGEVPG 99 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEECCSS
T ss_pred CCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEecCC
Confidence 455689999987777889998864321 135778999998885544 456888877655 57999999999
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 004129 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT------------------------------------------ 603 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~------------------------------------------ 603 (772)
.+|. ... .+ ...++.++++.|..||+..
T Consensus 100 ~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 100 QDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp EETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred cccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 8884 211 11 2356777888888888643
Q ss_pred --------------CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 604 --------------PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 --------------~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
+.++|+|++|.|||++++..++|.||+.+.
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 129999999999999887667899999753
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.89 E-value=4.7e-09 Score=109.17 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=89.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.. ++ .+..+++|++|+|++|.+++..| +.++++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 467799999999875 55 78999999999999999997544 9999999999999999997 55433 3 89999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++ + +.+..+++|+.|+|++|.+++-
T Consensus 114 ~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 114 DNNELRD-T-DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-C-hhhcCcccccEEECCCCcCCCC
Confidence 9999987 4 4699999999999999999974
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.89 E-value=4.1e-09 Score=111.33 Aligned_cols=103 Identities=25% Similarity=0.304 Sum_probs=92.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+ + +.+..+++|++|+|++|.+++ + +.+..+++|+.|+|++|.+++. +.++.+++|+.|++
T Consensus 90 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 578899999999988 3 459999999999999999987 3 4689999999999999999975 67899999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++|.+++-.| +..+++|+.|+|++|.+++
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 9999987544 9999999999999999986
No 371
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.88 E-value=2e-10 Score=123.40 Aligned_cols=122 Identities=11% Similarity=0.077 Sum_probs=107.4
Q ss_pred CCceeeEEeCCCcEEEEEecCCCCcccCchhhcCC--CCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCccc-CC
Q 004129 158 PCSWFGVECSDGKVVILNLRDLCLGGMLAPELGQL--SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGP-FP 234 (772)
Q Consensus 158 ~C~w~Gv~C~~~~v~~l~L~~~~l~G~ip~~l~~l--~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~-iP 234 (772)
|.+|.++.|+...++.++|+++.+. +..+..+ +.++.|++++|.+.+.+|. +.++++|+.|+|++|.+++. +|
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH
Confidence 4479999887666889999999887 4556777 8999999999999988776 67899999999999999987 89
Q ss_pred cccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCC-CCCCc-ccc
Q 004129 235 SDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDES-WLTNA-ASR 283 (772)
Q Consensus 235 ~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N-~l~g~-~p~ 283 (772)
..+..+++|++|+|++|.+++.+|..++.+++|+.|+|++| .+++. ++.
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~ 162 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQT 162 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHH
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHH
Confidence 88999999999999999999999999999999999999999 78863 444
No 372
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.87 E-value=5.5e-10 Score=122.79 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=76.3
Q ss_pred CcEEEEEecCCCCc--c---cCchhhcCCCCCCEEEcccCcCc----ccCchhhcCCCCCCEeeccCCcCccc----CCc
Q 004129 169 GKVVILNLRDLCLG--G---MLAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~~l~--G---~ip~~l~~l~~L~~L~L~~N~l~----G~iP~~l~~l~~L~~L~ls~N~l~G~----iP~ 235 (772)
.+++.|+|++|.++ | .++..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 35667777777766 3 23336667777777777777775 56677777777777777777777665 555
Q ss_pred cc--CCCCCCCEEECccCCCcc----cCChhh-cCCCCCCEEEcCCCCCCCccc
Q 004129 236 DF--GNSFSLTTLLLDNNQYLG----GISPEL-HVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 236 ~l--~~l~~L~~L~l~~N~~~G----~iP~~~-~~l~~L~~l~l~~N~l~g~~p 282 (772)
.+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|.+++..+
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 55 336777777777777776 466666 556777777777777776543
No 373
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.86 E-value=5.9e-09 Score=111.01 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=81.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+ + +.+..+++|++|+|++|.+++ +|. +..+++|+.|+|++|.+++..| ++.+++|++|++
T Consensus 85 ~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 467788888888876 3 368888888888888888876 443 7888888888888888886433 778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++ +|+ +..+++|+.|+|++|.+++-.+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 8888876 444 7788888888888888876443
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.85 E-value=5.5e-09 Score=121.59 Aligned_cols=106 Identities=22% Similarity=0.282 Sum_probs=85.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.+.+..+ +..|++|+.|+|++|.+.+ +| .+..|++|+.|+|++|.+++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 467788888888887444 8888888888888888876 44 68888888888888888886 3 45788888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
++|.+++- +.+..+++|+.|+|++|.+++..|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88888774 578888888888888888887666
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.85 E-value=1.8e-11 Score=121.70 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=98.0
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..++.|+|++|.+.+ +| .+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|.+++ +| .++.+++|++|++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 468899999999988 77 8999999999999999998 789888889999999999999997 66 6889999999999
Q ss_pred ccCCCcccCC-hhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGIS-PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP-~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++--+ ..+..+++|+.|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999986322 4789999999999999999987664
No 376
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.85 E-value=7.5e-09 Score=110.16 Aligned_cols=104 Identities=23% Similarity=0.361 Sum_probs=81.4
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+.+. ++ +..+++|++|+|++|.+++ +| .+..+++|+.|+|++|.+++ +|. +..+++|++|++
T Consensus 63 ~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 4677888888888764 44 8888888888888888876 34 57888888888888888886 443 788888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++- |+ +..+++|+.|+|++|.+++-
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCC
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCC
Confidence 88888764 33 77888888888888888863
No 377
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.84 E-value=6e-09 Score=121.26 Aligned_cols=104 Identities=25% Similarity=0.301 Sum_probs=87.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+ + +.+..|++|+.|+|++|.+.+ + +.+..|++|+.|+|++|.+++. ..++.+++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 467889999998887 3 378889999999999999986 4 4588899999999999999875 57888999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|.+++..| +..+++|+.|+|++|.+++-
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 9999887665 88899999999999988863
No 378
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=9.7e-09 Score=111.67 Aligned_cols=142 Identities=11% Similarity=0.209 Sum_probs=102.7
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEee--ecccchhhhhHHHHHHHHHHHHhccC--CCcccceeEEEEcCCC-ceEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTS--VKSRADWSKNLESQFRKKIDTLSKVN--HKNFVNLIGYCEEDEP-FTRM 557 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~--~~~~~~~~~~~~~~f~~Ei~~L~~l~--HpNIV~l~g~~~~~~~-~~~~ 557 (772)
+..++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.++ +..+.++++++.+... ...+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4567788899999998764 567777654 2111 011346788999999986 4568889998876531 1358
Q ss_pred EEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 004129 558 MVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL----------------------------------- 602 (772)
Q Consensus 558 LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~----------------------------------- 602 (772)
+||||+++..+.+.. ...++...+..++.++++.|+.||+.
T Consensus 118 ~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 999999998875422 23467888889999999999999973
Q ss_pred ---------------------CCCeEeeCCCCCCeEECCCCc--EEEccccCcc
Q 004129 603 ---------------------TPPIAHRNLQSSSIYLTEDYA--AKISDFSFWN 633 (772)
Q Consensus 603 ---------------------~~~IvHrDLKp~NILld~~~~--~kL~DFGla~ 633 (772)
.+.++|+|+++.|||++.++. +.|.||+.+.
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~ 247 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELST 247 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence 145999999999999987653 6899999764
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.81 E-value=9.4e-09 Score=110.88 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=46.7
Q ss_pred EEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECcc
Q 004129 171 VVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDN 250 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~ 250 (772)
+..|+|++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|+.|++++|.+++. +.+..+++|+.|++++
T Consensus 223 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~ 296 (347)
T 4fmz_A 223 LNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNN 296 (347)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcC
Confidence 3444444444443211 4444444444444444443 1 2344444444444444444432 2244444444444444
Q ss_pred CCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 251 NQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 251 N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
|.+++..|..+..+++|+.|++++|.+++.
T Consensus 297 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp SCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CcCCCcChhHhhccccCCEEEccCCccccc
Confidence 444444444444444444444444444443
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.80 E-value=5.5e-09 Score=112.71 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=92.5
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.+++.|+|++|.+++. +.+..+++|++|+|++|.+++. | .+..+++|+.|+|++|.+++..|..++++++|+.|++
T Consensus 243 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 243 SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 4788999999999873 5689999999999999999874 4 5889999999999999999999999999999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCC
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
++|.+++..| +..+++|+.|++++|.++
T Consensus 319 ~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 319 SQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCccccccC--hhhhhccceeehhhhccc
Confidence 9999998666 889999999999999875
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.80 E-value=1e-08 Score=115.68 Aligned_cols=104 Identities=20% Similarity=0.223 Sum_probs=83.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
.++..|+|++|.+.+..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..| ++.+++|+.|++
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467788888888887554 7888888888888888887444 7888888888888888887544 778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 8888887655 67888888888888888874
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.79 E-value=4.3e-09 Score=118.43 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=73.6
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcc--cCchhhc-------------CC-CCCCEeeccCCcCccc
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFG--TIPKEIG-------------EL-KELEILDLGFNNFSGP 232 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G--~iP~~l~-------------~l-~~L~~L~ls~N~l~G~ 232 (772)
..++.|+|++|.+.+ +|.. +++|++|+|++|.++| .+|..+. .+ ++|+.|++++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356667777777666 4432 2566666666666665 4443321 22 578888999888887
Q ss_pred CCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC--ccccc
Q 004129 233 FPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN--AASRA 284 (772)
Q Consensus 233 iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g--~~p~~ 284 (772)
+|.. +++|++|++++|+++ .+|. .+++|+.|++++|.++| .+|..
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~ 378 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPES 378 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTT
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHH
Confidence 7764 578999999999988 5887 57889999999999998 67753
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.78 E-value=1.1e-08 Score=115.02 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=79.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|...|.+ .++.+++|++|+|++|.+++ +| ++.+++|+.|++++|.+++. .++.+++|+.|++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 35778888888777777 47788888888888888887 55 77888888888888888874 3778888888888
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
++|+++| +| ++.+++|+.|++++|.++|.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 8888887 66 77788888888888888874
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.77 E-value=1.1e-08 Score=119.31 Aligned_cols=82 Identities=22% Similarity=0.254 Sum_probs=43.6
Q ss_pred CCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEc
Q 004129 193 SELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQV 272 (772)
Q Consensus 193 ~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l 272 (772)
++|++|+|++|.+++ +| ..+++|+.|+|++|.++ .||. .+++|+.|+|++|+++ .||..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555555555554 44 33455555555555555 3444 3445555555555555 55555555555555555
Q ss_pred CCCCCCCcccc
Q 004129 273 DESWLTNAASR 283 (772)
Q Consensus 273 ~~N~l~g~~p~ 283 (772)
++|.++|.+|.
T Consensus 292 ~~N~l~~~~~~ 302 (622)
T 3g06_A 292 EGNPLSERTLQ 302 (622)
T ss_dssp CSCCCCHHHHH
T ss_pred cCCCCCCcCHH
Confidence 55555554443
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.76 E-value=1.8e-09 Score=118.58 Aligned_cols=109 Identities=14% Similarity=0.132 Sum_probs=49.0
Q ss_pred EEEEEecCCCCc-ccCc---hhhcCCCCCCEEEcccCcCc--c---cCchhhcCCCCCCEeeccCCcCc----ccCCccc
Q 004129 171 VVILNLRDLCLG-GMLA---PELGQLSELKSIILRNNSFF--G---TIPKEIGELKELEILDLGFNNFS----GPFPSDF 237 (772)
Q Consensus 171 v~~l~L~~~~l~-G~ip---~~l~~l~~L~~L~L~~N~l~--G---~iP~~l~~l~~L~~L~ls~N~l~----G~iP~~l 237 (772)
+..|+|++|.++ +.++ ..+..+++|++|+|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|..+
T Consensus 161 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred CcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 344444444444 2233 23444444555555555444 2 12324444445555555555443 3444444
Q ss_pred CCCCCCCEEECccCCCccc----CChhh--cCCCCCCEEEcCCCCCCC
Q 004129 238 GNSFSLTTLLLDNNQYLGG----ISPEL--HVLKVISEIQVDESWLTN 279 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~----iP~~~--~~l~~L~~l~l~~N~l~g 279 (772)
..+++|++|+|++|.+++. +|..+ +.+++|+.|+|++|.+++
T Consensus 241 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 241 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 4444455555555544443 33333 224445555555554443
No 386
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.75 E-value=9.4e-09 Score=115.91 Aligned_cols=107 Identities=25% Similarity=0.294 Sum_probs=95.8
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEEC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLL 248 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l 248 (772)
..+..|+|++|.+++..+ +..+++|+.|+|++|.+.+..| ++.+++|+.|+|++|.+++..| ++.+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 468899999999998544 8899999999999999998554 8899999999999999999776 789999999999
Q ss_pred ccCCCcccCChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 249 DNNQYLGGISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 249 ~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
++|.+++. +.+..+++|+.|++++|.++|..|.
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~ 371 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTPL 371 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGG
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccchh
Confidence 99999885 5789999999999999999998873
No 387
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.74 E-value=1.5e-08 Score=109.44 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=77.0
Q ss_pred CEEEcccC-cCcccCchhhcCCCCCCEeeccC-CcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcC
Q 004129 196 KSIILRNN-SFFGTIPKEIGELKELEILDLGF-NNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVD 273 (772)
Q Consensus 196 ~~L~L~~N-~l~G~iP~~l~~l~~L~~L~ls~-N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~ 273 (772)
..++++++ .|++ ||. ++.+++|+.|+|++ |+|++..|..++++++|+.|+|++|+|+|-.|..+.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 8985 999 99999999999996 99998888889999999999999999999989899999999999999
Q ss_pred CCCCCCcc
Q 004129 274 ESWLTNAA 281 (772)
Q Consensus 274 ~N~l~g~~ 281 (772)
+|.|++-.
T Consensus 89 ~N~l~~~~ 96 (347)
T 2ifg_A 89 FNALESLS 96 (347)
T ss_dssp SSCCSCCC
T ss_pred CCccceeC
Confidence 99999643
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.73 E-value=4.5e-09 Score=122.55 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=73.5
Q ss_pred CCCCceeeEEe--------CCCcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCC
Q 004129 156 VNPCSWFGVEC--------SDGKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFN 227 (772)
Q Consensus 156 ~~~C~w~Gv~C--------~~~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N 227 (772)
.+||.|+|..| ....++.|++++++|+ .||..+. ++|++|+|++|.++ .||. .+++|++|||++|
T Consensus 19 ~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N 91 (622)
T 3g06_A 19 APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGN 91 (622)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCC
Confidence 46889977532 2345778888888887 6777665 67888888888887 4665 5677888888888
Q ss_pred cCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCC
Q 004129 228 NFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 228 ~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
++++ ||. .+++|++|+|++|++++ +|. .+.+|+.|++++|.+++
T Consensus 92 ~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 92 QLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred cCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 8773 665 55677777777777665 443 34455555555555543
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.70 E-value=5.7e-09 Score=113.70 Aligned_cols=108 Identities=20% Similarity=0.170 Sum_probs=51.1
Q ss_pred EEEEEecCCCCcccCc----hhhcCCC-CCCEEEcccCcCcccCchhhcCC-----CCCCEeeccCCcCcccCCcccCC-
Q 004129 171 VVILNLRDLCLGGMLA----PELGQLS-ELKSIILRNNSFFGTIPKEIGEL-----KELEILDLGFNNFSGPFPSDFGN- 239 (772)
Q Consensus 171 v~~l~L~~~~l~G~ip----~~l~~l~-~L~~L~L~~N~l~G~iP~~l~~l-----~~L~~L~ls~N~l~G~iP~~l~~- 239 (772)
++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..++.+ ++|+.|||++|.+++..+..++.
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4555555555544433 3344444 45555555555554444444432 55555555555555444432222
Q ss_pred ---C-CCCCEEECccCCCcccCChhhcC-----CCCCCEEEcCCCCCC
Q 004129 240 ---S-FSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLT 278 (772)
Q Consensus 240 ---l-~~L~~L~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~N~l~ 278 (772)
+ ++|++|+|++|.+++..+..++. .++|+.|+|++|.++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 2 45555555555554443333221 235555555555554
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.66 E-value=7.1e-09 Score=112.94 Aligned_cols=107 Identities=14% Similarity=0.045 Sum_probs=57.7
Q ss_pred EEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCc----hhhcCCC-CCCEeeccCCcCcccCCcccCCC-----CCC
Q 004129 174 LNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIP----KEIGELK-ELEILDLGFNNFSGPFPSDFGNS-----FSL 243 (772)
Q Consensus 174 l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP----~~l~~l~-~L~~L~ls~N~l~G~iP~~l~~l-----~~L 243 (772)
.+|+.++++|.+|..+...++|++|+|++|.+++.-+ ..+.+++ +|+.|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555555555555555556666666666555444 4445555 56666666665555545444443 556
Q ss_pred CEEECccCCCcccCChhhcC----C-CCCCEEEcCCCCCCCc
Q 004129 244 TTLLLDNNQYLGGISPELHV----L-KVISEIQVDESWLTNA 280 (772)
Q Consensus 244 ~~L~l~~N~~~G~iP~~~~~----l-~~L~~l~l~~N~l~g~ 280 (772)
++|+|++|.+++..+..++. + ++|+.|+|++|.+++.
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGS
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcH
Confidence 66666666555554443332 2 5566666666655543
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=1.4e-09 Score=112.85 Aligned_cols=125 Identities=20% Similarity=0.128 Sum_probs=87.6
Q ss_pred CCCceeeEEeCCC--cEEEEEecC---CCCcccCchh------------------------hcCCCCCCE--EEcccCc-
Q 004129 157 NPCSWFGVECSDG--KVVILNLRD---LCLGGMLAPE------------------------LGQLSELKS--IILRNNS- 204 (772)
Q Consensus 157 ~~C~w~Gv~C~~~--~v~~l~L~~---~~l~G~ip~~------------------------l~~l~~L~~--L~L~~N~- 204 (772)
..|+|.|+.|+.+ +|+.+...+ ..+.|.+.++ +...+.|.. ++++.|.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 3589999999743 676665554 3344555431 111222332 4555663
Q ss_pred --CcccCchhhcCCCCCCEeeccCCcCcc--cCCcccCCCCCCCEEECccCCCcccCChhhcCCC--CCCEEEcCCCCCC
Q 004129 205 --FFGTIPKEIGELKELEILDLGFNNFSG--PFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLK--VISEIQVDESWLT 278 (772)
Q Consensus 205 --l~G~iP~~l~~l~~L~~L~ls~N~l~G--~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~--~L~~l~l~~N~l~ 278 (772)
+.+.++-.-.++++|+.|+||+|++++ .+|..+..+++|+.|+|++|++++- .++..++ +|+.|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 333333333568999999999999999 7888888999999999999999875 4455555 9999999999999
Q ss_pred Ccccc
Q 004129 279 NAASR 283 (772)
Q Consensus 279 g~~p~ 283 (772)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 87763
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.65 E-value=2.9e-08 Score=107.53 Aligned_cols=116 Identities=17% Similarity=0.138 Sum_probs=68.0
Q ss_pred CceeeEEeCCC-----------cEEEEEecCCCCcccCch-hhcCCCCCCEEEcccCcCcccCchh-hcCCCCCCE-eec
Q 004129 159 CSWFGVECSDG-----------KVVILNLRDLCLGGMLAP-ELGQLSELKSIILRNNSFFGTIPKE-IGELKELEI-LDL 224 (772)
Q Consensus 159 C~w~Gv~C~~~-----------~v~~l~L~~~~l~G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~-l~~l~~L~~-L~l 224 (772)
|.|..|.|++. .++.|+|++|.++. ||+ .+.+|++|++|+|++|.+.+.||.. +.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 78999999632 35566666666653 333 3566666666666666666666543 455555543 445
Q ss_pred cCCcCcccCCcccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCC
Q 004129 225 GFNNFSGPFPSDFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDES 275 (772)
Q Consensus 225 s~N~l~G~iP~~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N 275 (772)
+.|++++-.|..+.++++|++|++++|++++..+.......++..|++.++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 556666555555666666666666666665544444444445555555443
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.58 E-value=1.6e-07 Score=99.62 Aligned_cols=179 Identities=15% Similarity=0.181 Sum_probs=114.3
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCc--ccceeEEEEcCCC-ceEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKN--FVNLIGYCEEDEP-FTRMM 558 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpN--IV~l~g~~~~~~~-~~~~L 558 (772)
+..++.|....||+.. ..+++|..... .....+.+|+++|+.+. +.. +.++++.....+. ...|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence 4456788888999863 45777764321 23457889999998884 333 3344444332221 12478
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------ 602 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------------------------------------ 602 (772)
||||+++.+|.+... ..++..++..++.++++.++.||+.
T Consensus 94 vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999999988865331 2356666777778888877777751
Q ss_pred --------------------CCCeEeeCCCCCCeEECC--CCcEEEccccCccCCCCC-----Cccc---cchhhh----
Q 004129 603 --------------------TPPIAHRNLQSSSIYLTE--DYAAKISDFSFWNNTTAA-----KTGS---AAMELL---- 648 (772)
Q Consensus 603 --------------------~~~IvHrDLKp~NILld~--~~~~kL~DFGla~~~~~~-----~~~~---~apE~~---- 648 (772)
.+.++|+|+++.||++++ ...+.|.||+.+...... .... ..++..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 134899999999999988 556889999976432211 0000 122211
Q ss_pred cc-CCC---------CCCCcHHHHHHHHHHHHcCCCcc
Q 004129 649 ET-SAV---------DLESNVYSFGTILFEMITGRISY 676 (772)
Q Consensus 649 ~~-~~~---------s~ksDVwSfGvvL~ELltG~~P~ 676 (772)
.. +.. ....+.|++|.++|++.+|+.+|
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 10 111 11257899999999999998876
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.47 E-value=1.6e-08 Score=113.41 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=79.7
Q ss_pred CcEEEEEecCCCCccc----CchhhcCCCCCCEEEcccCcCcccCchhhcC-----CCCCCEeeccCCcCccc----CCc
Q 004129 169 GKVVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFFGTIPKEIGE-----LKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~~-----l~~L~~L~ls~N~l~G~----iP~ 235 (772)
.++..|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4677888888888764 6777777888888888888887654444432 25788888888887765 566
Q ss_pred ccCCCCCCCEEECccCCCcccCChhhcC-----CCCCCEEEcCCCCCCC
Q 004129 236 DFGNSFSLTTLLLDNNQYLGGISPELHV-----LKVISEIQVDESWLTN 279 (772)
Q Consensus 236 ~l~~l~~L~~L~l~~N~~~G~iP~~~~~-----l~~L~~l~l~~N~l~g 279 (772)
.+..+++|++|++++|.+++..+..+.. .++|+.|+|++|.+++
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6667778888888888777655554443 5678888888888775
No 395
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.42 E-value=3.6e-07 Score=98.84 Aligned_cols=106 Identities=12% Similarity=0.133 Sum_probs=88.9
Q ss_pred EEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCCcc-cCCCCCCCE-EECc
Q 004129 173 ILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFPSD-FGNSFSLTT-LLLD 249 (772)
Q Consensus 173 ~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP~~-l~~l~~L~~-L~l~ 249 (772)
.++-++++|+ .||..+ .++|++|+|++|.++. ||+ .+.++++|++|+|++|.+.+.+|.. +.++++|.. +.++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 4677888887 578766 3689999999999984 664 6899999999999999999989864 688888775 6777
Q ss_pred cCCCcccCChhhcCCCCCCEEEcCCCCCCCccc
Q 004129 250 NNQYLGGISPELHVLKVISEIQVDESWLTNAAS 282 (772)
Q Consensus 250 ~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~~p 282 (772)
.|++++-.|..+..+++|++|++++|.+++..+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCc
Confidence 899988778888999999999999999986543
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.38 E-value=9.4e-08 Score=99.01 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=68.4
Q ss_pred cCCCCCCEEEcccCcCcc--cCchhhcCCCCCCEeeccCCcCcccCCcccCCCC--CCCEEECccCCCcccCCh------
Q 004129 190 GQLSELKSIILRNNSFFG--TIPKEIGELKELEILDLGFNNFSGPFPSDFGNSF--SLTTLLLDNNQYLGGISP------ 259 (772)
Q Consensus 190 ~~l~~L~~L~L~~N~l~G--~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~--~L~~L~l~~N~~~G~iP~------ 259 (772)
.++++|+.|+|++|.+++ .+|..+..+++|+.|||++|.+++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999999 7888889999999999999999985 3344444 999999999999999883
Q ss_pred -hhcCCCCCCEEE
Q 004129 260 -ELHVLKVISEIQ 271 (772)
Q Consensus 260 -~~~~l~~L~~l~ 271 (772)
-+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356788888875
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.38 E-value=3.6e-08 Score=110.56 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=94.2
Q ss_pred CcEEEEEecCCCCccc----Cchhh-cCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCcccCCcccC-
Q 004129 169 GKVVILNLRDLCLGGM----LAPEL-GQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGPFPSDFG- 238 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~----ip~~l-~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~- 238 (772)
..++.|+|++|.+++. +.+.+ ..+++|++|+|++|.+++. +|..+.++++|+.|||++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 5688999999998764 22333 3689999999999999875 788888999999999999999876554443
Q ss_pred ----CCCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 239 ----NSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 239 ----~l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
..++|+.|++++|.+++. +|..+..+++|+.|+|++|.+++..+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 236999999999999876 677888899999999999999876443
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.35 E-value=1.8e-07 Score=102.21 Aligned_cols=111 Identities=16% Similarity=0.087 Sum_probs=65.5
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccCcCcccCchhh-----cCCCCCCEeeccCCcCcc----cCCcccC
Q 004129 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNNSFFGTIPKEI-----GELKELEILDLGFNNFSG----PFPSDFG 238 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N~l~G~iP~~l-----~~l~~L~~L~ls~N~l~G----~iP~~l~ 238 (772)
..++.|+|++|.++..-...+. .+.+|+.|+|++|.++..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3577777777776543222222 24466777777777754433332 235667777777777654 2344445
Q ss_pred CCCCCCEEECccCCCcc----cCChhhcCCCCCCEEEcCCCCCCC
Q 004129 239 NSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTN 279 (772)
Q Consensus 239 ~l~~L~~L~l~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l~g 279 (772)
.+++|++|+|++|.++. .++..+...++|+.|+|++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 66667777777777653 234455556677777777777664
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.31 E-value=2.5e-06 Score=91.06 Aligned_cols=130 Identities=12% Similarity=0.211 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCC----CcccceeEEEEcCCCceEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNH----KNFVNLIGYCEEDEPFTRMM 558 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~H----pNIV~l~g~~~~~~~~~~~L 558 (772)
+..++.|....||+. +..+++|.... ......+.+|.++|..+.+ -.+.+++++ + ..++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~---~~~l 104 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKR-------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---S---DRFN 104 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---C---SSCE
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCc-------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---C---CcEE
Confidence 456778889999998 56677776532 1123458899999988866 223445544 2 2479
Q ss_pred EEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 004129 559 VFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLT----------------------------------- 603 (772)
Q Consensus 559 V~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~----------------------------------- 603 (772)
||||+++.++..... ..++..++..++.++++.++.||+..
T Consensus 105 vme~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 105 IMKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EEECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999999988864321 23556666677777777777777432
Q ss_pred --------------------------CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 604 --------------------------PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 --------------------------~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
+.++|+|+++.|||++++..+.|.||+.+.
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~ 236 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN 236 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccc
Confidence 235999999999999987667999999764
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.22 E-value=3.8e-06 Score=88.31 Aligned_cols=137 Identities=17% Similarity=0.245 Sum_probs=88.7
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCC---cccceeEEEEcCCCceEEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp---NIV~l~g~~~~~~~~~~~LV 559 (772)
+..++.|.++.||++...+|..++||+...... .....|.+|++.|+.++|. .+.+++++. . .++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---~---~~lv 88 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAP-----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---D---RTLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---T---TEEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCc-----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec---C---cEEE
Confidence 456788999999999988899999998543211 1124689999999999875 477777753 2 3899
Q ss_pred EecCCCCChhh-----------hhhhhccC-------------------CCCHHHHH---HH-----------------H
Q 004129 560 FEYSPNGSLFE-----------HLHIQEAE-------------------HLDWAMRL---RI-----------------A 589 (772)
Q Consensus 560 ~Ey~~~GsL~~-----------~L~~~~~~-------------------~l~~~~~~---~I-----------------a 589 (772)
|||++++.+.. .||..... .-+|.... ++ .
T Consensus 89 me~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~ 168 (288)
T 3d1u_A 89 MEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDV 168 (288)
T ss_dssp EECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHH
T ss_pred EEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999987532 12321110 02343221 00 1
Q ss_pred HHHHHHHHHH-----hcCCCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 590 MGMAYCLEHM-----HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 590 ~~ia~gL~yL-----H~~~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
..+.+.++.+ +...+.++|+|+.+.||++++ +.+.|.|| .+
T Consensus 169 ~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~ 214 (288)
T 3d1u_A 169 RLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AA 214 (288)
T ss_dssp HHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CC
T ss_pred HHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-Cc
Confidence 1111222222 233467999999999999988 45889999 54
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.14 E-value=4.5e-07 Score=99.07 Aligned_cols=111 Identities=13% Similarity=0.127 Sum_probs=79.2
Q ss_pred cEEEEEecCCCCcccCchhh-----cCCCCCCEEEcccCcCcc----cCchhhcCCCCCCEeeccCCcCcc----cCCcc
Q 004129 170 KVVILNLRDLCLGGMLAPEL-----GQLSELKSIILRNNSFFG----TIPKEIGELKELEILDLGFNNFSG----PFPSD 236 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l-----~~l~~L~~L~L~~N~l~G----~iP~~l~~l~~L~~L~ls~N~l~G----~iP~~ 236 (772)
+++.|+|++|.++..-...+ ...+.|++|+|++|.++. .++..+..+++|++|||++|.++. .++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 57788888888865433333 246778888888888864 356666778888888888888865 23455
Q ss_pred cCCCCCCCEEECccCCCcc----cCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 237 FGNSFSLTTLLLDNNQYLG----GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 237 l~~l~~L~~L~l~~N~~~G----~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+...++|+.|+|++|.++. .++..+...+.|+.|+|++|.++..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 6667788888888888764 3444555677888888888877643
No 402
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=1.7e-05 Score=84.11 Aligned_cols=135 Identities=14% Similarity=0.115 Sum_probs=85.8
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCC---cccceeEEEEcCCCceEEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp---NIV~l~g~~~~~~~~~~~LV 559 (772)
+..++.|....||+. +..+++|+... ......+.+|+++|..+.+. .+.+.+.++..... ..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEE
Confidence 345667888899987 56677776321 12345789999999999653 25566666653222 46899
Q ss_pred EecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 004129 560 FEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQ-------------------------------------- 601 (772)
Q Consensus 560 ~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~-------------------------------------- 601 (772)
|||++|..+.+... ..++...+..++.++++.|+.||+
T Consensus 92 ~e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~ 167 (306)
T 3tdw_A 92 YRKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDES 167 (306)
T ss_dssp EECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHH
T ss_pred EeccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchh
Confidence 99999987765211 112233333333333333333332
Q ss_pred --------------------CCCCeEeeCCCCCCeEECC---CCc-EEEccccCcc
Q 004129 602 --------------------LTPPIAHRNLQSSSIYLTE---DYA-AKISDFSFWN 633 (772)
Q Consensus 602 --------------------~~~~IvHrDLKp~NILld~---~~~-~kL~DFGla~ 633 (772)
..+.++|+|+++.|||++. ++. ..|.||+.+.
T Consensus 168 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 168 LRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred hHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2235799999999999987 455 5899998754
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.09 E-value=6.5e-07 Score=103.63 Aligned_cols=111 Identities=11% Similarity=0.058 Sum_probs=63.4
Q ss_pred cEEEEEecCCCCcccCchhhcC-CCCCCEEEcc----cCcCccc-----CchhhcCCCCCCEeeccC--CcCcccCCccc
Q 004129 170 KVVILNLRDLCLGGMLAPELGQ-LSELKSIILR----NNSFFGT-----IPKEIGELKELEILDLGF--NNFSGPFPSDF 237 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~~-l~~L~~L~L~----~N~l~G~-----iP~~l~~l~~L~~L~ls~--N~l~G~iP~~l 237 (772)
++..|+|..+.+++..+..++. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++ |.+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 4556666666666666555554 6666777664 5556552 444455566666666653 23555444444
Q ss_pred CC-CCCCCEEECccCCCcc-cCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 238 GN-SFSLTTLLLDNNQYLG-GISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 238 ~~-l~~L~~L~l~~N~~~G-~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
+. +++|+.|++++|++++ .++..+..+++|+.|+|++|.+++.
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 32 5566666666666655 3444445566666666666665543
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.05 E-value=1.1e-06 Score=86.03 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=87.5
Q ss_pred CcEEEEEecCC-CCccc----CchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CCc
Q 004129 169 GKVVILNLRDL-CLGGM----LAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FPS 235 (772)
Q Consensus 169 ~~v~~l~L~~~-~l~G~----ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~ 235 (772)
..++.|+|++| .++.. +...+...+.|++|+|++|.++.. +...+...+.|+.|||++|.++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46789999998 88743 556677789999999999999643 555667778999999999999864 456
Q ss_pred ccCCCCCCCEEEC--ccCCCccc----CChhhcCCCCCCEEEcCCCCCC
Q 004129 236 DFGNSFSLTTLLL--DNNQYLGG----ISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 236 ~l~~l~~L~~L~l--~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
.+...++|++|+| ++|.+... +-..+...+.|+.|+|++|.++
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6777889999999 88998754 3445566789999999999875
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.96 E-value=3.9e-05 Score=79.23 Aligned_cols=125 Identities=11% Similarity=0.139 Sum_probs=82.1
Q ss_pred EEEEEEEc-CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCceEEEEEecCCCCChhh
Q 004129 493 TVYKGTLS-SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFE 570 (772)
Q Consensus 493 ~Vykg~~~-~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~ 570 (772)
.||+.... ++..+++|..... ...++.+|...|+.+. +--+-++++++.+.+ ..++|||++++.++.+
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~~--------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKGS--------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEETH--------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCCSEEHHH
T ss_pred eEEEEEecCCCeEEEEEECCCC--------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEEeeCCccccc
Confidence 68987754 4556778765321 2346888999988874 333667888888776 6799999999887765
Q ss_pred hhhhhccCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 004129 571 HLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQL------------------------------------------------ 602 (772)
Q Consensus 571 ~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~------------------------------------------------ 602 (772)
..... ......++.+++..|.-||..
T Consensus 110 ~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 110 VLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred cccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 43210 011122333444444444421
Q ss_pred --------CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 603 --------TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 --------~~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
.+.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137999999999999988777899998643
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.91 E-value=3.2e-05 Score=84.03 Aligned_cols=140 Identities=11% Similarity=0.112 Sum_probs=86.2
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc--ccceeEEEEcCCCceEEEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN--FVNLIGYCEEDEPFTRMMVF 560 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN--IV~l~g~~~~~~~~~~~LV~ 560 (772)
+..++.|....+|+... ++..+++|..... ..+.+|+.++..+.... +.++++++..... ..++||
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g-~~~lv~ 113 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES-LTYCIS 113 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC----------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS-CEEEEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch----------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC-CeEEEE
Confidence 44566788889999876 4677888765321 24788888888886533 5567777765432 579999
Q ss_pred ecCCCCChhhh------------------hhhhccC---------------CCCHHHH---------------------H
Q 004129 561 EYSPNGSLFEH------------------LHIQEAE---------------HLDWAMR---------------------L 586 (772)
Q Consensus 561 Ey~~~GsL~~~------------------L~~~~~~---------------~l~~~~~---------------------~ 586 (772)
||+++..+.+. ||..... .-.|... .
T Consensus 114 e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~ 193 (362)
T 3ovc_A 114 RRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSA 193 (362)
T ss_dssp ECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99997655421 1111000 0012111 0
Q ss_pred HHHHHHHHHHHHHhcC--CCCeEeeCCCCCCeEECCCCcEEEccccCccC
Q 004129 587 RIAMGMAYCLEHMHQL--TPPIAHRNLQSSSIYLTEDYAAKISDFSFWNN 634 (772)
Q Consensus 587 ~Ia~~ia~gL~yLH~~--~~~IvHrDLKp~NILld~~~~~kL~DFGla~~ 634 (772)
.....+...++++... .+.++|+|+.+.|||++++..+.|.||+.+..
T Consensus 194 ~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 194 SVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1112222233333221 24689999999999998877788999987643
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.87 E-value=3e-06 Score=98.04 Aligned_cols=108 Identities=10% Similarity=0.031 Sum_probs=51.2
Q ss_pred EEEEEecCCCCccc----CchhhcCCCCCCEEEcccCcCc----ccCchhhcCCCCCCEeeccCCcCcccCCc-------
Q 004129 171 VVILNLRDLCLGGM----LAPELGQLSELKSIILRNNSFF----GTIPKEIGELKELEILDLGFNNFSGPFPS------- 235 (772)
Q Consensus 171 v~~l~L~~~~l~G~----ip~~l~~l~~L~~L~L~~N~l~----G~iP~~l~~l~~L~~L~ls~N~l~G~iP~------- 235 (772)
+..|+|+++.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|.
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 44455555544433 3333344455555555555554 2344444445555555555554443 333
Q ss_pred --------------------ccCCCCCCCEEECccCCCcccCChhhcCCCCCCEEEcCCCCCCCc
Q 004129 236 --------------------DFGNSFSLTTLLLDNNQYLGGISPELHVLKVISEIQVDESWLTNA 280 (772)
Q Consensus 236 --------------------~l~~l~~L~~L~l~~N~~~G~iP~~~~~l~~L~~l~l~~N~l~g~ 280 (772)
.+..+++|+.|+++++ ..+.+|..+..+++|+.|+|++|.+++.
T Consensus 245 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~ 308 (592)
T 3ogk_B 245 LEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETE 308 (592)
T ss_dssp CCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHH
T ss_pred HHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHH
Confidence 3334444444444432 2344555555556666666666655543
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.77 E-value=6.4e-05 Score=81.12 Aligned_cols=85 Identities=7% Similarity=-0.013 Sum_probs=52.2
Q ss_pred ccc-cccceEEEEEEEEc-------CCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-C--CcccceeEEEEcCC
Q 004129 484 GSF-SDGTVGTVYKGTLS-------SGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-H--KNFVNLIGYCEEDE 552 (772)
Q Consensus 484 g~l-g~G~fg~Vykg~~~-------~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-H--pNIV~l~g~~~~~~ 552 (772)
..+ +.|....+|+.... ++..+++|........... ....+.+|+.+++.++ + -.+.++++++.+.+
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~--~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF--PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS--SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC--chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 445 67888899998764 2567777765432100000 0124677888888774 2 34677888776542
Q ss_pred C-ceEEEEEecCCCCChhh
Q 004129 553 P-FTRMMVFEYSPNGSLFE 570 (772)
Q Consensus 553 ~-~~~~LV~Ey~~~GsL~~ 570 (772)
. ...++||||+++..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 1 13589999999877653
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.58 E-value=8.1e-06 Score=94.32 Aligned_cols=112 Identities=8% Similarity=-0.027 Sum_probs=76.9
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcc--c----CcCcc-----cCchhhcCCCCCCEeeccCCcCcccCCcc
Q 004129 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILR--N----NSFFG-----TIPKEIGELKELEILDLGFNNFSGPFPSD 236 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~--~----N~l~G-----~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 236 (772)
.++..|.+..+++++.....+. .+++|+.|+|+ + |.+++ .++.-+.++++|+.|+|++ ++++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3466677777888776666665 47888888888 3 45552 3444466778888888866 666655555
Q ss_pred cCC-CCCCCEEECccCCCcccCChhh-cCCCCCCEEEcCCCCCCCcc
Q 004129 237 FGN-SFSLTTLLLDNNQYLGGISPEL-HVLKVISEIQVDESWLTNAA 281 (772)
Q Consensus 237 l~~-l~~L~~L~l~~N~~~G~iP~~~-~~l~~L~~l~l~~N~l~g~~ 281 (772)
++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 655 7778888888888776555555 56788888888888875543
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.57 E-value=2.8e-05 Score=75.90 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=77.9
Q ss_pred cCchhhcCCCCCCEEEcccC-cCccc----CchhhcCCCCCCEeeccCCcCccc----CCcccCCCCCCCEEECccCCCc
Q 004129 184 MLAPELGQLSELKSIILRNN-SFFGT----IPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYL 254 (772)
Q Consensus 184 ~ip~~l~~l~~L~~L~L~~N-~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l~~l~~L~~L~l~~N~~~ 254 (772)
.+...+...+.|++|+|++| .++.. +...+...++|+.|||++|.+... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 45556778999999999999 88743 556677889999999999999753 3344556688999999999987
Q ss_pred cc----CChhhcCCCCCCEEEc--CCCCCCCc
Q 004129 255 GG----ISPELHVLKVISEIQV--DESWLTNA 280 (772)
Q Consensus 255 G~----iP~~~~~l~~L~~l~l--~~N~l~g~ 280 (772)
.. +...+...+.|+.|+| ++|.++..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 53 5567778899999999 88988753
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.54 E-value=3.9e-05 Score=88.52 Aligned_cols=113 Identities=11% Similarity=0.099 Sum_probs=86.5
Q ss_pred CcEEEEEecCCCCcccCchhhc-CCCCCCEEEcccC-cCccc-CchhhcCCCCCCEeeccCCcCcccCCccc----CCCC
Q 004129 169 GKVVILNLRDLCLGGMLAPELG-QLSELKSIILRNN-SFFGT-IPKEIGELKELEILDLGFNNFSGPFPSDF----GNSF 241 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~-~l~~L~~L~L~~N-~l~G~-iP~~l~~l~~L~~L~ls~N~l~G~iP~~l----~~l~ 241 (772)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 5788999999999888777776 6899999999999 55543 66666689999999999999887654433 3677
Q ss_pred CCCEEECccCCCcccCC-----hhhcCCCCCCEEEcCCCCCCCcccc
Q 004129 242 SLTTLLLDNNQYLGGIS-----PELHVLKVISEIQVDESWLTNAASR 283 (772)
Q Consensus 242 ~L~~L~l~~N~~~G~iP-----~~~~~l~~L~~l~l~~N~l~g~~p~ 283 (772)
+|+.|++++|. +.++ .-+..+++|+.|+|++|..-+.+|.
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~ 229 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLAT 229 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHH
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHH
Confidence 99999999987 3333 2234579999999998843333443
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.53 E-value=0.00043 Score=73.69 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=27.0
Q ss_pred CCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 603 TPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 603 ~~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
.+.++|+|+++.|||++.++.+.|.||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 3469999999999999888899999998643
No 413
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.50 E-value=0.00057 Score=71.34 Aligned_cols=75 Identities=16% Similarity=0.276 Sum_probs=51.7
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCC---cccceeEEEEcCCCceEEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK---NFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp---NIV~l~g~~~~~~~~~~~LV 559 (772)
+..+|.|..+.||+.+..+|+.+.||+....... ....|..|++.|+.+.-. -+.+++++ +.. ++|
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~~----~lv 88 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGW--DDR----TLA 88 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ETT----EEE
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEec--cCc----eEE
Confidence 4667889999999999999999999975432211 123578899988888422 23444443 222 789
Q ss_pred EecCCCCCh
Q 004129 560 FEYSPNGSL 568 (772)
Q Consensus 560 ~Ey~~~GsL 568 (772)
|||++.+..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987654
No 414
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.42 E-value=0.00039 Score=76.13 Aligned_cols=80 Identities=10% Similarity=0.036 Sum_probs=46.7
Q ss_pred cccccccceEEEEEEEEc-CCcEEEEEEeeeccc-c-hhhhhHHHHHHHHHHHHhccCC--Ccc-cceeEEEEcCCCceE
Q 004129 483 IGSFSDGTVGTVYKGTLS-SGVEIAVTSTSVKSR-A-DWSKNLESQFRKKIDTLSKVNH--KNF-VNLIGYCEEDEPFTR 556 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~-~~~~vaVK~~~~~~~-~-~~~~~~~~~f~~Ei~~L~~l~H--pNI-V~l~g~~~~~~~~~~ 556 (772)
+..+|.|..+.||+++.. +++.++||....... . ........++..|.+++..+.. +.. .+++.+. .+ ..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--cc
Confidence 456788999999999754 467888987543221 0 0000112356778888887732 443 4555442 23 23
Q ss_pred EEEEecCCCC
Q 004129 557 MMVFEYSPNG 566 (772)
Q Consensus 557 ~LV~Ey~~~G 566 (772)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999763
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.23 E-value=5.1e-05 Score=82.29 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=71.2
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCcCcccCchhhc--CCCCCCEeeccC--CcCccc--C---Cccc--
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNSFFGTIPKEIG--ELKELEILDLGF--NNFSGP--F---PSDF-- 237 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~l~G~iP~~l~--~l~~L~~L~ls~--N~l~G~--i---P~~l-- 237 (772)
.++..|+|+++. .-.+++ + .+++|+.|+|..+.++...-..++ .+++|+.|+|+. |...|. + -..+
T Consensus 172 P~L~~L~L~g~~-~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTN-NLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCB-TCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCC-Cceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 467788887762 113343 3 378888888888877655444554 688888888853 332222 1 1112
Q ss_pred CCCCCCCEEECccCCCcccCChhhc---CCCCCCEEEcCCCCCCCc
Q 004129 238 GNSFSLTTLLLDNNQYLGGISPELH---VLKVISEIQVDESWLTNA 280 (772)
Q Consensus 238 ~~l~~L~~L~l~~N~~~G~iP~~~~---~l~~L~~l~l~~N~l~g~ 280 (772)
..+++|++|+|.+|.+.+..+..+. .+++|+.|+|+.|.+++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3477888888888887765544443 467888888888888764
No 416
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.08 E-value=0.004 Score=65.83 Aligned_cols=136 Identities=17% Similarity=0.230 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC---CCcccceeEEEEcCCCceEEEE
Q 004129 483 IGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN---HKNFVNLIGYCEEDEPFTRMMV 559 (772)
Q Consensus 483 ig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~---HpNIV~l~g~~~~~~~~~~~LV 559 (772)
+..++.|....+|+.... +..+++|..... ....|..|.+.|+.+. ...+.++++++...+ ..++|
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lv 109 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLL 109 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEE
Confidence 345677888899998864 567788765421 1356888988888883 356888888887655 67999
Q ss_pred EecCCCCChhh-----------hhhhhcc-C-------------------CCCHHHHH---HHHHH--------------
Q 004129 560 FEYSPNGSLFE-----------HLHIQEA-E-------------------HLDWAMRL---RIAMG-------------- 591 (772)
Q Consensus 560 ~Ey~~~GsL~~-----------~L~~~~~-~-------------------~l~~~~~~---~Ia~~-------------- 591 (772)
|||+++..+.. .||.... . .-+|.... ++..+
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999876521 1232111 0 12465321 11111
Q ss_pred --HH-HHHHHH--hcCCCCeEeeCCCCCCeEECCCCcEEEcccc
Q 004129 592 --MA-YCLEHM--HQLTPPIAHRNLQSSSIYLTEDYAAKISDFS 630 (772)
Q Consensus 592 --ia-~gL~yL--H~~~~~IvHrDLKp~NILld~~~~~kL~DFG 630 (772)
+. .....| |...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 112334 23356799999999999999887 8899974
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.82 E-value=0.00072 Score=73.18 Aligned_cols=109 Identities=12% Similarity=0.099 Sum_probs=54.2
Q ss_pred cEEEEEecCCCCcccCchhhc--CCCCCCEEEccc--CcCccc-----Cchhh--cCCCCCCEeeccCCcCcccCCccc-
Q 004129 170 KVVILNLRDLCLGGMLAPELG--QLSELKSIILRN--NSFFGT-----IPKEI--GELKELEILDLGFNNFSGPFPSDF- 237 (772)
Q Consensus 170 ~v~~l~L~~~~l~G~ip~~l~--~l~~L~~L~L~~--N~l~G~-----iP~~l--~~l~~L~~L~ls~N~l~G~iP~~l- 237 (772)
++..|+|..++++...-..++ .+++|+.|+|+. |...|. +-..+ ..+++|++|+|++|.+.+..+..+
T Consensus 194 ~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la 273 (362)
T 2ra8_A 194 NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273 (362)
T ss_dssp TCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHH
T ss_pred CCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHH
Confidence 455555555554433223333 566666666642 221111 11111 235666666666666654333222
Q ss_pred --CCCCCCCEEECccCCCccc----CChhhcCCCCCCEEEcCCCCCC
Q 004129 238 --GNSFSLTTLLLDNNQYLGG----ISPELHVLKVISEIQVDESWLT 278 (772)
Q Consensus 238 --~~l~~L~~L~l~~N~~~G~----iP~~~~~l~~L~~l~l~~N~l~ 278 (772)
..+++|++|+|+.|.+.+. ++..+.++++|+.|+|+.|.++
T Consensus 274 ~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 274 ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 2355666666666666542 3333345566666666666555
No 418
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.81 E-value=0.0022 Score=68.12 Aligned_cols=82 Identities=21% Similarity=0.190 Sum_probs=59.9
Q ss_pred CCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCC-cccCCCCCCC-EEECccCCCcccCC-hhhcCCCCC
Q 004129 192 LSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFP-SDFGNSFSLT-TLLLDNNQYLGGIS-PELHVLKVI 267 (772)
Q Consensus 192 l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~-~L~l~~N~~~G~iP-~~~~~l~~L 267 (772)
+++|+.|+|++|+++ .||. .+.+|++|+.|+|++| +. .|+ ..+.+|.+|+ .+++.+ +++ .|+ ..+..+.+|
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L 299 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNL 299 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccC
Confidence 678888888888877 4544 5777888888888887 54 344 4577888888 888877 443 333 566778888
Q ss_pred CEEEcCCCCCC
Q 004129 268 SEIQVDESWLT 278 (772)
Q Consensus 268 ~~l~l~~N~l~ 278 (772)
+.++++.|.++
T Consensus 300 ~~l~l~~n~i~ 310 (329)
T 3sb4_A 300 RYVLATGDKIT 310 (329)
T ss_dssp EEEEECSSCCC
T ss_pred CEEEeCCCccC
Confidence 88888888776
No 419
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.59 E-value=0.0068 Score=63.90 Aligned_cols=157 Identities=10% Similarity=0.151 Sum_probs=84.1
Q ss_pred CCCHHHHHHHhhccc--c--ccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCc-
Q 004129 466 KLKRSELEAACEDFS--N--IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKN- 540 (772)
Q Consensus 466 ~~~~~el~~~~~~f~--~--iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpN- 540 (772)
.++.+++......|. + -+..++.|....+|+....++ .+++|....... ...+..|+.++..++...
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-------~~~l~~e~~~l~~L~~~g~ 77 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-------KNDLPFFLGLMQHLAAKGL 77 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-------HHHHHHHHHHHHHHHHCCC
Confidence 455667776666553 1 234456677789999987666 577777653211 123556666666653212
Q ss_pred -ccceeEE------EEcCCCceEEEEEecCCCCChhh--------------hhhhhc----cC---C---CCHHHHHH--
Q 004129 541 -FVNLIGY------CEEDEPFTRMMVFEYSPNGSLFE--------------HLHIQE----AE---H---LDWAMRLR-- 587 (772)
Q Consensus 541 -IV~l~g~------~~~~~~~~~~LV~Ey~~~GsL~~--------------~L~~~~----~~---~---l~~~~~~~-- 587 (772)
+.+++.. ....+ ..++++||+++..+.. .+|... .. . ..|.....
T Consensus 78 ~vP~~~~~~~g~~~~~~~g--~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~ 155 (322)
T 2ppq_A 78 SCPLPLPRKDGELLGELSG--RPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKS 155 (322)
T ss_dssp CCCCBCCBTTCCSCEEETT--EEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHH
T ss_pred CCCcccCCCCCCEEEEECC--EEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHH
Confidence 2233311 11122 4689999998865421 122110 00 0 12332111
Q ss_pred ----------HHHHHHHHHHHHhcC-----CCCeEeeCCCCCCeEECCCCcEEEccccCc
Q 004129 588 ----------IAMGMAYCLEHMHQL-----TPPIAHRNLQSSSIYLTEDYAAKISDFSFW 632 (772)
Q Consensus 588 ----------Ia~~ia~gL~yLH~~-----~~~IvHrDLKp~NILld~~~~~kL~DFGla 632 (772)
+...+.+.++++++. .+.++|+|+.+.|||++++..+.|.||+.+
T Consensus 156 ~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 156 EERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp GGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 111244455555421 235999999999999998766689999864
No 420
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.54 E-value=0.002 Score=67.59 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=24.0
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
+.++|+|+.+.||+ ..++.+.|.||..+.
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 35899999999999 556678999998654
No 421
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.34 E-value=0.013 Score=62.26 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=25.9
Q ss_pred CCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004129 604 PPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~----~~~kL~DFGla~ 633 (772)
+.++|||+.+.|||++.+ ..+.|.||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 469999999999999874 689999998754
No 422
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.27 E-value=0.0063 Score=64.54 Aligned_cols=80 Identities=13% Similarity=0.136 Sum_probs=51.5
Q ss_pred CCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCc-ccCCCCCCCEEECccCCCcccCCh-hhcCCCCCC-
Q 004129 192 LSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPS-DFGNSFSLTTLLLDNNQYLGGISP-ELHVLKVIS- 268 (772)
Q Consensus 192 l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~-~l~~l~~L~~L~l~~N~~~G~iP~-~~~~l~~L~- 268 (772)
+.+++.+.+.++-....+......|++|+.|+|++|+++ .||. .+.+|.+|+.++|.+| +. .|++ .+.++.+|+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAG 277 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccE
Confidence 456667766655333222222223778888888888777 4553 4777888888888877 33 3544 466778888
Q ss_pred EEEcCC
Q 004129 269 EIQVDE 274 (772)
Q Consensus 269 ~l~l~~ 274 (772)
.+++..
T Consensus 278 ~l~l~~ 283 (329)
T 3sb4_A 278 TLELPA 283 (329)
T ss_dssp EEEECT
T ss_pred EEEEcc
Confidence 888876
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.23 E-value=0.013 Score=64.61 Aligned_cols=69 Identities=14% Similarity=0.135 Sum_probs=42.1
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCC----------ccccchhhhccC---CCCCCCcHHHHHHHHHHHH
Q 004129 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAK----------TGSAAMELLETS---AVDLESNVYSFGTILFEMI 670 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~~~----------~~~~apE~~~~~---~~s~ksDVwSfGvvL~ELl 670 (772)
+.++|+|+++.|||++.++ ++|.||+.+....... ..|.+++..... .-....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999998876 9999998765432210 012233322110 0111244557778888877
Q ss_pred cCC
Q 004129 671 TGR 673 (772)
Q Consensus 671 tG~ 673 (772)
+++
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.92 E-value=0.037 Score=58.29 Aligned_cols=157 Identities=9% Similarity=0.043 Sum_probs=83.8
Q ss_pred CCCHHHHHHHhhccc-c---ccccccccceEEEEEEEEcCCcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCC--
Q 004129 466 KLKRSELEAACEDFS-N---IIGSFSDGTVGTVYKGTLSSGVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHK-- 539 (772)
Q Consensus 466 ~~~~~el~~~~~~f~-~---iig~lg~G~fg~Vykg~~~~~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~Hp-- 539 (772)
.++.+++....+.+. . -+..++ |....||+....+|+.+++|....... ....+..|..++..+...
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~~~~~~~E~~~~~~L~~~g~ 82 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDEV 82 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC------CHHHHHHHHHHHHHHHHcCC
Confidence 455566665555442 1 122344 666689998877777788887652211 123456677777766321
Q ss_pred cccceeEE-----EEcCCCceEEEEEecCCCCChhh-----h---------hhhhc-------cCCCCHHHH----HHH-
Q 004129 540 NFVNLIGY-----CEEDEPFTRMMVFEYSPNGSLFE-----H---------LHIQE-------AEHLDWAMR----LRI- 588 (772)
Q Consensus 540 NIV~l~g~-----~~~~~~~~~~LV~Ey~~~GsL~~-----~---------L~~~~-------~~~l~~~~~----~~I- 588 (772)
.+.+++.. ....+ ..++||||+++..+.. + +|... ....++... ..+
T Consensus 83 ~vp~~~~~~g~~~~~~~g--~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (328)
T 1zyl_A 83 PVAAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF 160 (328)
T ss_dssp SBCCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHH
T ss_pred eecceeecCCcEEEEECC--EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHH
Confidence 23444443 11122 4578999998754421 0 12110 011232211 001
Q ss_pred --------------HHHHHHHHHHHhc-----CCCCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 589 --------------AMGMAYCLEHMHQ-----LTPPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 589 --------------a~~ia~gL~yLH~-----~~~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
...+.+.++.+.+ ..+.++|+|+++.|||++ + .+.|.||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 161 EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1111122333321 233589999999999999 4 89999998654
No 425
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.80 E-value=0.061 Score=59.86 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=44.0
Q ss_pred ccccccceEEEEEEEEcC-CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcc-cceeEEEEcCCCceEEEEEe
Q 004129 484 GSFSDGTVGTVYKGTLSS-GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPFTRMMVFE 561 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~~-~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNI-V~l~g~~~~~~~~~~~LV~E 561 (772)
..++.|-...+|+....+ +..+++|+..... .... +-.+|..++..+...++ .++++++ .+ .+|||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~i-----dR~~E~~vl~~L~~~gl~P~ll~~~--~~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEII-----NREREKKISCILYNKNIAKKIYVFF--TN----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCS-----CHHHHHHHHHHHTTSSSBCCEEEEE--TT----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhc-----CHHHHHHHHHHHHhcCCCCCEEEEe--CC----eEEEE
Confidence 455567778999998765 4677777653221 1100 12478888888864444 4667665 22 35999
Q ss_pred cCCCCCh
Q 004129 562 YSPNGSL 568 (772)
Q Consensus 562 y~~~GsL 568 (772)
|+++..|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987544
No 426
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.78 E-value=0.024 Score=61.52 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=75.6
Q ss_pred cccccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccC-CCcccceeEEEEcCCCce
Q 004129 485 SFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVN-HKNFVNLIGYCEEDEPFT 555 (772)
Q Consensus 485 ~lg~G~fg~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~-HpNIV~l~g~~~~~~~~~ 555 (772)
.+..|....+|+....+ +..+++|+..... . ....+.+|.++++.+. +.-..++++++. +
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~-----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-Q-----GVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----C-----CHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-c-----hHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 34446666889988642 4678887753211 0 1234568888888774 322355665543 2
Q ss_pred EEEEEecCCCCChhhh-----------------hhhhc---cCCCC--HHHHHHHHHHHH-------------------H
Q 004129 556 RMMVFEYSPNGSLFEH-----------------LHIQE---AEHLD--WAMRLRIAMGMA-------------------Y 594 (772)
Q Consensus 556 ~~LV~Ey~~~GsL~~~-----------------L~~~~---~~~l~--~~~~~~Ia~~ia-------------------~ 594 (772)
.+||||+++..|..- ||... ..... |.+..++..++. .
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 289999987655311 11110 11122 344444443332 1
Q ss_pred HHHHH----hc--CCCCeEeeCCCCCCeEECCC----CcEEEccccCcc
Q 004129 595 CLEHM----HQ--LTPPIAHRNLQSSSIYLTED----YAAKISDFSFWN 633 (772)
Q Consensus 595 gL~yL----H~--~~~~IvHrDLKp~NILld~~----~~~kL~DFGla~ 633 (772)
.++.| .. ....++|+|+.+.|||++.+ +.+.|.||..+.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 23333 22 22358999999999999876 789999998653
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.75 E-value=0.024 Score=62.58 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=45.3
Q ss_pred ccccccceEEEEEEEEcC--------CcEEEEEEeeecccchhhhhHHHHHHHHHHHHhccCCCcc-cceeEEEEcCCCc
Q 004129 484 GSFSDGTVGTVYKGTLSS--------GVEIAVTSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNF-VNLIGYCEEDEPF 554 (772)
Q Consensus 484 g~lg~G~fg~Vykg~~~~--------~~~vaVK~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNI-V~l~g~~~~~~~~ 554 (772)
..++.|....||+....+ +..+++|+..... . ...+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----T---ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----C---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----c---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 445567778999998753 4678887763211 0 1245578888888743334 56666542 2
Q ss_pred eEEEEEecCCCCCh
Q 004129 555 TRMMVFEYSPNGSL 568 (772)
Q Consensus 555 ~~~LV~Ey~~~GsL 568 (772)
.+|+||+++.+|
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.59 E-value=0.007 Score=58.08 Aligned_cols=34 Identities=9% Similarity=0.024 Sum_probs=15.4
Q ss_pred CCCEEECccCC-CcccCChhhcCCCCCCEEEcCCC
Q 004129 242 SLTTLLLDNNQ-YLGGISPELHVLKVISEIQVDES 275 (772)
Q Consensus 242 ~L~~L~l~~N~-~~G~iP~~~~~l~~L~~l~l~~N 275 (772)
+|++|+|+++. ++..==..+..+++|+.|+|++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 45555555442 33211123445555666655543
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.41 E-value=0.0085 Score=58.59 Aligned_cols=110 Identities=13% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCcEEEEEecCC-CCcc----cCchhhcCCCCCCEEEcccCcCccc----CchhhcCCCCCCEeeccCCcCccc----CC
Q 004129 168 DGKVVILNLRDL-CLGG----MLAPELGQLSELKSIILRNNSFFGT----IPKEIGELKELEILDLGFNNFSGP----FP 234 (772)
Q Consensus 168 ~~~v~~l~L~~~-~l~G----~ip~~l~~l~~L~~L~L~~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP 234 (772)
+..++.|+|+++ .++. .|-..|..=+.|+.|+|++|.+... |-..|..-+.|+.|+|++|.++.. |-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 346778899875 6653 2455667778899999999998732 444455567899999999998753 22
Q ss_pred cccCCCCCCCEEECccCC--Ccc-----cCChhhcCCCCCCEEEcCCCCC
Q 004129 235 SDFGNSFSLTTLLLDNNQ--YLG-----GISPELHVLKVISEIQVDESWL 277 (772)
Q Consensus 235 ~~l~~l~~L~~L~l~~N~--~~G-----~iP~~~~~l~~L~~l~l~~N~l 277 (772)
..+..-+.|+.|+|++|. ..| .|-..+..-+.|..|+++.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 334445679999998652 223 2334555677888888876643
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.35 E-value=0.0054 Score=58.86 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=64.3
Q ss_pred CcEEEEEecCCCCcccCchhhcCCCCCCEEEcccCc-CcccCchhhcCC----CCCCEeeccCC-cCcccCCcccCCCCC
Q 004129 169 GKVVILNLRDLCLGGMLAPELGQLSELKSIILRNNS-FFGTIPKEIGEL----KELEILDLGFN-NFSGPFPSDFGNSFS 242 (772)
Q Consensus 169 ~~v~~l~L~~~~l~G~ip~~l~~l~~L~~L~L~~N~-l~G~iP~~l~~l----~~L~~L~ls~N-~l~G~iP~~l~~l~~ 242 (772)
-.++.|||++..++..=-..+..+++|++|+|+++. ++..-=..++.+ ++|+.|||+++ +++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 369999999998765433457899999999999985 765433456664 47999999996 476543345778999
Q ss_pred CCEEECccCC
Q 004129 243 LTTLLLDNNQ 252 (772)
Q Consensus 243 L~~L~l~~N~ 252 (772)
|++|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.32 E-value=0.03 Score=60.38 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=23.3
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
.++|+|+++.|||++++. +.|.||..+.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999998665 8999997643
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.25 E-value=0.024 Score=51.53 Aligned_cols=16 Identities=6% Similarity=0.086 Sum_probs=7.3
Q ss_pred cCCCCCCEEEcCCCCC
Q 004129 262 HVLKVISEIQVDESWL 277 (772)
Q Consensus 262 ~~l~~L~~l~l~~N~l 277 (772)
..+.+|+.|+|++|.+
T Consensus 52 ~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 52 DALPALRTAHLGANPW 67 (130)
T ss_dssp GGCTTCCEEECCSSCC
T ss_pred hhccccCEEEecCCCe
Confidence 3344444444444444
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.57 E-value=0.21 Score=52.98 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=26.3
Q ss_pred CCeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 604 PPIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 604 ~~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
..++|+|+.+.||++++++.+.|.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 359999999999999988889999997643
No 434
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.53 E-value=0.11 Score=51.39 Aligned_cols=98 Identities=18% Similarity=0.130 Sum_probs=63.2
Q ss_pred CChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHH-hcCCCCeEeeCCCCCCeEECCCCcEEEccccCccCCCCCCccccc
Q 004129 566 GSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHM-HQLTPPIAHRNLQSSSIYLTEDYAAKISDFSFWNNTTAAKTGSAA 644 (772)
Q Consensus 566 GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yL-H~~~~~IvHrDLKp~NILld~~~~~kL~DFGla~~~~~~~~~~~a 644 (772)
-+|.++|. ....+++..++..++.|.+.+|.-+ +...+ ..+=+-|..|++..+|.+...+ ..+. .......+
T Consensus 33 vSL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~~~~~~~ 105 (229)
T 2yle_A 33 LSLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AGEPPPVA 105 (229)
T ss_dssp EEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---ccccCCCC
Confidence 47888885 3467899999999999999988776 22111 1222346899999999998875 2211 12233457
Q ss_pred hhhhccCCCCCCCcHHHHHHHHHHHHc
Q 004129 645 MELLETSAVDLESNVYSFGTILFEMIT 671 (772)
Q Consensus 645 pE~~~~~~~s~ksDVwSfGvvL~ELlt 671 (772)
||... ...+.+.=|||+|+++|.-+-
T Consensus 106 pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 106 GKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred hhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 77642 344577789999999999886
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=94.44 E-value=0.077 Score=48.11 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=45.8
Q ss_pred CEEEcccCcCc-ccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCCEEECccCCCc
Q 004129 196 KSIILRNNSFF-GTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLTTLLLDNNQYL 254 (772)
Q Consensus 196 ~~L~L~~N~l~-G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~~L~l~~N~~~ 254 (772)
..++.+++.|+ -.||..+. ++|+.|||++|+|+.--+..+..+++|+.|+|++|.|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 56776543 46999999999999533445688999999999999874
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.28 E-value=0.049 Score=53.16 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=65.7
Q ss_pred CchhhcCCCCCCEEEcccC-cCccc----CchhhcCCCCCCEeeccCCcCccc----CCcccCCCCCCCEEECccCCCcc
Q 004129 185 LAPELGQLSELKSIILRNN-SFFGT----IPKEIGELKELEILDLGFNNFSGP----FPSDFGNSFSLTTLLLDNNQYLG 255 (772)
Q Consensus 185 ip~~l~~l~~L~~L~L~~N-~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~----iP~~l~~l~~L~~L~l~~N~~~G 255 (772)
|..-+.+-+.|+.|+|++| .+... |-..+..-+.|+.|+|++|.+... |-..+..-+.|+.|+|++|.+..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3334556789999999986 77532 445666778999999999999743 22234345789999999999874
Q ss_pred c----CChhhcCCCCCCEEEcCCC
Q 004129 256 G----ISPELHVLKVISEIQVDES 275 (772)
Q Consensus 256 ~----iP~~~~~l~~L~~l~l~~N 275 (772)
. |-..+..-+.|+.|+|++|
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHHhhCCceeEEECCCC
Confidence 2 3335556778999999865
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=92.80 E-value=0.23 Score=54.13 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=33.5
Q ss_pred hcCCCCCCEEEcccCcCcc----cCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCC-hhh
Q 004129 189 LGQLSELKSIILRNNSFFG----TIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PEL 261 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G----~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP-~~~ 261 (772)
+.++++|+.++|.+|.+.. .|+ ..+..|++|+.++|++ ++. .|+ ..+.+|++|+.+.|..| ++ .|+ ..+
T Consensus 267 F~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF 342 (401)
T 4fdw_A 267 FYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VT-QINFSAF 342 (401)
T ss_dssp TTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CC-EECTTSS
T ss_pred hhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-cc-EEcHHhC
Confidence 3444455555554444330 122 2334445555555542 222 122 23344455555555333 11 122 223
Q ss_pred cCCCCCCEEEcCCCC
Q 004129 262 HVLKVISEIQVDESW 276 (772)
Q Consensus 262 ~~l~~L~~l~l~~N~ 276 (772)
.++ +|+.+++++|.
T Consensus 343 ~~~-~L~~l~l~~n~ 356 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTT 356 (401)
T ss_dssp SSS-CCCEEEECCSS
T ss_pred CCC-CCCEEEEcCCC
Confidence 334 45555555443
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.75 E-value=0.29 Score=53.21 Aligned_cols=28 Identities=25% Similarity=0.374 Sum_probs=24.9
Q ss_pred CeEeeCCCCCCeEECCC------CcEEEccccCc
Q 004129 605 PIAHRNLQSSSIYLTED------YAAKISDFSFW 632 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~------~~~kL~DFGla 632 (772)
.++|+|+.+.|||++++ +.+.+.||..+
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 58999999999999876 78999999764
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=89.43 E-value=0.78 Score=49.90 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=68.6
Q ss_pred cEEEEEecCCCCc----ccCch-hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCCcccCCCCCCC
Q 004129 170 KVVILNLRDLCLG----GMLAP-ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFPSDFGNSFSLT 244 (772)
Q Consensus 170 ~v~~l~L~~~~l~----G~ip~-~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~l~~L~ 244 (772)
.+..|+|.++.+. ..|+. .+..+++|+.++|. |++.--=...+.+|++|+.++|..| ++---+..+.++ +|+
T Consensus 272 ~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~ 348 (401)
T 4fdw_A 272 ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIK 348 (401)
T ss_dssp TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCC
T ss_pred CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCC
Confidence 5667777776654 12443 47789999999998 4465222346778999999999766 442223467888 999
Q ss_pred EEECccCCCcccCChhhcCC-CCCCEEEcCCC
Q 004129 245 TLLLDNNQYLGGISPELHVL-KVISEIQVDES 275 (772)
Q Consensus 245 ~L~l~~N~~~G~iP~~~~~l-~~L~~l~l~~N 275 (772)
.+++++|.+.--.+..+..+ ..+..|++..|
T Consensus 349 ~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 349 EVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp EEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred EEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 99999997643323334444 35666666544
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=88.60 E-value=0.93 Score=49.68 Aligned_cols=28 Identities=18% Similarity=0.415 Sum_probs=24.6
Q ss_pred CeEeeCCCCCCeEECCCCcEEEccccCcc
Q 004129 605 PIAHRNLQSSSIYLTEDYAAKISDFSFWN 633 (772)
Q Consensus 605 ~IvHrDLKp~NILld~~~~~kL~DFGla~ 633 (772)
.++|+|+.+.||+ +.++.+.|.||..+.
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCC
Confidence 5899999999999 778899999997653
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.46 E-value=1.6 Score=47.27 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=23.6
Q ss_pred eEeeCCCCCCeEE------CCCCcEEEccccCcc
Q 004129 606 IAHRNLQSSSIYL------TEDYAAKISDFSFWN 633 (772)
Q Consensus 606 IvHrDLKp~NILl------d~~~~~kL~DFGla~ 633 (772)
++|+|+.+.|||+ +++..+++.||-++.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999997654
No 442
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.68 E-value=0.64 Score=33.22 Aligned_cols=29 Identities=28% Similarity=0.558 Sum_probs=16.7
Q ss_pred eeeehHHHHHHHHHHHHHHH-HHHhhcCcc
Q 004129 414 VLVLAGIIGGLSLILISAIG-FFVCRSSKV 442 (772)
Q Consensus 414 ~~i~~~~~~~~~~~~~~~~~-~~~~r~~~~ 442 (772)
..|+++++++++++++++++ ++++|+|+.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 35777887776655544444 555555443
No 443
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.42 E-value=0.66 Score=33.10 Aligned_cols=29 Identities=31% Similarity=0.596 Sum_probs=16.3
Q ss_pred eeehHHHHHHHHHHHHHHH-HHHhhcCccc
Q 004129 415 LVLAGIIGGLSLILISAIG-FFVCRSSKVV 443 (772)
Q Consensus 415 ~i~~~~~~~~~~~~~~~~~-~~~~r~~~~~ 443 (772)
.|+++++++++++++++++ ++++|+|+.+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4677777766655444443 5555555443
No 444
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=79.71 E-value=1.2 Score=31.68 Aligned_cols=25 Identities=8% Similarity=0.396 Sum_probs=10.4
Q ss_pred eehHHHHHHHHHHHHH-HHHHHhhcCc
Q 004129 416 VLAGIIGGLSLILISA-IGFFVCRSSK 441 (772)
Q Consensus 416 i~~~~~~~~~~~~~~~-~~~~~~r~~~ 441 (772)
+++++++ ++++++++ +.+++.|||+
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 4555555 33333333 3334444433
No 445
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.91 E-value=4.9 Score=39.35 Aligned_cols=115 Identities=12% Similarity=0.114 Sum_probs=76.5
Q ss_pred CCCcccceeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHHHHhcCCCCeEeeCCCCCCe
Q 004129 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLEHMHQLTPPIAHRNLQSSSI 616 (772)
Q Consensus 537 ~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~yLH~~~~~IvHrDLKp~NI 616 (772)
.||+.+.. .+-.+.+ ...+ .|-...+...+- .-..++...+++++..|+...++++. -+|--|.|+||
T Consensus 43 ~~~~Fl~~-~I~e~eD--~v~~--~y~~~~~~~~f~---~ik~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--SFQI--HYDINDNHTPFD---NIKSFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSS--EEEE--EECCCTTSEEGG---GGGGSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGE
T ss_pred cCCcccce-EEEEccc--EEEE--EEEcCcccCCHH---HHHhcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceE
Confidence 68888876 4555544 3344 444444444442 12447788899999999987766654 45777889999
Q ss_pred EECCCCcEEEccccCccCCCCCCccccchhhhccCCCCCCCcH-HHHHHHHHHHHcCCCccc
Q 004129 617 YLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNV-YSFGTILFEMITGRISYS 677 (772)
Q Consensus 617 Lld~~~~~kL~DFGla~~~~~~~~~~~apE~~~~~~~s~ksDV-wSfGvvL~ELltG~~P~~ 677 (772)
++|.++.+++.-.|+-.... |. .. .+.|- -.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~--------P~-----~~-~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD--------PL-----PV-SEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBS--------CC-----CC-CHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCC--------CC-----CC-CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999888633221 11 11 11232 367788999999998884
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.63 E-value=0.45 Score=52.92 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=17.2
Q ss_pred ccccccccceEEEEEEEEcC-CcEEEE------EEeeecccchhhhhHHHHHHHHHHHHhccCCCcccceeEEEEc
Q 004129 482 IIGSFSDGTVGTVYKGTLSS-GVEIAV------TSTSVKSRADWSKNLESQFRKKIDTLSKVNHKNFVNLIGYCEE 550 (772)
Q Consensus 482 iig~lg~G~fg~Vykg~~~~-~~~vaV------K~~~~~~~~~~~~~~~~~f~~Ei~~L~~l~HpNIV~l~g~~~~ 550 (772)
+..++| ||.||+|.+.. ..+||| |..+... ........|.+|..++...+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~---~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG---VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCcccccccc---ccccccccccccccccccccccccCCCcceEEe
Confidence 344555 88999999864 356777 4433211 122334568899999999999999999998754
No 447
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=72.14 E-value=1.3 Score=31.00 Aligned_cols=26 Identities=35% Similarity=0.839 Sum_probs=12.5
Q ss_pred eeeehHHHHHHHHHH-HHHHHHHHhhc
Q 004129 414 VLVLAGIIGGLSLIL-ISAIGFFVCRS 439 (772)
Q Consensus 414 ~~i~~~~~~~~~~~~-~~~~~~~~~r~ 439 (772)
..+++++++++++++ ++.+.++++||
T Consensus 13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred EEEEeehhHHHHHHHHHHHHheeEeee
Confidence 345556666655544 33333444444
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=70.28 E-value=11 Score=37.01 Aligned_cols=114 Identities=5% Similarity=0.056 Sum_probs=71.9
Q ss_pred CCCcccceeEEEEcCCCceEEEEEecCCCCChhhhhhhhccCCCCHHHHHHHHHHHHHHHH-HHhcCCCCeEeeCCCCCC
Q 004129 537 NHKNFVNLIGYCEEDEPFTRMMVFEYSPNGSLFEHLHIQEAEHLDWAMRLRIAMGMAYCLE-HMHQLTPPIAHRNLQSSS 615 (772)
Q Consensus 537 ~HpNIV~l~g~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~l~~~~~~~Ia~~ia~gL~-yLH~~~~~IvHrDLKp~N 615 (772)
.||++ -..+-.+.+ ...+.|+--++ ...+-. -..++...+++++..|+.... +++. -+|--|.|+|
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~--~~~f~~---i~~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSS--FLTFAA---IRKTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTT--CEEHHH---HHTSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcc--cCcHHH---HHhcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCce
Confidence 67877 333444444 44444544333 223321 134778889999999988766 5554 5567788999
Q ss_pred eEECCCCcEEEccccCccCCCCCCccccchhhhccCCCCCCCcHH-HHHHHHHHHHcCCCccc
Q 004129 616 IYLTEDYAAKISDFSFWNNTTAAKTGSAAMELLETSAVDLESNVY-SFGTILFEMITGRISYS 677 (772)
Q Consensus 616 ILld~~~~~kL~DFGla~~~~~~~~~~~apE~~~~~~~s~ksDVw-SfGvvL~ELltG~~P~~ 677 (772)
|++|.++.+++.-.|+-... +|.. . ...|-| .+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l--------pP~e-----~-~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL--------PPDE-----W-DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB--------SSCS-----C-CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC--------CCCC-----C-CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999998873322 1211 0 112333 57778888888887763
No 449
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=67.59 E-value=15 Score=39.13 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=43.7
Q ss_pred hcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCC-hhhcCCC
Q 004129 189 LGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLK 265 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP-~~~~~l~ 265 (772)
+.+++.|+.+.+.++... |. ..+.+|+.|+.++++.+ +. .|+ ..+.+|.+|+.++|..| ++ .|. ..+..+.
T Consensus 261 F~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~ 334 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFSSR-IT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCE 334 (394)
T ss_dssp TTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred eeecccccEEecccccce--ecCcccccccccccccCCCc-cc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCC
Confidence 445677777777554332 22 23456677777776532 22 233 23556677777776544 11 222 2345566
Q ss_pred CCCEEEcCCC
Q 004129 266 VISEIQVDES 275 (772)
Q Consensus 266 ~L~~l~l~~N 275 (772)
+|+.+.+..+
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 6777666433
No 450
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=66.78 E-value=9.3 Score=40.81 Aligned_cols=79 Identities=19% Similarity=0.114 Sum_probs=38.4
Q ss_pred hcCCCCCCEEEcccCcCcccCch-hhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCC-hhhcCCC
Q 004129 189 LGQLSELKSIILRNNSFFGTIPK-EIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLK 265 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~-~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP-~~~~~l~ 265 (772)
+..+..|+.+.+..+. ||. .+..+.+|+.+.+..| +. .|+ ..+.++.+|+.++|.++ ++ .|+ ..+.++.
T Consensus 272 F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~ 343 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCT 343 (394)
T ss_dssp TTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCT
T ss_pred cccccccceeccCcee----eccccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCC
Confidence 3445556655554432 222 3445666666666543 22 222 23555666666666433 21 232 2344556
Q ss_pred CCCEEEcCCC
Q 004129 266 VISEIQVDES 275 (772)
Q Consensus 266 ~L~~l~l~~N 275 (772)
+|+.+.+..|
T Consensus 344 ~L~~i~lp~~ 353 (394)
T 4fs7_A 344 SLSNINFPLS 353 (394)
T ss_dssp TCCEECCCTT
T ss_pred CCCEEEECcc
Confidence 6666666544
No 451
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=66.02 E-value=6.7 Score=41.98 Aligned_cols=83 Identities=12% Similarity=0.179 Sum_probs=59.9
Q ss_pred hhcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCCh-hhcCC
Q 004129 188 ELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISP-ELHVL 264 (772)
Q Consensus 188 ~l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP~-~~~~l 264 (772)
.+.+++.|+.+.+. +.+. .|+ ..+.+|.+|+.++|..| ++ .|. ..+.+|.+|+.+.+..+ ++ .|.. .+.++
T Consensus 283 aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C 356 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNC 356 (394)
T ss_dssp TTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTC
T ss_pred ccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCC
Confidence 35678899999986 3443 344 35678999999999865 33 243 45788999999999755 32 4543 56789
Q ss_pred CCCCEEEcCCCC
Q 004129 265 KVISEIQVDESW 276 (772)
Q Consensus 265 ~~L~~l~l~~N~ 276 (772)
.+|+.+++.+|.
T Consensus 357 ~~L~~i~~~~~~ 368 (394)
T 4gt6_A 357 TALNNIEYSGSR 368 (394)
T ss_dssp TTCCEEEESSCH
T ss_pred CCCCEEEECCce
Confidence 999999998764
No 452
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=65.95 E-value=14 Score=38.90 Aligned_cols=83 Identities=13% Similarity=0.129 Sum_probs=46.4
Q ss_pred hcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCC-hhhcCCCC
Q 004129 189 LGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVLKV 266 (772)
Q Consensus 189 l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP-~~~~~l~~ 266 (772)
+.++..|+.+.+..+ ++--=...+.++.+|+.+++..+ +. .++ ..+.++.+|+.+.+.+|.++ .|+ ..+.++.+
T Consensus 236 f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~ 311 (379)
T 4h09_A 236 FYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVK 311 (379)
T ss_dssp TTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTT
T ss_pred ccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCCC
Confidence 455667777777554 32111234456677777776544 22 233 23566777777777666543 232 34556677
Q ss_pred CCEEEcCCC
Q 004129 267 ISEIQVDES 275 (772)
Q Consensus 267 L~~l~l~~N 275 (772)
|+.+.|..+
T Consensus 312 L~~i~lp~~ 320 (379)
T 4h09_A 312 LSSVTLPTA 320 (379)
T ss_dssp CCEEECCTT
T ss_pred CCEEEcCcc
Confidence 777777543
No 453
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=60.95 E-value=11 Score=40.20 Aligned_cols=82 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred hhcCCCCCCEEEcccCcCcccCc-hhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCC-hhhcCC
Q 004129 188 ELGQLSELKSIILRNNSFFGTIP-KEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGIS-PELHVL 264 (772)
Q Consensus 188 ~l~~l~~L~~L~L~~N~l~G~iP-~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP-~~~~~l 264 (772)
.+..+.+|+.+.+.++ +. .|+ ..+.+|++|+.++|+.+ ++ .|+ ..+.+|++|+.+++..| ++ .|+ ..+.++
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C 365 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGC 365 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTC
T ss_pred cccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCC
Confidence 3567889999998755 43 343 35778999999999755 43 343 45788999999999766 33 344 356788
Q ss_pred CCCCEEEcCCC
Q 004129 265 KVISEIQVDES 275 (772)
Q Consensus 265 ~~L~~l~l~~N 275 (772)
.+|+.+.+..|
T Consensus 366 ~~L~~i~lp~~ 376 (394)
T 4fs7_A 366 INLKKVELPKR 376 (394)
T ss_dssp TTCCEEEEEGG
T ss_pred CCCCEEEECCC
Confidence 99999988654
No 454
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=50.35 E-value=40 Score=35.35 Aligned_cols=86 Identities=14% Similarity=0.067 Sum_probs=57.1
Q ss_pred hhcCCCCCCEEEcccCcCcccCchhhcCCCCCCEeeccCCcCcccCC-cccCCCCCCCEEECccCCCcccCCh-hhcCCC
Q 004129 188 ELGQLSELKSIILRNNSFFGTIPKEIGELKELEILDLGFNNFSGPFP-SDFGNSFSLTTLLLDNNQYLGGISP-ELHVLK 265 (772)
Q Consensus 188 ~l~~l~~L~~L~L~~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP-~~l~~l~~L~~L~l~~N~~~G~iP~-~~~~l~ 265 (772)
.+.....|+.+.+..+ +.---...+.++..|+.+.+..+ ++ .|. ..+.++.+|+.+.+..+ +. .|+. .+..+.
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~ 286 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCS 286 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-ecccccccccc
Confidence 3456778888887654 22222335667899999998776 33 232 34667889999988654 22 3333 456789
Q ss_pred CCCEEEcCCCCCC
Q 004129 266 VISEIQVDESWLT 278 (772)
Q Consensus 266 ~L~~l~l~~N~l~ 278 (772)
+|+.+.+..|.++
T Consensus 287 ~L~~i~l~~~~i~ 299 (379)
T 4h09_A 287 NLTKVVMDNSAIE 299 (379)
T ss_dssp TCCEEEECCTTCC
T ss_pred ccccccccccccc
Confidence 9999999877665
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=46.09 E-value=4.9 Score=27.08 Aligned_cols=7 Identities=29% Similarity=0.952 Sum_probs=4.1
Q ss_pred eehHHHH
Q 004129 416 VLAGIIG 422 (772)
Q Consensus 416 i~~~~~~ 422 (772)
|++++++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 5556655
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=36.01 E-value=31 Score=23.63 Aligned_cols=9 Identities=33% Similarity=0.364 Sum_probs=4.3
Q ss_pred HHHHHHhhc
Q 004129 431 AIGFFVCRS 439 (772)
Q Consensus 431 ~~~~~~~r~ 439 (772)
+++++++||
T Consensus 29 ~l~~~~~rr 37 (38)
T 2k1k_A 29 GILVFRSRR 37 (38)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHeec
Confidence 334555554
Done!