Query 004133
Match_columns 772
No_of_seqs 636 out of 3947
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 15:21:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004133.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004133hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gjy_A Spermidine synthase; AP 99.9 3E-25 1E-29 238.1 19.7 182 510-734 61-251 (317)
2 3o4f_A Spermidine synthase; am 99.9 2.3E-23 7.8E-28 220.5 16.7 170 516-732 66-247 (294)
3 2pxx_A Uncharacterized protein 99.9 2.2E-21 7.6E-26 195.6 17.7 190 24-226 3-200 (215)
4 3c6k_A Spermine synthase; sper 99.9 8.9E-21 3E-25 206.3 20.2 174 517-730 190-378 (381)
5 1iy9_A Spermidine synthase; ro 99.9 4.1E-20 1.4E-24 195.9 23.0 168 516-731 58-237 (275)
6 1uir_A Polyamine aminopropyltr 99.8 2.7E-19 9.2E-24 193.2 22.2 185 516-744 60-258 (314)
7 1mjf_A Spermidine synthase; sp 99.8 2.5E-18 8.6E-23 182.7 22.4 166 516-730 58-239 (281)
8 2i7c_A Spermidine synthase; tr 99.8 7.6E-18 2.6E-22 179.2 23.4 168 516-730 61-239 (283)
9 2gb4_A Thiopurine S-methyltran 99.8 1.5E-18 5E-23 181.6 17.1 144 26-181 31-193 (252)
10 2qfm_A Spermine synthase; sper 99.8 1.4E-17 4.9E-22 180.5 23.7 153 517-714 173-339 (364)
11 2b2c_A Spermidine synthase; be 99.8 1.2E-17 4.2E-22 180.0 22.0 167 517-730 92-269 (314)
12 1inl_A Spermidine synthase; be 99.8 1.4E-17 4.6E-22 178.3 21.3 169 517-731 74-253 (296)
13 3adn_A Spermidine synthase; am 99.8 2.2E-18 7.4E-23 184.2 13.7 168 517-731 67-246 (294)
14 3bwc_A Spermidine synthase; SA 99.7 4.9E-16 1.7E-20 166.8 22.9 168 517-730 79-258 (304)
15 1pjz_A Thiopurine S-methyltran 99.7 1.3E-17 4.3E-22 168.5 9.1 107 67-180 21-141 (203)
16 2o07_A Spermidine synthase; st 99.7 2.5E-16 8.7E-21 169.0 19.8 167 517-730 79-256 (304)
17 2pt6_A Spermidine synthase; tr 99.7 8.1E-16 2.8E-20 166.4 19.9 168 517-731 100-278 (321)
18 2cmg_A Spermidine synthase; tr 99.7 3.6E-16 1.2E-20 164.3 15.9 155 517-733 56-219 (262)
19 2xvm_A Tellurite resistance pr 99.6 2.4E-15 8.3E-20 149.5 16.5 133 24-180 4-137 (199)
20 1xj5_A Spermidine synthase 1; 99.6 3.6E-15 1.2E-19 162.0 18.4 168 516-730 103-283 (334)
21 3v97_A Ribosomal RNA large sub 99.6 6.2E-13 2.1E-17 157.9 38.9 113 543-693 540-660 (703)
22 3lcc_A Putative methyl chlorid 99.6 1.6E-15 5.6E-20 155.7 12.2 141 27-182 32-174 (235)
23 3sm3_A SAM-dependent methyltra 99.6 2.5E-15 8.5E-20 153.3 13.3 139 27-184 2-146 (235)
24 2ex4_A Adrenal gland protein A 99.6 1.9E-15 6.4E-20 155.9 11.8 108 68-181 79-187 (241)
25 3ofk_A Nodulation protein S; N 99.6 2.8E-15 9.5E-20 151.7 12.8 142 27-183 13-158 (216)
26 4hg2_A Methyltransferase type 99.6 2.1E-15 7.3E-20 158.0 11.9 114 51-184 27-140 (257)
27 4gek_A TRNA (CMO5U34)-methyltr 99.6 4.5E-15 1.5E-19 155.9 13.4 107 67-181 69-180 (261)
28 3g5l_A Putative S-adenosylmeth 99.6 1.3E-14 4.3E-19 150.6 15.5 105 67-181 43-147 (253)
29 3dlc_A Putative S-adenosyl-L-m 99.6 1.3E-14 4.6E-19 146.0 14.7 135 28-181 14-150 (219)
30 3l8d_A Methyltransferase; stru 99.6 8.6E-15 2.9E-19 150.4 13.3 117 51-183 41-157 (242)
31 2a14_A Indolethylamine N-methy 99.6 1.9E-15 6.6E-20 158.5 8.5 147 24-180 14-198 (263)
32 3ggd_A SAM-dependent methyltra 99.6 1.5E-14 5.1E-19 149.3 14.5 147 27-184 15-168 (245)
33 1xtp_A LMAJ004091AAA; SGPP, st 99.6 4E-15 1.4E-19 154.0 10.0 107 67-180 92-198 (254)
34 2o57_A Putative sarcosine dime 99.6 2.5E-14 8.4E-19 152.1 16.2 108 67-183 81-191 (297)
35 3hnr_A Probable methyltransfer 99.6 1.4E-14 4.9E-19 146.7 13.6 104 67-181 44-147 (220)
36 3h2b_A SAM-dependent methyltra 99.6 1.1E-14 3.9E-19 145.7 12.4 116 53-183 30-145 (203)
37 3g5t_A Trans-aconitate 3-methy 99.6 1.5E-14 5.2E-19 154.3 13.8 119 52-183 24-153 (299)
38 3ujc_A Phosphoethanolamine N-m 99.6 7.2E-15 2.4E-19 152.9 11.0 118 58-183 45-163 (266)
39 2kw5_A SLR1183 protein; struct 99.6 5.8E-15 2E-19 147.7 9.7 136 30-184 1-136 (202)
40 2p7i_A Hypothetical protein; p 99.6 1.1E-14 3.6E-19 149.6 11.7 104 68-184 42-146 (250)
41 1vl5_A Unknown conserved prote 99.6 2.2E-14 7.4E-19 149.6 14.1 113 57-181 29-142 (260)
42 3kkz_A Uncharacterized protein 99.6 3.5E-14 1.2E-18 148.7 15.7 119 52-181 32-152 (267)
43 3f4k_A Putative methyltransfer 99.6 3.7E-14 1.3E-18 147.2 15.4 118 52-180 32-151 (257)
44 3jwg_A HEN1, methyltransferase 99.5 1.1E-13 3.7E-18 140.3 18.2 163 53-225 17-211 (219)
45 3pfg_A N-methyltransferase; N, 99.5 3E-14 1E-18 148.8 13.8 136 28-183 19-155 (263)
46 3thr_A Glycine N-methyltransfe 99.5 3.8E-14 1.3E-18 150.3 14.6 159 16-186 16-182 (293)
47 3cgg_A SAM-dependent methyltra 99.5 8E-14 2.7E-18 137.4 15.6 105 67-182 45-150 (195)
48 3dtn_A Putative methyltransfer 99.5 6.5E-14 2.2E-18 143.3 15.4 123 51-183 29-152 (234)
49 3dli_A Methyltransferase; PSI- 99.5 2.8E-14 9.5E-19 147.0 12.3 134 27-184 10-145 (240)
50 3m70_A Tellurite resistance pr 99.5 7.3E-14 2.5E-18 147.8 15.8 105 68-180 120-224 (286)
51 3jwh_A HEN1; methyltransferase 99.5 5.8E-14 2E-18 142.2 14.4 118 54-180 18-142 (217)
52 3mti_A RRNA methylase; SAM-dep 99.5 9.8E-14 3.4E-18 136.8 15.6 152 67-223 21-183 (185)
53 1y8c_A S-adenosylmethionine-de 99.5 6E-14 2E-18 144.0 14.4 128 49-184 19-147 (246)
54 1ve3_A Hypothetical protein PH 99.5 5.1E-14 1.7E-18 143.0 13.3 111 68-185 38-148 (227)
55 3bkw_A MLL3908 protein, S-aden 99.5 6.2E-14 2.1E-18 143.9 14.1 114 55-181 33-146 (243)
56 1wzn_A SAM-dependent methyltra 99.5 6E-14 2.1E-18 145.2 13.8 136 28-179 9-145 (252)
57 2i62_A Nicotinamide N-methyltr 99.5 1.7E-14 5.9E-19 150.0 9.8 151 24-180 15-199 (265)
58 2p8j_A S-adenosylmethionine-de 99.5 4.3E-14 1.5E-18 141.8 12.2 111 67-184 22-133 (209)
59 1nkv_A Hypothetical protein YJ 99.5 7.1E-14 2.4E-18 144.9 13.9 117 51-180 22-141 (256)
60 1xxl_A YCGJ protein; structura 99.5 9.5E-14 3.2E-18 143.2 14.5 116 55-182 11-127 (239)
61 2vdw_A Vaccinia virus capping 99.5 3.1E-14 1E-18 152.7 11.1 114 68-185 48-175 (302)
62 3g2m_A PCZA361.24; SAM-depende 99.5 2.3E-14 8E-19 152.8 9.8 123 52-186 70-197 (299)
63 2yqz_A Hypothetical protein TT 99.5 1.5E-13 5.2E-18 142.7 15.7 103 67-178 38-140 (263)
64 2gs9_A Hypothetical protein TT 99.5 1E-13 3.5E-18 139.6 13.8 102 68-184 36-137 (211)
65 3dh0_A SAM dependent methyltra 99.5 4.9E-14 1.7E-18 142.6 11.4 115 57-182 29-146 (219)
66 3i9f_A Putative type 11 methyl 99.5 1.4E-13 4.7E-18 133.8 14.1 101 67-183 16-116 (170)
67 3ou2_A SAM-dependent methyltra 99.5 8.3E-14 2.9E-18 140.4 12.8 114 56-182 36-149 (218)
68 3e23_A Uncharacterized protein 99.5 1.2E-13 4.1E-18 139.2 13.9 102 67-181 42-143 (211)
69 3bus_A REBM, methyltransferase 99.5 1.6E-13 5.4E-18 143.8 14.8 108 67-182 60-169 (273)
70 3mgg_A Methyltransferase; NYSG 99.5 1.1E-13 3.7E-18 145.4 13.2 106 67-180 36-143 (276)
71 3ege_A Putative methyltransfer 99.5 8.4E-14 2.9E-18 145.6 12.0 117 50-184 19-135 (261)
72 3ccf_A Cyclopropane-fatty-acyl 99.5 1.7E-13 6E-18 144.4 14.1 110 57-183 49-158 (279)
73 1zx0_A Guanidinoacetate N-meth 99.5 7.2E-14 2.5E-18 143.8 10.6 111 67-181 59-172 (236)
74 4htf_A S-adenosylmethionine-de 99.5 2.2E-13 7.4E-18 144.0 13.9 109 68-184 68-178 (285)
75 3eey_A Putative rRNA methylase 99.5 8.5E-13 2.9E-17 131.4 17.4 155 67-225 21-189 (197)
76 3bxo_A N,N-dimethyltransferase 99.5 1.8E-13 6.1E-18 140.1 12.8 135 28-182 9-144 (239)
77 2avn_A Ubiquinone/menaquinone 99.5 1.7E-13 5.8E-18 143.1 12.7 115 51-183 42-156 (260)
78 1ri5_A MRNA capping enzyme; me 99.5 1.3E-13 4.3E-18 146.0 11.1 116 67-186 63-181 (298)
79 3vc1_A Geranyl diphosphate 2-C 99.5 3.3E-13 1.1E-17 144.9 14.1 108 67-184 116-226 (312)
80 3evz_A Methyltransferase; NYSG 99.5 1.5E-12 5.1E-17 132.9 18.3 155 67-226 54-222 (230)
81 3gu3_A Methyltransferase; alph 99.4 4.7E-13 1.6E-17 141.7 14.2 106 67-181 21-128 (284)
82 3d2l_A SAM-dependent methyltra 99.4 4.4E-13 1.5E-17 137.5 13.4 121 51-184 21-142 (243)
83 3e05_A Precorrin-6Y C5,15-meth 99.4 2.1E-12 7.2E-17 129.5 17.9 119 51-183 26-146 (204)
84 3hem_A Cyclopropane-fatty-acyl 99.4 7.9E-13 2.7E-17 141.1 15.5 113 66-183 70-187 (302)
85 2g72_A Phenylethanolamine N-me 99.4 2.3E-13 7.7E-18 144.4 10.5 158 17-179 22-215 (289)
86 3orh_A Guanidinoacetate N-meth 99.4 2.3E-13 7.9E-18 140.5 9.5 114 55-179 51-170 (236)
87 3njr_A Precorrin-6Y methylase; 99.4 2.3E-12 7.9E-17 129.9 16.3 118 51-185 41-160 (204)
88 2p35_A Trans-aconitate 2-methy 99.4 1.2E-12 4.2E-17 135.7 14.5 102 67-181 32-134 (259)
89 1kpg_A CFA synthase;, cyclopro 99.4 1.7E-12 5.8E-17 137.2 15.8 115 59-183 55-172 (287)
90 1vlm_A SAM-dependent methyltra 99.4 9.4E-13 3.2E-17 133.7 13.0 98 68-184 47-144 (219)
91 3iv6_A Putative Zn-dependent a 99.4 6.7E-13 2.3E-17 139.0 11.6 111 54-179 34-148 (261)
92 2fk8_A Methoxy mycolic acid sy 99.4 2.2E-12 7.5E-17 138.6 15.8 116 59-184 81-199 (318)
93 3e8s_A Putative SAM dependent 99.4 8.4E-13 2.9E-17 133.5 11.8 104 67-184 51-157 (227)
94 3p9n_A Possible methyltransfer 99.4 8.7E-13 3E-17 130.8 11.6 109 68-182 44-156 (189)
95 1l3i_A Precorrin-6Y methyltran 99.4 7.7E-13 2.6E-17 130.0 10.9 118 51-184 19-139 (192)
96 2fyt_A Protein arginine N-meth 99.4 2.8E-13 9.6E-18 147.6 8.4 115 53-176 52-168 (340)
97 1nt2_A Fibrillarin-like PRE-rR 99.4 1.8E-12 6.2E-17 131.5 13.1 115 52-179 42-161 (210)
98 3bgv_A MRNA CAP guanine-N7 met 99.4 8.8E-13 3E-17 141.5 11.4 116 68-187 34-163 (313)
99 3fpf_A Mtnas, putative unchara 99.4 8.2E-12 2.8E-16 132.3 18.5 142 46-206 103-251 (298)
100 4fsd_A Arsenic methyltransfera 99.4 1E-12 3.6E-17 145.4 12.1 107 67-181 82-205 (383)
101 1vbf_A 231AA long hypothetical 99.4 1.4E-12 4.8E-17 133.2 12.1 112 51-181 56-167 (231)
102 3ocj_A Putative exported prote 99.4 8.6E-13 2.9E-17 141.2 10.8 111 67-183 117-231 (305)
103 3lbf_A Protein-L-isoaspartate 99.4 2.1E-12 7.1E-17 129.9 12.8 113 51-181 63-176 (210)
104 2yxd_A Probable cobalt-precorr 99.4 4.3E-12 1.5E-16 123.8 14.4 133 51-203 21-155 (183)
105 3q7e_A Protein arginine N-meth 99.4 7.5E-13 2.6E-17 144.8 9.8 104 67-176 65-170 (349)
106 3hm2_A Precorrin-6Y C5,15-meth 99.4 4.3E-12 1.5E-16 123.7 13.5 116 52-184 12-132 (178)
107 4df3_A Fibrillarin-like rRNA/T 99.4 5.1E-12 1.8E-16 129.9 14.5 124 46-179 55-182 (233)
108 3grz_A L11 mtase, ribosomal pr 99.4 3.1E-12 1E-16 128.3 12.6 104 67-183 59-163 (205)
109 3g07_A 7SK snRNA methylphospha 99.4 1.3E-12 4.6E-17 139.0 10.0 111 68-179 46-220 (292)
110 2aot_A HMT, histamine N-methyl 99.4 2.3E-12 7.9E-17 136.9 11.8 109 67-182 51-175 (292)
111 2frn_A Hypothetical protein PH 99.4 3.2E-12 1.1E-16 135.2 12.8 119 46-182 108-228 (278)
112 3uwp_A Histone-lysine N-methyl 99.4 6.5E-12 2.2E-16 137.9 15.4 116 56-183 164-292 (438)
113 1af7_A Chemotaxis receptor met 99.4 3.4E-12 1.2E-16 134.7 12.9 141 28-178 69-251 (274)
114 2ift_A Putative methylase HI07 99.3 2.6E-12 8.9E-17 129.2 11.4 124 68-205 53-183 (201)
115 1dus_A MJ0882; hypothetical pr 99.3 7.1E-12 2.4E-16 123.3 13.8 120 52-183 39-161 (194)
116 1fbn_A MJ fibrillarin homologu 99.3 7.1E-12 2.4E-16 128.4 14.2 106 61-178 67-177 (230)
117 2ipx_A RRNA 2'-O-methyltransfe 99.3 2E-11 6.8E-16 125.2 17.4 125 46-181 55-184 (233)
118 3m33_A Uncharacterized protein 99.3 4.3E-12 1.5E-16 129.6 11.8 91 67-176 47-139 (226)
119 3gdh_A Trimethylguanosine synt 99.3 1.9E-13 6.3E-18 140.8 1.6 141 26-178 31-180 (241)
120 3fzg_A 16S rRNA methylase; met 99.3 4.5E-12 1.5E-16 125.3 11.1 145 48-206 34-189 (200)
121 3cc8_A Putative methyltransfer 99.3 3.7E-12 1.3E-16 129.0 10.9 109 56-183 24-134 (230)
122 3htx_A HEN1; HEN1, small RNA m 99.3 5.9E-12 2E-16 147.5 13.7 118 54-181 710-836 (950)
123 3tma_A Methyltransferase; thum 99.3 3.5E-11 1.2E-15 131.6 18.2 160 52-223 190-353 (354)
124 2esr_A Methyltransferase; stru 99.3 8.1E-12 2.8E-16 122.1 11.5 122 52-184 17-143 (177)
125 2zfu_A Nucleomethylin, cerebra 99.3 1E-11 3.5E-16 125.3 12.4 127 67-227 66-194 (215)
126 3dmg_A Probable ribosomal RNA 99.3 7.3E-12 2.5E-16 138.4 12.2 112 68-183 233-344 (381)
127 3r0q_C Probable protein argini 99.3 7.3E-12 2.5E-16 138.3 12.3 105 67-178 62-168 (376)
128 3bkx_A SAM-dependent methyltra 99.3 1.1E-11 3.9E-16 129.7 13.1 108 67-182 42-162 (275)
129 1p91_A Ribosomal RNA large sub 99.3 8E-12 2.7E-16 130.7 11.8 100 68-186 85-185 (269)
130 3ckk_A TRNA (guanine-N(7)-)-me 99.3 9.3E-12 3.2E-16 128.5 11.4 114 68-182 46-171 (235)
131 2qe6_A Uncharacterized protein 99.3 3E-11 1E-15 127.6 15.5 109 68-182 77-199 (274)
132 3dxy_A TRNA (guanine-N(7)-)-me 99.3 6.9E-12 2.4E-16 128.0 10.2 117 68-184 34-155 (218)
133 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.9E-11 9.9E-16 122.3 14.7 114 68-181 41-158 (214)
134 3q87_B N6 adenine specific DNA 99.3 2.1E-11 7.1E-16 119.2 13.1 102 68-182 23-126 (170)
135 2y1w_A Histone-arginine methyl 99.3 1.1E-11 3.8E-16 135.4 11.9 114 54-178 39-154 (348)
136 1jsx_A Glucose-inhibited divis 99.3 5.6E-11 1.9E-15 119.0 16.0 100 68-180 65-166 (207)
137 2yxe_A Protein-L-isoaspartate 99.3 1.2E-11 4.2E-16 124.8 11.1 139 25-182 37-180 (215)
138 2fpo_A Methylase YHHF; structu 99.3 1E-11 3.5E-16 124.9 10.5 106 68-182 54-163 (202)
139 1xdz_A Methyltransferase GIDB; 99.3 1.3E-11 4.3E-16 127.4 11.2 100 68-179 70-174 (240)
140 4e2x_A TCAB9; kijanose, tetron 99.3 2.2E-12 7.4E-17 144.2 5.6 105 67-181 106-210 (416)
141 3lpm_A Putative methyltransfer 99.3 4.5E-11 1.5E-15 124.8 14.8 121 56-179 39-176 (259)
142 2fhp_A Methylase, putative; al 99.3 1.4E-11 4.8E-16 121.0 10.3 124 51-184 29-159 (187)
143 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.8E-11 6.1E-16 124.2 11.1 115 68-182 38-156 (213)
144 1g6q_1 HnRNP arginine N-methyl 99.3 2.1E-11 7.2E-16 132.1 12.4 103 68-176 38-142 (328)
145 1ws6_A Methyltransferase; stru 99.2 5.7E-12 1.9E-16 121.8 6.7 107 68-184 41-152 (171)
146 1g8a_A Fibrillarin-like PRE-rR 99.2 6.2E-11 2.1E-15 120.8 14.4 123 46-178 51-177 (227)
147 4dcm_A Ribosomal RNA large sub 99.2 2.8E-11 9.5E-16 133.5 12.3 126 53-185 210-340 (375)
148 3g89_A Ribosomal RNA small sub 99.2 3.1E-11 1.1E-15 125.7 11.8 101 67-179 79-184 (249)
149 2r3s_A Uncharacterized protein 99.2 5E-11 1.7E-15 128.7 13.8 107 68-182 165-274 (335)
150 3fpf_A Mtnas, putative unchara 99.2 2.3E-11 7.8E-16 128.9 10.7 162 541-753 121-287 (298)
151 2nxc_A L11 mtase, ribosomal pr 99.2 3.5E-11 1.2E-15 125.5 11.8 104 67-183 119-222 (254)
152 3dp7_A SAM-dependent methyltra 99.2 4.3E-11 1.5E-15 131.4 12.9 106 68-181 179-289 (363)
153 3id6_C Fibrillarin-like rRNA/T 99.2 8.4E-11 2.9E-15 120.9 14.2 124 46-179 54-181 (232)
154 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.2E-10 4.3E-15 120.5 15.6 117 52-184 83-203 (258)
155 1jg1_A PIMT;, protein-L-isoasp 99.2 3.9E-11 1.3E-15 123.2 11.3 138 24-181 50-191 (235)
156 3ntv_A MW1564 protein; rossman 99.2 5E-11 1.7E-15 122.4 11.6 116 51-179 57-176 (232)
157 2pjd_A Ribosomal RNA small sub 99.2 2.5E-11 8.5E-16 132.3 9.7 123 52-182 183-306 (343)
158 2ozv_A Hypothetical protein AT 99.2 2.2E-10 7.6E-15 119.8 16.4 122 57-181 28-172 (260)
159 4dzr_A Protein-(glutamine-N5) 99.2 6.1E-12 2.1E-16 126.0 4.2 125 53-181 17-166 (215)
160 3i53_A O-methyltransferase; CO 99.2 7.3E-11 2.5E-15 127.7 12.9 107 67-182 168-277 (332)
161 1u2z_A Histone-lysine N-methyl 99.2 3.1E-10 1.1E-14 126.7 18.3 116 53-179 230-359 (433)
162 1wy7_A Hypothetical protein PH 99.2 1.9E-10 6.6E-15 115.2 15.1 121 47-178 28-148 (207)
163 3mq2_A 16S rRNA methyltransfer 99.2 4.6E-11 1.6E-15 120.9 10.3 103 67-178 26-139 (218)
164 1ej0_A FTSJ; methyltransferase 99.2 9.3E-11 3.2E-15 113.1 12.0 108 67-184 21-141 (180)
165 1yb2_A Hypothetical protein TA 99.2 1.9E-10 6.4E-15 121.2 15.2 102 67-182 109-214 (275)
166 1ne2_A Hypothetical protein TA 99.2 7.3E-11 2.5E-15 117.9 11.4 99 67-180 50-148 (200)
167 4azs_A Methyltransferase WBDD; 99.2 3.1E-11 1.1E-15 140.4 9.7 108 68-181 66-175 (569)
168 3sso_A Methyltransferase; macr 99.2 4.3E-11 1.5E-15 131.2 10.0 98 68-182 216-327 (419)
169 1i9g_A Hypothetical protein RV 99.2 1.1E-10 3.7E-15 122.8 12.1 117 52-184 86-208 (280)
170 3gwz_A MMCR; methyltransferase 99.2 2.2E-10 7.6E-15 126.0 14.7 106 67-181 201-309 (369)
171 1x19_A CRTF-related protein; m 99.2 1.9E-10 6.5E-15 125.8 14.1 107 67-182 189-298 (359)
172 3lec_A NADB-rossmann superfami 99.1 3E-10 1E-14 116.3 14.3 127 67-205 20-149 (230)
173 1qzz_A RDMB, aclacinomycin-10- 99.1 1.6E-10 5.6E-15 126.8 13.1 105 67-180 181-288 (374)
174 1dl5_A Protein-L-isoaspartate 99.1 1.4E-10 4.8E-15 124.9 12.3 112 52-180 62-176 (317)
175 3u81_A Catechol O-methyltransf 99.1 9.5E-11 3.2E-15 119.2 10.2 120 52-182 45-173 (221)
176 3gnl_A Uncharacterized protein 99.1 2.9E-10 1E-14 117.3 13.9 143 67-225 20-165 (244)
177 3dr5_A Putative O-methyltransf 99.1 9.7E-11 3.3E-15 119.7 10.1 101 544-689 58-162 (221)
178 3dr5_A Putative O-methyltransf 99.1 1E-10 3.5E-15 119.5 10.3 102 68-179 56-163 (221)
179 3p2e_A 16S rRNA methylase; met 99.1 9.5E-11 3.2E-15 120.1 9.7 109 68-179 24-139 (225)
180 1i1n_A Protein-L-isoaspartate 99.1 2.4E-10 8.1E-15 116.3 12.7 114 53-181 63-184 (226)
181 3b3j_A Histone-arginine methyl 99.1 1E-10 3.6E-15 132.9 11.1 103 67-177 157-261 (480)
182 2igt_A SAM dependent methyltra 99.1 9.6E-11 3.3E-15 127.1 10.1 132 46-181 133-274 (332)
183 3bzb_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 119.3 14.6 106 67-179 78-205 (281)
184 3tfw_A Putative O-methyltransf 99.1 1.9E-10 6.5E-15 119.4 11.8 105 67-181 62-172 (248)
185 2gpy_A O-methyltransferase; st 99.1 1.4E-10 4.9E-15 118.7 10.6 118 49-180 38-161 (233)
186 3dou_A Ribosomal RNA large sub 99.1 3E-10 1E-14 113.3 12.7 106 67-184 24-144 (191)
187 1o9g_A RRNA methyltransferase; 99.1 1.7E-10 5.8E-15 119.6 11.3 114 68-182 51-217 (250)
188 3mcz_A O-methyltransferase; ad 99.1 1.4E-10 4.9E-15 126.3 11.1 107 69-181 180-289 (352)
189 3orh_A Guanidinoacetate N-meth 99.1 1.1E-10 3.7E-15 120.4 9.5 110 541-689 59-169 (236)
190 2plw_A Ribosomal RNA methyltra 99.1 3.6E-10 1.2E-14 112.5 13.1 108 67-184 21-159 (201)
191 2b3t_A Protein methyltransfera 99.1 8.3E-11 2.8E-15 123.9 8.6 110 68-179 109-238 (276)
192 3adn_A Spermidine synthase; am 99.1 1.8E-10 6.2E-15 122.8 11.2 109 68-179 83-198 (294)
193 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.8E-10 9.4E-15 117.8 12.2 114 68-181 49-175 (246)
194 2b25_A Hypothetical protein; s 99.1 2.3E-10 7.8E-15 124.1 12.0 120 52-186 92-226 (336)
195 3c3y_A Pfomt, O-methyltransfer 99.1 2.1E-10 7.2E-15 118.3 11.0 108 541-689 69-180 (237)
196 1tw3_A COMT, carminomycin 4-O- 99.1 2.9E-10 9.9E-15 124.2 12.6 106 67-181 182-290 (360)
197 3mb5_A SAM-dependent methyltra 99.1 3.2E-10 1.1E-14 117.5 12.1 115 52-183 80-198 (255)
198 3duw_A OMT, O-methyltransferas 99.1 1.6E-09 5.6E-14 109.8 17.2 107 542-691 58-168 (223)
199 1sui_A Caffeoyl-COA O-methyltr 99.1 3.4E-10 1.1E-14 117.6 12.1 108 541-689 78-189 (247)
200 3duw_A OMT, O-methyltransferas 99.1 2.2E-10 7.4E-15 116.3 10.4 117 52-181 45-169 (223)
201 3tr6_A O-methyltransferase; ce 99.1 1.8E-10 6.2E-15 117.0 9.8 117 52-181 51-176 (225)
202 2ip2_A Probable phenazine-spec 99.1 3.1E-10 1.1E-14 122.7 12.0 103 70-181 169-274 (334)
203 3kr9_A SAM-dependent methyltra 99.1 7.8E-10 2.7E-14 113.0 14.2 126 67-205 14-143 (225)
204 3tfw_A Putative O-methyltransf 99.1 4.2E-10 1.4E-14 116.8 12.5 105 542-691 63-171 (248)
205 3tm4_A TRNA (guanine N2-)-meth 99.1 1.2E-09 4.1E-14 120.4 16.6 128 52-186 205-336 (373)
206 2pbf_A Protein-L-isoaspartate 99.1 6.3E-10 2.2E-14 113.2 12.8 115 53-181 66-195 (227)
207 1r18_A Protein-L-isoaspartate( 99.1 3.1E-10 1.1E-14 115.7 10.5 114 52-181 69-196 (227)
208 3hp7_A Hemolysin, putative; st 99.1 1.5E-10 5.1E-15 122.8 8.2 97 68-178 85-184 (291)
209 2yvl_A TRMI protein, hypotheti 99.1 9.3E-10 3.2E-14 113.2 13.9 112 55-183 81-194 (248)
210 2bm8_A Cephalosporin hydroxyla 99.1 1.7E-10 5.8E-15 119.0 8.3 112 51-180 67-188 (236)
211 3giw_A Protein of unknown func 99.1 5.7E-10 1.9E-14 117.0 12.2 111 69-183 79-204 (277)
212 3ntv_A MW1564 protein; rossman 99.1 4.3E-10 1.5E-14 115.4 11.1 103 542-689 71-175 (232)
213 1ixk_A Methyltransferase; open 99.1 4.6E-10 1.6E-14 120.8 11.8 122 56-181 109-248 (315)
214 4hc4_A Protein arginine N-meth 99.1 4.1E-10 1.4E-14 123.7 11.5 102 68-176 83-186 (376)
215 3bwc_A Spermidine synthase; SA 99.1 4.4E-10 1.5E-14 120.4 11.3 110 68-181 95-212 (304)
216 3ajd_A Putative methyltransfer 99.0 3.9E-10 1.3E-14 118.9 10.2 123 56-182 74-214 (274)
217 3c3p_A Methyltransferase; NP_9 99.0 3.4E-10 1.2E-14 113.9 9.3 100 68-179 56-160 (210)
218 3r3h_A O-methyltransferase, SA 99.0 1.8E-10 6.3E-15 119.2 7.2 107 542-690 60-170 (242)
219 2ld4_A Anamorsin; methyltransf 99.0 1.3E-10 4.5E-15 113.5 5.8 87 67-179 11-101 (176)
220 3a27_A TYW2, uncharacterized p 99.0 1E-09 3.5E-14 115.6 12.9 103 67-182 118-222 (272)
221 3opn_A Putative hemolysin; str 99.0 6.5E-11 2.2E-15 122.0 3.5 97 68-179 37-137 (232)
222 3lst_A CALO1 methyltransferase 99.0 3.5E-10 1.2E-14 123.3 9.5 103 67-181 183-288 (348)
223 4dmg_A Putative uncharacterize 99.0 7.2E-10 2.5E-14 122.9 11.8 132 46-183 197-330 (393)
224 3c3p_A Methyltransferase; NP_9 99.0 7.2E-10 2.5E-14 111.5 10.6 100 542-689 56-159 (210)
225 3reo_A (ISO)eugenol O-methyltr 99.0 6.6E-10 2.3E-14 122.2 11.0 100 67-181 202-302 (368)
226 3frh_A 16S rRNA methylase; met 99.0 2.7E-09 9.2E-14 109.2 14.6 103 67-179 104-206 (253)
227 2b78_A Hypothetical protein SM 99.0 6E-10 2.1E-14 123.3 10.6 132 46-182 195-334 (385)
228 3tr6_A O-methyltransferase; ce 99.0 5.8E-09 2E-13 105.7 17.0 108 542-691 64-175 (225)
229 1o54_A SAM-dependent O-methylt 99.0 1.1E-09 3.9E-14 115.2 12.0 112 55-183 102-217 (277)
230 2nyu_A Putative ribosomal RNA 99.0 6.3E-10 2.2E-14 110.2 9.4 108 67-184 21-150 (196)
231 3r3h_A O-methyltransferase, SA 99.0 1.5E-10 5.1E-15 119.9 4.7 117 52-181 47-172 (242)
232 2hnk_A SAM-dependent O-methylt 99.0 8E-10 2.7E-14 113.7 10.1 117 51-180 46-182 (239)
233 2f8l_A Hypothetical protein LM 99.0 5.5E-09 1.9E-13 113.7 17.2 158 67-226 129-307 (344)
234 1sui_A Caffeoyl-COA O-methyltr 99.0 7.3E-10 2.5E-14 115.1 9.6 102 68-179 79-190 (247)
235 1fp1_D Isoliquiritigenin 2'-O- 99.0 6.9E-10 2.3E-14 122.1 9.9 100 67-181 208-308 (372)
236 3p9c_A Caffeic acid O-methyltr 99.0 1.5E-09 5.3E-14 119.1 12.6 101 67-182 200-301 (364)
237 1xj5_A Spermidine synthase 1; 99.0 1.2E-09 4.1E-14 118.5 11.5 108 68-178 120-234 (334)
238 1uir_A Polyamine aminopropyltr 99.0 1.3E-09 4.5E-14 117.2 11.7 112 68-180 77-196 (314)
239 1mjf_A Spermidine synthase; sp 99.0 1.2E-09 4E-14 115.8 11.0 107 68-179 75-193 (281)
240 1iy9_A Spermidine synthase; ro 99.0 1.7E-09 5.9E-14 114.1 12.1 110 68-181 75-191 (275)
241 2wa2_A Non-structural protein 99.0 1.6E-10 5.4E-15 122.1 4.1 108 67-181 81-195 (276)
242 1fp2_A Isoflavone O-methyltran 99.0 6E-10 2.1E-14 121.6 8.8 100 67-181 187-290 (352)
243 3c0k_A UPF0064 protein YCCW; P 99.0 1.5E-09 5.2E-14 120.5 12.2 131 46-182 204-342 (396)
244 3v97_A Ribosomal RNA large sub 99.0 1.2E-09 4E-14 129.8 11.9 129 46-181 523-659 (703)
245 2o07_A Spermidine synthase; st 99.0 1.1E-09 3.8E-14 117.3 10.6 108 68-179 95-209 (304)
246 2as0_A Hypothetical protein PH 99.0 7.6E-10 2.6E-14 122.9 9.6 115 68-182 217-338 (396)
247 2i7c_A Spermidine synthase; tr 99.0 1.4E-09 4.8E-14 115.2 11.1 110 68-180 78-193 (283)
248 2avd_A Catechol-O-methyltransf 99.0 1.6E-09 5.5E-14 110.2 10.9 107 541-689 68-178 (229)
249 3k6r_A Putative transferase PH 99.0 2E-09 6.8E-14 113.6 11.7 120 46-183 108-229 (278)
250 4dzr_A Protein-(glutamine-N5) 99.0 1.2E-09 3.9E-14 109.3 9.5 160 541-731 29-206 (215)
251 3gjy_A Spermidine synthase; AP 99.0 1.5E-09 5E-14 116.5 10.6 110 70-182 91-203 (317)
252 2h00_A Methyltransferase 10 do 99.0 6.6E-10 2.3E-14 115.2 7.8 126 52-178 47-191 (254)
253 3cbg_A O-methyltransferase; cy 99.0 1.8E-09 6.3E-14 110.7 10.9 108 542-691 72-183 (232)
254 1zq9_A Probable dimethyladenos 99.0 1E-09 3.4E-14 116.5 9.2 90 51-147 14-105 (285)
255 2oxt_A Nucleoside-2'-O-methylt 99.0 1.6E-10 5.6E-15 121.3 3.1 108 67-181 73-187 (265)
256 2b2c_A Spermidine synthase; be 99.0 1.4E-09 4.8E-14 117.0 10.4 107 68-179 108-222 (314)
257 3dxy_A TRNA (guanine-N(7)-)-me 99.0 4.1E-09 1.4E-13 107.3 13.3 133 542-708 34-166 (218)
258 1inl_A Spermidine synthase; be 99.0 2.3E-09 7.8E-14 114.4 11.9 111 68-181 90-207 (296)
259 2pt6_A Spermidine synthase; tr 99.0 2.2E-09 7.7E-14 115.8 11.9 109 68-181 116-232 (321)
260 2avd_A Catechol-O-methyltransf 99.0 1.5E-09 5.1E-14 110.5 9.7 116 52-180 56-180 (229)
261 1nv8_A HEMK protein; class I a 99.0 4.2E-09 1.4E-13 111.7 13.5 109 68-179 123-249 (284)
262 3lcv_B Sisomicin-gentamicin re 98.9 1.6E-09 5.5E-14 111.8 9.3 131 68-206 132-273 (281)
263 3c3y_A Pfomt, O-methyltransfer 98.9 2.7E-09 9.1E-14 110.0 10.4 103 67-179 69-181 (237)
264 3cbg_A O-methyltransferase; cy 98.9 2.7E-09 9.3E-14 109.4 10.4 117 52-181 59-184 (232)
265 3u81_A Catechol O-methyltransf 98.9 2.7E-09 9.2E-14 108.4 10.1 112 542-693 58-173 (221)
266 2ozv_A Hypothetical protein AT 98.9 9.4E-09 3.2E-13 107.4 13.9 159 541-730 35-211 (260)
267 2qm3_A Predicted methyltransfe 98.9 3.5E-09 1.2E-13 116.7 11.0 102 68-179 172-277 (373)
268 4a6d_A Hydroxyindole O-methylt 98.9 1.1E-08 3.9E-13 111.7 14.9 106 67-181 178-285 (353)
269 2yxl_A PH0851 protein, 450AA l 98.9 7.6E-09 2.6E-13 116.8 13.5 125 55-182 249-392 (450)
270 2gpy_A O-methyltransferase; st 98.9 4.1E-09 1.4E-13 107.7 10.1 104 542-690 54-160 (233)
271 2hnk_A SAM-dependent O-methylt 98.9 5.4E-09 1.9E-13 107.4 10.6 116 542-690 60-181 (239)
272 1sqg_A SUN protein, FMU protei 98.9 7.6E-09 2.6E-13 116.1 12.2 126 53-181 234-376 (429)
273 1zg3_A Isoflavanone 4'-O-methy 98.9 3.1E-09 1.1E-13 116.2 8.5 99 68-181 193-295 (358)
274 2yx1_A Hypothetical protein MJ 98.9 9.1E-09 3.1E-13 111.7 12.0 99 68-183 195-295 (336)
275 3m6w_A RRNA methylase; rRNA me 98.9 2.9E-09 9.9E-14 120.0 8.3 124 55-181 91-231 (464)
276 1yzh_A TRNA (guanine-N(7)-)-me 98.8 1.6E-08 5.4E-13 102.1 12.9 132 542-708 41-172 (214)
277 1wxx_A TT1595, hypothetical pr 98.8 2.7E-09 9.1E-14 118.0 7.7 114 68-182 209-328 (382)
278 3p9n_A Possible methyltransfer 98.8 1.8E-08 6.2E-13 99.4 12.8 109 542-694 44-157 (189)
279 2fca_A TRNA (guanine-N(7)-)-me 98.8 2.7E-08 9.3E-13 100.6 14.4 132 542-708 38-169 (213)
280 1dus_A MJ0882; hypothetical pr 98.8 1.8E-08 6.2E-13 98.7 12.6 138 542-728 52-192 (194)
281 2p41_A Type II methyltransfera 98.8 1.6E-09 5.6E-14 116.0 5.3 108 67-182 81-194 (305)
282 3e05_A Precorrin-6Y C5,15-meth 98.8 1.2E-08 4.3E-13 101.8 11.4 117 541-708 39-158 (204)
283 2okc_A Type I restriction enzy 98.8 2.9E-08 9.9E-13 111.9 15.7 173 45-226 152-359 (445)
284 2h1r_A Dimethyladenosine trans 98.8 9.9E-09 3.4E-13 109.6 11.3 89 51-146 28-117 (299)
285 2cmg_A Spermidine synthase; tr 98.8 6.2E-09 2.1E-13 109.1 9.2 95 68-179 72-171 (262)
286 3hm2_A Precorrin-6Y C5,15-meth 98.8 4.2E-08 1.4E-12 95.1 14.4 126 541-715 24-150 (178)
287 2frx_A Hypothetical protein YE 98.8 1.6E-08 5.6E-13 114.7 12.6 114 68-181 117-248 (479)
288 1zx0_A Guanidinoacetate N-meth 98.8 1.9E-08 6.6E-13 103.0 11.6 109 541-688 59-168 (236)
289 1xdz_A Methyltransferase GIDB; 98.8 2E-08 6.7E-13 103.4 11.3 119 542-707 70-191 (240)
290 2ih2_A Modification methylase 98.8 2.3E-08 7.8E-13 111.3 12.7 120 49-181 23-166 (421)
291 3lpm_A Putative methyltransfer 98.8 2.9E-08 9.9E-13 103.4 12.3 153 542-729 49-217 (259)
292 3mb5_A SAM-dependent methyltra 98.8 3.6E-08 1.2E-12 101.9 12.5 122 541-715 92-220 (255)
293 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.5E-08 5.1E-13 114.1 10.1 125 55-182 95-237 (456)
294 3evz_A Methyltransferase; NYSG 98.8 5E-08 1.7E-12 99.1 13.2 156 541-731 54-221 (230)
295 4gek_A TRNA (CMO5U34)-methyltr 98.7 4.6E-08 1.6E-12 102.4 12.4 102 541-689 69-177 (261)
296 2esr_A Methyltransferase; stru 98.7 2.9E-08 9.8E-13 96.7 10.1 108 542-694 31-142 (177)
297 3ajd_A Putative methyltransfer 98.7 7.3E-08 2.5E-12 101.4 13.9 141 542-716 83-237 (274)
298 3ckk_A TRNA (guanine-N(7)-)-me 98.7 4.2E-08 1.4E-12 101.0 11.6 133 541-707 45-183 (235)
299 2vdv_E TRNA (guanine-N(7)-)-me 98.7 6.8E-08 2.3E-12 99.8 13.1 129 542-707 49-188 (246)
300 2jjq_A Uncharacterized RNA met 98.7 4.6E-08 1.6E-12 109.4 12.7 99 67-179 289-387 (425)
301 1qam_A ERMC' methyltransferase 98.7 3.5E-08 1.2E-12 102.2 10.8 85 52-143 17-102 (244)
302 3njr_A Precorrin-6Y methylase; 98.7 1.3E-07 4.3E-12 95.1 14.6 115 541-709 54-171 (204)
303 2qy6_A UPF0209 protein YFCK; s 98.7 2.4E-08 8.3E-13 104.2 9.6 149 541-731 59-248 (257)
304 1uwv_A 23S rRNA (uracil-5-)-me 98.7 2.2E-07 7.4E-12 104.4 17.7 131 54-201 275-410 (433)
305 3gru_A Dimethyladenosine trans 98.7 3.4E-08 1.2E-12 105.1 10.4 90 51-146 36-125 (295)
306 2bm8_A Cephalosporin hydroxyla 98.7 1E-08 3.4E-13 105.7 6.0 99 543-690 82-187 (236)
307 3g89_A Ribosomal RNA small sub 98.7 8.2E-08 2.8E-12 99.7 13.0 120 541-707 79-201 (249)
308 3m6w_A RRNA methylase; rRNA me 98.7 8.2E-08 2.8E-12 108.2 13.9 137 541-715 100-254 (464)
309 1l3i_A Precorrin-6Y methyltran 98.7 1.5E-07 5.2E-12 91.9 14.1 119 541-709 32-152 (192)
310 2b3t_A Protein methyltransfera 98.7 9E-08 3.1E-12 100.6 13.0 147 542-728 109-274 (276)
311 2xyq_A Putative 2'-O-methyl tr 98.7 3.6E-08 1.2E-12 104.5 9.6 102 67-184 62-176 (290)
312 3dlc_A Putative S-adenosyl-L-m 98.7 1E-07 3.5E-12 95.3 12.3 107 543-693 44-151 (219)
313 2igt_A SAM dependent methyltra 98.7 1.5E-07 5E-12 102.0 14.2 132 541-709 152-291 (332)
314 1yub_A Ermam, rRNA methyltrans 98.7 1.7E-09 5.9E-14 111.9 -1.0 120 51-179 15-145 (245)
315 4df3_A Fibrillarin-like rRNA/T 98.7 2.1E-07 7.1E-12 95.5 14.4 144 541-728 76-230 (233)
316 1jsx_A Glucose-inhibited divis 98.7 6.2E-08 2.1E-12 96.7 10.2 104 543-694 66-169 (207)
317 1ws6_A Methyltransferase; stru 98.7 4.8E-08 1.6E-12 94.0 8.9 109 542-694 41-151 (171)
318 3eey_A Putative rRNA methylase 98.7 3.7E-08 1.3E-12 97.6 8.3 119 541-693 21-142 (197)
319 2pwy_A TRNA (adenine-N(1)-)-me 98.6 8.7E-08 3E-12 98.9 11.0 120 541-710 95-217 (258)
320 3mti_A RRNA methylase; SAM-dep 98.6 2.9E-08 1E-12 97.3 7.1 114 541-693 21-138 (185)
321 3ldu_A Putative methylase; str 98.6 6.4E-08 2.2E-12 107.0 10.5 122 52-181 182-346 (385)
322 1fbn_A MJ fibrillarin homologu 98.6 2.8E-07 9.6E-12 94.0 14.5 144 542-729 74-227 (230)
323 2p35_A Trans-aconitate 2-methy 98.6 8.5E-08 2.9E-12 98.9 10.4 104 541-693 32-135 (259)
324 1g8a_A Fibrillarin-like PRE-rR 98.6 2.5E-07 8.4E-12 94.0 13.6 143 542-728 73-225 (227)
325 2fhp_A Methylase, putative; al 98.6 1.4E-07 4.7E-12 92.2 11.3 111 542-693 44-157 (187)
326 1yb2_A Hypothetical protein TA 98.6 5.9E-08 2E-12 102.0 9.2 117 541-708 109-227 (275)
327 3k0b_A Predicted N6-adenine-sp 98.6 1.1E-07 3.7E-12 105.4 11.7 122 52-181 188-352 (393)
328 3dtn_A Putative methyltransfer 98.6 1.4E-07 4.9E-12 95.9 11.6 106 541-693 43-151 (234)
329 4dcm_A Ribosomal RNA large sub 98.6 1.7E-07 5.8E-12 103.2 13.0 142 543-729 223-367 (375)
330 3dh0_A SAM dependent methyltra 98.6 1.5E-07 5.1E-12 94.6 11.1 147 541-731 36-194 (219)
331 3tqs_A Ribosomal RNA small sub 98.6 1.3E-07 4.5E-12 98.5 10.8 86 51-143 15-104 (255)
332 3ldg_A Putative uncharacterize 98.6 2.1E-07 7E-12 102.8 12.9 122 52-181 181-345 (384)
333 1ixk_A Methyltransferase; open 98.6 1.9E-07 6.6E-12 100.3 12.3 132 541-710 117-266 (315)
334 2b25_A Hypothetical protein; s 98.6 1.6E-07 5.6E-12 101.5 11.7 120 541-708 104-235 (336)
335 2ift_A Putative methylase HI07 98.6 6E-08 2E-12 97.1 7.6 109 543-694 54-167 (201)
336 3bt7_A TRNA (uracil-5-)-methyl 98.6 1.4E-07 4.7E-12 103.7 11.0 116 54-187 203-334 (369)
337 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.8E-07 6.1E-12 105.3 11.8 133 541-710 104-254 (456)
338 3mgg_A Methyltransferase; NYSG 98.6 1.1E-07 3.8E-12 99.3 9.3 107 541-690 36-142 (276)
339 2fpo_A Methylase YHHF; structu 98.6 1.2E-07 4E-12 95.1 9.0 106 543-692 55-162 (202)
340 3g5l_A Putative S-adenosylmeth 98.6 2.3E-07 7.7E-12 95.7 11.3 104 541-691 43-146 (253)
341 1o54_A SAM-dependent O-methylt 98.6 2.1E-07 7.1E-12 97.8 11.2 117 541-710 111-232 (277)
342 3jwh_A HEN1; methyltransferase 98.6 2.2E-07 7.6E-12 93.5 10.9 106 541-690 28-141 (217)
343 3h2b_A SAM-dependent methyltra 98.6 6.8E-07 2.3E-11 88.8 14.3 141 543-731 42-196 (203)
344 2qfm_A Spermine synthase; sper 98.6 1.6E-07 5.5E-12 101.9 10.1 114 68-181 188-316 (364)
345 3hem_A Cyclopropane-fatty-acyl 98.5 2.5E-07 8.5E-12 98.3 11.5 112 541-695 71-188 (302)
346 2qm3_A Predicted methyltransfe 98.5 1.9E-07 6.6E-12 102.7 10.7 105 542-692 172-280 (373)
347 2gb4_A Thiopurine S-methyltran 98.5 1.6E-07 5.5E-12 97.7 9.5 105 542-688 68-189 (252)
348 3dli_A Methyltransferase; PSI- 98.5 3.2E-07 1.1E-11 93.9 11.6 105 541-694 40-144 (240)
349 3kkz_A Uncharacterized protein 98.5 2.4E-07 8.2E-12 96.4 10.8 104 541-691 45-151 (267)
350 3lbf_A Protein-L-isoaspartate 98.5 3E-07 1E-11 91.9 11.1 101 541-692 76-176 (210)
351 4htf_A S-adenosylmethionine-de 98.5 1.6E-07 5.5E-12 98.8 9.5 110 542-695 68-178 (285)
352 1pjz_A Thiopurine S-methyltran 98.5 1.5E-07 5E-12 94.4 8.7 104 541-686 21-136 (203)
353 3grz_A L11 mtase, ribosomal pr 98.5 2.3E-07 7.9E-12 92.5 10.1 120 541-711 59-179 (205)
354 1nt2_A Fibrillarin-like PRE-rR 98.5 6.6E-07 2.3E-11 90.3 13.5 140 541-728 56-208 (210)
355 3f4k_A Putative methyltransfer 98.5 2.8E-07 9.6E-12 95.0 11.0 104 541-691 45-151 (257)
356 3cvo_A Methyltransferase-like 98.5 4.1E-07 1.4E-11 91.2 11.7 119 542-693 30-158 (202)
357 2p7i_A Hypothetical protein; p 98.5 1.9E-07 6.4E-12 95.2 9.5 103 542-694 42-145 (250)
358 2yvl_A TRMI protein, hypotheti 98.5 2E-07 6.9E-12 95.5 9.8 117 542-712 91-210 (248)
359 3fut_A Dimethyladenosine trans 98.5 5.9E-07 2E-11 94.4 13.3 88 51-146 33-121 (271)
360 3ocj_A Putative exported prote 98.5 3.4E-07 1.2E-11 97.5 11.7 112 541-693 117-230 (305)
361 3a27_A TYW2, uncharacterized p 98.5 1.8E-07 6E-12 98.4 9.3 121 542-710 119-242 (272)
362 3cgg_A SAM-dependent methyltra 98.5 1.6E-06 5.4E-11 84.7 15.6 123 541-710 45-168 (195)
363 2nxc_A L11 mtase, ribosomal pr 98.5 4.5E-07 1.5E-11 94.3 12.2 121 541-713 119-240 (254)
364 2yxd_A Probable cobalt-precorr 98.5 1.8E-06 6.1E-11 83.5 15.8 115 541-709 34-148 (183)
365 3ofk_A Nodulation protein S; N 98.5 7.1E-07 2.4E-11 89.5 13.2 128 541-717 50-188 (216)
366 1i9g_A Hypothetical protein RV 98.5 3.7E-07 1.3E-11 95.6 11.6 117 541-707 98-218 (280)
367 3jwg_A HEN1, methyltransferase 98.5 2.1E-07 7.2E-12 93.7 9.3 106 541-690 28-141 (219)
368 3g07_A 7SK snRNA methylphospha 98.5 2.8E-07 9.6E-12 97.8 10.6 45 542-586 46-90 (292)
369 1vl5_A Unknown conserved prote 98.5 3.1E-07 1E-11 95.2 10.6 104 541-689 36-139 (260)
370 4hg2_A Methyltransferase type 98.5 2.3E-07 7.9E-12 96.8 9.6 101 541-693 38-138 (257)
371 3ou2_A SAM-dependent methyltra 98.5 3.2E-07 1.1E-11 91.8 10.2 105 541-696 45-152 (218)
372 2frn_A Hypothetical protein PH 98.5 2.1E-07 7.3E-12 98.1 9.3 119 542-709 125-248 (278)
373 3i9f_A Putative type 11 methyl 98.5 5.8E-07 2E-11 86.6 11.5 136 541-731 16-161 (170)
374 3ujc_A Phosphoethanolamine N-m 98.5 2.1E-07 7.2E-12 96.2 8.6 109 541-693 54-162 (266)
375 1nkv_A Hypothetical protein YJ 98.5 3.7E-07 1.3E-11 94.1 10.5 103 541-690 35-140 (256)
376 3hnr_A Probable methyltransfer 98.5 2.1E-06 7.1E-11 86.2 15.7 101 541-692 44-147 (220)
377 3kr9_A SAM-dependent methyltra 98.5 2.3E-07 7.8E-12 94.7 8.6 139 542-731 15-159 (225)
378 1ej0_A FTSJ; methyltransferase 98.5 6.3E-07 2.1E-11 85.9 11.3 132 541-716 21-160 (180)
379 1ve3_A Hypothetical protein PH 98.5 1.7E-07 5.8E-12 94.5 7.7 107 542-692 38-144 (227)
380 2frx_A Hypothetical protein YE 98.5 5.6E-07 1.9E-11 102.1 12.6 132 542-710 117-266 (479)
381 3e8s_A Putative SAM dependent 98.5 9.5E-07 3.2E-11 88.7 12.8 105 541-693 51-155 (227)
382 3l8d_A Methyltransferase; stru 98.5 5.1E-07 1.7E-11 92.1 10.7 105 541-693 52-156 (242)
383 2pxx_A Uncharacterized protein 98.5 2.4E-07 8.1E-12 92.4 8.1 113 541-693 41-162 (215)
384 2ar0_A M.ecoki, type I restric 98.5 1.2E-06 4E-11 101.1 14.8 175 45-226 150-364 (541)
385 2ex4_A Adrenal gland protein A 98.5 2.8E-07 9.6E-12 94.4 8.6 107 542-690 79-185 (241)
386 3lec_A NADB-rossmann superfami 98.4 3.3E-07 1.1E-11 93.8 8.6 140 541-731 20-165 (230)
387 3ccf_A Cyclopropane-fatty-acyl 98.4 7.8E-07 2.7E-11 93.2 11.8 103 541-694 56-158 (279)
388 3bus_A REBM, methyltransferase 98.4 1.8E-06 6E-11 89.9 14.4 106 541-692 60-168 (273)
389 2b78_A Hypothetical protein SM 98.4 5.5E-07 1.9E-11 99.5 11.0 134 543-710 213-350 (385)
390 3gwz_A MMCR; methyltransferase 98.4 5.1E-06 1.7E-10 91.0 18.7 103 541-690 201-307 (369)
391 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1.1E-06 3.9E-11 94.0 13.1 120 57-181 94-236 (309)
392 3gu3_A Methyltransferase; alph 98.4 4.9E-07 1.7E-11 95.3 10.0 107 541-692 21-128 (284)
393 3ftd_A Dimethyladenosine trans 98.4 8.9E-07 3E-11 91.9 11.8 76 51-133 17-92 (249)
394 1nv8_A HEMK protein; class I a 98.4 1.2E-06 4.3E-11 92.6 13.0 142 543-729 124-281 (284)
395 1wxx_A TT1595, hypothetical pr 98.4 1.3E-06 4.4E-11 96.4 13.6 115 543-694 210-329 (382)
396 2pbf_A Protein-L-isoaspartate 98.4 2.4E-07 8.3E-12 93.9 7.1 106 542-692 80-195 (227)
397 3e23_A Uncharacterized protein 98.4 1.3E-06 4.3E-11 87.4 12.1 125 541-715 42-180 (211)
398 2fk8_A Methoxy mycolic acid sy 98.4 7.1E-07 2.4E-11 95.4 10.9 110 541-695 89-199 (318)
399 3g5t_A Trans-aconitate 3-methy 98.4 3.5E-07 1.2E-11 97.0 8.4 110 541-688 35-147 (299)
400 2yqz_A Hypothetical protein TT 98.4 6.3E-07 2.1E-11 92.5 10.0 104 541-690 38-141 (263)
401 1xxl_A YCGJ protein; structura 98.4 6.7E-07 2.3E-11 91.6 10.0 105 541-690 20-124 (239)
402 3pfg_A N-methyltransferase; N, 98.4 5.5E-07 1.9E-11 93.4 9.3 99 541-690 49-151 (263)
403 2dul_A N(2),N(2)-dimethylguano 98.4 3.5E-07 1.2E-11 100.7 8.1 101 68-179 47-164 (378)
404 2qe6_A Uncharacterized protein 98.4 6E-06 2.1E-10 86.8 17.4 118 542-694 77-200 (274)
405 2yxl_A PH0851 protein, 450AA l 98.4 7.8E-07 2.7E-11 100.3 11.1 134 542-711 259-410 (450)
406 3bxo_A N,N-dimethyltransferase 98.4 9E-07 3.1E-11 89.9 10.3 106 541-693 39-144 (239)
407 1kpg_A CFA synthase;, cyclopro 98.4 1.3E-06 4.4E-11 91.8 11.7 109 541-694 63-172 (287)
408 3bkw_A MLL3908 protein, S-aden 98.4 1.3E-06 4.4E-11 89.0 11.2 104 541-691 42-145 (243)
409 4dmg_A Putative uncharacterize 98.4 2.3E-06 7.7E-11 94.8 13.9 107 543-693 215-329 (393)
410 3khk_A Type I restriction-modi 98.4 4.6E-06 1.6E-10 96.0 17.0 172 47-226 227-448 (544)
411 2as0_A Hypothetical protein PH 98.4 2E-06 6.8E-11 95.3 13.4 116 542-693 217-338 (396)
412 2gs9_A Hypothetical protein TT 98.4 7.6E-07 2.6E-11 88.9 9.1 103 542-696 36-138 (211)
413 1i1n_A Protein-L-isoaspartate 98.4 3.7E-07 1.3E-11 92.5 6.9 105 541-694 76-186 (226)
414 3ggd_A SAM-dependent methyltra 98.4 2E-06 7E-11 88.0 12.5 112 541-693 55-166 (245)
415 2yxe_A Protein-L-isoaspartate 98.4 6.1E-07 2.1E-11 90.0 8.3 104 541-693 76-180 (215)
416 3id6_C Fibrillarin-like rRNA/T 98.4 2.4E-06 8.1E-11 87.7 12.8 141 541-729 75-230 (232)
417 3g2m_A PCZA361.24; SAM-depende 98.4 4.2E-07 1.4E-11 96.4 7.4 107 542-695 82-195 (299)
418 2dul_A N(2),N(2)-dimethylguano 98.4 9.1E-07 3.1E-11 97.4 10.3 102 543-690 48-164 (378)
419 1xtp_A LMAJ004091AAA; SGPP, st 98.4 8.4E-07 2.9E-11 91.1 9.5 107 541-691 92-198 (254)
420 3lcc_A Putative methyl chlorid 98.4 5.6E-07 1.9E-11 91.7 7.9 107 543-693 67-174 (235)
421 3dou_A Ribosomal RNA large sub 98.4 2.5E-06 8.7E-11 84.7 12.5 145 542-730 25-181 (191)
422 1sqg_A SUN protein, FMU protei 98.3 1.5E-06 5.2E-11 97.3 11.9 133 542-711 246-395 (429)
423 3gnl_A Uncharacterized protein 98.3 8.5E-07 2.9E-11 91.4 8.8 139 541-730 20-164 (244)
424 3sm3_A SAM-dependent methyltra 98.3 1.5E-06 5E-11 87.9 10.5 108 541-694 29-145 (235)
425 3c0k_A UPF0064 protein YCCW; P 98.3 2.6E-06 8.8E-11 94.4 13.3 120 543-694 221-343 (396)
426 2fyt_A Protein arginine N-meth 98.3 1.4E-06 4.8E-11 94.6 10.7 103 541-687 63-168 (340)
427 2xvm_A Tellurite resistance pr 98.3 1.3E-06 4.3E-11 86.1 9.5 104 542-689 32-135 (199)
428 3i53_A O-methyltransferase; CO 98.3 3.1E-06 1E-10 91.2 13.3 103 542-691 169-275 (332)
429 4fsd_A Arsenic methyltransfera 98.3 8.2E-07 2.8E-11 97.9 9.0 114 541-691 82-204 (383)
430 2ipx_A RRNA 2'-O-methyltransfe 98.3 6.1E-07 2.1E-11 91.6 7.2 107 542-692 77-184 (233)
431 2plw_A Ribosomal RNA methyltra 98.3 3.5E-06 1.2E-10 83.4 12.6 164 542-729 22-195 (201)
432 2o57_A Putative sarcosine dime 98.3 1.1E-06 3.6E-11 92.9 9.3 106 541-692 81-189 (297)
433 3q87_B N6 adenine specific DNA 98.3 3.1E-06 1E-10 82.2 11.8 136 542-730 23-162 (170)
434 4hc4_A Protein arginine N-meth 98.3 1.2E-06 4E-11 96.2 9.8 101 542-687 83-186 (376)
435 3uzu_A Ribosomal RNA small sub 98.3 1E-06 3.6E-11 92.9 9.1 76 51-133 28-106 (279)
436 1m6y_A S-adenosyl-methyltransf 98.3 9.2E-07 3.1E-11 94.3 8.7 90 51-143 12-106 (301)
437 3thr_A Glycine N-methyltransfe 98.3 1.5E-06 5E-11 91.6 10.2 117 541-692 56-177 (293)
438 3q7e_A Protein arginine N-meth 98.3 1.3E-06 4.4E-11 95.2 9.9 104 542-689 66-172 (349)
439 1r18_A Protein-L-isoaspartate( 98.3 8E-07 2.7E-11 90.3 7.7 102 542-692 84-196 (227)
440 1dl5_A Protein-L-isoaspartate 98.3 9.8E-07 3.3E-11 94.7 8.8 103 541-692 74-177 (317)
441 3vc1_A Geranyl diphosphate 2-C 98.3 1.4E-06 4.9E-11 92.9 10.0 106 541-693 116-224 (312)
442 1g6q_1 HnRNP arginine N-methyl 98.3 2.1E-06 7.3E-11 92.6 11.3 102 542-687 38-142 (328)
443 2y1w_A Histone-arginine methyl 98.3 1.2E-06 4.2E-11 95.3 9.5 103 542-690 50-155 (348)
444 3lkd_A Type I restriction-modi 98.3 1E-05 3.5E-10 93.0 17.6 179 43-225 196-409 (542)
445 3axs_A Probable N(2),N(2)-dime 98.3 9.2E-07 3.1E-11 97.6 8.4 101 68-179 52-158 (392)
446 2pjd_A Ribosomal RNA small sub 98.3 1.9E-06 6.6E-11 93.5 10.7 140 543-729 197-336 (343)
447 3dmg_A Probable ribosomal RNA 98.3 2.3E-06 7.7E-11 94.4 11.3 142 542-731 233-374 (381)
448 1jg1_A PIMT;, protein-L-isoasp 98.3 1.1E-06 3.8E-11 89.8 8.3 104 541-694 90-193 (235)
449 3evf_A RNA-directed RNA polyme 98.3 6E-07 2E-11 93.3 6.2 112 67-181 73-186 (277)
450 3d2l_A SAM-dependent methyltra 98.3 8.1E-07 2.8E-11 90.5 7.2 107 542-692 33-139 (243)
451 2aot_A HMT, histamine N-methyl 98.3 2.8E-06 9.4E-11 89.8 11.3 117 542-695 52-177 (292)
452 2kw5_A SLR1183 protein; struct 98.3 1.3E-06 4.4E-11 86.6 8.2 103 545-693 32-134 (202)
453 3r0q_C Probable protein argini 98.3 2.2E-06 7.5E-11 94.3 10.9 105 541-688 62-167 (376)
454 3m33_A Uncharacterized protein 98.3 5.2E-07 1.8E-11 91.7 5.2 92 541-687 47-139 (226)
455 1wzn_A SAM-dependent methyltra 98.3 1.4E-06 4.8E-11 89.5 8.4 108 541-692 40-147 (252)
456 3m70_A Tellurite resistance pr 98.3 1.5E-06 5.2E-11 91.3 8.8 104 542-690 120-223 (286)
457 1vbf_A 231AA long hypothetical 98.3 2.9E-06 1E-10 86.0 10.6 100 541-693 69-168 (231)
458 2p8j_A S-adenosylmethionine-de 98.3 1.3E-06 4.3E-11 87.0 7.5 109 541-693 22-131 (209)
459 2r3s_A Uncharacterized protein 98.2 9.6E-06 3.3E-10 87.1 14.9 102 541-690 164-271 (335)
460 2nyu_A Putative ribosomal RNA 98.2 4.1E-06 1.4E-10 82.5 10.9 128 542-716 22-169 (196)
461 1o9g_A RRNA methyltransferase; 98.2 4.5E-07 1.5E-11 93.7 4.1 46 542-587 51-98 (250)
462 1x19_A CRTF-related protein; m 98.2 1.2E-05 4.1E-10 87.6 15.7 100 541-689 189-294 (359)
463 3cc8_A Putative methyltransfer 98.2 1.3E-06 4.6E-11 87.7 7.4 103 541-693 31-133 (230)
464 1p91_A Ribosomal RNA large sub 98.2 1.2E-06 4.2E-11 91.1 7.3 99 541-694 84-182 (269)
465 3mq2_A 16S rRNA methyltransfer 98.2 1.1E-06 3.9E-11 88.3 6.8 110 541-690 26-140 (218)
466 3ll7_A Putative methyltransfer 98.2 8.8E-07 3E-11 98.1 6.2 74 68-142 93-170 (410)
467 3mcz_A O-methyltransferase; ad 98.2 2E-06 7E-11 93.2 9.0 104 543-690 180-287 (352)
468 3axs_A Probable N(2),N(2)-dime 98.2 2.1E-06 7E-11 94.8 9.1 103 542-690 52-158 (392)
469 2vdw_A Vaccinia virus capping 98.2 1.4E-06 4.6E-11 93.1 7.3 115 542-692 48-171 (302)
470 1ri5_A MRNA capping enzyme; me 98.2 2.1E-06 7E-11 90.3 8.6 114 541-693 63-177 (298)
471 1qzz_A RDMB, aclacinomycin-10- 98.2 1.3E-05 4.4E-10 87.6 15.1 102 541-691 181-288 (374)
472 2r6z_A UPF0341 protein in RSP 98.2 7.3E-07 2.5E-11 93.1 4.9 80 67-147 82-173 (258)
473 3k6r_A Putative transferase PH 98.2 6.2E-07 2.1E-11 94.5 4.2 101 541-690 124-225 (278)
474 1y8c_A S-adenosylmethionine-de 98.2 1E-06 3.5E-11 89.7 5.8 108 542-692 37-144 (246)
475 3tma_A Methyltransferase; thum 98.2 5.1E-06 1.7E-10 90.5 11.5 108 542-690 203-317 (354)
476 3dp7_A SAM-dependent methyltra 98.2 2E-06 6.9E-11 94.0 8.3 107 542-689 179-286 (363)
477 1qyr_A KSGA, high level kasuga 98.2 1.6E-06 5.6E-11 90.1 7.0 86 52-145 8-100 (252)
478 4a6d_A Hydroxyindole O-methylt 98.2 8.6E-06 3E-10 88.7 12.9 102 541-689 178-282 (353)
479 2ip2_A Probable phenazine-spec 98.2 4.8E-06 1.6E-10 89.6 10.6 103 544-690 169-272 (334)
480 1u2z_A Histone-lysine N-methyl 98.2 4.8E-06 1.6E-10 92.9 10.6 105 541-689 241-358 (433)
481 1wy7_A Hypothetical protein PH 98.2 2.5E-05 8.4E-10 77.7 14.6 116 542-707 49-164 (207)
482 3uwp_A Histone-lysine N-methyl 98.2 6.9E-06 2.4E-10 90.4 11.1 106 541-689 172-287 (438)
483 3sso_A Methyltransferase; macr 98.1 1.2E-06 4E-11 96.2 5.0 100 541-689 215-323 (419)
484 3o4f_A Spermidine synthase; am 98.1 1.8E-05 6.1E-10 83.6 13.9 109 68-179 83-198 (294)
485 3fzg_A 16S rRNA methylase; met 98.1 1.5E-06 5.2E-11 85.9 5.2 99 541-687 48-149 (200)
486 3gdh_A Trimethylguanosine synt 98.1 5E-07 1.7E-11 92.4 1.8 103 542-690 78-181 (241)
487 3ege_A Putative methyltransfer 98.1 1.9E-06 6.6E-11 89.4 6.3 99 541-691 33-131 (261)
488 2yx1_A Hypothetical protein MJ 98.1 2.4E-06 8.1E-11 92.6 7.0 112 542-709 195-307 (336)
489 3vyw_A MNMC2; tRNA wobble urid 98.1 6.3E-05 2.2E-09 79.7 17.5 148 540-732 94-262 (308)
490 1tw3_A COMT, carminomycin 4-O- 98.1 7.6E-06 2.6E-10 89.0 10.8 103 541-690 182-288 (360)
491 3gcz_A Polyprotein; flavivirus 98.1 1.5E-06 5.2E-11 90.4 4.9 116 67-185 89-209 (282)
492 2avn_A Ubiquinone/menaquinone 98.1 9.2E-06 3.1E-10 84.2 10.9 103 542-694 54-156 (260)
493 1ne2_A Hypothetical protein TA 98.1 1.9E-05 6.4E-10 78.3 12.6 95 542-688 51-145 (200)
494 3p2e_A 16S rRNA methylase; met 98.1 3.2E-06 1.1E-10 86.3 6.8 111 541-688 23-137 (225)
495 3bkx_A SAM-dependent methyltra 98.1 5.6E-06 1.9E-10 86.1 8.7 113 541-693 42-162 (275)
496 2k4m_A TR8_protein, UPF0146 pr 98.1 1E-05 3.4E-10 76.1 9.3 90 68-185 35-127 (153)
497 3b5i_A S-adenosyl-L-methionine 98.1 1.8E-05 6.3E-10 86.6 12.8 115 69-184 53-230 (374)
498 3bgv_A MRNA CAP guanine-N7 met 98.1 2.7E-06 9.3E-11 90.8 6.0 117 542-693 34-158 (313)
499 2h00_A Methyltransferase 10 do 98.1 2.1E-05 7.3E-10 81.0 12.4 60 542-603 65-127 (254)
500 3bzb_A Uncharacterized protein 98.1 2.2E-05 7.6E-10 82.6 12.7 109 542-693 79-208 (281)
No 1
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.93 E-value=3e-25 Score=238.13 Aligned_cols=182 Identities=20% Similarity=0.281 Sum_probs=153.0
Q ss_pred ecCCccchHHHHHHHHHHhhh--hhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC
Q 004133 510 VYHGYLASSYHMGIISGFTLI--SSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG 587 (772)
Q Consensus 510 ~d~~~L~~~Y~~~m~~~l~l~--~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg 587 (772)
-|+.++.+.||+.|+..+.++ .+ ..+++.+||+||+|+|.++++|.+.+|..+|++|||||.|+++|+++|+
T Consensus 61 ~dP~~le~~Y~e~m~~~~~~l~~~~------p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~ 134 (317)
T 3gjy_A 61 GQPQALEFEYMRWIATGARAFIDAH------QDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFD 134 (317)
T ss_dssp TCTTCCCSHHHHHHHHHHHHHHHHH------SCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSC
T ss_pred CCCcchhhHHHHHHHHHHHhhcccC------CCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcc
Confidence 357889999999999876652 12 1123449999999999999999998899999999999999999999999
Q ss_pred CCCCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC
Q 004133 588 FTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF 667 (772)
Q Consensus 588 ~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f 667 (772)
+..++|++++++||++|++... ..+||+||+|++.... ++..+
T Consensus 135 ~~~~~rv~v~~~Da~~~l~~~~-------------------------------~~~fDvIi~D~~~~~~------~~~~L 177 (317)
T 3gjy_A 135 IPRAPRVKIRVDDARMVAESFT-------------------------------PASRDVIIRDVFAGAI------TPQNF 177 (317)
T ss_dssp CCCTTTEEEEESCHHHHHHTCC-------------------------------TTCEEEEEECCSTTSC------CCGGG
T ss_pred ccCCCceEEEECcHHHHHhhcc-------------------------------CCCCCEEEECCCCccc------cchhh
Confidence 8778999999999999997653 3679999999876631 46889
Q ss_pred CcHHHHHHHHHccCCCcEEEEEecCCC-hhHHHHHHHHHHHhccceEEEeec------CCceEEEEEecCCCcC
Q 004133 668 VEGSFLLTVKDALSEQGLFIVNLVSRS-QATKDMVISRMKMVFNHLFCLQLE------EDVNLVLFGLSSESCI 734 (772)
Q Consensus 668 ~~~~fl~~~~~~L~~~Gilv~Nl~~~~-~~~~~~v~~~l~~vF~~v~~~~~~------~~~N~vl~a~~~~~~~ 734 (772)
++.+||+.++++|+|||+|++|+.+.. ......++.+|+++|+++..+... +..|.|++|++.+...
T Consensus 178 ~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~ 251 (317)
T 3gjy_A 178 TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDTEFFS 251 (317)
T ss_dssp SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESSCCCC
T ss_pred hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECCCCCc
Confidence 999999999999999999999997543 355678899999999999888642 5689999999887544
No 2
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.90 E-value=2.3e-23 Score=220.48 Aligned_cols=170 Identities=20% Similarity=0.345 Sum_probs=138.9
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc-----CCCC
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQ 590 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----g~~~ 590 (772)
.+.||..|+ +++|..+ ++|++|||||+|+|++++.+.++.+..+|++|||||.|+++|++|| |.-+
T Consensus 66 e~~YhE~l~-h~~l~~~--------p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~ 136 (294)
T 3o4f_A 66 EFIYHEMMT-HVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYD 136 (294)
T ss_dssp HHHHHHHHH-HHHHHHS--------SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG
T ss_pred HHHHHHHHH-HHHHhhC--------CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccC
Confidence 367887555 4555554 7899999999999999999999988889999999999999999998 3347
Q ss_pred CCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH
Q 004133 591 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 670 (772)
Q Consensus 591 ~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~ 670 (772)
|+|++++++||++||++.. .+||+||+|+.++. + |+..|++.
T Consensus 137 dpRv~v~~~Dg~~~l~~~~--------------------------------~~yDvIi~D~~dp~--~----~~~~L~t~ 178 (294)
T 3o4f_A 137 DPRFKLVIDDGVNFVNQTS--------------------------------QTFDVIISDCTDPI--G----PGESLFTS 178 (294)
T ss_dssp CTTEEEEESCTTTTTSCSS--------------------------------CCEEEEEESCCCCC--C----TTCCSSCC
T ss_pred CCcEEEEechHHHHHhhcc--------------------------------ccCCEEEEeCCCcC--C----CchhhcCH
Confidence 8999999999999987643 67999999887653 1 57889999
Q ss_pred HHHHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ec---CCceEEEEEecCCC
Q 004133 671 SFLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSES 732 (772)
Q Consensus 671 ~fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~vl~a~~~~~ 732 (772)
+|++.++++|+|+|+++++.-+. +......++++++++|+.+..+. ++ .+.....+|++...
T Consensus 179 eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~~~ 247 (294)
T 3o4f_A 179 AFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 247 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEESCTT
T ss_pred HHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEECCCc
Confidence 99999999999999999987554 34455678999999999876654 33 34556778887653
No 3
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.87 E-value=2.2e-21 Score=195.57 Aligned_cols=190 Identities=32% Similarity=0.609 Sum_probs=157.4
Q ss_pred CCCCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHH
Q 004133 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (772)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~ 103 (772)
.|...+||+++|........++|+..+..+...+..++ .++.+|||+|||+|.++..+++.|..+|+++|+|+.+
T Consensus 3 ~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~ 77 (215)
T 2pxx_A 3 GYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL-----RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVV 77 (215)
T ss_dssp GGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC-----CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHH
T ss_pred cccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc-----CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHH
Confidence 57789999999987743456889999888888887776 3578999999999999999999887679999999999
Q ss_pred HHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccccccCc--------cchHHHHHHHHHHHhccccCeEE
Q 004133 104 ISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPE--------LGHKLGNQYLSEVKRLLKSGGKF 175 (772)
Q Consensus 104 I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~--------~~~~~~~~~l~ei~rvLkpGG~~ 175 (772)
++.++++... .+++++.++|+.+++ +++++||+|++.++++++.... ........+++++.++|||||++
T Consensus 78 ~~~a~~~~~~-~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 155 (215)
T 2pxx_A 78 VAAMQACYAH-VPQLRWETMDVRKLD-FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRF 155 (215)
T ss_dssp HHHHHHHTTT-CTTCEEEECCTTSCC-SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHhccc-CCCcEEEEcchhcCC-CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEE
Confidence 9999887743 468999999999998 8889999999999998876211 01123689999999999999999
Q ss_pred EEEEcCchhhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEecCC
Q 004133 176 VCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 226 (772)
Q Consensus 176 ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~~ 226 (772)
++.++..+++...++......|.+....+. ...++|+|++++.+.
T Consensus 156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 200 (215)
T 2pxx_A 156 ISMTSAAPHFRTRHYAQAYYGWSLRHATYG------SGFHFHLYLMHKGGK 200 (215)
T ss_dssp EEEESCCHHHHHHHHCCGGGCEEEEEEEES------GGGCEEEEEEEETCC
T ss_pred EEEeCCCcHHHHHHHhccccCcEEEEEEec------CcceEEEEEEEeCCC
Confidence 999999998888777766668988877762 247788999988654
No 4
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.86 E-value=8.9e-21 Score=206.28 Aligned_cols=174 Identities=12% Similarity=0.102 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC--------
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-------- 588 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-------- 588 (772)
+.||++|+... +.. .++++|||||+|+|++++.+.++.+ .+|++|||||+|+++|++||..
T Consensus 190 ~~Y~e~l~h~~-l~~---------~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~ 258 (381)
T 3c6k_A 190 LAYTRAIMGSG-KED---------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 258 (381)
T ss_dssp HHHHHHHTTTT-CCC---------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred HHHHHHHHHHH-hhc---------CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhcc
Confidence 45888877543 332 3578999999999999999998855 6999999999999999999842
Q ss_pred CCCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC
Q 004133 589 TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV 668 (772)
Q Consensus 589 ~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~ 668 (772)
+.++|++++++||++||++... .+.+||+||+|+++...+.+...|+..++
T Consensus 259 pr~~rv~vii~Da~~fl~~~~~-----------------------------~~~~yDvIIvDl~D~~~s~~p~g~a~~Lf 309 (381)
T 3c6k_A 259 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPISTSPEEDSTWEF 309 (381)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCCCCC----CHHHH
T ss_pred ccccceeeehHHHHHHHHhhhh-----------------------------ccCceeEEEECCCCCcccCcccCcchHHH
Confidence 2357899999999999987541 13679999999987654444455677899
Q ss_pred cHHHHHHHHHccCCCcEEEEEecCC-ChhHHHHHHHHHHHhccceEEE----eecC--CceEEEEEecC
Q 004133 669 EGSFLLTVKDALSEQGLFIVNLVSR-SQATKDMVISRMKMVFNHLFCL----QLEE--DVNLVLFGLSS 730 (772)
Q Consensus 669 ~~~fl~~~~~~L~~~Gilv~Nl~~~-~~~~~~~v~~~l~~vF~~v~~~----~~~~--~~N~vl~a~~~ 730 (772)
+.+||+.++++|+|+|+++.+.-+. .......+.++++++|+.+... .++. +.....+|++.
T Consensus 310 t~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 310 LRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 9999999999999999999875333 2344567789999999976332 2232 34556666654
No 5
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.85 E-value=4.1e-20 Score=195.90 Aligned_cols=168 Identities=17% Similarity=0.288 Sum_probs=135.9
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc-----CCCC
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQ 590 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----g~~~ 590 (772)
.+.||+.|. .+++..+ +.+.+||+||+|+|.++..+..+.+..+|++||+||.|+++|+++| ++ .
T Consensus 58 e~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~ 127 (275)
T 1iy9_A 58 EFVYHEMVA-HVPLFTH--------PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-D 127 (275)
T ss_dssp HHHHHHHHH-HHHHHHS--------SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-T
T ss_pred hhHHHHHHH-HHHHhhC--------CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-C
Confidence 367888554 4444433 5678999999999999999998877789999999999999999998 44 5
Q ss_pred CCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH
Q 004133 591 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 670 (772)
Q Consensus 591 ~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~ 670 (772)
++|++++++||++|+.... .+||+|++|...+. .|+..+++.
T Consensus 128 ~~rv~v~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~ 169 (275)
T 1iy9_A 128 DPRVDVQVDDGFMHIAKSE--------------------------------NQYDVIMVDSTEPV------GPAVNLFTK 169 (275)
T ss_dssp STTEEEEESCSHHHHHTCC--------------------------------SCEEEEEESCSSCC------SCCCCCSTT
T ss_pred CCceEEEECcHHHHHhhCC--------------------------------CCeeEEEECCCCCC------CcchhhhHH
Confidence 7899999999999987632 57999999876532 267888999
Q ss_pred HHHHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ec---CCceEEEEEecCC
Q 004133 671 SFLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSE 731 (772)
Q Consensus 671 ~fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~vl~a~~~~ 731 (772)
+|++.++++|+|||++++|..+. +......++++++++|+++..+. ++ .+.+.+++|++..
T Consensus 170 ~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 170 GFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred HHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCCC
Confidence 99999999999999999997653 45667888999999999876654 33 3456678888753
No 6
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.83 E-value=2.7e-19 Score=193.17 Aligned_cols=185 Identities=15% Similarity=0.174 Sum_probs=140.9
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-----CC
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQ 590 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-----~~ 590 (772)
.+.||+.|.. +++..+ +.+.+||+||+|+|.++..+.++.|..+|++||+||.++++|+++|.. ..
T Consensus 60 e~~Y~e~l~~-~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~ 130 (314)
T 1uir_A 60 EYIYHETLVH-PAMLTH--------PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD 130 (314)
T ss_dssp HHHHHHHHHH-HHHHHS--------SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG
T ss_pred hhHHHHHHHH-HHHhcC--------CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc
Confidence 3568887653 344433 567899999999999999999987778999999999999999999842 13
Q ss_pred CCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH
Q 004133 591 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 670 (772)
Q Consensus 591 ~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~ 670 (772)
+++++++++|+.+++.... .+||+|++|..... ++.+|+..++..
T Consensus 131 ~~~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~---~~~~~~~~l~~~ 175 (314)
T 1uir_A 131 DPRAVLVIDDARAYLERTE--------------------------------ERYDVVIIDLTDPV---GEDNPARLLYTV 175 (314)
T ss_dssp CTTEEEEESCHHHHHHHCC--------------------------------CCEEEEEEECCCCB---STTCGGGGGSSH
T ss_pred CCceEEEEchHHHHHHhcC--------------------------------CCccEEEECCCCcc---cccCcchhccHH
Confidence 6899999999999987632 57999999875532 234577888899
Q ss_pred HHHHHHHHccCCCcEEEEEecCC---ChhHHHHHHHHHHHhccceEEEe--e--cCCceEEEEEecCCC--cCCCCcHHH
Q 004133 671 SFLLTVKDALSEQGLFIVNLVSR---SQATKDMVISRMKMVFNHLFCLQ--L--EEDVNLVLFGLSSES--CIKDNSFPE 741 (772)
Q Consensus 671 ~fl~~~~~~L~~~Gilv~Nl~~~---~~~~~~~v~~~l~~vF~~v~~~~--~--~~~~N~vl~a~~~~~--~~~~~~l~~ 741 (772)
+|++.++++|+|||+|++|..+. +......+.+.++++|+++..+. + ..+.+.+++|++... ......+.+
T Consensus 176 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~~~p~~~~~~~~~~ 255 (314)
T 1uir_A 176 EFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEA 255 (314)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESSSCTTCCCTTHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEECCCCcccCCHHHHHH
Confidence 99999999999999999997553 34567788999999999865543 2 344677889988732 333334544
Q ss_pred HHH
Q 004133 742 AAV 744 (772)
Q Consensus 742 ~a~ 744 (772)
+..
T Consensus 256 ~~~ 258 (314)
T 1uir_A 256 RIR 258 (314)
T ss_dssp HHH
T ss_pred Hhh
Confidence 433
No 7
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.80 E-value=2.5e-18 Score=182.65 Aligned_cols=166 Identities=23% Similarity=0.360 Sum_probs=130.3
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc----CCC--
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF----GFT-- 589 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F----g~~-- 589 (772)
.+.||+.|. .+++..+ +.+.+||+||+|+|.++..+..+ |..+|++||+||.++++|+++| ++.
T Consensus 58 ~~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~ 127 (281)
T 1mjf_A 58 ERSYHEPLV-HPAMLAH--------PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEA 127 (281)
T ss_dssp THHHHHHHH-HHHHHHS--------SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHH
T ss_pred chHHHHHHH-HHHHhhC--------CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccc
Confidence 366888765 3333332 45689999999999999999988 8789999999999999999999 321
Q ss_pred ----CCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc
Q 004133 590 ----QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA 665 (772)
Q Consensus 590 ----~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~ 665 (772)
.+++++++++|+.+++.. . .+||+|++|..... +|+.
T Consensus 128 ~~~~~~~~v~~~~~D~~~~l~~-~--------------------------------~~fD~Ii~d~~~~~------~~~~ 168 (281)
T 1mjf_A 128 MLNGKHEKAKLTIGDGFEFIKN-N--------------------------------RGFDVIIADSTDPV------GPAK 168 (281)
T ss_dssp HHTTCCSSEEEEESCHHHHHHH-C--------------------------------CCEEEEEEECCCCC----------
T ss_pred cccCCCCcEEEEECchHHHhcc-c--------------------------------CCeeEEEECCCCCC------Ccch
Confidence 468999999999999876 4 56999999876431 2567
Q ss_pred CCCcHHHHHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEee--c--CCceEEEEEecC
Q 004133 666 DFVEGSFLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQL--E--EDVNLVLFGLSS 730 (772)
Q Consensus 666 ~f~~~~fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~~--~--~~~N~vl~a~~~ 730 (772)
.+++.+|++.++++|+|||++++|..+. .......+.+.++++|+++..+.. + .+.+.+++|++.
T Consensus 169 ~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 169 VLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp -TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 7889999999999999999999997543 556677889999999998766542 3 356788999886
No 8
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.79 E-value=7.6e-18 Score=179.16 Aligned_cols=168 Identities=22% Similarity=0.327 Sum_probs=133.1
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC----CC
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QD 591 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~----~~ 591 (772)
.+.||. |++.+++..+ +.+.+||+||+|+|.++..+.++.|..+|++||+||.|+++|+++|... ++
T Consensus 61 e~~Y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~ 131 (283)
T 2i7c_A 61 EFAYHE-MMTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYED 131 (283)
T ss_dssp HHHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGS
T ss_pred hhhHHH-HHHHHHHhcC--------CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCC
Confidence 356876 5666665543 5678999999999999999998877789999999999999999998542 36
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHH
Q 004133 592 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 671 (772)
Q Consensus 592 ~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~ 671 (772)
++++++++|+.+++.... .+||+||+|.... . .|+..+++.+
T Consensus 132 ~~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~--~----~~~~~l~~~~ 173 (283)
T 2i7c_A 132 KRVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQN 173 (283)
T ss_dssp TTEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCT--T----TGGGGGSSHH
T ss_pred CcEEEEECChHHHHHhCC--------------------------------CCceEEEEcCCCC--C----CcchhhhHHH
Confidence 899999999999987642 5799999987543 2 2567788999
Q ss_pred HHHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ecC--Cce-EEEEEecC
Q 004133 672 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE--DVN-LVLFGLSS 730 (772)
Q Consensus 672 fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N-~vl~a~~~ 730 (772)
|++.++++|+|||++++|..+. .......++++++++|+++..+. ++. +.+ ..++|++.
T Consensus 174 ~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 174 FYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 9999999999999999997643 45566788999999999765443 443 244 47777765
No 9
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.79 E-value=1.5e-18 Score=181.58 Aligned_cols=144 Identities=18% Similarity=0.325 Sum_probs=112.8
Q ss_pred CCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHH
Q 004133 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (772)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~ 105 (772)
.+.+||+++|.... ..+.+....+.+...+...+.. .++.+|||+|||+|.++..|++.|+ +|+|||+|+.||+
T Consensus 31 ~~~~~Wd~~y~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~ 104 (252)
T 2gb4_A 31 LTLEDWKEKWVTRH--ISFHQEQGHQLLKKHLDTFLKG---QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIR 104 (252)
T ss_dssp CCHHHHHHHHHHTC--CTTCCTTCCHHHHHHHHHHHTT---CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHH
T ss_pred CCHHHHHHHHhcCC--CCcccCCCCHHHHHHHHHhccC---CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHH
Confidence 36899999998763 2222222233444544444321 3678999999999999999999998 7999999999999
Q ss_pred HHHHHhcc------------------CCCCcEEEEeeccCcccccC-CCccEEEecccccccccCccchHHHHHHHHHHH
Q 004133 106 DMLRRNVR------------------DRSDMRWRVMDMTSMQVFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVK 166 (772)
Q Consensus 106 ~a~~~~~~------------------~~~~v~f~~~D~~~l~~~~~-~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~ 166 (772)
.|++++.. ...+++|.++|+.+++ +.+ ++||+|++.++++++..++ ...+++++.
T Consensus 105 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~-~~~~~~FD~V~~~~~l~~l~~~~-----~~~~l~~~~ 178 (252)
T 2gb4_A 105 EFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP-RANIGKFDRIWDRGALVAINPGD-----HDRYADIIL 178 (252)
T ss_dssp HHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG-GGCCCCEEEEEESSSTTTSCGGG-----HHHHHHHHH
T ss_pred HHHHhcccccccccccccccccccccCCCceEEEECccccCC-cccCCCEEEEEEhhhhhhCCHHH-----HHHHHHHHH
Confidence 99877631 2468999999999998 664 8999999999999986543 678999999
Q ss_pred hccccCeEEEEEEcC
Q 004133 167 RLLKSGGKFVCLTLA 181 (772)
Q Consensus 167 rvLkpGG~~ii~~~~ 181 (772)
++|||||+++++++.
T Consensus 179 ~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 179 SLLRKEFQYLVAVLS 193 (252)
T ss_dssp HTEEEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEEEe
Confidence 999999999876643
No 10
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.78 E-value=1.4e-17 Score=180.51 Aligned_cols=153 Identities=15% Similarity=0.215 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-----CC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QD 591 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-----~~ 591 (772)
+.||++|+.. ++ .+ +++.+||+||+|+|.+++.+..+.+ .+|++|||||.|+++|++||... ++
T Consensus 173 ~~YhE~l~~~-~~-~~--------p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~d 241 (364)
T 2qfm_A 173 LAYTRAIMGS-GK-ED--------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 241 (364)
T ss_dssp HHHHHHHTTT-TC-CC--------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred hHHHHHHhhh-hh-hC--------CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccc
Confidence 4699977543 22 22 6789999999999999999988866 79999999999999999999521 23
Q ss_pred ---CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcCC
Q 004133 592 ---KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADF 667 (772)
Q Consensus 592 ---~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~-~d~~~g~s~Pp~~f 667 (772)
+|++++++||++|+++... .+.+||+||+|... +. +. .|..+
T Consensus 242 p~~~rv~vi~~Da~~~L~~~~~-----------------------------~~~~fDvII~D~~d~P~---~~--~p~~L 287 (364)
T 2qfm_A 242 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPI---ST--SPEED 287 (364)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCC---CC--C----
T ss_pred cCCCcEEEEECcHHHHHHhhhc-----------------------------cCCCceEEEECCCCccc---Cc--Cchhh
Confidence 3899999999999987520 03679999999865 31 11 24468
Q ss_pred CcHHHHHHH----HHccCCCcEEEEEecCCChhHHHHHHHH-HHHhccceEE
Q 004133 668 VEGSFLLTV----KDALSEQGLFIVNLVSRSQATKDMVISR-MKMVFNHLFC 714 (772)
Q Consensus 668 ~~~~fl~~~----~~~L~~~Gilv~Nl~~~~~~~~~~v~~~-l~~vF~~v~~ 714 (772)
++.+|++.+ +++|+|||++++|..+........++++ ++++|+.|..
T Consensus 288 ~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 288 STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 999999999 9999999999999876654333334554 8899997655
No 11
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.77 E-value=1.2e-17 Score=179.99 Aligned_cols=167 Identities=17% Similarity=0.286 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC----CCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~----~~~ 592 (772)
+.||. |++.+++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|... .++
T Consensus 92 ~~Y~e-~l~~l~l~~~--------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~ 162 (314)
T 2b2c_A 92 FSYQE-MLAHLPMFAH--------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162 (314)
T ss_dssp SHHHH-HHHHHHHHHS--------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCC
Confidence 56876 5666665443 5678999999999999999998878889999999999999999999432 368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
|++++++|+.+++... ..+||+||+|.... . .|+..+++.+|
T Consensus 163 rv~~~~~D~~~~l~~~--------------------------------~~~fD~Ii~d~~~~--~----~~~~~l~t~~~ 204 (314)
T 2b2c_A 163 KLDLFCGDGFEFLKNH--------------------------------KNEFDVIITDSSDP--V----GPAESLFGQSY 204 (314)
T ss_dssp TEEEECSCHHHHHHHC--------------------------------TTCEEEEEECCC-------------------H
T ss_pred CEEEEEChHHHHHHhc--------------------------------CCCceEEEEcCCCC--C----CcchhhhHHHH
Confidence 9999999999998763 25799999987533 1 25667888999
Q ss_pred HHHHHHccCCCcEEEEEecC--CChhHHHHHHHHHHHhccceEEEe--ecC--Cce-EEEEEecC
Q 004133 673 LLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFCLQ--LEE--DVN-LVLFGLSS 730 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N-~vl~a~~~ 730 (772)
++.++++|+|||+++++..+ .+......+.+.++++|+++..+. ++. +++ .+++|++.
T Consensus 205 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 205 YELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 99999999999999998733 244566778999999999765443 333 234 57778766
No 12
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.77 E-value=1.4e-17 Score=178.35 Aligned_cols=169 Identities=19% Similarity=0.242 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC----CCCCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg----~~~~~ 592 (772)
+.||..|. .+++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|. -..++
T Consensus 74 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~ 144 (296)
T 1inl_A 74 FMYHEMLA-HVPMFLH--------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDP 144 (296)
T ss_dssp HHHHHHHH-HHHHHHS--------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHHHh-HHHHhcC--------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCC
Confidence 56887544 4444432 45689999999999999999988777899999999999999999982 12368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
+++++++|+.+++... ..+||+|++|+..+. . .|+..+++.+|
T Consensus 145 ~v~~~~~D~~~~l~~~--------------------------------~~~fD~Ii~d~~~~~-~----~~~~~l~~~~~ 187 (296)
T 1inl_A 145 RAEIVIANGAEYVRKF--------------------------------KNEFDVIIIDSTDPT-A----GQGGHLFTEEF 187 (296)
T ss_dssp TEEEEESCHHHHGGGC--------------------------------SSCEEEEEEEC---------------CCSHHH
T ss_pred ceEEEECcHHHHHhhC--------------------------------CCCceEEEEcCCCcc-c----CchhhhhHHHH
Confidence 9999999999997653 257999999875431 1 25677889999
Q ss_pred HHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ec---CCceEEEEEecCC
Q 004133 673 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSE 731 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~vl~a~~~~ 731 (772)
++.++++|+|||+|+++..+. +......++++++++|+++..+. ++ .+.+.+++|++..
T Consensus 188 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 253 (296)
T 1inl_A 188 YQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFASKGI 253 (296)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEEESSC
T ss_pred HHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEecCCC
Confidence 999999999999999997653 45667888999999999876654 22 3456677888753
No 13
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.76 E-value=2.2e-18 Score=184.22 Aligned_cols=168 Identities=20% Similarity=0.314 Sum_probs=123.8
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-----CCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQD 591 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-----~~~ 591 (772)
+.||..| +.+++..+ +++.+||+||+|+|.++..+.++.+..+|++|||||.|+++|+++|.. -.+
T Consensus 67 ~~Y~e~l-~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~ 137 (294)
T 3adn_A 67 FIYHEMM-THVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHHHH-HHHHHHHS--------TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTC
T ss_pred hHHHHHH-HHHHHhcC--------CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccC
Confidence 6687754 44444443 668899999999999999999987778999999999999999999842 247
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHH
Q 004133 592 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 671 (772)
Q Consensus 592 ~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~ 671 (772)
+|++++++||.+|++.. ..+||+||+|...+. .|+..+++.+
T Consensus 138 ~rv~~~~~D~~~~l~~~--------------------------------~~~fDvIi~D~~~p~------~~~~~l~~~~ 179 (294)
T 3adn_A 138 PRFKLVIDDGVNFVNQT--------------------------------SQTFDVIISDCTDPI------GPGESLFTSA 179 (294)
T ss_dssp TTCCEECSCSCC---CC--------------------------------CCCEEEEEECC----------------CCHH
T ss_pred CceEEEEChHHHHHhhc--------------------------------CCCccEEEECCCCcc------CcchhccHHH
Confidence 89999999999998653 267999999876432 2577899999
Q ss_pred HHHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ecCC--c-eEEEEEecCC
Q 004133 672 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEED--V-NLVLFGLSSE 731 (772)
Q Consensus 672 fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~~--~-N~vl~a~~~~ 731 (772)
|++.++++|+|||+|++|..+. .......++.+++++|+++..+. ++.. + ...++|++..
T Consensus 180 f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEESCT
T ss_pred HHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeCCc
Confidence 9999999999999999998543 33556778999999999866544 3332 2 3456777654
No 14
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.71 E-value=4.9e-16 Score=166.83 Aligned_cols=168 Identities=20% Similarity=0.218 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC----CCCCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg----~~~~~ 592 (772)
..|+..|. .+++..+ +.+.+||+||+|+|.++..+.++.+..+|++||+||.++++|++++. -..++
T Consensus 79 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~ 149 (304)
T 3bwc_A 79 FVYHEVLG-HTSLCSH--------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADP 149 (304)
T ss_dssp HHHHHHHH-HHHHTTS--------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHHHh-hhhhhcC--------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 56776544 4444332 46689999999999999999988777899999999999999999982 12468
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
+++++++|+.+++.... ..+||+|++|..... .|+..+++.+|
T Consensus 150 ~v~~~~~D~~~~~~~~~-------------------------------~~~fDvIi~d~~~~~------~~~~~l~~~~~ 192 (304)
T 3bwc_A 150 RATVRVGDGLAFVRQTP-------------------------------DNTYDVVIIDTTDPA------GPASKLFGEAF 192 (304)
T ss_dssp TEEEEESCHHHHHHSSC-------------------------------TTCEEEEEEECC---------------CCHHH
T ss_pred cEEEEECcHHHHHHhcc-------------------------------CCceeEEEECCCCcc------ccchhhhHHHH
Confidence 99999999999976522 257999999875432 25778889999
Q ss_pred HHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHh-ccceEEEee--c---CCceEEEEEecC
Q 004133 673 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMV-FNHLFCLQL--E---EDVNLVLFGLSS 730 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~v-F~~v~~~~~--~---~~~N~vl~a~~~ 730 (772)
|+.++++|+|||+|+++..+. .......+.+.++++ |+.+..+.. + .+....++|++.
T Consensus 193 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeCC
Confidence 999999999999999997653 345567789999999 997766543 3 344557778876
No 15
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.71 E-value=1.3e-17 Score=168.47 Aligned_cols=107 Identities=18% Similarity=0.310 Sum_probs=92.1
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc-------------CCCCcEEEEeeccCcccccC
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-------------DRSDMRWRVMDMTSMQVFMD 133 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~-------------~~~~v~f~~~D~~~l~~~~~ 133 (772)
.++.+|||+|||+|..+..|++.|+ +|+|+|+|+.||+.|++++.. ...+++|+++|+.+++ +.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~-~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT-ARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST-HHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC-ccc
Confidence 4678999999999999999999987 799999999999999887642 2458999999999998 765
Q ss_pred -CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 134 -ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 134 -~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++||+|++.++++++..++ ..+++++++|+|||||+++++++
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~-----~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADM-----RERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHH-----HHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHH-----HHHHHHHHHHHcCCCcEEEEEEE
Confidence 8999999999999885432 67899999999999999555543
No 16
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.71 E-value=2.5e-16 Score=169.03 Aligned_cols=167 Identities=18% Similarity=0.267 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC----CCCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~----~~~~ 592 (772)
..||. |++.+++..+ +.+.+||+||+|+|.++..+.++.|..+|++||+||.++++|+++|.. ..++
T Consensus 79 ~~y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~ 149 (304)
T 2o07_A 79 FSYQE-MIANLPLCSH--------PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSS 149 (304)
T ss_dssp HHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 55775 5555555432 567899999999999999999887778999999999999999999842 1368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
+++++++|+.+++.... .+||+||+|..... .|+..+.+.+|
T Consensus 150 rv~v~~~Da~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~~~ 191 (304)
T 2o07_A 150 KLTLHVGDGFEFMKQNQ--------------------------------DAFDVIITDSSDPM------GPAESLFKESY 191 (304)
T ss_dssp TEEEEESCHHHHHHTCS--------------------------------SCEEEEEEECC-----------------CHH
T ss_pred cEEEEECcHHHHHhhCC--------------------------------CCceEEEECCCCCC------CcchhhhHHHH
Confidence 99999999999987632 57999999875431 24566788999
Q ss_pred HHHHHHccCCCcEEEEEecC--CChhHHHHHHHHHHHhccceEEE--eecC---CceEEEEEecC
Q 004133 673 LLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFCL--QLEE---DVNLVLFGLSS 730 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~~--~~~~---~~N~vl~a~~~ 730 (772)
|+.++++|+|||+|+++..+ ........+.+.++++|+++... .++. +...+++|++.
T Consensus 192 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 192 YQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp HHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCC
Confidence 99999999999999998744 34556677889999999976443 2333 22346677765
No 17
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.68 E-value=8.1e-16 Score=166.39 Aligned_cols=168 Identities=22% Similarity=0.332 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC----CCCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~----~~~~ 592 (772)
+.||.. +..+++..+ +.+.+||+||+|+|.++..+.++.|..+|++||+||.++++|++++.. ..++
T Consensus 100 ~~y~e~-l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~ 170 (321)
T 2pt6_A 100 FAYHEM-MTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDK 170 (321)
T ss_dssp HHHHHH-HHHHHHHHS--------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGST
T ss_pred hHHHHH-HHHHHHhcC--------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 568764 444554432 456899999999999999999887788999999999999999999853 1368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
+++++++|+.+++.... .+||+|++|...+ . .|+..+++.+|
T Consensus 171 ~v~~~~~D~~~~l~~~~--------------------------------~~fDvIi~d~~~p--~----~~~~~l~~~~~ 212 (321)
T 2pt6_A 171 RVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQNF 212 (321)
T ss_dssp TEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCS--S----SGGGGGSSHHH
T ss_pred cEEEEEccHHHHHhhcC--------------------------------CCceEEEECCcCC--C----CcchhhhHHHH
Confidence 99999999999987632 5799999987432 1 25667888999
Q ss_pred HHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEe--ecC--CceE-EEEEecCC
Q 004133 673 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE--DVNL-VLFGLSSE 731 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N~-vl~a~~~~ 731 (772)
++.+++.|+|||+++++..+. +......++++++++|+++..+. ++. ++++ .++|++..
T Consensus 213 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~as~~~ 278 (321)
T 2pt6_A 213 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTD 278 (321)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEeeCCC
Confidence 999999999999999997654 45567788999999999865554 332 2344 56777653
No 18
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.68 E-value=3.6e-16 Score=164.31 Aligned_cols=155 Identities=12% Similarity=0.026 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC----CCCC
Q 004133 517 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 592 (772)
Q Consensus 517 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~----~~~~ 592 (772)
+.||..|. .+++..+ +.+.+||+||+|+|.++..+..+ + .+|++||+||.|+++|+++|.. ..++
T Consensus 56 ~~y~e~l~-~~~~~~~--------~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~ 124 (262)
T 2cmg_A 56 HIESELLA-HMGGCTK--------KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNK 124 (262)
T ss_dssp HHHHHHHH-HHHHTTS--------SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCT
T ss_pred HHHHHHHH-HHhhhcC--------CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 56876544 4444332 46789999999999999988888 7 8999999999999999999843 1468
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHH
Q 004133 593 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 672 (772)
Q Consensus 593 rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~f 672 (772)
|++++++||.+|+ .+||+||+|+. | | ..|
T Consensus 125 rv~~~~~D~~~~~------------------------------------~~fD~Ii~d~~--d-------p------~~~ 153 (262)
T 2cmg_A 125 NFTHAKQLLDLDI------------------------------------KKYDLIFCLQE--P-------D------IHR 153 (262)
T ss_dssp TEEEESSGGGSCC------------------------------------CCEEEEEESSC--C-------C------HHH
T ss_pred eEEEEechHHHHH------------------------------------hhCCEEEECCC--C-------h------HHH
Confidence 9999999998874 24999999842 2 1 239
Q ss_pred HHHHHHccCCCcEEEEEecCC--ChhHHHHHHHHHHHhccceEEEee--c-CCceEEEEEecCCCc
Q 004133 673 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQL--E-EDVNLVLFGLSSESC 733 (772)
Q Consensus 673 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~~--~-~~~N~vl~a~~~~~~ 733 (772)
++.+++.|+|||+++++..+. +......+.++++++|+++..+.. + .+.+.+++|++...+
T Consensus 154 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~~p 219 (262)
T 2cmg_A 154 IDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKTHP 219 (262)
T ss_dssp HHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSCCT
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCCCc
Confidence 999999999999999986543 334567788999999998766542 2 455667788876433
No 19
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=2.4e-15 Score=149.48 Aligned_cols=133 Identities=20% Similarity=0.339 Sum_probs=107.9
Q ss_pred CCCCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHH
Q 004133 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (772)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~ 103 (772)
.|...+||+..|.... .. ..+...+.. .++.+|||+|||+|.++..+++.|. +|+++|+|+.+
T Consensus 4 ~~~~~~~~~~~~~~~~---~~----------~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~ 66 (199)
T 2xvm_A 4 VIRDENYFTDKYELTR---TH----------SEVLEAVKV---VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMS 66 (199)
T ss_dssp CCCCTTHHHHHHTCCC---CC----------HHHHHHTTT---SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHH
T ss_pred EEechHHHhhhhcccc---cc----------HHHHHHhhc---cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHH
Confidence 3567789999886541 11 124455544 4678999999999999999999876 79999999999
Q ss_pred HHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 104 ISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 104 I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++.++++..... .++++.++|+.+++ + +++||+|++..+++++...+ ...+++++.++|||||++++++.
T Consensus 67 ~~~a~~~~~~~~~~~~~~~~~d~~~~~-~-~~~~D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 67 IANVERIKSIENLDNLHTRVVDLNNLT-F-DRQYDFILSTVVLMFLEAKT-----IPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHHHHHHHTCTTEEEEECCGGGCC-C-CCCEEEEEEESCGGGSCGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCcEEEEcchhhCC-C-CCCceEEEEcchhhhCCHHH-----HHHHHHHHHHhcCCCeEEEEEEe
Confidence 999988765433 37999999999998 6 88999999999999986433 68999999999999999887654
No 20
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.64 E-value=3.6e-15 Score=162.04 Aligned_cols=168 Identities=21% Similarity=0.366 Sum_probs=127.8
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc-----CCCC
Q 004133 516 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQ 590 (772)
Q Consensus 516 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----g~~~ 590 (772)
.+.||. |+..+++..+ +.+.+||+||+|+|.++..|..+.|..+|++||+||.++++|+++| |+ .
T Consensus 103 e~~y~e-~L~~l~l~~~--------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~ 172 (334)
T 1xj5_A 103 ECAYQE-MITHLPLCSI--------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-E 172 (334)
T ss_dssp HHHHHH-HHHHHHHTTS--------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-G
T ss_pred chHHHH-HHHHHHHhhC--------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-C
Confidence 466877 4555555432 5678999999999999999999877789999999999999999998 33 4
Q ss_pred CCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH
Q 004133 591 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 670 (772)
Q Consensus 591 ~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~ 670 (772)
+++++++++|+.+++.... ..+||+|++|...+ . .++..++..
T Consensus 173 ~~rv~~~~~D~~~~l~~~~-------------------------------~~~fDlIi~d~~~p--~----~~~~~l~~~ 215 (334)
T 1xj5_A 173 DPRVNLVIGDGVAFLKNAA-------------------------------EGSYDAVIVDSSDP--I----GPAKELFEK 215 (334)
T ss_dssp STTEEEEESCHHHHHHTSC-------------------------------TTCEEEEEECCCCT--T----SGGGGGGSH
T ss_pred CCcEEEEECCHHHHHHhcc-------------------------------CCCccEEEECCCCc--c----CcchhhhHH
Confidence 6799999999999987643 25799999987533 1 145567789
Q ss_pred HHHHHHHHccCCCcEEEEEecC--CChhHHHHHHHHHHHhccceEE---EeecCC---ceEEEEEecC
Q 004133 671 SFLLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFC---LQLEED---VNLVLFGLSS 730 (772)
Q Consensus 671 ~fl~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~---~~~~~~---~N~vl~a~~~ 730 (772)
+||+.++++|+|||+|+++.-+ ........++++++++|+.+.. ..++.- ....++|++.
T Consensus 216 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~ 283 (334)
T 1xj5_A 216 PFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTE 283 (334)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECS
T ss_pred HHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccC
Confidence 9999999999999999997433 3444556778999999995332 233332 3456777764
No 21
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.63 E-value=6.2e-13 Score=157.90 Aligned_cols=113 Identities=17% Similarity=0.187 Sum_probs=84.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
..+||.+|+|+|.++..+.... ..+|++||+++.+++.|++.+ |+ .+++++++.+|+.+++....
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl-~~~~v~~i~~D~~~~l~~~~---------- 607 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREAN---------- 607 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC-CSTTEEEEESCHHHHHHHCC----------
T ss_pred CCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CccceEEEecCHHHHHHhcC----------
Confidence 4689999999999998887743 347999999999999999987 44 23589999999999987742
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-----CcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.+||+|++|.-.-..+.. .... .-.+++..+.+.|+|||+|++-...+
T Consensus 608 ----------------------~~fD~Ii~DPP~f~~~~~----~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 608 ----------------------EQFDLIFIDPPTFSNSKR----MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp ----------------------CCEEEEEECCCSBC-----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ----------------------CCccEEEECCccccCCcc----chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 679999997532110000 0011 13567889999999999999766543
No 22
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=1.6e-15 Score=155.67 Aligned_cols=141 Identities=18% Similarity=0.276 Sum_probs=108.5
Q ss_pred CHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHH
Q 004133 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (772)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~ 106 (772)
..+||+++|.... ..|... .....+..++.... .++.+|||+|||+|.++..++..|. +|+|+|+|+.+++.
T Consensus 32 ~~~~w~~~~~~~~----~~~~~~--~~~~~l~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~ 103 (235)
T 3lcc_A 32 EEGGWEKCWEEEI----TPWDQG--RATPLIVHLVDTSS-LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAK 103 (235)
T ss_dssp HHHHHHHHHHTTC----CTTCCS--SCCHHHHHHHHTTC-SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHH
T ss_pred CHHHHHHHHhcCC----CCcccC--CCCHHHHHHHHhcC-CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 4679999998753 124422 11222333332211 2456999999999999999988766 69999999999999
Q ss_pred HHHHhccC--CCCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 107 MLRRNVRD--RSDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 107 a~~~~~~~--~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++++.... ..+++|.++|+.+++ ++++||+|++..+++++...+ ...+++++.++|||||++++..+..
T Consensus 104 a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 104 ANETYGSSPKAEYFSFVKEDVFTWR--PTELFDLIFDYVFFCAIEPEM-----RPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp HHHHHTTSGGGGGEEEECCCTTTCC--CSSCEEEEEEESSTTTSCGGG-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHhhccCCCcceEEEECchhcCC--CCCCeeEEEEChhhhcCCHHH-----HHHHHHHHHHHCCCCcEEEEEEecc
Confidence 98887542 246999999999987 567999999999999986433 6899999999999999999988754
No 23
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.61 E-value=2.5e-15 Score=153.25 Aligned_cols=139 Identities=21% Similarity=0.373 Sum_probs=101.6
Q ss_pred CHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHH
Q 004133 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (772)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~ 106 (772)
..+||+.+|.... .....++. .+..++. ++.+|||+|||+|.++..++..|. +|+|+|+|+.+++.
T Consensus 2 ~~~yw~~~~~~~~-~~~~~~~~-------~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~ 67 (235)
T 3sm3_A 2 PESYWEKVSGKNI-PSSLDLYP-------IIHNYLQ-----EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRL 67 (235)
T ss_dssp -----------------CCCCT-------THHHHCC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred chhHHHHHhhccC-CCHHHHHH-------HHHHhCC-----CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 3579999887542 22222222 2555553 578999999999999999999976 79999999999999
Q ss_pred HHHHhccCCC------CcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 107 MLRRNVRDRS------DMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 107 a~~~~~~~~~------~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++++...... ++++.++|+.+++ +++++||+|++..+++++.+++ ....+++++.++|||||++++.++
T Consensus 68 a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 68 AETAARSPGLNQKTGGKAEFKVENASSLS-FHDSSFDFAVMQAFLTSVPDPK----ERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp HHHHTTCCSCCSSSSCEEEEEECCTTSCC-SCTTCEEEEEEESCGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCccccCcceEEEEecccccC-CCCCceeEEEEcchhhcCCCHH----HHHHHHHHHHHHcCCCeEEEEEEC
Confidence 9887754433 5799999999998 8899999999999999987632 155899999999999999999988
Q ss_pred Cchh
Q 004133 181 AESH 184 (772)
Q Consensus 181 ~~~~ 184 (772)
....
T Consensus 143 ~~~~ 146 (235)
T 3sm3_A 143 GQNW 146 (235)
T ss_dssp BCCT
T ss_pred Ccch
Confidence 7543
No 24
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=1.9e-15 Score=155.95 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=94.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~-~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++.... ..++++.++|+.+++ +++++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-PEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-CCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-CCCCCEEEEEEcchhh
Confidence 57899999999999999998887668999999999999998887543 346899999999998 7888999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++.++. ...+++++.++|||||++++.+..
T Consensus 158 ~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 158 HLTDQH-----LAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hCCHHH-----HHHHHHHHHHhcCCCeEEEEEEcc
Confidence 986533 568999999999999999997754
No 25
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.61 E-value=2.8e-15 Score=151.65 Aligned_cols=142 Identities=18% Similarity=0.254 Sum_probs=111.9
Q ss_pred CHHHHHHHHHhcCCCCccc----cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHH
Q 004133 27 SKENWDKFFTIRGIGDSFE----WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKV 102 (772)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~e----W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~ 102 (772)
+.++|++.|... +.+. |+.. ..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.
T Consensus 13 ~~~~~~~~~~~~---~~w~~~~~~~~~-~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~ 84 (216)
T 3ofk_A 13 TYQSLERELAND---DPWRLDDNPFER-ERHTQLLRLSLSS---GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPR 84 (216)
T ss_dssp HHHHHHHHHTSS---SGGGTTTCHHHH-HHHHHHHHHHTTT---SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHH
T ss_pred hHHHHHHHhcCC---CCcccccCHhHH-HHHHHHHHHHccc---CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHH
Confidence 578999999765 2222 2221 1233444445544 5678999999999999999999875 7999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 103 VISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 103 ~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++.++++... .+++++.++|+.+++ ++++||+|++..+++++.+++ ....+++++.++|||||++++.+...
T Consensus 85 ~~~~a~~~~~~-~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 85 AIGRACQRTKR-WSHISWAATDILQFS--TAELFDLIVVAEVLYYLEDMT----QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHTTT-CSSEEEEECCTTTCC--CSCCEEEEEEESCGGGSSSHH----HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHhccc-CCCeEEEEcchhhCC--CCCCccEEEEccHHHhCCCHH----HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999887743 458999999999987 678999999999999997632 25788999999999999999987654
Q ss_pred h
Q 004133 183 S 183 (772)
Q Consensus 183 ~ 183 (772)
.
T Consensus 158 ~ 158 (216)
T 3ofk_A 158 A 158 (216)
T ss_dssp H
T ss_pred C
Confidence 3
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=2.1e-15 Score=157.99 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=97.0
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...|..+.. .+.+|||+|||+|.++..|++.+. +|+|+|+|+.|++.|+ ..++++|.++|+.+++
T Consensus 27 ~~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~-----~~~~v~~~~~~~e~~~- 94 (257)
T 4hg2_A 27 RALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQAL-----RHPRVTYAVAPAEDTG- 94 (257)
T ss_dssp HHHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCC-----CCTTEEEEECCTTCCC-
T ss_pred HHHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhh-----hcCCceeehhhhhhhc-
Confidence 355566666653 357999999999999999999875 7999999999997663 3468999999999999
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++++||+|++..++|++. ..+++++++|+|||||+|++..+....
T Consensus 95 ~~~~sfD~v~~~~~~h~~~--------~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFD--------LDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp CCSSCEEEEEECSCCTTCC--------HHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred ccCCcccEEEEeeehhHhh--------HHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 9999999999999998873 357999999999999999999887543
No 27
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.59 E-value=4.5e-15 Score=155.91 Aligned_cols=107 Identities=18% Similarity=0.152 Sum_probs=91.1
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC---CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEe
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG---FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILD 141 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g---~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~ 141 (772)
.++.+|||+|||+|.++..|++.. ..+|+|+|+|+.||+.|+++....+ .+++|+++|+.+++ + +.||+|++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-~--~~~d~v~~ 145 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-I--ENASMVVL 145 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-C--CSEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-c--ccccccee
Confidence 478999999999999999998861 1369999999999999998875433 47999999999987 5 46999999
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
..+++++..++ ...+|++++|+|||||+|++.+..
T Consensus 146 ~~~l~~~~~~~-----~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 146 NFTLQFLEPSE-----RQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeeeecCchh-----HhHHHHHHHHHcCCCcEEEEEecc
Confidence 99999986543 678999999999999999987644
No 28
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.58 E-value=1.3e-14 Score=150.62 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=95.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++.. ..++++.++|+.+++ +++++||+|++..+++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 119 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIA-IEPDAYNVVLSSLALH 119 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCC-CCTTCEEEEEEESCGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCC-CCCCCeEEEEEchhhh
Confidence 5788999999999999999999987689999999999999988764 568999999999998 8899999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++.+ ...+++++.++|||||++++....
T Consensus 120 ~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 120 YIAS-------FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp GCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhh-------HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9854 579999999999999999988655
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=1.3e-14 Score=145.98 Aligned_cols=135 Identities=21% Similarity=0.245 Sum_probs=108.1
Q ss_pred HHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHH
Q 004133 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (772)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a 107 (772)
.++|+..+... |...+..+...+...+.. .++ +|||+|||+|.++..+++.+..+|+|+|+|+.+++.+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a 82 (219)
T 3dlc_A 14 AKNMDEISKTL-------FAPIYPIIAENIINRFGI---TAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIA 82 (219)
T ss_dssp HHHHHHHHHTT-------TTTHHHHHHHHHHHHHCC---CEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHH
T ss_pred hhhHHHHHHHh-------hccccHHHHHHHHHhcCC---CCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 45676666543 122244556666666654 344 9999999999999999987334799999999999999
Q ss_pred HHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 108 LRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 108 ~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++..... .++++.++|+.+++ +++++||+|++..+++++.+ ...+++++.++|||||++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 83 LKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVFFWED-------VATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp HHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHhhccC-------HHHHHHHHHHhCCCCCEEEEEecc
Confidence 88875543 37999999999999 89999999999999999854 578999999999999999987643
No 30
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.58 E-value=8.6e-15 Score=150.42 Aligned_cols=117 Identities=26% Similarity=0.386 Sum_probs=101.2
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+..++. ++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++. ...+++++++|+.+++
T Consensus 41 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~- 111 (242)
T 3l8d_A 41 STIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLP- 111 (242)
T ss_dssp TTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCS-
T ss_pred HHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCC-
Confidence 355566666663 578999999999999999999976 7999999999999997764 3468999999999998
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++++||+|++.++++++.+ ...++++++++|+|||++++.++...
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEE-------PLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSC-------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCCccEEEEcChHhhccC-------HHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 88999999999999999855 56899999999999999999886543
No 31
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.58 E-value=1.9e-15 Score=158.52 Aligned_cols=147 Identities=14% Similarity=0.174 Sum_probs=106.0
Q ss_pred CCCCHHHHHHHHHhcCCCC----ccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeC
Q 004133 24 DFTSKENWDKFFTIRGIGD----SFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF 99 (772)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~----~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDi 99 (772)
.|....||+.+|....... ..+| +...+.+++.. ...++.+|||+|||+|.++..++..|+.+|+|+|+
T Consensus 14 ~~~~~~~~~~~y~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~ 86 (263)
T 2a14_A 14 HFLPRDYLATYYSFDGSPSPEAEMLKF------NLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDF 86 (263)
T ss_dssp HCCHHHHHHHHCCCCCSCCHHHHHHHH------HHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEES
T ss_pred ccCHHHHHHHhcCCCcccchhhHHHHH------HHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccc
Confidence 3667889999997652111 1223 22334444422 12467899999999999988887778778999999
Q ss_pred CHHHHHHHHHHhccCCC------------------------------CcE-EEEeeccCcccc---cCCCccEEEecccc
Q 004133 100 SKVVISDMLRRNVRDRS------------------------------DMR-WRVMDMTSMQVF---MDETFDVILDKGGL 145 (772)
Q Consensus 100 S~~~I~~a~~~~~~~~~------------------------------~v~-f~~~D~~~l~~~---~~~sfDvVi~~~~l 145 (772)
|+.||+.+++++..... ++. +.++|+.+...+ ..++||+|++..+|
T Consensus 87 s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l 166 (263)
T 2a14_A 87 TDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAM 166 (263)
T ss_dssp CHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred cHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHH
Confidence 99999999876533211 133 899999984213 25799999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+++... ......++++++++|||||+|++...
T Consensus 167 ~~i~~~---~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 167 ECACCS---LDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHCSS---HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHhcCC---HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 987432 11267899999999999999999864
No 32
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=1.5e-14 Score=149.32 Aligned_cols=147 Identities=14% Similarity=0.178 Sum_probs=108.9
Q ss_pred CHHHHHHHHHhcC-CCCccccccc-hhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHH
Q 004133 27 SKENWDKFFTIRG-IGDSFEWYAE-WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (772)
Q Consensus 27 ~~~yWd~~y~~~~-~~~~~eW~~~-~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I 104 (772)
..++|+++|.... .....-|... .......+..++.. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.|+
T Consensus 15 ~~~~w~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~ 91 (245)
T 3ggd_A 15 VADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSAL 91 (245)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTCCCGGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHH
T ss_pred hHHHHHHHHHhcccCCccceecchhHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHH
Confidence 4667777776531 0111223222 22333444444432 24678999999999999999999877 799999999999
Q ss_pred HHHHHHhccCCCCcEEEEeeccCcccccC-----CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 105 SDMLRRNVRDRSDMRWRVMDMTSMQVFMD-----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 105 ~~a~~~~~~~~~~v~f~~~D~~~l~~~~~-----~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+.+++++ ...+++|+++|+.+++ +.. ..||+|++..+++++...+ ...+++++.++|||||++++.+
T Consensus 92 ~~a~~~~--~~~~~~~~~~d~~~~~-~~~~~~~~~~~d~v~~~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 92 EIAAKEN--TAANISYRLLDGLVPE-QAAQIHSEIGDANIYMRTGFHHIPVEK-----RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp HHHHHHS--CCTTEEEEECCTTCHH-HHHHHHHHHCSCEEEEESSSTTSCGGG-----HHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHhC--cccCceEEECcccccc-cccccccccCccEEEEcchhhcCCHHH-----HHHHHHHHHHHcCCCCEEEEEe
Confidence 9998877 3348999999999976 332 3499999999999986433 6899999999999999999998
Q ss_pred cCchh
Q 004133 180 LAESH 184 (772)
Q Consensus 180 ~~~~~ 184 (772)
+..+.
T Consensus 164 ~~~~~ 168 (245)
T 3ggd_A 164 LGTGC 168 (245)
T ss_dssp ECTTH
T ss_pred CCccc
Confidence 77543
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.57 E-value=4e-15 Score=154.04 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++.... .++++.++|+.+++ +++++||+|++..+++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETAT-LPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCC-CCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCC-CCCCCeEEEEEcchhh
Confidence 568899999999999999999887667999999999999998887443 67999999999998 8889999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++.+.+ ...+++++.++|||||++++.+.
T Consensus 170 ~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 170 YLTDAD-----FVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHH-----HHHHHHHHHHhcCCCeEEEEEec
Confidence 985422 67999999999999999999874
No 34
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=2.5e-14 Score=152.15 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=95.7
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .++++.++|+.+++ +++++||+|++.+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~ 158 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIWSQD 158 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEEecc
Confidence 57889999999999999999987 65 79999999999999988764433 47999999999999 8999999999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++++.+ ...+++++.++|||||++++.+....
T Consensus 159 ~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 159 AFLHSPD-------KLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp CGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred hhhhcCC-------HHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 9999866 57999999999999999999876543
No 35
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.57 E-value=1.4e-14 Score=146.70 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=92.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.++++.. .++++.++|+.+++ ++ ++||+|++..+++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~-~~-~~fD~v~~~~~l~ 117 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFE-VP-TSIDTIVSTYAFH 117 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCC-CC-SCCSEEEEESCGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcC-CC-CCeEEEEECcchh
Confidence 3678999999999999999999876 79999999999999988763 57999999999998 77 9999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++.+++ ...+++++.++|||||++++.+..
T Consensus 118 ~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 118 HLTDDE-----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp GSCHHH-----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred cCChHH-----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 997643 345999999999999999998743
No 36
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1.1e-14 Score=145.68 Aligned_cols=116 Identities=15% Similarity=0.135 Sum_probs=99.6
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccccc
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFM 132 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~ 132 (772)
....+..++.. .+.+|||+|||+|.++..++..|. +|+|+|+|+.|++.++++. ++++++++|+.+++ ++
T Consensus 30 ~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~-~~ 99 (203)
T 3h2b_A 30 DRVLIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH----PSVTFHHGTITDLS-DS 99 (203)
T ss_dssp THHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC----TTSEEECCCGGGGG-GS
T ss_pred HHHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC----CCCeEEeCcccccc-cC
Confidence 34455666643 378999999999999999999977 6999999999999997763 47999999999998 88
Q ss_pred CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 133 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 133 ~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++||+|++..+++++...+ ...+++++.++|||||++++..+...
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGPGE-----LPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp CCCEEEEEEESSSTTCCTTT-----HHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred CCCeEEEEehhhHhcCCHHH-----HHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 99999999999999986433 68999999999999999999886644
No 37
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.5e-14 Score=154.25 Aligned_cols=119 Identities=12% Similarity=0.202 Sum_probs=101.7
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHH--cCCCeEEEEeCCHHHHHHHHHHhccC---CCCcEEEEeecc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYD--AGFHGITNVDFSKVVISDMLRRNVRD---RSDMRWRVMDMT 126 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~--~g~~~V~gvDiS~~~I~~a~~~~~~~---~~~v~f~~~D~~ 126 (772)
.+...+..+.. .++.+|||+|||+|.++..+++ .+..+|+|+|+|+.+++.++++.... ..+++|+++|+.
T Consensus 24 ~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 24 DFYKMIDEYHD----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHCC----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHhc----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 55556666654 3689999999999999999996 34568999999999999998887654 568999999999
Q ss_pred CcccccC------CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 127 SMQVFMD------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 127 ~l~~~~~------~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++ +++ ++||+|++..+++++ + ...+++++.++|||||++++.++..+
T Consensus 100 ~~~-~~~~~~~~~~~fD~V~~~~~l~~~-~-------~~~~l~~~~~~LkpgG~l~i~~~~~~ 153 (299)
T 3g5t_A 100 DFK-FLGADSVDKQKIDMITAVECAHWF-D-------FEKFQRSAYANLRKDGTIAIWGYADP 153 (299)
T ss_dssp CCG-GGCTTTTTSSCEEEEEEESCGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEEE
T ss_pred hCC-ccccccccCCCeeEEeHhhHHHHh-C-------HHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 998 777 899999999999999 4 57999999999999999999766543
No 38
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.56 E-value=7.2e-15 Score=152.90 Aligned_cols=118 Identities=14% Similarity=0.245 Sum_probs=99.6
Q ss_pred HHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCc
Q 004133 58 ISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETF 136 (772)
Q Consensus 58 ~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sf 136 (772)
..++......++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++.... +++++.++|+.+++ +++++|
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~-~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKE-FPENNF 121 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCC-CCTTCE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCC-CCCCcE
Confidence 33333333367889999999999999999987 65 7999999999999998877544 78999999999998 889999
Q ss_pred cEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 137 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 137 DvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
|+|++..+++++..++ ...+++++.++|||||++++.++..+
T Consensus 122 D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 122 DLIYSRDAILALSLEN-----KNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp EEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred EEEeHHHHHHhcChHH-----HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9999999999984322 68999999999999999999886543
No 39
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.56 E-value=5.8e-15 Score=147.71 Aligned_cols=136 Identities=20% Similarity=0.253 Sum_probs=103.0
Q ss_pred HHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHH
Q 004133 30 NWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR 109 (772)
Q Consensus 30 yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~ 109 (772)
||+++|.... ..|..........+...+ .++ +|||+|||+|.++..+++.|. +|+++|+|+.+++.+++
T Consensus 1 ~W~~~y~~~~----~~~~~~~~~~l~~~~~~~-----~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~ 69 (202)
T 2kw5_A 1 MWDERFSQSE----YVYGTEPNDFLVSVANQI-----PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQ 69 (202)
T ss_dssp CCCCCCCCCC----CCCCCCCCSSHHHHHHHS-----CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHH
T ss_pred Chhhhhcccc----hhhccCchHHHHHHHHhC-----CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHH
Confidence 5777776442 223333223232333333 245 999999999999999999876 79999999999999988
Q ss_pred HhccCCCCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 110 RNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 110 ~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+......++.+.++|+.+++ +++++||+|++.. .++.. .....+++++.++|||||++++.++....
T Consensus 70 ~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~--~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 70 LAQEKGVKITTVQSNLADFD-IVADAWEGIVSIF--CHLPS-----SLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEEC--CCCCH-----HHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHhcCCceEEEEcChhhcC-CCcCCccEEEEEh--hcCCH-----HHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 87655568999999999998 8889999999843 33321 12689999999999999999999877544
No 40
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.56 E-value=1.1e-14 Score=149.65 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=92.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... +++++++|+.++. ++++||+|++.+++++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQ--LPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCC--CSSCEEEEEEESCGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcC--cCCcccEEEEhhHHHh
Confidence 567999999999999999998876 699999999999999887643 7999999999874 6789999999999999
Q ss_pred cccCccchHHHHHHHHHHH-hccccCeEEEEEEcCchh
Q 004133 148 LMEPELGHKLGNQYLSEVK-RLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~-rvLkpGG~~ii~~~~~~~ 184 (772)
+.+ ...+++++. ++|||||++++.+.....
T Consensus 116 ~~~-------~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 116 IDD-------PVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp CSS-------HHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred hcC-------HHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 965 468999999 999999999998866543
No 41
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.55 E-value=2.2e-14 Score=149.59 Aligned_cols=113 Identities=15% Similarity=0.237 Sum_probs=97.2
Q ss_pred HHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCC
Q 004133 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDET 135 (772)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~s 135 (772)
+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++..... ++++|.++|+.+++ +++++
T Consensus 29 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~ 103 (260)
T 1vl5_A 29 LMQIAAL---KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDER 103 (260)
T ss_dssp HHHHHTC---CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTC
T ss_pred HHHHhCC---CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCC
Confidence 4445544 5788999999999999999998865 79999999999999988775443 47999999999999 89999
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
||+|++..+++++.+ ...+|+++.++|||||++++.+..
T Consensus 104 fD~V~~~~~l~~~~d-------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 104 FHIVTCRIAAHHFPN-------PASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEEhhhhHhcCC-------HHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999999999999965 468999999999999999997654
No 42
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.55 E-value=3.5e-14 Score=148.66 Aligned_cols=119 Identities=21% Similarity=0.262 Sum_probs=100.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ 129 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~ 129 (772)
.....+...+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+ +++++.++|+.+++
T Consensus 32 ~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 32 EVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp HHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 344444455441 25788999999999999999999866689999999999999988875544 46999999999998
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++||+|++.++++++ + ...+++++.++|||||++++.+..
T Consensus 110 -~~~~~fD~i~~~~~~~~~-~-------~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 110 -FRNEELDLIWSEGAIYNI-G-------FERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp -CCTTCEEEEEESSCGGGT-C-------HHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred -CCCCCEEEEEEcCCceec-C-------HHHHHHHHHHHcCCCCEEEEEEee
Confidence 889999999999999998 3 468999999999999999998753
No 43
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.55 E-value=3.7e-14 Score=147.16 Aligned_cols=118 Identities=20% Similarity=0.262 Sum_probs=98.9
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ 129 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~ 129 (772)
.....+...+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+. +++++++|+.+++
T Consensus 32 ~~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 32 EATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp HHHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 444444455432 246789999999999999999998655899999999999999888755442 4999999999999
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+++++||+|++.++++++ + ...+++++.++|||||++++.+.
T Consensus 110 -~~~~~fD~v~~~~~l~~~-~-------~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 110 -FQNEELDLIWSEGAIYNI-G-------FERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp -SCTTCEEEEEEESCSCCC-C-------HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CCCCCEEEEEecChHhhc-C-------HHHHHHHHHHHcCCCcEEEEEEe
Confidence 889999999999999998 3 46899999999999999999874
No 44
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.55 E-value=1.1e-13 Score=140.30 Aligned_cols=163 Identities=15% Similarity=0.114 Sum_probs=117.8
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCC------CCcEEEEeec
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDM 125 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~------~~v~f~~~D~ 125 (772)
....+..++.. .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.++++..... .++++.++|+
T Consensus 17 ~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 17 RLGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred HHHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 33445555543 4678999999999999999998753 589999999999999988864332 2799999999
Q ss_pred cCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh--------------------
Q 004133 126 TSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV-------------------- 185 (772)
Q Consensus 126 ~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~-------------------- 185 (772)
..++ +++++||+|++..+++++.+++ ...+++++.++|||||+++.........
T Consensus 94 ~~~~-~~~~~fD~V~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (219)
T 3jwg_A 94 VYRD-KRFSGYDAATVIEVIEHLDENR-----LQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWT 167 (219)
T ss_dssp SSCC-GGGTTCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBC
T ss_pred cccc-cccCCCCEEEEHHHHHhCCHHH-----HHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeec
Confidence 8888 7789999999999999996533 5799999999999999776655432200
Q ss_pred hhccc----ccc-cCCcEEEEEEcCCCCCCCCCcceEEEEEEecC
Q 004133 186 LGLLF----PKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 225 (772)
Q Consensus 186 ~~~l~----~~~-~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~ 225 (772)
..++. ... ..+|.+....+..... .-..+.-+-+++|..
T Consensus 168 ~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~-~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 168 RKEFQTWAVKVAEKYGYSVRFLQIGEIDD-EFGSPTQMGVFTLGA 211 (219)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEESCCCT-TSCCSEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHCCcEEEEEecCCccc-cCCCCeEEEEEeccC
Confidence 00111 111 2367777777654332 345666677777753
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.54 E-value=3e-14 Score=148.77 Aligned_cols=136 Identities=17% Similarity=0.141 Sum_probs=105.7
Q ss_pred HHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHH
Q 004133 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (772)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a 107 (772)
.++|+..+.... ..|......+...+...+ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+
T Consensus 19 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a 88 (263)
T 3pfg_A 19 AELYDLVHQGKG----KDYHREAADLAALVRRHS-----PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIA 88 (263)
T ss_dssp HHHHHHHHHHTT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhcCC----CCHHHHHHHHHHHHHhhC-----CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHH
Confidence 467877776431 113222233444444444 2468999999999999999999876 799999999999999
Q ss_pred HHHhccCCCCcEEEEeeccCcccccCCCccEEEecc-cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 108 LRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 108 ~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++. ++++++++|+.+++ + +++||+|++.. +++++.++++ ...+++++.++|||||++++..+..+
T Consensus 89 ~~~~----~~~~~~~~d~~~~~-~-~~~fD~v~~~~~~l~~~~~~~~----~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 89 RRRN----PDAVLHHGDMRDFS-L-GRRFSAVTCMFSSIGHLAGQAE----LDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp HHHC----TTSEEEECCTTTCC-C-SCCEEEEEECTTGGGGSCHHHH----HHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HhhC----CCCEEEECChHHCC-c-cCCcCEEEEcCchhhhcCCHHH----HHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 8775 37999999999998 5 78999999998 9999864322 67899999999999999999765433
No 46
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.54 E-value=3.8e-14 Score=150.27 Aligned_cols=159 Identities=16% Similarity=0.224 Sum_probs=116.8
Q ss_pred chhcccccCCCCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEE
Q 004133 16 TDLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGIT 95 (772)
Q Consensus 16 ~~lP~~~~~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~ 95 (772)
..+|..+.+-...++|+.++... ...+..+...+...+.. .++.+|||+|||+|.++..+++.|. +|+
T Consensus 16 ~~~~~~y~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~ 83 (293)
T 3thr_A 16 EGIPDQYADGEAARVWQLYIGDT--------RSRTAEYKAWLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEEGF-SVT 83 (293)
T ss_dssp TTSCCTTTTCHHHHHHHHHHTCC--------SCBCHHHHHHHHHHHHH---TTCCEEEETTCTTSHHHHHHHHTTC-EEE
T ss_pred ccChhhhcCchHHHHHHHHHhcC--------cchHHHHHHHHHHHhcc---cCCCEEEEecCCCCHHHHHHHHCCC-eEE
Confidence 33554443333455888877433 22234555666666654 4678999999999999999999987 799
Q ss_pred EEeCCHHHHHHHHHHhccCC-----CCcEEEEeeccCccc--ccCCCccEEEec-ccccccccCccchHHHHHHHHHHHh
Q 004133 96 NVDFSKVVISDMLRRNVRDR-----SDMRWRVMDMTSMQV--FMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKR 167 (772)
Q Consensus 96 gvDiS~~~I~~a~~~~~~~~-----~~v~f~~~D~~~l~~--~~~~sfDvVi~~-~~l~~l~~~~~~~~~~~~~l~ei~r 167 (772)
|+|+|+.|++.++++..... .++.+.++|+.+++. +++++||+|++. .+++++.+.........++++++++
T Consensus 84 gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~ 163 (293)
T 3thr_A 84 SVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIAS 163 (293)
T ss_dssp EEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHH
Confidence 99999999999987653222 368899999987641 367899999998 7999987621112236899999999
Q ss_pred ccccCeEEEEEEcCchhhh
Q 004133 168 LLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 168 vLkpGG~~ii~~~~~~~~~ 186 (772)
+|||||++++.......+.
T Consensus 164 ~LkpgG~l~~~~~~~~~~~ 182 (293)
T 3thr_A 164 MVRPGGLLVIDHRNYDYIL 182 (293)
T ss_dssp TEEEEEEEEEEEECHHHHH
T ss_pred HcCCCeEEEEEeCCHHHHh
Confidence 9999999999887655544
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=8e-14 Score=137.45 Aligned_cols=105 Identities=25% Similarity=0.388 Sum_probs=90.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEec-ccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDK-GGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~-~~l 145 (772)
.++.+|||+|||+|.++..++..+. +++++|+|+.+++.++++. +++++.++|+.+++ +++++||+|++. .++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~-~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQ-ISETDFDLIVSAGNVM 118 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSC-CCCCCEEEEEECCCCG
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCC-CCCCceeEEEECCcHH
Confidence 3678999999999999999999875 7999999999999997765 36899999999988 788999999998 567
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++..+. ...+++++.++|+|||++++.....
T Consensus 119 ~~~~~~~-----~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 119 GFLAEDG-----REPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred hhcChHH-----HHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 7664322 6789999999999999999876554
No 48
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=6.5e-14 Score=143.34 Aligned_cols=123 Identities=20% Similarity=0.291 Sum_probs=100.9
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~ 129 (772)
......+..++.. ..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++..... +++++++|+.+++
T Consensus 29 ~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 29 DDFYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYD 105 (234)
T ss_dssp HHHHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCC
T ss_pred HHHHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccC
Confidence 3444555566542 2467899999999999999999883 3479999999999999988874433 8999999999998
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++ ++||+|++..+++++.+++ ...++++++++|||||++++.++..+
T Consensus 106 -~~-~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 106 -FE-EKYDMVVSALSIHHLEDED-----KKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp -CC-SCEEEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred -CC-CCceEEEEeCccccCCHHH-----HHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 66 8999999999999996532 45799999999999999999886543
No 49
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.53 E-value=2.8e-14 Score=147.05 Aligned_cols=134 Identities=15% Similarity=0.081 Sum_probs=104.4
Q ss_pred CHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHH
Q 004133 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (772)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~ 106 (772)
..+||..+.... ......+...+..++... .++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.
T Consensus 10 ~~~~y~~~~~~~--------~~~~~~~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~ 78 (240)
T 3dli_A 10 TSDYYFLFEEKF--------RGSRELVKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKF 78 (240)
T ss_dssp --CHHHHHHHHH--------TCCHHHHHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHH
T ss_pred hHHHHHHHHHHh--------CCCHHHHHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHH
Confidence 345666655432 223334555555555431 4678999999999999999999877 59999999999998
Q ss_pred HHHHhccCCCCcEEEEeeccCc--ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 107 MLRRNVRDRSDMRWRVMDMTSM--QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 107 a~~~~~~~~~~v~f~~~D~~~l--~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
++++ +++.++|+.++ + +++++||+|++..+++++..++ ...+++++.++|||||++++.+.....
T Consensus 79 a~~~-------~~~~~~d~~~~~~~-~~~~~fD~i~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 79 CEGK-------FNVVKSDAIEYLKS-LPDKYLDGVMISHFVEHLDPER-----LFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp HHTT-------SEEECSCHHHHHHT-SCTTCBSEEEEESCGGGSCGGG-----HHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred HHhh-------cceeeccHHHHhhh-cCCCCeeEEEECCchhhCCcHH-----HHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 8654 78999999886 6 7889999999999999997543 689999999999999999998876543
No 50
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.53 E-value=7.3e-14 Score=147.78 Aligned_cols=105 Identities=19% Similarity=0.282 Sum_probs=94.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..++..|. +|+|+|+|+.+++.++++....+.++++.++|+.+++ + +++||+|++..++++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN-I-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-C-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc-c-cCCccEEEEccchhh
Confidence 578999999999999999999987 7999999999999999887666668999999999988 5 889999999999999
Q ss_pred cccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 148 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+..+. ...+++++.++|||||+++++..
T Consensus 197 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 LNRER-----VPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCHHH-----HHHHHHHHHHhcCCCcEEEEEEe
Confidence 86544 67999999999999999877654
No 51
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.53 E-value=5.8e-14 Score=142.25 Aligned_cols=118 Identities=16% Similarity=0.118 Sum_probs=97.0
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC------CCcEEEEeecc
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~------~~v~f~~~D~~ 126 (772)
...+..++.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.+++++.... .++++.++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 18 MNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3445555543 467899999999999999999974 3589999999999999988874332 27999999998
Q ss_pred CcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 127 SMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 127 ~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
..+ +++++||+|++..+++++.++. ...+++++.++|||||++++...
T Consensus 95 ~~~-~~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 95 YQD-KRFHGYDAATVIEVIEHLDLSR-----LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCC-GGGCSCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccc-ccCCCcCEEeeHHHHHcCCHHH-----HHHHHHHHHHHcCCCEEEEEccC
Confidence 887 7778999999999999996533 67999999999999997776654
No 52
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=9.8e-14 Score=136.84 Aligned_cols=152 Identities=9% Similarity=0.083 Sum_probs=103.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEec-cc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDK-GG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~-~~ 144 (772)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++....+ .++++++.|+.+++.+.+++||+|++. +.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 468899999999999999999985 479999999999999988875433 579999988888653557899999876 32
Q ss_pred ccccccC-ccchHHHHHHHHHHHhccccCeEEEEEEcCchh-------hhhccccccc-CCcEEEEEEcCCCCCCCCCcc
Q 004133 145 LDALMEP-ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH-------VLGLLFPKFR-FGWKMSVHAIPQKSSSEPSLQ 215 (772)
Q Consensus 145 l~~l~~~-~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~-------~~~~l~~~~~-~~w~~~~~~~~~~~~~~~~l~ 215 (772)
+...... ...+.....+++++.++|||||++++..+.... ....++.... .+|.+....... ....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 175 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN----QINTP 175 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS----CSSCC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc----cCCCC
Confidence 2210000 001122568899999999999999998875321 1112333332 357776666543 22356
Q ss_pred eEEEEEEe
Q 004133 216 TFMVVADK 223 (772)
Q Consensus 216 ~f~~~~~K 223 (772)
++++.+.|
T Consensus 176 ~~~~~i~~ 183 (185)
T 3mti_A 176 PFLVMLEK 183 (185)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 67777666
No 53
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=6e-14 Score=143.99 Aligned_cols=128 Identities=19% Similarity=0.221 Sum_probs=104.3
Q ss_pred chhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCc
Q 004133 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (772)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l 128 (772)
.+......+..++... ..++.+|||+|||+|.++..+++.|. +++|+|+|+.|++.++++......++++.++|+.++
T Consensus 19 ~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL 96 (246)
T ss_dssp CHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC
T ss_pred cHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC
Confidence 4445566666666541 12678999999999999999999876 699999999999999888765555899999999998
Q ss_pred ccccCCCccEEEecc-cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 129 QVFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+ ++ ++||+|++.. +++++.+++ ....+++++.++|||||++++.......
T Consensus 97 ~-~~-~~fD~v~~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (246)
T 1y8c_A 97 N-IN-RKFDLITCCLDSTNYIIDSD----DLKKYFKAVSNHLKEGGVFIFDINSYYK 147 (246)
T ss_dssp C-CS-CCEEEEEECTTGGGGCCSHH----HHHHHHHHHHTTEEEEEEEEEEEECHHH
T ss_pred C-cc-CCceEEEEcCccccccCCHH----HHHHHHHHHHHhcCCCcEEEEEecCHHH
Confidence 8 66 8999999998 999985422 2679999999999999999986665443
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=5.1e-14 Score=143.03 Aligned_cols=111 Identities=28% Similarity=0.372 Sum_probs=94.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..++..+. +++++|+|+.+++.++++......+++++++|+.+++ +++++||+|++..++++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SCTTCEEEEEEESCGGG
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-CCCCcEEEEEEcCchHh
Confidence 478999999999999999999876 7999999999999998887665678999999999988 88899999999988544
Q ss_pred cccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh
Q 004133 148 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 185 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~ 185 (772)
....+ ...+++++.++|||||++++.+......
T Consensus 116 ~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 148 (227)
T 1ve3_A 116 FEPLE-----LNQVFKEVRRVLKPSGKFIMYFTDLREL 148 (227)
T ss_dssp CCHHH-----HHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCHHH-----HHHHHHHHHHHcCCCcEEEEEecChHHH
Confidence 33211 5789999999999999999988765443
No 55
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.52 E-value=6.2e-14 Score=143.91 Aligned_cols=114 Identities=17% Similarity=0.291 Sum_probs=98.8
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCC
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDE 134 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~ 134 (772)
..+..++.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++... .++++.++|+.+++ ++++
T Consensus 33 ~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~-~~~~ 106 (243)
T 3bkw_A 33 PALRAMLPE---VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLH-LPQD 106 (243)
T ss_dssp HHHHHHSCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCC-CCTT
T ss_pred HHHHHhccc---cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhcc-CCCC
Confidence 346666654 46789999999999999999998775799999999999999877633 47999999999998 8889
Q ss_pred CccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 135 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 135 sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+||+|++..+++++.+ ...++++++++|||||++++.+..
T Consensus 107 ~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 107 SFDLAYSSLALHYVED-------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CceEEEEeccccccch-------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9999999999999854 579999999999999999998754
No 56
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=6e-14 Score=145.24 Aligned_cols=136 Identities=17% Similarity=0.223 Sum_probs=101.4
Q ss_pred HHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHH
Q 004133 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (772)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a 107 (772)
.+||+..|.... ..+......+..++......++.+|||+|||+|.++..+++.|. +|+|+|+|+.|++.+
T Consensus 9 a~~yd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a 79 (252)
T 1wzn_A 9 AEYYDTIYRRRI--------ERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVA 79 (252)
T ss_dssp GGGHHHHTHHHH--------HTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcch--------hhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHH
Confidence 468888776431 11122233344443322224678999999999999999999886 799999999999999
Q ss_pred HHHhccCCCCcEEEEeeccCcccccCCCccEEEeccc-ccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 108 LRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGG-LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 108 ~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~-l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+++......++++.++|+.+++ ++ ++||+|++... +.++..+ ....+++++.++|||||++++..
T Consensus 80 ~~~~~~~~~~v~~~~~d~~~~~-~~-~~fD~v~~~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 80 RRKAKERNLKIEFLQGDVLEIA-FK-NEFDAVTMFFSTIMYFDEE-----DLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp HHHHHHTTCCCEEEESCGGGCC-CC-SCEEEEEECSSGGGGSCHH-----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECChhhcc-cC-CCccEEEEcCCchhcCCHH-----HHHHHHHHHHHHcCCCeEEEEec
Confidence 9887666668999999999987 54 78999998643 4443221 26899999999999999998754
No 57
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.52 E-value=1.7e-14 Score=150.05 Aligned_cols=151 Identities=16% Similarity=0.164 Sum_probs=107.3
Q ss_pred CCCCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHH
Q 004133 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (772)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~ 103 (772)
.|...+||+.+|..........++.. .....+..++.. ...++.+|||+|||+|.++..++..+..+|+|+|+|+.|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~ 91 (265)
T 2i62_A 15 HFNPRDYLEKYYSFGSRHCAENEILR--HLLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQN 91 (265)
T ss_dssp HCCHHHHHHHHHCCCSSCHHHHHHHH--HHHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHH
T ss_pred hcCHHHHHHHHhCcCCcchhHHHHHH--hhHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHH
Confidence 35667899999976521100011111 111223333332 124678999999999999999988876679999999999
Q ss_pred HHHHHHHhccCCC------------------------------Cc-EEEEeeccCcccccC---CCccEEEecccccccc
Q 004133 104 ISDMLRRNVRDRS------------------------------DM-RWRVMDMTSMQVFMD---ETFDVILDKGGLDALM 149 (772)
Q Consensus 104 I~~a~~~~~~~~~------------------------------~v-~f~~~D~~~l~~~~~---~sfDvVi~~~~l~~l~ 149 (772)
++.++++...... ++ ++.++|+.+...+++ ++||+|++..+++++.
T Consensus 92 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~ 171 (265)
T 2i62_A 92 LWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC 171 (265)
T ss_dssp HHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC
T ss_pred HHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc
Confidence 9999887643211 17 899999998752355 8999999999999664
Q ss_pred cCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 150 EPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 150 ~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
.. ......+++++.++|||||++++...
T Consensus 172 ~~---~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 172 PD---LPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp SS---HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC---hHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 42 11267999999999999999999874
No 58
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.52 E-value=4.3e-14 Score=141.83 Aligned_cols=111 Identities=16% Similarity=0.268 Sum_probs=94.0
Q ss_pred CCCCeEEEEcCCCchhH-HHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls-~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||+|||+|.++ ..++..|. +|+|+|+|+.+++.++++......++++.++|+.+++ +++++||+|++.+++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcChH
Confidence 35789999999999985 44555565 7999999999999998887655578999999999998 888999999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++...+ ...++++++++|||||++++.++..+.
T Consensus 100 ~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 100 FHMRKND-----VKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred HhCCHHH-----HHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 9884222 689999999999999999999877543
No 59
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.51 E-value=7.1e-14 Score=144.91 Aligned_cols=117 Identities=18% Similarity=0.116 Sum_probs=98.9
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
......+...+.. .++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .+++|.++|+.+
T Consensus 22 ~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 22 EEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred HHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 3445556666654 57889999999999999999887 54 79999999999999988875544 369999999999
Q ss_pred cccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 128 MQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 128 l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++ + +++||+|++.++++++.+ ...++++++++|||||++++.+.
T Consensus 98 ~~-~-~~~fD~V~~~~~~~~~~~-------~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 98 YV-A-NEKCDVAACVGATWIAGG-------FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CC-C-SSCEEEEEEESCGGGTSS-------SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CC-c-CCCCCEEEECCChHhcCC-------HHHHHHHHHHHcCCCeEEEEecC
Confidence 98 6 889999999999998865 36899999999999999998763
No 60
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.51 E-value=9.5e-14 Score=143.15 Aligned_cols=116 Identities=18% Similarity=0.233 Sum_probs=99.8
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccC
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMD 133 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~ 133 (772)
..+...+.. .++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....+ +++++.++|+.+++ +++
T Consensus 11 ~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~ 85 (239)
T 1xxl_A 11 GLMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPD 85 (239)
T ss_dssp HHHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCT
T ss_pred chHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCC
Confidence 345555554 6789999999999999999998875 79999999999999988764433 47999999999998 889
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++||+|++..+++++.+ ...+++++.++|||||++++.+...
T Consensus 86 ~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSD-------VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CcEEEEEECCchhhccC-------HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99999999999999865 5789999999999999999987654
No 61
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.51 E-value=3.1e-14 Score=152.71 Aligned_cols=114 Identities=18% Similarity=0.192 Sum_probs=90.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC-------CcEEEEeec------cCcc-cccC
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS-------DMRWRVMDM------TSMQ-VFMD 133 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~-------~v~f~~~D~------~~l~-~~~~ 133 (772)
++.+|||+|||+|..+..++..+..+|+|+|+|+.||+.|++++..... +++|.+.|+ .+++ .+++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999877767666656899999999999999988754332 267889888 3331 1567
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 185 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~ 185 (772)
++||+|++..+++++.+.++ ...++++++++|||||+|++.+.....+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~----~~~~l~~~~r~LkpGG~~i~~~~~~~~~ 175 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRH----YATVMNNLSELTASGGKVLITTMDGDKL 175 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTT----HHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCeeEEEECchHHHhCCHHH----HHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 89999999999988755432 5799999999999999999988775543
No 62
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.51 E-value=2.3e-14 Score=152.76 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=100.1
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC----CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~----~~v~f~~~D~~~ 127 (772)
.....+...+.. ++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++..... .+++|+++|+.+
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 444445555543 345999999999999999999986 69999999999999998876554 579999999999
Q ss_pred cccccCCCccEEEec-ccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhh
Q 004133 128 MQVFMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 128 l~~~~~~sfDvVi~~-~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~ 186 (772)
++ + +++||+|++. .+++++..+ ....+|+++.++|||||++++.++..+...
T Consensus 145 ~~-~-~~~fD~v~~~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 197 (299)
T 3g2m_A 145 FA-L-DKRFGTVVISSGSINELDEA-----DRRGLYASVREHLEPGGKFLLSLAMSEAAE 197 (299)
T ss_dssp CC-C-SCCEEEEEECHHHHTTSCHH-----HHHHHHHHHHHHEEEEEEEEEEEECCHHHH
T ss_pred CC-c-CCCcCEEEECCcccccCCHH-----HHHHHHHHHHHHcCCCcEEEEEeecCcccc
Confidence 98 5 7899988854 556665432 268999999999999999999998877654
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.51 E-value=1.5e-13 Score=142.73 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=92.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.....+++++.++|+.+++ +++++||+|++..+++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCchh
Confidence 4678999999999999999998865 7999999999999998887444568999999999998 8899999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
++.+ ...+++++.++|||||++++.
T Consensus 116 ~~~~-------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPD-------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTT-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC-------HHHHHHHHHHHCCCCcEEEEE
Confidence 9865 578999999999999999887
No 64
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.51 E-value=1e-13 Score=139.59 Aligned_cols=102 Identities=25% Similarity=0.350 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..+ +..+++++|+|+.+++.++++. +++++.++|+.+++ +++++||+|++..++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 107 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALP-FPGESFDVVLLFTTLEF 107 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCC-SCSSCEEEEEEESCTTT
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCC-CCCCcEEEEEEcChhhh
Confidence 6789999999999999887 5557999999999999998775 57899999999998 88999999999999999
Q ss_pred cccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 148 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+.+ ...+++++.++|||||++++.+.....
T Consensus 108 ~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 108 VED-------VERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp CSC-------HHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred cCC-------HHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 865 578999999999999999999876543
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.50 E-value=4.9e-14 Score=142.62 Aligned_cols=115 Identities=15% Similarity=0.142 Sum_probs=98.5
Q ss_pred HHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC--CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccC
Q 004133 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMD 133 (772)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g--~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~ 133 (772)
+...+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.++++..... .++++.++|+.+++ +++
T Consensus 29 ~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~ 104 (219)
T 3dh0_A 29 VLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-LPD 104 (219)
T ss_dssp HHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-SCS
T ss_pred HHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-CCC
Confidence 4444543 567899999999999999999874 3479999999999999988875433 47999999999998 889
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++||+|++..+++++.+ ...+++++.++|||||++++.++..
T Consensus 105 ~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSE-------PLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp SCEEEEEEESCGGGCSS-------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCeeEEEeehhhhhcCC-------HHHHHHHHHHHhCCCeEEEEEEecc
Confidence 99999999999999855 5789999999999999999987653
No 66
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=1.4e-13 Score=133.76 Aligned_cols=101 Identities=19% Similarity=0.303 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ .+++++.++| ++ +++++||+|++..+++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~-~~~~~~D~v~~~~~l~ 86 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP---KE-IPDNSVDFILFANSFH 86 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG---GG-SCTTCEEEEEEESCST
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CC-CCCCceEEEEEccchh
Confidence 4678999999999999999999875 899999999999999776 4589999999 66 7889999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++.+ ...+++++.++|||||++++.++...
T Consensus 87 ~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 87 DMDD-------KQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp TCSC-------HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred cccC-------HHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 9854 57999999999999999999987643
No 67
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.50 E-value=8.3e-14 Score=140.36 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=96.2
Q ss_pred HHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCC
Q 004133 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDET 135 (772)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~s 135 (772)
.+...+... .++.+|||+|||+|.++..++..|. +|+|+|+|+.+++.+++ ....++++.++|+.++ +++++
T Consensus 36 ~~~~~l~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~ 107 (218)
T 3ou2_A 36 AALERLRAG--NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQ 107 (218)
T ss_dssp HHHHHHTTT--TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSC--CCSSC
T ss_pred HHHHHHhcC--CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh---cCCCCeEEEecccccC--CCCCc
Confidence 344555421 4668999999999999999999876 79999999999998866 2336899999999987 47899
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
||+|++..+++++.++. ...+++++.++|||||++++.++..
T Consensus 108 ~D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 108 WDAVFFAHWLAHVPDDR-----FEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eeEEEEechhhcCCHHH-----HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99999999999987643 5799999999999999999998775
No 68
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=1.2e-13 Score=139.16 Aligned_cols=102 Identities=25% Similarity=0.314 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++. ++.+.++|+.+++ ++++||+|++..+++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD--AIDAYDAVWAHACLL 113 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC--CCSCEEEEEECSCGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC--CCCcEEEEEecCchh
Confidence 3578999999999999999999876 7999999999999998876 5788999999987 688999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++..++ ...+++++.++|||||++++....
T Consensus 114 ~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 114 HVPRDE-----LADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCHHH-----HHHHHHHHHHhcCCCcEEEEEEcC
Confidence 986322 679999999999999999988654
No 69
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.50 E-value=1.6e-13 Score=143.82 Aligned_cols=108 Identities=19% Similarity=0.329 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+ .++++.++|+.+++ +++++||+|++..+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCccEEEEech
Confidence 5788999999999999999988633479999999999999988875443 36999999999999 88999999999999
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++++.+ ...+++++.++|||||++++.++..
T Consensus 139 l~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 139 LHHMPD-------RGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTTSSC-------HHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhhCCC-------HHHHHHHHHHHcCCCeEEEEEEeec
Confidence 999865 4689999999999999999987653
No 70
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=1.1e-13 Score=145.40 Aligned_cols=106 Identities=23% Similarity=0.360 Sum_probs=94.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++..... +++++.++|+.+++ +++++||+|++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-FEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-SCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-CCCCCeeEEEEech
Confidence 578899999999999999999883 3579999999999999988875543 47999999999998 88999999999999
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++++.+ ...+++++.++|||||++++.+.
T Consensus 115 l~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 115 LEHLQS-------PEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGGCSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCC-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 999976 46899999999999999999864
No 71
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=8.4e-14 Score=145.59 Aligned_cols=117 Identities=17% Similarity=0.247 Sum_probs=99.8
Q ss_pred hhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc
Q 004133 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (772)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~ 129 (772)
+..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ .+++|.++|+.+++
T Consensus 19 ~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-----~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 19 DIRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVH-----PQVEWFTGYAENLA 89 (261)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCC-----TTEEEECCCTTSCC
T ss_pred cHHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhc-----cCCEEEECchhhCC
Confidence 34566677777764 5789999999999999999998765 799999999998766433 28999999999999
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++++||+|++..+++++.+ ...++++++++|| ||++++.++..+.
T Consensus 90 -~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 90 -LPDKSVDGVISILAIHHFSH-------LEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp -SCTTCBSEEEEESCGGGCSS-------HHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred -CCCCCEeEEEEcchHhhccC-------HHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 88999999999999999955 5799999999999 9999998887544
No 72
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=1.7e-13 Score=144.42 Aligned_cols=110 Identities=24% Similarity=0.439 Sum_probs=95.0
Q ss_pred HHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCc
Q 004133 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETF 136 (772)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sf 136 (772)
+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++. +++++.++|+.+++ + +++|
T Consensus 49 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~-~-~~~f 118 (279)
T 3ccf_A 49 LLQLLNP---QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY----PHLHFDVADARNFR-V-DKPL 118 (279)
T ss_dssp HHHHHCC---CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCC-C-SSCE
T ss_pred HHHHhCC---CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC----CCCEEEECChhhCC-c-CCCc
Confidence 4455544 4678999999999999999998654 7999999999999997765 57999999999998 6 6899
Q ss_pred cEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 137 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 137 DvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
|+|++..+++++.+ ...+++++.++|||||++++.+....
T Consensus 119 D~v~~~~~l~~~~d-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 119 DAVFSNAMLHWVKE-------PEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CEEEEcchhhhCcC-------HHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 99999999999865 56899999999999999999877644
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.48 E-value=7.2e-14 Score=143.76 Aligned_cols=111 Identities=19% Similarity=0.093 Sum_probs=91.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCc--ccccCCCccEEEe-cc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--QVFMDETFDVILD-KG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l--~~~~~~sfDvVi~-~~ 143 (772)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++......+++++++|+.++ + +++++||+|++ ..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc-cCCCceEEEEECCc
Confidence 36789999999999999999887666899999999999999988866667899999999998 7 88999999998 44
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.+ ..... .......++++++|+|||||+|++..+.
T Consensus 138 ~~-~~~~~--~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PL-SEETW--HTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CC-BGGGT--TTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cc-chhhh--hhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 44 22221 1222567899999999999999987654
No 74
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.47 E-value=2.2e-13 Score=144.04 Aligned_cols=109 Identities=15% Similarity=0.232 Sum_probs=95.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..++..|. +|+|+|+|+.+++.++++....+ ++++++++|+.+++.+.+++||+|++.+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999876 79999999999999988875543 479999999999865678999999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++.+ ...+++++.++|||||++++.++....
T Consensus 147 ~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 147 EWVAD-------PRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp GGCSC-------HHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred hcccC-------HHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 99965 468999999999999999999876543
No 75
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.47 E-value=8.5e-13 Score=131.43 Aligned_cols=155 Identities=12% Similarity=0.109 Sum_probs=111.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEec
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDK 142 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~ 142 (772)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....+ .+++++++|+.+++.+.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 46789999999999999999887 34589999999999999988875543 479999999988753566899999987
Q ss_pred ccccccccC--ccchHHHHHHHHHHHhccccCeEEEEEEcCch-------hhhhcccccc-cCCcEEEEEEcCCCCCCCC
Q 004133 143 GGLDALMEP--ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES-------HVLGLLFPKF-RFGWKMSVHAIPQKSSSEP 212 (772)
Q Consensus 143 ~~l~~l~~~--~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~-------~~~~~l~~~~-~~~w~~~~~~~~~~~~~~~ 212 (772)
..+....+. .........+++++.++|||||++++..+... .....++... ..+|.+....+.. ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~----~~ 176 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFIN----QA 176 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETT----CC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEecc----Cc
Confidence 655110000 01112256799999999999999999886531 1122333333 3468777776654 23
Q ss_pred CcceEEEEEEecC
Q 004133 213 SLQTFMVVADKEN 225 (772)
Q Consensus 213 ~l~~f~~~~~K~~ 225 (772)
..++|+++++|..
T Consensus 177 ~~pp~~~~~~~~~ 189 (197)
T 3eey_A 177 NCPPILVCIEKIS 189 (197)
T ss_dssp SCCCEEEEEEECC
T ss_pred cCCCeEEEEEEcc
Confidence 4678888888754
No 76
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.47 E-value=1.8e-13 Score=140.10 Aligned_cols=135 Identities=19% Similarity=0.245 Sum_probs=104.2
Q ss_pred HHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHH
Q 004133 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (772)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a 107 (772)
.++|+..+.... ..|......+...+..++ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 9 ADVYDLFYLGRG----KDYAAEASDIADLVRSRT-----PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHA 78 (239)
T ss_dssp HHHHHHHHHHHT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhccH----hhHHHHHHHHHHHHHHhc-----CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHH
Confidence 568888876541 113222233444454444 3578999999999999999998865 799999999999999
Q ss_pred HHHhccCCCCcEEEEeeccCcccccCCCccEEEe-cccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 108 LRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILD-KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 108 ~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~-~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++. +++++.++|+.+++ + +++||+|++ ..+++++.+++ ....+++++.++|||||++++.++..
T Consensus 79 ~~~~----~~~~~~~~d~~~~~-~-~~~~D~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 79 RKRL----PDATLHQGDMRDFR-L-GRKFSAVVSMFSSVGYLKTTE----ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHC----TTCEEEECCTTTCC-C-SSCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHhC----CCCEEEECCHHHcc-c-CCCCcEEEEcCchHhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 8765 46899999999988 5 789999995 55888885432 26799999999999999999876543
No 77
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=1.7e-13 Score=143.11 Aligned_cols=115 Identities=21% Similarity=0.285 Sum_probs=95.2
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+..++. ++.+|||+|||+|.++..+++.|. +|+|+|+|+.|++.++++.. . .+.++|+.+++
T Consensus 42 ~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~~- 109 (260)
T 2avn_A 42 RLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDLP- 109 (260)
T ss_dssp HHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC---S--CEEECCTTSCC-
T ss_pred HHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHCC-
Confidence 344555555552 578999999999999999999876 79999999999999987763 1 28999999998
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++++||+|++.+++.++..+ ...+++++.++|||||++++.+....
T Consensus 110 ~~~~~fD~v~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 110 FPSGAFEAVLALGDVLSYVEN------KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp SCTTCEEEEEECSSHHHHCSC------HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCCCCEEEEEEcchhhhcccc------HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 889999999998877666432 57899999999999999999887643
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.46 E-value=1.3e-13 Score=146.03 Aligned_cols=116 Identities=21% Similarity=0.268 Sum_probs=96.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccc-cCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVF-MDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~-~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.++++..... .++++.++|+.+++ + ++++||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-MDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-CCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc-cCCCCCcCEEEECc
Confidence 3678999999999999999988887689999999999999988875443 35899999999988 7 688999999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhh
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~ 186 (772)
+++++... ......+++++.++|||||++++.+.....+.
T Consensus 142 ~l~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 181 (298)
T 1ri5_A 142 SFHYAFST---SESLDIAQRNIARHLRPGGYFIMTVPSRDVIL 181 (298)
T ss_dssp CGGGGGSS---HHHHHHHHHHHHHTEEEEEEEEEEEECHHHHH
T ss_pred hhhhhcCC---HHHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 99874221 11267999999999999999999987755443
No 79
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.46 E-value=3.3e-13 Score=144.85 Aligned_cols=108 Identities=22% Similarity=0.270 Sum_probs=95.7
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .+++|.++|+.+++ +++++||+|++..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEECC
Confidence 57889999999999999999988 65 69999999999999988876544 36999999999998 8899999999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++++ + ...+++++.++|||||++++.+.....
T Consensus 194 ~l~~~-~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 194 STMYV-D-------LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred chhhC-C-------HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 99998 3 479999999999999999998865443
No 80
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=1.5e-12 Score=132.94 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=107.8
Q ss_pred CCCCeEEEEcCC-CchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCG-NSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG-~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||+||| +|.++..++..+..+|+|+|+|+.+++.++++....+.+++++++|+..+..+++++||+|+++..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 468999999999 9999999998833479999999999999998876665689999999865543667899999988665
Q ss_pred cccccCc------------cchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccc-cCCcEEEEEEcCCCCCCCC
Q 004133 146 DALMEPE------------LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHAIPQKSSSEP 212 (772)
Q Consensus 146 ~~l~~~~------------~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~-~~~w~~~~~~~~~~~~~~~ 212 (772)
......+ .+......+++++.++|||||+++++..........+...+ ..+|.+....... .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-----g 208 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKV-----G 208 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECC-----C
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecC-----C
Confidence 5432211 11222578999999999999999987655443333343333 3377776665533 1
Q ss_pred CcceEEEEEEecCC
Q 004133 213 SLQTFMVVADKENS 226 (772)
Q Consensus 213 ~l~~f~~~~~K~~~ 226 (772)
.....+...+|...
T Consensus 209 ~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 209 TRWRHSLIFFKGIS 222 (230)
T ss_dssp C-CEEEEEEECCC-
T ss_pred CeEEEEEEEecccc
Confidence 23344555565433
No 81
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.45 E-value=4.7e-13 Score=141.72 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=93.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.++++......+++|.++|+.+++ + +++||+|++..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-L-NDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-C-SSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-c-CCCeeEEEECCh
Confidence 56789999999999999999987 2 247999999999999999887665668999999999988 6 579999999999
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++++.+ ...++++++++|||||++++.+..
T Consensus 99 l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMTT-------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCSS-------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCCC-------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 999865 469999999999999999998755
No 82
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.45 E-value=4.4e-13 Score=137.52 Aligned_cols=121 Identities=22% Similarity=0.299 Sum_probs=99.6
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
......+..++. ++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.++++......++++.++|+.+++
T Consensus 21 ~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~- 92 (243)
T 3d2l_A 21 PEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE- 92 (243)
T ss_dssp HHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-
T ss_pred HHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-
Confidence 345555666664 4689999999999999999887 57999999999999999887655678999999999988
Q ss_pred ccCCCccEEEecc-cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 131 FMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 131 ~~~~sfDvVi~~~-~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
++ ++||+|++.. +++++.+.+ ....+++++.++|||||++++.......
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 142 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEA----DVKQTFDSAARLLTDGGKLLFDVHSPYK 142 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CC-CCcCEEEEeCCchhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEcCCHHH
Confidence 55 8999999986 888875422 2678999999999999999987655433
No 83
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=2.1e-12 Score=129.51 Aligned_cols=119 Identities=13% Similarity=-0.015 Sum_probs=96.7
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l 128 (772)
..+...+...+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ .+++++++|+.+.
T Consensus 26 ~~i~~~~l~~l~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 26 QEVRAVTLSKLRL---QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred HHHHHHHHHHcCC---CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 4555566666654 578999999999999999999985 3579999999999999988764433 5799999999775
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
. ...++||+|++...+. . ...+++++.++|||||++++......
T Consensus 103 ~-~~~~~~D~i~~~~~~~---~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 103 L-DDLPDPDRVFIGGSGG---M-------LEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp C-TTSCCCSEEEESCCTT---C-------HHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred h-hcCCCCCEEEECCCCc---C-------HHHHHHHHHHhcCCCeEEEEEecccc
Confidence 4 3447899999887765 1 57899999999999999999876644
No 84
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.44 E-value=7.9e-13 Score=141.11 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=95.4
Q ss_pred CCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEec
Q 004133 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDK 142 (772)
Q Consensus 66 ~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~ 142 (772)
..++.+|||+|||+|.++..+++. | .+|+|+|+|+.+++.++++....+ .++++.++|+.++ +++||+|++.
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD~v~~~ 144 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEPVDRIVSL 144 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCCCSEEEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCCccEEEEc
Confidence 367889999999999999999998 7 479999999999999998875543 2699999999765 5899999999
Q ss_pred ccccccccCcc--chHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 143 GGLDALMEPEL--GHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 143 ~~l~~l~~~~~--~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
.+++++.+++. +......+++++.++|||||++++.++..+
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 99999976421 112367999999999999999999887654
No 85
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.43 E-value=2.3e-13 Score=144.41 Aligned_cols=158 Identities=15% Similarity=0.110 Sum_probs=102.3
Q ss_pred hhcccccCCCCHHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEE
Q 004133 17 DLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITN 96 (772)
Q Consensus 17 ~lP~~~~~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~g 96 (772)
.+-.-...|....||+.+|.... .....--.........+..++... ..++.+|||+|||+|..+..++..+..+|+|
T Consensus 22 ~~~~~y~~~~~~~y~~~~y~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~g 99 (289)
T 2g72_A 22 AVASAYQRFEPRAYLRNNYAPPR-GDLCNPNGVGPWKLRCLAQTFATG-EVSGRTLIDIGSGPTVYQLLSACSHFEDITM 99 (289)
T ss_dssp HHHHHGGGCCHHHHHHHHHSTTT-TCCSSTTSHHHHHHHHHHHHHHTS-CSCCSEEEEETCTTCCGGGTTGGGGCSEEEE
T ss_pred HHHHHHhccCHHHHHHHHhcCcc-cchhhhhHHHHHHHHHHHHHhCCC-CCCCCeEEEECCCcChHHHHhhccCCCeEEE
Confidence 34444445666688888886542 110000000111223344444320 1257899999999999665454443458999
Q ss_pred EeCCHHHHHHHHHHhccCCC-------------------------------CcEEEEeeccC-cc----cccCCCccEEE
Q 004133 97 VDFSKVVISDMLRRNVRDRS-------------------------------DMRWRVMDMTS-MQ----VFMDETFDVIL 140 (772)
Q Consensus 97 vDiS~~~I~~a~~~~~~~~~-------------------------------~v~f~~~D~~~-l~----~~~~~sfDvVi 140 (772)
+|+|+.|++.++++...... .++++++|+.+ ++ .+++++||+|+
T Consensus 100 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~ 179 (289)
T 2g72_A 100 TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 179 (289)
T ss_dssp ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEE
T ss_pred eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEE
Confidence 99999999999876532110 14577789988 54 13456799999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+..+++++.... .....+|++++|+|||||+|++..
T Consensus 180 ~~~~l~~~~~~~---~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 180 SAFCLEAVSPDL---ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EESCHHHHCSSH---HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ehhhhhhhcCCH---HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999964420 116799999999999999999874
No 86
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.42 E-value=2.3e-13 Score=140.50 Aligned_cols=114 Identities=18% Similarity=0.087 Sum_probs=90.4
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc-cccC
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-VFMD 133 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~-~~~~ 133 (772)
..+...+. .++.+|||||||+|..+..+++.+..++|+||+|+.|++.|+++......++.++.+|+.++. .+++
T Consensus 51 ~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (236)
T 3orh_A 51 HALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD 126 (236)
T ss_dssp HHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT
T ss_pred HHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc
Confidence 33444554 378899999999999999998875557999999999999999988777778999999987642 2778
Q ss_pred CCccEEEeccc-----ccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 134 ETFDVILDKGG-----LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 134 ~sfDvVi~~~~-----l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
++||.|+...+ +.++.+ ...++++++|+|||||+|++..
T Consensus 127 ~~FD~i~~D~~~~~~~~~~~~~-------~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 127 GHFDGILYDTYPLSEETWHTHQ-------FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TCEEEEEECCCCCBGGGTTTHH-------HHHHHHTHHHHEEEEEEEEECC
T ss_pred cCCceEEEeeeecccchhhhcc-------hhhhhhhhhheeCCCCEEEEEe
Confidence 99999974322 223222 6789999999999999998654
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.42 E-value=2.3e-12 Score=129.95 Aligned_cols=118 Identities=13% Similarity=0.048 Sum_probs=94.6
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-C-CcEEEEeeccCc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTSM 128 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~-~v~f~~~D~~~l 128 (772)
..+...+...+.. .++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....+ . +++++++|+.+.
T Consensus 41 ~~~~~~~l~~l~~---~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAP---RRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCC---CCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3555556666665 5788999999999999999999854 79999999999999988875443 3 699999999984
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 185 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~ 185 (772)
. ...+.||+|++.+.+ . .. +++++.++|||||++++........
T Consensus 117 ~-~~~~~~D~v~~~~~~----~-------~~-~l~~~~~~LkpgG~lv~~~~~~~~~ 160 (204)
T 3njr_A 117 L-ADLPLPEAVFIGGGG----S-------QA-LYDRLWEWLAPGTRIVANAVTLESE 160 (204)
T ss_dssp G-TTSCCCSEEEECSCC----C-------HH-HHHHHHHHSCTTCEEEEEECSHHHH
T ss_pred c-ccCCCCCEEEECCcc----c-------HH-HHHHHHHhcCCCcEEEEEecCcccH
Confidence 3 244689999987644 1 45 9999999999999999988775543
No 88
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.42 E-value=1.2e-12 Score=135.68 Aligned_cols=102 Identities=19% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.|++.++++ .+++++.++|+.+++ ++++||+|++..++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l 105 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK--PAQKADLLYANAVF 105 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC--CSSCEEEEEEESCG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC--ccCCcCEEEEeCch
Confidence 57789999999999999999887 234699999999999999776 357999999999987 67899999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++.+ ...++++++++|||||++++.+..
T Consensus 106 ~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 106 QWVPD-------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GGSTT-------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hhCCC-------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 99855 578999999999999999998754
No 89
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.42 E-value=1.7e-12 Score=137.16 Aligned_cols=115 Identities=17% Similarity=0.233 Sum_probs=94.8
Q ss_pred HhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCC
Q 004133 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDET 135 (772)
Q Consensus 59 ~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~s 135 (772)
.++......++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .++++.++|+.+++ ++
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~ 129 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----EP 129 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----CC
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----CC
Confidence 3344333367889999999999999999854 76 79999999999999988875433 47999999997654 78
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
||+|++.++++++..++ ...+++++.++|||||++++.++...
T Consensus 130 fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHER-----YDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp CSEEEEESCGGGTCTTT-----HHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred eeEEEEeCchhhcChHH-----HHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 99999999999995433 67999999999999999999886644
No 90
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=9.4e-13 Score=133.71 Aligned_cols=98 Identities=20% Similarity=0.214 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..++.. +++|+|+.+++.++++ ++++.++|+.+++ +++++||+|++..++++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLP-LKDESFDFALMVTTICF 114 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCC-SCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCC-CCCCCeeEEEEcchHhh
Confidence 4789999999999999988654 9999999999988765 6899999999998 88899999999999999
Q ss_pred cccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 148 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+.+ ...+++++.++|+|||++++.+.....
T Consensus 115 ~~~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~ 144 (219)
T 1vlm_A 115 VDD-------PERALKEAYRILKKGGYLIVGIVDRES 144 (219)
T ss_dssp SSC-------HHHHHHHHHHHEEEEEEEEEEEECSSS
T ss_pred ccC-------HHHHHHHHHHHcCCCcEEEEEEeCCcc
Confidence 855 568999999999999999998866543
No 91
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.41 E-value=6.7e-13 Score=139.03 Aligned_cols=111 Identities=19% Similarity=0.260 Sum_probs=87.4
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc---
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV--- 130 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~--- 130 (772)
...+...+.. .++.+|||+|||+|.++..|++.|. +|+++|+|+.|++.++++.... ++.+|+.+++.
T Consensus 34 ~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 34 RENDIFLENI---VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCC
T ss_pred HHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccccc
Confidence 3345555544 5788999999999999999999986 7999999999999998887433 34455554430
Q ss_pred -ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 131 -FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 131 -~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
..+++||+|++..+++++..++ ...+++++.++| |||++++..
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~~~~~-----~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRFTTEE-----ARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp GGGTTCCSEEEEESCGGGSCHHH-----HHHHHHHHHHHH-TTSEEEEEE
T ss_pred cccCCCccEEEEhhhhHhCCHHH-----HHHHHHHHHHhC-cCcEEEEEe
Confidence 1257999999999999885533 678999999999 999998764
No 92
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.40 E-value=2.2e-12 Score=138.58 Aligned_cols=116 Identities=10% Similarity=0.138 Sum_probs=96.3
Q ss_pred HhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCC
Q 004133 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDET 135 (772)
Q Consensus 59 ~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~s 135 (772)
..+......++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .++++.++|+.+++ ++
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~ 155 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----EP 155 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----CC
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----CC
Confidence 3343333367889999999999999999987 76 79999999999999988875443 46999999997764 78
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
||+|++..+++++..++ ...+++++.++|||||++++.++....
T Consensus 156 fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHEN-----YDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CSEEEEESCGGGTCGGG-----HHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred cCEEEEeChHHhcCHHH-----HHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 99999999999985432 679999999999999999998876543
No 93
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.40 E-value=8.4e-13 Score=133.51 Aligned_cols=104 Identities=23% Similarity=0.315 Sum_probs=87.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCc---ccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM---QVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l---~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++ .++.+.++|+.++ +...+++||+|++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 3568999999999999999999876 799999999999999765 4678999998887 412344599999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+++ ..+ ...++++++++|||||++++.++....
T Consensus 125 ~l~-~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 125 ALL-HQD-------IIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CCC-SSC-------CHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred hhh-hhh-------HHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 998 333 468999999999999999999876543
No 94
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.40 E-value=8.7e-13 Score=130.83 Aligned_cols=109 Identities=12% Similarity=0.026 Sum_probs=90.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..++..|..+|+++|+|+.+++.++++..... .+++++++|+.++. .+++++||+|++...+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 678999999999999998888887789999999999999988875443 47999999998864 1347899999998776
Q ss_pred cccccCccchHHHHHHHHHHHh--ccccCeEEEEEEcCc
Q 004133 146 DALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLAE 182 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~r--vLkpGG~~ii~~~~~ 182 (772)
++... ....+++++.+ +|+|||++++.+...
T Consensus 124 ~~~~~------~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDSA------DVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCHH------HHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred Ccchh------hHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 65421 16789999999 999999999987554
No 95
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.40 E-value=7.7e-13 Score=130.01 Aligned_cols=118 Identities=16% Similarity=0.192 Sum_probs=96.2
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l 128 (772)
..+...+...+.. .++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++++..... .++++.++|+.+
T Consensus 19 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEP---GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE- 93 (192)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-
T ss_pred HHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-
Confidence 3556666666654 578899999999999999999887 689999999999999988765443 479999999987
Q ss_pred ccccC-CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 129 QVFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 129 ~~~~~-~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
. +++ ++||+|++.+++++ ...+++++.++|+|||++++.+.....
T Consensus 94 ~-~~~~~~~D~v~~~~~~~~----------~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 94 A-LCKIPDIDIAVVGGSGGE----------LQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp H-HTTSCCEEEEEESCCTTC----------HHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred h-cccCCCCCEEEECCchHH----------HHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 2 333 68999998877643 468999999999999999998876544
No 96
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.40 E-value=2.8e-13 Score=147.61 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=92.4
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCccc
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQV 130 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~ 130 (772)
....+.+.+.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+ |++.|+++....+ .+++++++|+.+++
T Consensus 52 ~~~~i~~~~~~---~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~- 126 (340)
T 2fyt_A 52 YRDFIYQNPHI---FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH- 126 (340)
T ss_dssp HHHHHHHCGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-
T ss_pred HHHHHHhhhhh---cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-
Confidence 33445554433 46789999999999999999998877899999997 9999988775443 57999999999998
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
+++++||+|++..+...+.... ....++.++.++|||||+++
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~~~~----~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLLFES----MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBTTTC----HHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhccCHH----HHHHHHHHHHhhcCCCcEEE
Confidence 8889999999977544443322 16789999999999999987
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.39 E-value=1.8e-12 Score=131.48 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=85.9
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCc--
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-- 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l-- 128 (772)
.+...+...+. ....++.+|||+|||+|.++..+++. |..+|+|+|+|+.|++.+.+++.. ..++.++++|+.+.
T Consensus 42 ~l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~ 119 (210)
T 1nt2_A 42 KLAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWK 119 (210)
T ss_dssp HHHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGG
T ss_pred HHHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchh
Confidence 44444444443 22357889999999999999999886 334799999999999888766533 35789999999874
Q ss_pred --ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 129 --QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 129 --~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+ +. ++||+|++.. ..++ ....++++++++|||||++++..
T Consensus 120 ~~~-~~-~~fD~V~~~~-----~~~~----~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 120 YSG-IV-EKVDLIYQDI-----AQKN----QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp TTT-TC-CCEEEEEECC-----CSTT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc-cc-cceeEEEEec-----cChh----HHHHHHHHHHHHhCCCCEEEEEE
Confidence 3 33 7999999862 1111 14566999999999999999884
No 98
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.39 E-value=8.8e-13 Score=141.53 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=94.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc--------CCCCcEEEEeeccCcc---ccc--CC
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR--------DRSDMRWRVMDMTSMQ---VFM--DE 134 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~--------~~~~v~f~~~D~~~l~---~~~--~~ 134 (772)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.++++... ...+++|+++|+.+++ .++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5789999999999999999887666899999999999999887643 2236899999999874 133 45
Q ss_pred CccEEEeccccccc-ccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhh
Q 004133 135 TFDVILDKGGLDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLG 187 (772)
Q Consensus 135 sfDvVi~~~~l~~l-~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~ 187 (772)
+||+|++..+++++ .+.+ ....+++++.++|||||++++.+.....+..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~----~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~ 163 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYE----QADMMLRNACERLSPGGYFIGTTPNSFELIR 163 (313)
T ss_dssp CEEEEEEETCGGGGGGSHH----HHHHHHHHHHTTEEEEEEEEEEEECHHHHHH
T ss_pred CEEEEEEecchhhccCCHH----HHHHHHHHHHHHhCCCcEEEEecCChHHHHH
Confidence 99999999999988 3311 2579999999999999999999987655443
No 99
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.39 E-value=8.2e-12 Score=132.34 Aligned_cols=142 Identities=13% Similarity=0.154 Sum_probs=99.9
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhH-HHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEE
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLS-EHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRV 122 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls-~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~ 122 (772)
+|..|..+...-..++.. .++.+|||+|||+|.++ ..++.. |. +|+|+|+|+.|++.|+++....+ .+++|++
T Consensus 103 y~~~~~~l~~~E~~la~l---~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~ 178 (298)
T 3fpf_A 103 FYPRYLELLKNEAALGRF---RRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVIT 178 (298)
T ss_dssp THHHHHHHHHHHHHHTTC---CTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CcccHHHHHHHHHHHcCC---CCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEE
Confidence 444444444333334443 68999999999999876 445553 54 79999999999999998875433 5899999
Q ss_pred eeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhccc----ccccCCcE
Q 004133 123 MDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLF----PKFRFGWK 198 (772)
Q Consensus 123 ~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~----~~~~~~w~ 198 (772)
+|+.+++ +++||+|+.... . ++ ..++++++.|+|||||++++..... ++..+. .....+|.
T Consensus 179 gDa~~l~---d~~FDvV~~~a~---~--~d-----~~~~l~el~r~LkPGG~Lvv~~~~~--~r~~l~~~v~~~~~~gf~ 243 (298)
T 3fpf_A 179 GDETVID---GLEFDVLMVAAL---A--EP-----KRRVFRNIHRYVDTETRIIYRTYTG--MRAILYAPVSDDDITGFR 243 (298)
T ss_dssp SCGGGGG---GCCCSEEEECTT---C--SC-----HHHHHHHHHHHCCTTCEEEEEECCG--GGGGSSCCCCTGGGTTEE
T ss_pred CchhhCC---CCCcCEEEECCC---c--cC-----HHHHHHHHHHHcCCCcEEEEEcCcc--hhhhccccCChhhhhhhh
Confidence 9998865 689999997554 1 12 5799999999999999999987532 122111 12233677
Q ss_pred EEEEEcCC
Q 004133 199 MSVHAIPQ 206 (772)
Q Consensus 199 ~~~~~~~~ 206 (772)
......+.
T Consensus 244 ~~~~~~p~ 251 (298)
T 3fpf_A 244 RAGVVLPS 251 (298)
T ss_dssp EEEEECCC
T ss_pred heeEECCC
Confidence 77666554
No 100
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.38 E-value=1e-12 Score=145.35 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=92.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccC---------CCCcEEEEeeccCc------c
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD---------RSDMRWRVMDMTSM------Q 129 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~---------~~~v~f~~~D~~~l------~ 129 (772)
.++.+|||+|||+|.++..+++. ...+|+|+|+|+.+++.++++.... .++++|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999886 2347999999999999998775321 26899999999997 7
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++||+|++..+++++.+ ...++++++++|||||++++.++.
T Consensus 162 -~~~~~fD~V~~~~~l~~~~d-------~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 -VPDSSVDIVISNCVCNLSTN-------KLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp -CCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCCCEEEEEEccchhcCCC-------HHHHHHHHHHHcCCCCEEEEEEec
Confidence 88999999999999999865 579999999999999999998654
No 101
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.38 E-value=1.4e-12 Score=133.22 Aligned_cols=112 Identities=12% Similarity=0.079 Sum_probs=92.4
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
+.+...+...+.. .++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++++..... ++++.++|+.+..
T Consensus 56 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~- 129 (231)
T 1vbf_A 56 LNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGY- 129 (231)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCC-
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCccccc-
Confidence 3455556666654 578899999999999999999987 589999999999999988875444 8999999998843
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
..+++||+|++..+++++. +++.++|+|||++++....
T Consensus 130 ~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL-------------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEECCcHHHHH-------------HHHHHHcCCCcEEEEEEcC
Confidence 3568999999999988763 3688999999999998754
No 102
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.38 E-value=8.6e-13 Score=141.20 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=93.5
Q ss_pred CCCCeEEEEcCCCchhHHHHH--HcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEec
Q 004133 67 SPPPQILVPGCGNSRLSEHLY--DAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDK 142 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La--~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~ 142 (772)
.++.+|||+|||+|.++..++ ..+..+|+|+|+|+.+++.++++....+. +++|+++|+.+++ ++ ++||+|++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~fD~v~~~ 194 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TR-EGYDLLTSN 194 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CC-SCEEEEECC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-cc-CCeEEEEEC
Confidence 468899999999999999985 23345799999999999999988755443 4999999999998 77 999999999
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++++++.+++ ....+++++.++|||||++++.++..+
T Consensus 195 ~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 195 GLNIYEPDDA----RVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp SSGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred ChhhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 9999986643 145689999999999999999876654
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.38 E-value=2.1e-12 Score=129.93 Aligned_cols=113 Identities=18% Similarity=0.139 Sum_probs=93.9
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~ 129 (772)
+.....+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++....+ .++++.++|+.+..
T Consensus 63 ~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 63 PYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 4555566666654 678999999999999999999985 479999999999999988875433 47999999999876
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
..+++||+|++..+++++.. ++.++|||||++++..-.
T Consensus 139 -~~~~~~D~i~~~~~~~~~~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 -QARAPFDAIIVTAAPPEIPT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -GGGCCEEEEEESSBCSSCCT-------------HHHHTEEEEEEEEEEECS
T ss_pred -ccCCCccEEEEccchhhhhH-------------HHHHhcccCcEEEEEEcC
Confidence 56789999999999888743 578999999999987654
No 104
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=4.3e-12 Score=123.82 Aligned_cols=133 Identities=10% Similarity=0.129 Sum_probs=102.0
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~ 129 (772)
..+...+...+.. .++.+|||+|||+|.++..++. +..+++++|+|+.+++.++++....+ .++++.++|+.+ +
T Consensus 21 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 21 EEIRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred HHHHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 3555666666654 5778999999999999999988 45589999999999999988875444 479999999988 5
Q ss_pred cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccc-cCCcEEEEEE
Q 004133 130 VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHA 203 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~-~~~w~~~~~~ 203 (772)
+++++||+|++..+ .. ...+++++.++ |||++++.+.......+ +...+ ..+|.+....
T Consensus 96 -~~~~~~D~i~~~~~----~~-------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~-~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 96 -LDKLEFNKAFIGGT----KN-------IEKIIEILDKK--KINHIVANTIVLENAAK-IINEFESRGYNVDAVN 155 (183)
T ss_dssp -GGGCCCSEEEECSC----SC-------HHHHHHHHHHT--TCCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEE
T ss_pred -ccCCCCcEEEECCc----cc-------HHHHHHHHhhC--CCCEEEEEecccccHHH-HHHHHHHcCCeEEEEE
Confidence 67789999999877 11 57899999999 99999999876554433 22222 2356666543
No 105
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.37 E-value=7.5e-13 Score=144.76 Aligned_cols=104 Identities=14% Similarity=0.121 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+ |++.|+++....+. +++++++|+.+++ +++++||+|++..+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 35789999999999999999999887899999995 99999887755443 4999999999998 88899999999876
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
.+++..... ...++.++.++|||||+++
T Consensus 143 ~~~l~~~~~----~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 143 GYCLFYESM----LNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BBTBTBTCC----HHHHHHHHHHHEEEEEEEE
T ss_pred cccccCchh----HHHHHHHHHHhCCCCCEEc
Confidence 665544332 6789999999999999987
No 106
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.36 E-value=4.3e-12 Score=123.66 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=91.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSM 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l 128 (772)
.+...+...+.. .++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++....+. ++ ++++|+.+
T Consensus 12 ~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~- 86 (178)
T 3hm2_A 12 HVRALAISALAP---KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR- 86 (178)
T ss_dssp HHHHHHHHHHCC---CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG-
T ss_pred HHHHHHHHHhcc---cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh-
Confidence 445555666654 57789999999999999999887 345799999999999999887654432 57 88888865
Q ss_pred ccccC--CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 129 QVFMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 129 ~~~~~--~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
. +++ ++||+|++.+.+++ ..+++++.++|||||++++.++..+.
T Consensus 87 ~-~~~~~~~~D~i~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 87 A-FDDVPDNPDVIFIGGGLTA-----------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp G-GGGCCSCCSEEEECC-TTC-----------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred h-hhccCCCCCEEEECCcccH-----------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 2 344 89999999888876 15899999999999999998876544
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.36 E-value=5.1e-12 Score=129.85 Aligned_cols=124 Identities=21% Similarity=0.242 Sum_probs=99.1
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~-~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~ 123 (772)
|......+...+..-++....+|+++|||+|||+|.++..+++. |. ..|+++|+|+.|++.+++++ ...+++..+..
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a-~~~~ni~~V~~ 133 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVV-RDRRNIFPILG 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHS-TTCTTEEEEES
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhh-HhhcCeeEEEE
Confidence 76666678887877777666789999999999999999999987 43 57999999999999998776 44568999999
Q ss_pred eccCcc--cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 124 DMTSMQ--VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 124 D~~~l~--~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
|+.+.. .+..+++|+|++.... . + ....++.+++++|||||++++..
T Consensus 134 d~~~p~~~~~~~~~vDvVf~d~~~--~---~----~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 134 DARFPEKYRHLVEGVDGLYADVAQ--P---E----QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCCC--T---T----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccCccccccccceEEEEEEeccC--C---h----hHHHHHHHHHHhccCCCEEEEEE
Confidence 987643 1566889998853221 1 1 15689999999999999998864
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.36 E-value=3.1e-12 Score=128.32 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC-CcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS-DMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~-~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||+|||+|.++..+++.|..+|+++|+|+.+++.++++...... ++++.++|+.+.. +++||+|++...+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~~fD~i~~~~~~ 135 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV---DGKFDLIVANILA 135 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC---CSCEEEEEEESCH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC---CCCceEEEECCcH
Confidence 36789999999999999999988777899999999999999888754443 4999999997743 5899999998766
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++ ...+++++.++|+|||++++.++...
T Consensus 136 ~~----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 136 EI----------LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp HH----------HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred HH----------HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 54 35789999999999999999876644
No 109
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=139.04 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-------------------------------
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR------------------------------- 115 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~------------------------------- 115 (772)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.||+.|+++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999987 44589999999999999987753221
Q ss_pred ----------------------------CCcEEEEeeccCcc----cccCCCccEEEecccccccccCccchHHHHHHHH
Q 004133 116 ----------------------------SDMRWRVMDMTSMQ----VFMDETFDVILDKGGLDALMEPELGHKLGNQYLS 163 (772)
Q Consensus 116 ----------------------------~~v~f~~~D~~~l~----~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ 163 (772)
.+++|.++|+.+.. .+.+++||+|++..++.|+.-. .++....++|+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~-~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN-WGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH-HHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhc-CCHHHHHHHHH
Confidence 37999999998643 1467899999999999777410 00112789999
Q ss_pred HHHhccccCeEEEEEE
Q 004133 164 EVKRLLKSGGKFVCLT 179 (772)
Q Consensus 164 ei~rvLkpGG~~ii~~ 179 (772)
+++++|||||++++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999864
No 110
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.35 E-value=2.3e-12 Score=136.94 Aligned_cols=109 Identities=14% Similarity=0.052 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCCCchhHHHH----HHcC-CCe--EEEEeCCHHHHHHHHHHhccC--CCCcEE--EEeeccCcc-----c
Q 004133 67 SPPPQILVPGCGNSRLSEHL----YDAG-FHG--ITNVDFSKVVISDMLRRNVRD--RSDMRW--RVMDMTSMQ-----V 130 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L----a~~g-~~~--V~gvDiS~~~I~~a~~~~~~~--~~~v~f--~~~D~~~l~-----~ 130 (772)
.++.+|||+|||+|.++..+ ...+ ... ++++|+|+.|++.++++.... ..++.+ .++++.+++ .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999866533 3322 223 499999999999998887432 234444 455555432 1
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++++||+|++..+++++.+ ..++|++++|+|||||++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d-------~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD-------IPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC-------HHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCC-------HHHHHHHHHHHcCCCcEEEEEEecC
Confidence 45789999999999999976 5689999999999999999987654
No 111
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.35 E-value=3.2e-12 Score=135.22 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=96.0
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~ 123 (772)
|+.........+..++ .++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.|++++...+. +++|+++
T Consensus 108 f~~~~~~~~~~l~~~~-----~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 108 FSPANVKERVRMAKVA-----KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHC-----CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhC-----CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 5555445555666665 35889999999999999999998765799999999999999887754432 4899999
Q ss_pred eccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 124 DMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 124 D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
|+.++. . +++||+|++..... ...+++++.++|||||++++.++..
T Consensus 183 D~~~~~-~-~~~fD~Vi~~~p~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 183 DNRDFP-G-ENIADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CTTTCC-C-CSCEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CHHHhc-c-cCCccEEEECCchh-----------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 999987 4 78999998853311 2478899999999999999988875
No 112
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.35 E-value=6.5e-12 Score=137.94 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=90.7
Q ss_pred HHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhc-------c---CCCCcEEEEee
Q 004133 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-------R---DRSDMRWRVMD 124 (772)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~-------~---~~~~v~f~~~D 124 (772)
.+...+.. .++.+|||||||+|.++..++.. |...|+|||+|+.+++.|+++.. . ...+++|+++|
T Consensus 164 ~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 164 QMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34444443 68899999999999999999865 66679999999999998876431 1 12579999999
Q ss_pred ccCcccccC--CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 125 MTSMQVFMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 125 ~~~l~~~~~--~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+.+++ +.+ ..||+|+++.+++. ++ ....|.+++|+|||||+|++.....+
T Consensus 241 ~~~lp-~~d~~~~aDVVf~Nn~~F~---pd-----l~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 241 FLSEE-WRERIANTSVIFVNNFAFG---PE-----VDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp TTSHH-HHHHHHTCSEEEECCTTCC---HH-----HHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccCCc-cccccCCccEEEEcccccC---ch-----HHHHHHHHHHcCCCCcEEEEeecccC
Confidence 99988 654 57999999876532 22 57888999999999999998865444
No 113
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=3.4e-12 Score=134.66 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=98.5
Q ss_pred HHHHHHHHHhcCCCCccccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCch----hHHHHHHc-C----CCeEEEEe
Q 004133 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSR----LSEHLYDA-G----FHGITNVD 98 (772)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~----ls~~La~~-g----~~~V~gvD 98 (772)
.+.|+.++..-. -..-+||.+...+...-...+.. .+..+|||+|||||. ++..|++. + ..+|+|+|
T Consensus 69 ~~e~~~l~~~lt-~~~t~FfRd~~~f~~l~~~llp~---~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atD 144 (274)
T 1af7_A 69 SAEWQAFINALT-TNLTAFFREAHHFPILAEHARRR---HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASD 144 (274)
T ss_dssp CTHHHHHHHHHC-CCCCCTTTTTTHHHHHHHHHHHS---CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEE
T ss_pred HHHHHHHHHHHh-hcCccccCChHHHHHHHHHccCC---CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEE
Confidence 345666555431 12223555444443332233432 135799999999998 55556654 3 12799999
Q ss_pred CCHHHHHHHHHHhcc-----------------------C---------CCCcEEEEeeccCccccc-CCCccEEEecccc
Q 004133 99 FSKVVISDMLRRNVR-----------------------D---------RSDMRWRVMDMTSMQVFM-DETFDVILDKGGL 145 (772)
Q Consensus 99 iS~~~I~~a~~~~~~-----------------------~---------~~~v~f~~~D~~~l~~~~-~~sfDvVi~~~~l 145 (772)
+|+.||+.|++..-. . ..++.|.++|+.+.+ ++ .+.||+|++.+++
T Consensus 145 is~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~-~~~~~~fDlI~crnvl 223 (274)
T 1af7_A 145 IDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQ-YNVPGPFDAIFCRNVM 223 (274)
T ss_dssp SCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSS-CCCCCCEEEEEECSSG
T ss_pred CCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCC-CCcCCCeeEEEECCch
Confidence 999999999875310 0 026899999999976 65 5789999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
.|+.++. ..+++++++++|+|||++++.
T Consensus 224 iyf~~~~-----~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 224 IYFDKTT-----QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp GGSCHHH-----HHHHHHHHGGGEEEEEEEEEC
T ss_pred HhCCHHH-----HHHHHHHHHHHhCCCcEEEEE
Confidence 9985532 689999999999999999873
No 114
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=2.6e-12 Score=129.17 Aligned_cols=124 Identities=12% Similarity=0.071 Sum_probs=93.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEEeeccCcc-cccCCC-ccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQ-VFMDET-FDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~---~~v~f~~~D~~~l~-~~~~~s-fDvVi~~ 142 (772)
++.+|||+|||+|.++..++..|..+|+++|+|+.|++.|++++...+ .+++++++|+.++. .+.+++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 468999999999999999888877789999999999999988876554 47999999998864 123678 9999987
Q ss_pred ccccccccCccchHHHHHHHHHH--HhccccCeEEEEEEcCchhhhhcccccccCCcEEEEEEcC
Q 004133 143 GGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 205 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei--~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~ 205 (772)
..++ . .. ...+++.+ .++|+|||++++.+.... +.....+|.+.....+
T Consensus 133 ~~~~-~--~~-----~~~~l~~~~~~~~LkpgG~l~i~~~~~~------~~~~~~~~~~~~~~~y 183 (201)
T 2ift_A 133 PPFH-F--NL-----AEQAISLLCENNWLKPNALIYVETEKDK------PLITPENWTLLKEKTT 183 (201)
T ss_dssp CCSS-S--CH-----HHHHHHHHHHTTCEEEEEEEEEEEESSS------CCCCCTTEEEEEEEEE
T ss_pred CCCC-C--cc-----HHHHHHHHHhcCccCCCcEEEEEECCCC------CccccchhHHHHHHhc
Confidence 7743 1 11 56788888 778999999998876543 1122345765544433
No 115
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.34 E-value=7.1e-12 Score=123.29 Aligned_cols=120 Identities=19% Similarity=0.213 Sum_probs=97.2
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CC--cEEEEeeccCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSM 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~--v~f~~~D~~~l 128 (772)
.....+...+.. .++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++..... .+ +++.++|+.+.
T Consensus 39 ~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 39 KGTKILVENVVV---DKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred hHHHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 455556666654 578899999999999999999884 479999999999999988875443 33 99999999884
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++++||+|++...+++... ....+++++.++|+|||++++.+....
T Consensus 115 --~~~~~~D~v~~~~~~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 115 --VKDRKYNKIITNPPIRAGKE------VLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp --CTTSCEEEEEECCCSTTCHH------HHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred --cccCCceEEEECCCcccchh------HHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 46789999999887765211 267899999999999999999987754
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=7.1e-12 Score=128.45 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=85.0
Q ss_pred hcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccC----cccccCCC
Q 004133 61 IGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS----MQVFMDET 135 (772)
Q Consensus 61 l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~----l~~~~~~s 135 (772)
+......++.+|||+|||+|.++..+++. |..+|+|+|+|+.+++.+++++... .++.++++|+.+ ++ +. ++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~-~~-~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYAN-IV-EK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTT-TS-CC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccc-cC-cc
Confidence 43333357889999999999999999987 5468999999999999998876443 789999999998 66 55 78
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
||+|+. .+..+. ....+++++.++|||||++++.
T Consensus 144 ~D~v~~-----~~~~~~----~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYE-----DVAQPN----QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEE-----CCCSTT----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEE-----ecCChh----HHHHHHHHHHHhCCCCcEEEEE
Confidence 999982 222221 2467899999999999999986
No 117
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.34 E-value=2e-11 Score=125.21 Aligned_cols=125 Identities=18% Similarity=0.280 Sum_probs=92.1
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~ 123 (772)
|..........+...+......++.+|||+|||+|.++..+++. | ..+|+|+|+|+.+++.+.+.+... .++++.++
T Consensus 55 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~ 133 (233)
T 2ipx_A 55 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIE 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECS
T ss_pred ecccchhHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEc
Confidence 44333344434444344333467889999999999999999987 3 357999999999988887766443 68999999
Q ss_pred eccC---cccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 124 DMTS---MQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 124 D~~~---l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
|+.+ ++ +.+++||+|++... .++ ....++.++.++|||||++++....
T Consensus 134 d~~~~~~~~-~~~~~~D~V~~~~~-----~~~----~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 134 DARHPHKYR-MLIAMVDVIFADVA-----QPD----QTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp CTTCGGGGG-GGCCCEEEEEECCC-----CTT----HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccCChhhhc-ccCCcEEEEEEcCC-----Ccc----HHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 9988 44 56789999998543 111 1456789999999999999985443
No 118
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.33 E-value=4.3e-12 Score=129.63 Aligned_cols=91 Identities=13% Similarity=0.207 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeec-cCccccc-CCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM-TSMQVFM-DETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~-~~l~~~~-~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++ .++++|+++|+ ..++ ++ +++||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~-~~~~~~fD~v~~~~- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN----APHADVYEWNGKGELP-AGLGAPFGLIVSRR- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCC-TTCCCCEEEEEEES-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh----CCCceEEEcchhhccC-CcCCCCEEEEEeCC-
Confidence 3678999999999999999999876 799999999999999776 45799999999 5677 77 89999999861
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
+ ...+++++.++|||||+++
T Consensus 120 -----~-------~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 -----G-------PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----C-------CSGGGGGHHHHEEEEEEEE
T ss_pred -----C-------HHHHHHHHHHHcCCCcEEE
Confidence 2 2478899999999999999
No 119
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.33 E-value=1.9e-13 Score=140.83 Aligned_cols=141 Identities=9% Similarity=0.099 Sum_probs=102.5
Q ss_pred CCHHHHHHHHHhcCCC-Ccc-----ccccc-hhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEe
Q 004133 26 TSKENWDKFFTIRGIG-DSF-----EWYAE-WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVD 98 (772)
Q Consensus 26 ~~~~yWd~~y~~~~~~-~~~-----eW~~~-~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvD 98 (772)
....||+..+.....- ..+ .|+.. ...+...+...+... .++.+|||+|||+|.++..+++.| .+|+|+|
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD 107 (241)
T 3gdh_A 31 ELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQS--FKCDVVVDAFCGVGGNTIQFALTG-MRVIAID 107 (241)
T ss_dssp GGHHHHHTHHHHCTTGGGTCCCCHHHHHHCCCHHHHHHHHHHHHHH--SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEE
T ss_pred HHHHHHHhhhhhHhhccCCceecccceeecCHHHHHHHHHHHhhhc--cCCCEEEECccccCHHHHHHHHcC-CEEEEEE
Confidence 4578999887655210 011 13222 122233444333210 267899999999999999999987 5799999
Q ss_pred CCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 99 FSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 99 iS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
+|+.+++.+++++...+ .+++|+++|+.+++ ++++||+|++...+++.... ...+.+++++|+|||+++
T Consensus 108 ~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~~~~~-------~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 108 IDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGGPDYA-------TAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSSGGGG-------GSSSBCTTTSCSSCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCCcchh-------hhHHHHHHhhcCCcceeH
Confidence 99999999988876555 37999999999986 56899999999988886553 236678999999999965
Q ss_pred EE
Q 004133 177 CL 178 (772)
Q Consensus 177 i~ 178 (772)
+.
T Consensus 179 ~~ 180 (241)
T 3gdh_A 179 FR 180 (241)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 120
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.33 E-value=4.5e-12 Score=125.27 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=103.9
Q ss_pred cchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecc
Q 004133 48 AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (772)
Q Consensus 48 ~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~ 126 (772)
..++.+...+..++. +..+|||+|||+|.++..++.. +..+|+++|+|+.|++.+++++...+...++...|..
T Consensus 34 p~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp GGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred HhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 334455555666663 5789999999999999999776 3348999999999999999988766655455557776
Q ss_pred CcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE---cCchh--hhh---cccccc--cCC
Q 004133 127 SMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT---LAESH--VLG---LLFPKF--RFG 196 (772)
Q Consensus 127 ~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~---~~~~~--~~~---~l~~~~--~~~ 196 (772)
... +.++||+|+...++|++ ++ .+..+..+++.|+|||.||-.. ++.+. +.. ..++.. ...
T Consensus 109 ~~~--~~~~~DvVLa~k~LHlL-~~------~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~ 179 (200)
T 3fzg_A 109 SDV--YKGTYDVVFLLKMLPVL-KQ------QDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWI 179 (200)
T ss_dssp HHH--TTSEEEEEEEETCHHHH-HH------TTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTS
T ss_pred ccC--CCCCcChhhHhhHHHhh-hh------hHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcc
Confidence 543 67899999999999999 43 2456669999999999998765 22221 111 222222 236
Q ss_pred cEEEEEEcCC
Q 004133 197 WKMSVHAIPQ 206 (772)
Q Consensus 197 w~~~~~~~~~ 206 (772)
|.+.-.++.+
T Consensus 180 ~~~~~~~~~n 189 (200)
T 3fzg_A 180 KILDSKVIGN 189 (200)
T ss_dssp CEEEEEEETT
T ss_pred eeeeeeeeCc
Confidence 7777777655
No 121
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.32 E-value=3.7e-12 Score=129.00 Aligned_cols=109 Identities=17% Similarity=0.265 Sum_probs=91.6
Q ss_pred HHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccC--cccccC
Q 004133 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS--MQVFMD 133 (772)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~--l~~~~~ 133 (772)
.+.+.+. .++.+|||+|||+|.++..++..| .+++++|+|+.+++.++++. .++.++|+.+ .+ +++
T Consensus 24 ~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~-~~~ 91 (230)
T 3cc8_A 24 NLLKHIK----KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMP-YEE 91 (230)
T ss_dssp HHHTTCC----TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCC-SCT
T ss_pred HHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCC-CCC
Confidence 3445543 367899999999999999999887 58999999999999886554 3789999987 55 778
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++||+|++..+++++.+ ...+++++.++|+|||++++.+....
T Consensus 92 ~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 92 EQFDCVIFGDVLEHLFD-------PWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp TCEEEEEEESCGGGSSC-------HHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred CccCEEEECChhhhcCC-------HHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 89999999999999865 46899999999999999999876543
No 122
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.32 E-value=5.9e-12 Score=147.50 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=96.9
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC--CeEEEEeCCHHHHHHHHHHhcc-------CCCCcEEEEee
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMD 124 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~--~~V~gvDiS~~~I~~a~~~~~~-------~~~~v~f~~~D 124 (772)
...+..++.. .++.+|||+|||+|.++..|++.+. .+|+|+|+|+.|++.|+++... ..++++|+++|
T Consensus 710 le~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 710 VEYALKHIRE---SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHH---SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHhcc---cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 3344555543 4678999999999999999999862 5799999999999999875431 23479999999
Q ss_pred ccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 125 MTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 125 ~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+.+++ +.+++||+|++..+++|+.++. ...+++++.++|||| .+++.+..
T Consensus 787 a~dLp-~~d~sFDlVV~~eVLeHL~dp~-----l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 787 ILEFD-SRLHDVDIGTCLEVIEHMEEDQ-----ACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TTSCC-TTSCSCCEEEEESCGGGSCHHH-----HHHHHHHHHHTTCCS-EEEEEECB
T ss_pred hHhCC-cccCCeeEEEEeCchhhCChHH-----HHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999 8889999999999999997643 567999999999999 76666654
No 123
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.31 E-value=3.5e-11 Score=131.59 Aligned_cols=160 Identities=17% Similarity=0.158 Sum_probs=114.8
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC--CCeEEEEeCCHHHHHHHHHHhccCCC-CcEEEEeeccCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDRS-DMRWRVMDMTSM 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g--~~~V~gvDiS~~~I~~a~~~~~~~~~-~v~f~~~D~~~l 128 (772)
.+...+...... .++.+|||+|||+|.++..++..+ ...|+|+|+++.+++.|++++...+. +++|.++|+.++
T Consensus 190 ~la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 190 VLAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp HHHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred HHHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 344555555554 577899999999999999999864 24699999999999999888755443 799999999999
Q ss_pred ccccCCCccEEEecccccccccCc-cchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccccCCcEEEEEEcCCC
Q 004133 129 QVFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQK 207 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~-~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~~~ 207 (772)
+ .+.+.||+|+++..+.....+. ........+++++.++|||||++++++.....+ +.+.. .+|...-.....
T Consensus 267 ~-~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~-~~~~~---~g~~~~~~~~l~- 340 (354)
T 3tma_A 267 P-RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL-KRALP---PGFALRHARVVE- 340 (354)
T ss_dssp G-GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH-HHHCC---TTEEEEEEEECC-
T ss_pred c-cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH-HHHhh---cCcEEEEEEEEE-
Confidence 8 7778899999977665433211 112235789999999999999999998764333 33333 456554433221
Q ss_pred CCCCCCcceEEEEEEe
Q 004133 208 SSSEPSLQTFMVVADK 223 (772)
Q Consensus 208 ~~~~~~l~~f~~~~~K 223 (772)
...+..++++++|
T Consensus 341 ---~g~l~~~i~vl~r 353 (354)
T 3tma_A 341 ---QGGVYPRVFVLEK 353 (354)
T ss_dssp ---BTTBCCEEEEEEE
T ss_pred ---eCCEEEEEEEEEc
Confidence 2346777888776
No 124
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.30 E-value=8.1e-12 Score=122.12 Aligned_cols=122 Identities=13% Similarity=0.147 Sum_probs=92.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC-c
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS-M 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~-l 128 (772)
.+...+...+.. ..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++....+ .+++++++|+.+ +
T Consensus 17 ~~~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 17 KVRGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp -CHHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 344455555542 14678999999999999999998876789999999999999988875543 358999999988 3
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHH--hccccCeEEEEEEcCchh
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~--rvLkpGG~~ii~~~~~~~ 184 (772)
+ ..++.||+|++...+... . ....++.+. ++|+|||++++.......
T Consensus 95 ~-~~~~~fD~i~~~~~~~~~-~-------~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 D-CLTGRFDLVFLDPPYAKE-T-------IVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp H-HBCSCEEEEEECCSSHHH-H-------HHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred H-hhcCCCCEEEECCCCCcc-h-------HHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 4 445789999987665321 1 356666776 999999999998765443
No 125
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.30 E-value=1e-11 Score=125.34 Aligned_cols=127 Identities=21% Similarity=0.356 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..++ .+|+|+|+|+. ++++.++|+.+++ +++++||+|++..+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVP-LEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCS-CCTTCEEEEEEESCCC
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCC-CCCCCEeEEEEehhcc
Confidence 367899999999999998773 36999999995 5789999999998 8889999999999996
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh-hhcccccc-cCCcEEEEEEcCCCCCCCCCcceEEEEEEec
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV-LGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKE 224 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~-~~~l~~~~-~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~ 224 (772)
+ .+ ...+++++.++|+|||++++.++..... ...+...+ ..+|.+....... -..++++++|.
T Consensus 127 ~-~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-------~~~~~~~~~k~ 191 (215)
T 2zfu_A 127 G-TN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTN-------SHFFLFDFQKT 191 (215)
T ss_dssp S-SC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCS-------TTCEEEEEEEC
T ss_pred c-cC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCC-------CeEEEEEEEec
Confidence 3 22 5799999999999999999988764321 12222222 2366655433221 23466777776
Q ss_pred CCc
Q 004133 225 NSS 227 (772)
Q Consensus 225 ~~~ 227 (772)
...
T Consensus 192 ~~~ 194 (215)
T 2zfu_A 192 GPP 194 (215)
T ss_dssp SSC
T ss_pred Ccc
Confidence 443
No 126
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=7.3e-12 Score=138.42 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=94.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++......+++|+++|+.+.. .++++||+|+++..+++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~-~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL-TEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-CTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-ccCCCeEEEEECCchhh
Confidence 578999999999999999999876 7999999999999999888766667999999999987 66789999999988876
Q ss_pred cccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 148 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 148 l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
.... .......+++++.++|||||+++++.....
T Consensus 311 ~~~~--~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 311 GGAV--ILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp TCSS--CCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cccc--cHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 3221 112367999999999999999999875543
No 127
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.30 E-value=7.3e-12 Score=138.28 Aligned_cols=105 Identities=16% Similarity=0.089 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++.|..+|+|+|+| .|++.++++....+ .+++++++|+.+++ ++ ++||+|++..+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS-LP-EKVDVIISEWM 138 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CS-SCEEEEEECCC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-cC-CcceEEEEcCh
Confidence 5788999999999999999999988789999999 99999988775544 35999999999998 66 89999999776
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
.+++..... ...+++.+.++|||||++++.
T Consensus 139 ~~~l~~e~~----~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 GYFLLRESM----FDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTBTTTCT----HHHHHHHHHHHEEEEEEEESS
T ss_pred hhcccchHH----HHHHHHHHHhhCCCCeEEEEe
Confidence 666543222 678999999999999999764
No 128
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.30 E-value=1.1e-11 Score=129.72 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CC-CeEEEEeCCHH------HHHHHHHHhccCC--CCcEEEEee---ccCcccccC
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKV------VISDMLRRNVRDR--SDMRWRVMD---MTSMQVFMD 133 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~-~~V~gvDiS~~------~I~~a~~~~~~~~--~~v~f~~~D---~~~l~~~~~ 133 (772)
.++.+|||+|||+|.++..+++. |. .+|+|+|+|+. +++.++++..... .++++.++| ...++ +++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~ 120 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-IAD 120 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-GTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-CCC
Confidence 57889999999999999999987 43 57999999997 9999988875443 479999998 55666 788
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++||+|++.++++++.++ ..+++.+.++++|||++++.++..
T Consensus 121 ~~fD~v~~~~~l~~~~~~-------~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFASA-------NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCCSEEEEESCGGGSSCH-------HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCEEEEEEccchhhCCCH-------HHHHHHHHHHhCCCCEEEEEEecC
Confidence 999999999999998763 357777777778899999988764
No 129
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.30 E-value=8e-12 Score=130.71 Aligned_cols=100 Identities=24% Similarity=0.346 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++. +++.|.++|+.+++ +++++||+|++..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLP-FSDTSMDAIIRIYAP- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCS-BCTTCEEEEEEESCC-
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCC-CCCCceeEEEEeCCh-
Confidence 6789999999999999999987 2347999999999999997664 57899999999998 888999999985441
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhh
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~ 186 (772)
..++++.++|||||++++.+....+..
T Consensus 159 -------------~~l~~~~~~L~pgG~l~~~~~~~~~~~ 185 (269)
T 1p91_A 159 -------------CKAEELARVVKPGGWVITATPGPRHLM 185 (269)
T ss_dssp -------------CCHHHHHHHEEEEEEEEEEEECTTTTH
T ss_pred -------------hhHHHHHHhcCCCcEEEEEEcCHHHHH
Confidence 257899999999999999988766543
No 130
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.29 E-value=9.3e-12 Score=128.51 Aligned_cols=114 Identities=13% Similarity=0.066 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhc-------cCCCCcEEEEeeccC-cc-cccCCCcc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-------RDRSDMRWRVMDMTS-MQ-VFMDETFD 137 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~-------~~~~~v~f~~~D~~~-l~-~~~~~sfD 137 (772)
++.+|||||||+|.++..|+.. +..+|+|+|+|+.|++.|+++.. ....++.++++|+.+ ++ .+++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5679999999999999999987 34579999999999999987643 134589999999987 43 25688999
Q ss_pred EEEecccccccccCccchH--HHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 138 VILDKGGLDALMEPELGHK--LGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 138 vVi~~~~l~~l~~~~~~~~--~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
.|+....-.+..... ... ....+++++.++|||||++++.+-..
T Consensus 126 ~v~~~~~dp~~k~~h-~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTK-HKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp EEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred EEEEeCCCchhhhhh-hhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 998644322211100 000 01479999999999999999987654
No 131
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.28 E-value=3e-11 Score=127.63 Aligned_cols=109 Identities=15% Similarity=0.079 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCC---chhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc----------cccC
Q 004133 68 PPPQILVPGCGN---SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ----------VFMD 133 (772)
Q Consensus 68 ~~~~ILDlGCG~---G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~----------~~~~ 133 (772)
+..+|||||||+ |.++..+... ...+|+++|+|+.|++.+++++. ...+++|+++|+.+.. .++.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-KDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-TCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-CCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 457999999999 9888766654 23479999999999999988873 3467999999998742 1333
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++||+|++.++|+++.+.+ ...+|++++++|+|||++++.++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~~-----~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDV-----VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTT-----HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHH-----HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5899999999999997753 6799999999999999999998764
No 132
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.28 E-value=6.9e-12 Score=127.96 Aligned_cols=117 Identities=15% Similarity=0.069 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCc-c-cccCCCccEEEecc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM-Q-VFMDETFDVILDKG 143 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l-~-~~~~~sfDvVi~~~ 143 (772)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|+++....+ .++.|+++|+.++ + .+++++||.|+...
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 57899999999999999999873 3579999999999999988875443 4799999999885 2 16789999999764
Q ss_pred cccccccCccch-HHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 144 GLDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 144 ~l~~l~~~~~~~-~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
...+........ .....+++++.++|||||++++.+-....
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~ 155 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPY 155 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 433322111000 00135999999999999999999865443
No 133
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.28 E-value=2.9e-11 Score=122.32 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=87.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cccCCCccEEEeccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VFMDETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~~~~sfDvVi~~~~ 144 (772)
++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|+++....+ .+++++++|+.+++ .+++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57899999999999999999873 3579999999999999988775433 58999999999865 246789999998754
Q ss_pred ccccccCccc-hHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 145 LDALMEPELG-HKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 145 l~~l~~~~~~-~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
..+....... ......+++++.++|+|||++++.+-.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3322110000 001357999999999999999998744
No 134
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=2.1e-11 Score=119.19 Aligned_cols=102 Identities=14% Similarity=0.163 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~ 147 (772)
++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..++++.++|+.+ + +++++||+|+++..++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~-~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLC-S-INQESVDVVVFNPPYVP 90 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTT-T-BCGGGCSEEEECCCCBT
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhh-h-cccCCCCEEEECCCCcc
Confidence 56799999999999999999987 79999999999975 3578999999988 5 57799999999888776
Q ss_pred cccCc--cchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 148 LMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 148 l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
..+.. ........+++++.+.| |||+++++....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 44320 00000246788888888 999999887554
No 135
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.27 E-value=1.1e-11 Score=135.35 Aligned_cols=114 Identities=17% Similarity=0.130 Sum_probs=92.4
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccc
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVF 131 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~ 131 (772)
...+...+.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.++++....+ .+++++++|+.+++ +
T Consensus 39 ~~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 113 (348)
T 2y1w_A 39 QRAILQNHTD---FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-L 113 (348)
T ss_dssp HHHHHHTGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-C
T ss_pred HHHHHhcccc---CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-C
Confidence 3344444433 46789999999999999999998877899999997 8888887765443 47999999999987 5
Q ss_pred cCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 132 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 132 ~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
+ ++||+|++..+++++..+. ....+.++.++|||||++++.
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred C-CceeEEEEeCchhcCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 5 6899999998888776543 567888999999999999843
No 136
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.27 E-value=5.6e-11 Score=119.01 Aligned_cols=100 Identities=13% Similarity=0.051 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..++.. +..+++++|+|+.+++.++++....+ .++++.++|+.+++ +.++||+|++...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVISRAF- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEECSCS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEEecc-
Confidence 4689999999999999999886 34579999999999999988765443 35999999999876 5678999997542
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
.+ ...+++++.++|+|||++++..-
T Consensus 142 ---~~-------~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---AS-------LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SS-------HHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CC-------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 11 56899999999999999998753
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.27 E-value=1.2e-11 Score=124.77 Aligned_cols=139 Identities=13% Similarity=0.011 Sum_probs=100.5
Q ss_pred CCCHHHHHHHHHhcCCCCcccccc--chhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-C-CeEEEEeCC
Q 004133 25 FTSKENWDKFFTIRGIGDSFEWYA--EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-F-HGITNVDFS 100 (772)
Q Consensus 25 f~~~~yWd~~y~~~~~~~~~eW~~--~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~-~~V~gvDiS 100 (772)
|....+|+..|.... ..+.+.. ..+.+...+...+.. .++.+|||+|||+|.++..++..+ . .+|+++|+|
T Consensus 37 ~~~~~~~~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~ 111 (215)
T 2yxe_A 37 FLPEHLKEYAYVDTP--LEIGYGQTISAIHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI 111 (215)
T ss_dssp GSCGGGGGGTTSCSC--EEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC
T ss_pred cCCchhhhhcccCCC--ccCCCCcEeCcHHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC
Confidence 445566766665431 1111111 123445556666654 578899999999999999998874 2 579999999
Q ss_pred HHHHHHHHHHhccC-CCCcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 101 KVVISDMLRRNVRD-RSDMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 101 ~~~I~~a~~~~~~~-~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+.+++.++++.... ..++++.++|+.... ..+++||+|++..+++++. +++.++|||||++++..
T Consensus 112 ~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 112 PELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYTTAAGPKIP-------------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEECCchHHHH-------------HHHHHHcCCCcEEEEEE
Confidence 99999998876433 246999999986543 2367899999999988763 37899999999999887
Q ss_pred cCc
Q 004133 180 LAE 182 (772)
Q Consensus 180 ~~~ 182 (772)
...
T Consensus 178 ~~~ 180 (215)
T 2yxe_A 178 GRY 180 (215)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 138
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.27 E-value=1e-11 Score=124.89 Aligned_cols=106 Identities=10% Similarity=0.050 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccC-cccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-MQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~-l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..++..|..+|+++|+|+.|++.++++....+ .+++++++|+.+ ++ ..+++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA-QKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS-SCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh-hcCCCCCEEEECCCC
Confidence 468999999999999999888887789999999999999988875544 479999999988 45 566799999987664
Q ss_pred cccccCccchHHHHHHHHHHHh--ccccCeEEEEEEcCc
Q 004133 146 DALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLAE 182 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~r--vLkpGG~~ii~~~~~ 182 (772)
+ .. . ...+++.+.+ +|+|||++++.....
T Consensus 133 ~-~~--~-----~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 R-RG--L-----LEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-TT--T-----HHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-CC--c-----HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3 11 1 4567777765 699999999877553
No 139
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.27 E-value=1.3e-11 Score=127.40 Aligned_cols=100 Identities=16% Similarity=0.083 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCccccc---CCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFM---DETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~---~~sfDvVi~~ 142 (772)
++.+|||+|||+|.++..++.. +..+|+++|+|+.|++.++++....+ .+++++++|+.+++ +. +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG-QRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHT-TCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhc-ccccccCCccEEEEe
Confidence 5689999999999999999864 33479999999999999988765433 36999999999877 54 6899999986
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
.+ .+ ...+++++.++|||||++++..
T Consensus 149 ~~----~~-------~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 AV----AR-------LSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp CC----SC-------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc----CC-------HHHHHHHHHHhcCCCCEEEEEe
Confidence 62 22 5789999999999999998874
No 140
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.26 E-value=2.2e-12 Score=144.15 Aligned_cols=105 Identities=18% Similarity=0.205 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++.. ......|...++.+++ +++++||+|++.++++
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~-~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGI-RVRTDFFEKATADDVR-RTEGPANVIYAANTLC 182 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHH-HHHCCEEEEEEESCGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCC-CcceeeechhhHhhcc-cCCCCEEEEEECChHH
Confidence 5788999999999999999999887 79999999999998876521 1111223445666677 7789999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
|+.+ ...++++++++|||||++++.+..
T Consensus 183 h~~d-------~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 183 HIPY-------VQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp GCTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCC-------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9975 579999999999999999987654
No 141
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.26 E-value=4.5e-11 Score=124.79 Aligned_cols=121 Identities=15% Similarity=0.069 Sum_probs=91.2
Q ss_pred HHHHhhcCCCCC-CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcc-cc
Q 004133 56 PLISLIGAPTSS-PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ-VF 131 (772)
Q Consensus 56 ~l~~~l~~~~~~-~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~-~~ 131 (772)
++..++.. . ++.+|||+|||+|.++..++..+..+|+|+|+++.+++.|+++...... +++++++|+.++. .+
T Consensus 39 ll~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYL---PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCC---CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcC---CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh
Confidence 34555543 5 6889999999999999999998665899999999999999888754433 5999999999875 24
Q ss_pred cCCCccEEEeccccccc-----ccCcc--------chHHHHHHHHHHHhccccCeEEEEEE
Q 004133 132 MDETFDVILDKGGLDAL-----MEPEL--------GHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 132 ~~~sfDvVi~~~~l~~l-----~~~~~--------~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
++++||+|+++..+... .++.. .......+++.+.++|||||+++++.
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 47899999997665433 11100 01125689999999999999999875
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.25 E-value=1.4e-11 Score=120.97 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=93.3
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l 128 (772)
..+...+..++... .++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++..... .+++++++|+.+.
T Consensus 29 ~~~~~~~~~~l~~~--~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 29 DKVKESIFNMIGPY--FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp HHHHHHHHHHHCSC--CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhh--cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 34555566666321 3678999999999999999888876789999999999999988775443 3699999999874
Q ss_pred c-c--ccCCCccEEEecccccccccCccchHHHHHHHHHH--HhccccCeEEEEEEcCchh
Q 004133 129 Q-V--FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 129 ~-~--~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei--~rvLkpGG~~ii~~~~~~~ 184 (772)
. . +.+++||+|++...+.. .. ....++.+ .++|+|||++++.+.....
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~-~~-------~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAK-QE-------IVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGG-CC-------HHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHhcCCCCCEEEECCCCCc-hh-------HHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 3 0 22689999998876441 11 34566666 8999999999988765443
No 143
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.25 E-value=1.8e-11 Score=124.24 Aligned_cols=115 Identities=11% Similarity=0.114 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cccCCCccEEEeccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VFMDETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~~~~sfDvVi~~~~ 144 (772)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++....+ .+++++++|+.+++ .+++++||.|+....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5689999999999999999987 33579999999999999988775443 47999999999864 256789999986543
Q ss_pred ccccccCccch-HHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 145 LDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 145 l~~l~~~~~~~-~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
..+........ .....+++++.++|||||++++.+-..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 32221100000 002579999999999999999987543
No 144
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=2.1e-11 Score=132.10 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.|+++....+ .+++++++|+.+++ +++++||+|++..+.
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMG 115 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCB
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCch
Confidence 578999999999999999999887789999999 59999988765443 36999999999998 788899999998766
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
+.+..... ...++.++.++|||||+++
T Consensus 116 ~~l~~~~~----~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESM----MDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCC----HHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHH----HHHHHHHHHhhcCCCeEEE
Confidence 65543322 5789999999999999987
No 145
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=5.7e-12 Score=121.85 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCc-cccc--CCCccEEEeccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-QVFM--DETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l-~~~~--~~sfDvVi~~~~ 144 (772)
++.+|||+|||+|.++..++..+.. |+|+|+|+.+++.++++......++++.++|+.+. +.++ .++||+|++...
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 5689999999999999999998875 99999999999999887754444899999999874 2122 248999999877
Q ss_pred ccccccCccchHHHHHHHHHHH--hccccCeEEEEEEcCchh
Q 004133 145 LDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~--rvLkpGG~~ii~~~~~~~ 184 (772)
++ .. ...+++.+. ++|+|||++++.+.....
T Consensus 120 ~~--~~-------~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 120 YA--MD-------LAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp TT--SC-------TTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred Cc--hh-------HHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 65 22 234556666 999999999988766544
No 146
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.24 E-value=6.2e-11 Score=120.78 Aligned_cols=123 Identities=18% Similarity=0.256 Sum_probs=91.7
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~ 123 (772)
|......+...+...+......++.+|||+|||+|.++..+++. | ..+|+++|+|+.+++.+++++... .++++.++
T Consensus 51 ~~p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~ 129 (227)
T 1g8a_A 51 WNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILG 129 (227)
T ss_dssp CCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEEC
T ss_pred eCCCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEc
Confidence 55555555555544454333357889999999999999999987 4 257999999999999998877543 78999999
Q ss_pred eccCccc--ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 124 DMTSMQV--FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 124 D~~~l~~--~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
|+.+... ...++||+|++... .+. ....++.++.++|||||++++.
T Consensus 130 d~~~~~~~~~~~~~~D~v~~~~~-----~~~----~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 130 DATKPEEYRALVPKVDVIFEDVA-----QPT----QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC-----STT----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcchhhcccCCceEEEECCC-----CHh----HHHHHHHHHHHhcCCCCEEEEE
Confidence 9988420 12468999996543 111 1345699999999999999987
No 147
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.23 E-value=2.8e-11 Score=133.55 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=95.3
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC----CCcEEEEeeccC
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTS 127 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~----~~v~f~~~D~~~ 127 (772)
....+...+.. .++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.+++++...+ .+++|.++|+.+
T Consensus 210 ~~~~ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 210 GARFFMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp HHHHHHHTCCC---SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred HHHHHHHhCcc---cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 34456666654 456899999999999999999984 4579999999999999988775433 258899999998
Q ss_pred cccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh
Q 004133 128 MQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 185 (772)
Q Consensus 128 l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~ 185 (772)
. +++++||+|+++..+++..... ......+++++.++|||||+++++.......
T Consensus 287 -~-~~~~~fD~Ii~nppfh~~~~~~--~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 287 -G-VEPFRFNAVLCNPPFHQQHALT--DNVAWEMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp -T-CCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred -c-CCCCCeeEEEECCCcccCcccC--HHHHHHHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 4 6788999999998887532211 1125579999999999999999987554433
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.23 E-value=3.1e-11 Score=125.68 Aligned_cols=101 Identities=14% Similarity=0.007 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCccccc---CCCccEEEe
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFM---DETFDVILD 141 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~---~~sfDvVi~ 141 (772)
.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++....+ .+++++++|+.+++ .. +++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~-~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLA-REAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHT-TSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhh-cccccCCCceEEEE
Confidence 45789999999999999999876 44579999999999999988775443 36999999999876 43 479999998
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
..+. + ...+++.+.++|||||+|++..
T Consensus 158 ~a~~----~-------~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 158 RAVA----P-------LCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESSC----C-------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcC----C-------HHHHHHHHHHHcCCCeEEEEEe
Confidence 6532 2 5689999999999999999876
No 149
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=5e-11 Score=128.73 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
++.+|||+|||+|.++..+++. +..+++++|+| .+++.++++....+ .+++|.++|+.+.+ ++++ ||+|++..+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-YGND-YDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-CCSC-EEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-CCCC-CcEEEEcch
Confidence 5789999999999999999887 23479999999 99999988764432 35999999999877 6554 999999999
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++++.+++ ..+++++++++|+|||++++.++..
T Consensus 242 l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 242 LHHFDVAT-----CEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred hccCCHHH-----HHHHHHHHHHhCCCCcEEEEEeecC
Confidence 99885433 6799999999999999999987653
No 150
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.23 E-value=2.3e-11 Score=128.95 Aligned_cols=162 Identities=15% Similarity=0.104 Sum_probs=103.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
..+.+||+||+|.|.++..+....+..+|++||+||.+++.|++.+ |+ ++++++.+|+.++ .
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l----~-------- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVI----D-------- 185 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGG----G--------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhC----C--------
Confidence 5678999999998766554444556789999999999999999986 65 6899999999875 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
+..||+|+++....+ -..+++.+.+.|+|||.|+++........
T Consensus 186 -----------------------d~~FDvV~~~a~~~d-------------~~~~l~el~r~LkPGG~Lvv~~~~~~r~~ 229 (298)
T 3fpf_A 186 -----------------------GLEFDVLMVAALAEP-------------KRRVFRNIHRYVDTETRIIYRTYTGMRAI 229 (298)
T ss_dssp -----------------------GCCCSEEEECTTCSC-------------HHHHHHHHHHHCCTTCEEEEEECCGGGGG
T ss_pred -----------------------CCCcCEEEECCCccC-------------HHHHHHHHHHHcCCCcEEEEEcCcchhhh
Confidence 156999998543211 27899999999999999999875433221
Q ss_pred -HHHHHHHHHHhccceEEEeec-CCceEEEEEecCCCcCCCCcHHHHHHHHhhhcCCC
Q 004133 698 -KDMVISRMKMVFNHLFCLQLE-EDVNLVLFGLSSESCIKDNSFPEAAVQLGKLVKFQ 753 (772)
Q Consensus 698 -~~~v~~~l~~vF~~v~~~~~~-~~~N~vl~a~~~~~~~~~~~l~~~a~~l~~~~~~~ 753 (772)
...+.....+.|..+..+... +-.|.|+|+++...+--.+.+-+..++=+.+++|+
T Consensus 230 l~~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
T 3fpf_A 230 LYAPVSDDDITGFRRAGVVLPSGKVNNTSVLVFKCPDKGELNSKLEGKPIPNPLLGLD 287 (298)
T ss_dssp SSCCCCTGGGTTEEEEEEECCCTTCCCEEEEEEECC----------------------
T ss_pred ccccCChhhhhhhhheeEECCCCCcCcEEEEEEccCCchHHHHHHhcccCCcceeccc
Confidence 111112344577766665543 44899999988875322233555555555555554
No 151
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.22 E-value=3.5e-11 Score=125.53 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=87.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.|. +|+++|+|+.+++.++++....+..+++.++|+.+. +++++||+|+++...+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECCHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc--CcCCCCCEEEECCcHH
Confidence 4678999999999999999999887 899999999999999888755444489999998873 4567899999875443
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
. ...++.++.++|||||++++..+...
T Consensus 196 ~----------~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 196 L----------HAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp H----------HHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred H----------HHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 2 46899999999999999999776543
No 152
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.22 E-value=4.3e-11 Score=131.38 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=90.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc--ccccCCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM--QVFMDETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l--~~~~~~sfDvVi~~ 142 (772)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.++++..... .+++|+.+|+.+. + ++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-FP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-CC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-CC-CCcCEEEEe
Confidence 4689999999999999999886 2347999999 999999988875443 3799999999986 4 55 789999999
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.+++++.+++ ..++|++++++|||||++++.+..
T Consensus 256 ~vlh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 256 QFLDCFSEEE-----VISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp SCSTTSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred chhhhCCHHH-----HHHHHHHHHHhcCCCcEEEEEeec
Confidence 9999886543 678999999999999999998754
No 153
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.22 E-value=8.4e-11 Score=120.93 Aligned_cols=124 Identities=19% Similarity=0.227 Sum_probs=90.3
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~ 123 (772)
|......+...+...++.....++.+|||+|||+|.++..+++. | ...|+++|+|+.|++.+.+.+.. ..++.++++
T Consensus 54 w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~ 132 (232)
T 3id6_C 54 WNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLA 132 (232)
T ss_dssp CCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEEC
T ss_pred hchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEc
Confidence 43334466666766665444578999999999999999999886 3 34799999999998776555433 468999999
Q ss_pred eccCccc--ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 124 DMTSMQV--FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 124 D~~~l~~--~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
|+..... ...++||+|++.... ++ ....+...+.++|||||+|++..
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~-----~~----~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQ-----PD----QTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCC-----TT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhccccceEEEEecCCC-----hh----HHHHHHHHHHHhCCCCeEEEEEE
Confidence 9987541 124689999987543 11 13344566677999999999874
No 154
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=1.2e-10 Score=120.49 Aligned_cols=117 Identities=16% Similarity=0.204 Sum_probs=93.9
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~--~~~v~f~~~D~~~ 127 (772)
.....+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.++++.... ..++++.++|+.+
T Consensus 83 ~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 83 KDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG
T ss_pred hHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh
Confidence 333445555554 57889999999999999999987 4 458999999999999998876443 3579999999999
Q ss_pred cccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 128 MQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 128 l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
.+ +++++||+|++. ..+ ...+++++.++|+|||++++.......
T Consensus 160 ~~-~~~~~~D~v~~~-----~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~~ 203 (258)
T 2pwy_A 160 AE-LEEAAYDGVALD-----LME-------PWKVLEKAALALKPDRFLVAYLPNITQ 203 (258)
T ss_dssp CC-CCTTCEEEEEEE-----SSC-------GGGGHHHHHHHEEEEEEEEEEESCHHH
T ss_pred cC-CCCCCcCEEEEC-----CcC-------HHHHHHHHHHhCCCCCEEEEEeCCHHH
Confidence 87 788899999972 222 247899999999999999999876543
No 155
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.21 E-value=3.9e-11 Score=123.22 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=99.3
Q ss_pred CCCCHHHHHHHHHhcCCCCcccc--ccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCH
Q 004133 24 DFTSKENWDKFFTIRGIGDSFEW--YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (772)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW--~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~ 101 (772)
.|....+|+..|.... ..+.+ ....+.+...+...+.. .++.+|||+|||+|.++..+++.+..+|+++|+++
T Consensus 50 ~f~~~~~~~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~ 124 (235)
T 1jg1_A 50 LSVEDKYKKYAHIDEP--LPIPAGQTVSAPHMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIP 124 (235)
T ss_dssp GGSCGGGGGGTTSSSC--EECSTTCEECCHHHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCH
T ss_pred hhCCchhhhcCccCCC--cccCCCceeccHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH
Confidence 4555666766665431 11211 11223455566666654 57889999999999999999987425799999999
Q ss_pred HHHHHHHHHhccCC-CCcEEEEeeccCcccccCC-CccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 102 VVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDE-TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 102 ~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~-sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
.+++.++++....+ .++++.++|+ ..+ +++. .||+|++...++++. +++.++|+|||++++..
T Consensus 125 ~~~~~a~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~fD~Ii~~~~~~~~~-------------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 125 ELVEFAKRNLERAGVKNVHVILGDG-SKG-FPPKAPYDVIIVTAGAPKIP-------------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEESCG-GGC-CGGGCCEEEEEECSBBSSCC-------------HHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCc-ccC-CCCCCCccEEEECCcHHHHH-------------HHHHHhcCCCcEEEEEE
Confidence 99999988775433 4699999998 334 4444 599999988887663 36789999999999887
Q ss_pred cC
Q 004133 180 LA 181 (772)
Q Consensus 180 ~~ 181 (772)
..
T Consensus 190 ~~ 191 (235)
T 1jg1_A 190 GS 191 (235)
T ss_dssp CS
T ss_pred ec
Confidence 54
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.20 E-value=5e-11 Score=122.39 Aligned_cols=116 Identities=15% Similarity=0.103 Sum_probs=89.4
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
+.....+..++.. .++.+|||+|||+|..+..++... ..+|+++|+|+.+++.++++....+ .+++++++|+.+
T Consensus 57 ~~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 57 RLTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 3444555555543 367899999999999999999852 4579999999999999988875544 379999999988
Q ss_pred ccc-ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 128 MQV-FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 128 l~~-~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
... ..+++||+|+....... ...+++++.++|||||++++-.
T Consensus 134 ~~~~~~~~~fD~V~~~~~~~~----------~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAAKAQ----------SKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp CHHHHTTSCEEEEEEETTSSS----------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhhccCCccEEEEcCcHHH----------HHHHHHHHHHhcCCCeEEEEee
Confidence 641 12689999996543211 5789999999999999998843
No 157
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.20 E-value=2.5e-11 Score=132.27 Aligned_cols=123 Identities=18% Similarity=0.171 Sum_probs=96.8
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
.....+...+.. .++.+|||+|||+|.++..++..+. .+|+++|+|+.|++.++++........++.++|+.+.
T Consensus 183 ~~~~~ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~-- 257 (343)
T 2pjd_A 183 VGSQLLLSTLTP---HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE-- 257 (343)
T ss_dssp HHHHHHHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT--
T ss_pred HHHHHHHHhcCc---CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc--
Confidence 345556666643 3567999999999999999998863 3799999999999999988866666788899998764
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
.+++||+|+++..+++.... .......+++++.++|||||+++++....
T Consensus 258 -~~~~fD~Iv~~~~~~~g~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 -VKGRFDMIISNPPFHDGMQT--SLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp -CCSCEEEEEECCCCCSSSHH--HHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred -ccCCeeEEEECCCcccCccC--CHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 36799999999988753210 11226799999999999999999987543
No 158
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.20 E-value=2.2e-10 Score=119.84 Aligned_cols=122 Identities=16% Similarity=0.116 Sum_probs=89.3
Q ss_pred HHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhcc---CCC--CcEEEEeeccCcc-
Q 004133 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR---DRS--DMRWRVMDMTSMQ- 129 (772)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~---~~~--~v~f~~~D~~~l~- 129 (772)
+..++.. .++.+|||+|||+|.++..++... ..+|+++|+++.+++.++++... ... +++++++|+.++.
T Consensus 28 L~~~~~~---~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 28 LASLVAD---DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHTCCC---CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHhcc---cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 4455543 467899999999999999999884 35799999999999999887754 332 4899999999872
Q ss_pred -----cccCCCccEEEecccccccc---cCcc--------chHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 130 -----VFMDETFDVILDKGGLDALM---EPEL--------GHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 130 -----~~~~~sfDvVi~~~~l~~l~---~~~~--------~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.+++++||+|+++..+.... .++. .......+++.+.++|||||+++++.-.
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 14578999999985443321 0000 0001578999999999999999987643
No 159
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.19 E-value=6.1e-12 Score=126.00 Aligned_cols=125 Identities=17% Similarity=0.168 Sum_probs=74.8
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccc
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVF 131 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~ 131 (772)
+...+...+.. ..++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.++++......++++.++|+.+ + +
T Consensus 17 ~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~ 92 (215)
T 4dzr_A 17 LVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-W-L 92 (215)
T ss_dssp HHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-H-H
T ss_pred HHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-h-h
Confidence 33344444432 1367899999999999999999984 2379999999999999987775444478999999988 4 5
Q ss_pred cC-----CCccEEEeccccccccc------C-------------ccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 132 MD-----ETFDVILDKGGLDALME------P-------------ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 132 ~~-----~sfDvVi~~~~l~~l~~------~-------------~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++ ++||+|+++..+..... . ..+...+..+++++.++|||||+++++...
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 65 89999999755432211 0 001111378999999999999996555544
No 160
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.19 E-value=7.3e-11 Score=127.70 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++..... .+++|..+|+. .+ ++. .||+|++..
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-~p~-~~D~v~~~~ 243 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DP-LPA-GAGGYVLSA 243 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-CCC-SCSEEEEES
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CC-CCC-CCcEEEEeh
Confidence 34689999999999999999886 3347999999 999999988775443 57999999998 34 455 899999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++++.+++ ..+++++++++|+|||++++.+...
T Consensus 244 vlh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 244 VLHDWDDLS-----AVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp CGGGSCHHH-----HHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred hhccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeecC
Confidence 999986643 6799999999999999999987543
No 161
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.19 E-value=3.1e-10 Score=126.71 Aligned_cols=116 Identities=12% Similarity=0.014 Sum_probs=87.0
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHH-------HHHhccCC---CCcEEE
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDM-------LRRNVRDR---SDMRWR 121 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a-------~~~~~~~~---~~v~f~ 121 (772)
+...+...+.. .++.+|||+|||+|.++..++.. |...|+|+|+|+.+++.| ++++...+ .+++++
T Consensus 230 ~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 230 FLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 33444444443 57899999999999999999986 666799999999999888 66665443 579999
Q ss_pred EeeccCcc-cc--cCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 122 VMDMTSMQ-VF--MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 122 ~~D~~~l~-~~--~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
++|....+ .+ ..++||+|+++.++. .. + ...+|+++.++|||||++++..
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l~-~~--d-----~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFLF-DE--D-----LNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTTC-CH--H-----HHHHHHHHHTTCCTTCEEEESS
T ss_pred EcCccccccccccccCCCCEEEEeCccc-cc--c-----HHHHHHHHHHhCCCCeEEEEee
Confidence 98654321 02 257899999876552 11 1 5678999999999999999874
No 162
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.19 E-value=1.9e-10 Score=115.17 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=90.5
Q ss_pred ccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecc
Q 004133 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (772)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~ 126 (772)
|.....+...+...+......++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.++++....+.+++++++|+.
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 107 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS 107 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchH
Confidence 33334444444444321112467899999999999999999987768999999999999998887554448999999999
Q ss_pred CcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 127 SMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 127 ~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
+++ ++||+|+++..++...... ...+++++.++| ||.++..
T Consensus 108 ~~~----~~~D~v~~~~p~~~~~~~~-----~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 108 EFN----SRVDIVIMNPPFGSQRKHA-----DRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp GCC----CCCSEEEECCCCSSSSTTT-----THHHHHHHHHHC--SEEEEEE
T ss_pred HcC----CCCCEEEEcCCCccccCCc-----hHHHHHHHHHhc--CcEEEEE
Confidence 875 4899999988877664322 357889999998 6655444
No 163
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=4.6e-11 Score=120.86 Aligned_cols=103 Identities=9% Similarity=0.093 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhc-----cCCCCcEEEEeeccCcccccCCCccEEE
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV-----RDRSDMRWRVMDMTSMQVFMDETFDVIL 140 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~-----~~~~~v~f~~~D~~~l~~~~~~sfDvVi 140 (772)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+.+++. ...++++|+++|+.+++ +++++ |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEEE
Confidence 467899999999999999999983 3579999999999886433321 22347999999999999 77777 8776
Q ss_pred eccccc-----ccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 141 DKGGLD-----ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 141 ~~~~l~-----~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
...... ++.++ ..++++++++|||||++++.
T Consensus 104 ~~~~~~~~~~~~~~~~-------~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSS-------PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EESCCHHHHHHHHTSS-------SHHHHHHHHTEEEEEEEEEE
T ss_pred EEccchhhhhhhhccH-------HHHHHHHHHHcCCCcEEEEE
Confidence 322211 22222 58999999999999999984
No 164
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.19 E-value=9.3e-11 Score=113.11 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc-------ccCCCcc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV-------FMDETFD 137 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~-~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~-------~~~~sfD 137 (772)
.++.+|||+|||+|.++..+++. |. .+++++|+|+ +++. .++++.++|+.+.+. +++++||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 46789999999999999999887 43 5899999999 6531 578999999988641 3567999
Q ss_pred EEEecccccccccCccch----HHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 138 VILDKGGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 138 vVi~~~~l~~l~~~~~~~----~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+|++...+++........ .....+++++.++|+|||++++..+..+.
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 999988887664321000 01268999999999999999998876554
No 165
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.18 E-value=1.9e-10 Score=121.21 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccC-C-CCcEEEEeeccCcccccCCCccEEEec
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD-R-SDMRWRVMDMTSMQVFMDETFDVILDK 142 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~-~-~~v~f~~~D~~~l~~~~~~sfDvVi~~ 142 (772)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++.... + .++++.++|+.+ + +++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~-~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-F-ISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-C-CCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-c-CcCCCccEEEEc
Confidence 67889999999999999999886 2357999999999999998887544 3 579999999988 4 677899999972
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+.. ...+++++.++|||||++++.+...
T Consensus 187 -----~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 187 -----IPD-------PWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp -----CSC-------GGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred -----CcC-------HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 222 2478999999999999999988665
No 166
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.18 E-value=7.3e-11 Score=117.86 Aligned_cols=99 Identities=13% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.++++.. +++++++|+.+++ ++||+|+++..++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~----~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS----GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC----CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC----CCeeEEEECCCch
Confidence 3678999999999999999998877679999999999999987763 7999999998865 6899999999998
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+..... ...+++++.++| |+.+++...
T Consensus 122 ~~~~~~-----~~~~l~~~~~~~--g~~~~~~~~ 148 (200)
T 1ne2_A 122 SVVKHS-----DRAFIDKAFETS--MWIYSIGNA 148 (200)
T ss_dssp -----------CHHHHHHHHHHE--EEEEEEEEG
T ss_pred hccCch-----hHHHHHHHHHhc--CcEEEEEcC
Confidence 876532 257899999998 565555543
No 167
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.18 E-value=3.1e-11 Score=140.40 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~~~~sfDvVi~~~~l 145 (772)
.+.+|||||||.|.++..|++.|. +|||||+|+.+|+.|+..+...+ .+++|.++|+.++. .+.+++||+|++..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 368999999999999999999998 69999999999999988876554 57999999999973 1567899999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+|+.++.. ...+..+.+.|+++|..++..+.
T Consensus 145 ehv~~~~~-----~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHG-----IDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHC-----HHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHH-----HHHHHHHHHHhccccceeeEEec
Confidence 99976431 22334567778888876666544
No 168
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.17 E-value=4.3e-11 Score=131.18 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=79.0
Q ss_pred CCCeEEEEcCC------CchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccccc------C
Q 004133 68 PPPQILVPGCG------NSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFM------D 133 (772)
Q Consensus 68 ~~~~ILDlGCG------~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~------~ 133 (772)
++.+||||||| +|..+..++.. +..+|+|+|+|+.|. ...++++|+++|+.+++ +. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlp-f~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAE-FLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHH-HHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccc-hhhhhhccc
Confidence 46899999999 77777777664 345799999999862 13468999999999988 76 7
Q ss_pred CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 134 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 134 ~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++||+|++.+. ++..+ ...+|++++++|||||+|++.++..
T Consensus 287 ~sFDlVisdgs-H~~~d-------~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 287 GPFDIVIDDGS-HINAH-------VRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CCEEEEEECSC-CCHHH-------HHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred CCccEEEECCc-ccchh-------HHHHHHHHHHhcCCCeEEEEEeccc
Confidence 89999998754 33322 5789999999999999999987654
No 169
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.16 E-value=1.1e-10 Score=122.77 Aligned_cols=117 Identities=18% Similarity=0.201 Sum_probs=93.8
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccC----CCCcEEEEeec
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD----RSDMRWRVMDM 125 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~----~~~v~f~~~D~ 125 (772)
.....+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+++.+++.++++.... ..++++.++|+
T Consensus 86 ~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 86 KDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 344455555554 57889999999999999999985 3 457999999999999998877543 35799999999
Q ss_pred cCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 126 TSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 126 ~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
.+.+ +++++||+|++.. .+ ...+++++.++|+|||++++.+.....
T Consensus 163 ~~~~-~~~~~~D~v~~~~-----~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 208 (280)
T 1i9g_A 163 ADSE-LPDGSVDRAVLDM-----LA-------PWEVLDAVSRLLVAGGVLMVYVATVTQ 208 (280)
T ss_dssp GGCC-CCTTCEEEEEEES-----SC-------GGGGHHHHHHHEEEEEEEEEEESSHHH
T ss_pred HhcC-CCCCceeEEEECC-----cC-------HHHHHHHHHHhCCCCCEEEEEeCCHHH
Confidence 9987 7788999999732 22 237899999999999999998876544
No 170
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.15 E-value=2.2e-10 Score=125.96 Aligned_cols=106 Identities=16% Similarity=0.051 Sum_probs=89.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~--~~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++.... ..+++|..+|+. .+ ++. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~-~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ET-IPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TC-CCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CC-CCC-CceEEEhhh
Confidence 46789999999999999999987 2347999999 99999998877544 357999999998 44 555 899999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++.+++ ..+++++++++|+|||++++.+..
T Consensus 277 vlh~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 277 VLHDWDDDD-----VVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp CGGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred hhccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 999886543 568999999999999999998754
No 171
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.15 E-value=1.9e-10 Score=125.82 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++..... .+++|..+|+.+.+ +++. |+|++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~--D~v~~~~ 264 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES-YPEA--DAVLFCR 264 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC-CCCC--SEEEEES
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC-CCCC--CEEEEec
Confidence 567899999999999999999872 347999999 999999988765432 35999999999887 6543 9999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++++.+++ ..+++++++++|||||++++.++..
T Consensus 265 vlh~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 265 ILYSANEQL-----STIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp CGGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred hhccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeccc
Confidence 999886532 6799999999999999999887653
No 172
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.15 E-value=3e-10 Score=116.32 Aligned_cols=127 Identities=13% Similarity=0.034 Sum_probs=100.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..++..| ..+|+++|+++.+++.|+++....+. ++++.++|..+.. .+++.||+|+..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-~~~~~~D~IviaG 98 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-EEADNIDTITICG 98 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-ccccccCEEEEeC
Confidence 357899999999999999999986 35799999999999999988765543 5999999999876 4555899988766
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccccCCcEEEEEEcC
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 205 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~ 205 (772)
+.-.+ +..++....+.|+++|+|++.........+.++.. .+|.+.-..+-
T Consensus 99 mGg~l---------I~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~--~Gf~i~~E~lv 149 (230)
T 3lec_A 99 MGGRL---------IADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAA--NDFEIVAEDIL 149 (230)
T ss_dssp ECHHH---------HHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHH--TTEEEEEEEEE
T ss_pred CchHH---------HHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHH--CCCEEEEEEEE
Confidence 65444 56899999999999999999887654443333322 37888777754
No 173
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.15 E-value=1.6e-10 Score=126.81 Aligned_cols=105 Identities=20% Similarity=0.122 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++|.++|+.+ + ++. .||+|++..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P-LPV-TADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-CSC-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c-CCC-CCCEEEEec
Confidence 467899999999999999999873 347999999 999999988775443 379999999986 3 443 499999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+++++.+++ ...++++++++|||||++++.++
T Consensus 257 vl~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 VLLNWSDED-----ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 999876532 46899999999999999999876
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=1.4e-10 Score=124.86 Aligned_cols=112 Identities=17% Similarity=0.123 Sum_probs=91.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC--CeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~--~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l 128 (772)
.....+...+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+ .++++.++|+.+.
T Consensus 62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 445555666654 6789999999999999999998743 459999999999999988875443 4699999999986
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
. ..+++||+|++..+++++. +++.++|||||++++...
T Consensus 139 ~-~~~~~fD~Iv~~~~~~~~~-------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 V-PEFSPYDVIFVTVGVDEVP-------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp C-GGGCCEEEEEECSBBSCCC-------------HHHHHHEEEEEEEEEEBC
T ss_pred c-ccCCCeEEEEEcCCHHHHH-------------HHHHHhcCCCcEEEEEEC
Confidence 5 4678999999999998773 467889999999998753
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.14 E-value=9.5e-11 Score=119.19 Aligned_cols=120 Identities=9% Similarity=0.023 Sum_probs=89.4
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
....++..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 45 AKGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 344445554443 35789999999999999999985 2 3479999999999999988765433 359999999876
Q ss_pred -ccccc----CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 128 -MQVFM----DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 128 -l~~~~----~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
++.+. .++||+|+..+..++... ...+++.+ ++|||||++++.+...
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~-------~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLP-------DTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHH-------HHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchH-------HHHHHHhc-cccCCCeEEEEeCCCC
Confidence 33122 268999998776665533 34677777 9999999999876554
No 176
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=2.9e-10 Score=117.35 Aligned_cols=143 Identities=12% Similarity=0.010 Sum_probs=105.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..++..+. ..|+++|+++.+++.|+++....+. ++++.++|..+.. .+++.||+|+..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~-~~~~~~D~Iviag 98 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI-EKKDAIDTIVIAG 98 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-CccccccEEEEeC
Confidence 3578999999999999999999863 4799999999999999988765543 5999999998865 4444699988766
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEe
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADK 223 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K 223 (772)
+.-.+ +..++.+..+.|+++|+|++.........+.++.. .+|.+.-..+-.. ....|.+..+.+
T Consensus 99 mGg~l---------I~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~--~Gf~i~~E~lv~e----~~k~Yeii~~~~ 163 (244)
T 3gnl_A 99 MGGTL---------IRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQ--NNWLITSEAILRE----DNKVYEIMVLAP 163 (244)
T ss_dssp ECHHH---------HHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHH--HTEEEEEEEEEEE----TTEEEEEEEEEE
T ss_pred CchHH---------HHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHH--CCCEEEEEEEEEE----CCEEEEEEEEEe
Confidence 55433 67899999999999999999886654443333332 2787766554321 123445555565
Q ss_pred cC
Q 004133 224 EN 225 (772)
Q Consensus 224 ~~ 225 (772)
..
T Consensus 164 ~~ 165 (244)
T 3gnl_A 164 SE 165 (244)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 177
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.14 E-value=9.7e-11 Score=119.69 Aligned_cols=101 Identities=13% Similarity=0.271 Sum_probs=85.7
Q ss_pred CeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 544 VKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 544 ~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
.+||.||+|+|..+.++...+| ..+|++||+|+.+++.|++++ |+ .+++++++.+|+.+++....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-~~~~i~~~~gda~~~l~~~~---------- 126 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-SPSRVRFLLSRPLDVMSRLA---------- 126 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-CGGGEEEECSCHHHHGGGSC----------
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcCcEEEEEcCHHHHHHHhc----------
Confidence 4999999999999999998875 679999999999999999998 44 12689999999999987653
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
...||+|++|.+..+ ...+++.+.+.|+|||+++++
T Consensus 127 ---------------------~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 127 ---------------------NDSYQLVFGQVSPMD-------------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---------------------TTCEEEEEECCCTTT-------------HHHHHHHHHHHEEEEEEEEET
T ss_pred ---------------------CCCcCeEEEcCcHHH-------------HHHHHHHHHHHcCCCcEEEEe
Confidence 257999999865432 267999999999999999985
No 178
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.14 E-value=1e-10 Score=119.48 Aligned_cols=102 Identities=9% Similarity=0.069 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEEeeccCcc-cccCCCccEEEe
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQ-VFMDETFDVILD 141 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~---~~v~f~~~D~~~l~-~~~~~sfDvVi~ 141 (772)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+.. .+++++||+|+.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 3459999999999999999885 2 3579999999999999988875543 36999999998753 234689999987
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
...... ...+++++.++|||||++++-.
T Consensus 136 d~~~~~----------~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSPMD----------LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCTTT----------HHHHHHHHHHHEEEEEEEEETT
T ss_pred cCcHHH----------HHHHHHHHHHHcCCCcEEEEeC
Confidence 543211 5679999999999999998843
No 179
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.13 E-value=9.5e-11 Score=120.09 Aligned_cols=109 Identities=18% Similarity=0.109 Sum_probs=75.0
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCC-HHHHHHH---HHHhccCC-CCcEEEEeeccCccccc-CCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFS-KVVISDM---LRRNVRDR-SDMRWRVMDMTSMQVFM-DETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS-~~~I~~a---~~~~~~~~-~~v~f~~~D~~~l~~~~-~~sfDvVi 140 (772)
++.+|||+|||+|.++..++.. ....|+|+|+| +.|++.| +++....+ +++.|.++|+.+++ .. .+.+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~-~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP-FELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC-GGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh-hhccCeEEEEE
Confidence 6789999999999999999864 23469999999 7777766 55554333 47999999999986 21 24455554
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
............ ......++++++|+|||||++++++
T Consensus 103 ~~~~~~~~~~~~--~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYV--IKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHH--HTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhh--hcchHHHHHHHHHhcCCCcEEEEEE
Confidence 433221110000 0002468999999999999999854
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.13 E-value=2.4e-10 Score=116.29 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=88.4
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHhccC------CCCcEEEEee
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------RSDMRWRVMD 124 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~-~~V~gvDiS~~~I~~a~~~~~~~------~~~v~f~~~D 124 (772)
....+...+.. ...++.+|||+|||+|.++..+++. |. .+|+++|+|+.+++.++++.... ..++++.++|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 33344455431 1157889999999999999999886 43 47999999999999998776442 3479999999
Q ss_pred ccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 125 MTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 125 ~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+.+.. ..+++||+|++...+.++ ++++.++|||||++++....
T Consensus 142 ~~~~~-~~~~~fD~i~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 142 GRMGY-AEEAPYDAIHVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGGCC-GGGCCEEEEEECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred cccCc-ccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 98766 567889999988776544 35788999999999987654
No 181
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.13 E-value=1e-10 Score=132.91 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.|+++....+ .+++++++|+.+++ ++ ++||+|++..+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LP-EQVDIIISEPM 233 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCC
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-cC-CCeEEEEEeCc
Confidence 46789999999999999999988777899999999 9999987765443 47999999999987 54 68999999887
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEE
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 177 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii 177 (772)
++++..+. ....+.++.++|||||++++
T Consensus 234 ~~~~~~e~-----~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNER-----MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCHH-----HHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 77665432 45677889999999999984
No 182
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.13 E-value=9.6e-11 Score=127.10 Aligned_cols=132 Identities=20% Similarity=0.058 Sum_probs=93.5
Q ss_pred cccchhhHHHHHHHhhc-CCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC---CcEEE
Q 004133 46 WYAEWPQLRDPLISLIG-APTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWR 121 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~-~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~---~v~f~ 121 (772)
|+.+.......+..++. . .++.+|||+|||+|.++..++..|. +|+++|+|+.+++.+++++...+. +++|+
T Consensus 133 ~f~dq~~~~~~l~~~~~~~---~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i 208 (332)
T 2igt_A 133 VFPEQIVHWEWLKNAVETA---DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWI 208 (332)
T ss_dssp CCGGGHHHHHHHHHHHHHS---SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEE
T ss_pred echHHHHHHHHHHHHHHhc---CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 44444445555666663 2 2567999999999999999999887 899999999999999887654332 48999
Q ss_pred EeeccCcccc---cCCCccEEEecccccccccCc---cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 122 VMDMTSMQVF---MDETFDVILDKGGLDALMEPE---LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 122 ~~D~~~l~~~---~~~sfDvVi~~~~l~~l~~~~---~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++|+.++... ..++||+|++........... ........+++++.++|+|||++++....
T Consensus 209 ~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 209 CEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9999885401 157899999854322111000 01122678999999999999997765544
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.13 E-value=3.9e-10 Score=119.31 Aligned_cols=106 Identities=14% Similarity=0.089 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeC-CHHHHHHHHHHh-----ccCC------CCcEEEEeeccCcc-cc--
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF-SKVVISDMLRRN-----VRDR------SDMRWRVMDMTSMQ-VF-- 131 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDi-S~~~I~~a~~~~-----~~~~------~~v~f~~~D~~~l~-~~-- 131 (772)
.++.+|||+|||+|.++..++..|..+|+++|+ |+.+++.++++. ...+ .++++...|..+.. .+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 357899999999999999999888768999999 899999998876 2222 36888877766532 12
Q ss_pred --cCCCccEEEecccccccccCccchHHHHHHHHHHHhccc---c--CeEEEEEE
Q 004133 132 --MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK---S--GGKFVCLT 179 (772)
Q Consensus 132 --~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLk---p--GG~~ii~~ 179 (772)
.+++||+|++..++++... ...+++.+.++|+ | ||+++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~-------~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQA-------HDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGG-------HHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccChHH-------HHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 3678999999888877544 6789999999999 9 99877653
No 184
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.13 E-value=1.9e-10 Score=119.42 Aligned_cols=105 Identities=10% Similarity=0.027 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC-ccccc-CCCccEEE
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS-MQVFM-DETFDVIL 140 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~-l~~~~-~~sfDvVi 140 (772)
.++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .++++.++|+.+ ++.+. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35789999999999999999987 2 4579999999999999988875443 369999999987 33121 34899999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+..... . ...+++++.++|||||++++....
T Consensus 142 ~d~~~~-----~-----~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDADKP-----N-----NPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECSCGG-----G-----HHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECCchH-----H-----HHHHHHHHHHhcCCCeEEEEeCCC
Confidence 754211 1 568999999999999999887544
No 185
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.12 E-value=1.4e-10 Score=118.68 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=92.7
Q ss_pred chhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeec
Q 004133 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (772)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~ 125 (772)
..+.....+..++.. .++.+|||+|||+|..+..++... ..+|+++|+|+.+++.++++....+ .++++.++|+
T Consensus 38 ~~~~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 38 MDLLGMESLLHLLKM---AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp CCHHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred cCHHHHHHHHHHHhc---cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 344555666666543 467899999999999999999872 3579999999999999988875443 3699999999
Q ss_pred cCc-cccc--CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 126 TSM-QVFM--DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 126 ~~l-~~~~--~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
.+. + .. +++||+|++..... . ...+++++.++|+|||++++.+.
T Consensus 115 ~~~~~-~~~~~~~fD~I~~~~~~~-----~-----~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 115 LQLGE-KLELYPLFDVLFIDAAKG-----Q-----YRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGSHH-HHTTSCCEEEEEEEGGGS-----C-----HHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHH-hcccCCCccEEEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEEcC
Confidence 884 3 33 57899999866543 1 57899999999999999998754
No 186
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.12 E-value=3e-10 Score=113.33 Aligned_cols=106 Identities=13% Similarity=0.246 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccccc-------C----CC
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFM-------D----ET 135 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~-------~----~s 135 (772)
.++.+|||+|||+|.++..+++.+ ..|+|+|+++. ...++++++++|+++.+ .. . ++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~----------~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEM----------EEIAGVRFIRCDIFKET-IFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCC----------CCCTTCEEEECCTTSSS-HHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC-CcEEEEecccc----------ccCCCeEEEEccccCHH-HHHHHHHHhhcccCCc
Confidence 468999999999999999999884 47999999983 12358999999999865 21 1 49
Q ss_pred ccEEEecccccccccC----ccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 136 FDVILDKGGLDALMEP----ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~----~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
||+|++....+..... .........+++.+.++|||||.|++..+..+.
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 9999987644322110 001122568899999999999999998886554
No 187
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.12 E-value=1.7e-10 Score=119.57 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=85.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHc---CCCeEEEEeCCHHHHHHHHHHhccC---CC--C----------------------
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA---GFHGITNVDFSKVVISDMLRRNVRD---RS--D---------------------- 117 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~---g~~~V~gvDiS~~~I~~a~~~~~~~---~~--~---------------------- 117 (772)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++.... .. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999876 2247999999999999998765432 11 1
Q ss_pred ---cE-------------EEEeeccCcccc-----cCCCccEEEecccccccccCc--cchHHHHHHHHHHHhccccCeE
Q 004133 118 ---MR-------------WRVMDMTSMQVF-----MDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGK 174 (772)
Q Consensus 118 ---v~-------------f~~~D~~~l~~~-----~~~sfDvVi~~~~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~ 174 (772)
++ |.++|+.+.. . ...+||+|+++..+....... ........+++++.++|+|||+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPR-ALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGG-GHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeeccccccc-ccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 56 9999998743 1 345899999987665443211 1123477999999999999999
Q ss_pred EEEEEcCc
Q 004133 175 FVCLTLAE 182 (772)
Q Consensus 175 ~ii~~~~~ 182 (772)
++++....
T Consensus 210 l~~~~~~~ 217 (250)
T 1o9g_A 210 IAVTDRSR 217 (250)
T ss_dssp EEEEESSS
T ss_pred EEEeCcch
Confidence 99865443
No 188
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.12 E-value=1.4e-10 Score=126.28 Aligned_cols=107 Identities=12% Similarity=0.138 Sum_probs=89.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 69 PPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 69 ~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
+.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++..... .+++|..+|+.+.+.+..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999887 3357999999 789999987765433 369999999988652356679999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++.+++ ...++++++++|+|||++++.+..
T Consensus 259 h~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYFDARE-----AREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGSCHHH-----HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 9886533 689999999999999999998754
No 189
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.12 E-value=1.1e-10 Score=120.42 Aligned_cols=110 Identities=10% Similarity=-0.007 Sum_probs=87.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++.++.+..|. ++++||++|.|++.|++++.- ...+++++.+|+.+.+....
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~----------- 125 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPR-QTHKVIPLKGLWEDVAPTLP----------- 125 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGG-CSSEEEEEESCHHHHGGGSC-----------
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhh-CCCceEEEeehHHhhccccc-----------
Confidence 45579999999999999999888765 899999999999999999853 35678999999998866543
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC-cHHHHHHHHHccCCCcEEEEE
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~-~~~fl~~~~~~L~~~Gilv~N 689 (772)
...||.|+.|...... ...++. -..+++.++++|+|||+|++.
T Consensus 126 --------------------~~~FD~i~~D~~~~~~------~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 126 --------------------DGHFDGILYDTYPLSE------ETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp --------------------TTCEEEEEECCCCCBG------GGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred --------------------ccCCceEEEeeeeccc------chhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4679999998765421 112222 367899999999999999863
No 190
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.12 E-value=3.6e-10 Score=112.54 Aligned_cols=108 Identities=13% Similarity=0.176 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-C--CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc--------------
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-G--FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------------- 129 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g--~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~-------------- 129 (772)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+ ..++++++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 46789999999999999999987 3 3579999999921 2357899999998764
Q ss_pred ----------cccCCCccEEEecccccccccCc-cc---hHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 130 ----------VFMDETFDVILDKGGLDALMEPE-LG---HKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 130 ----------~~~~~sfDvVi~~~~l~~l~~~~-~~---~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
.+++++||+|++.+++++..... +. ......+++++.++|||||+|++..+..+.
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 03567999999988776531100 00 011345899999999999999997776443
No 191
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.12 E-value=8.3e-11 Score=123.92 Aligned_cols=110 Identities=19% Similarity=0.157 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++....+ .+++|.++|+.+. +++++||+|+++..+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG--GTTCCEEEEEECCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh--cccCCccEEEECCCC
Confidence 5679999999999999999865 44579999999999999988775433 3699999999874 456799999997433
Q ss_pred ccccc-----------C-------ccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 146 DALME-----------P-------ELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 146 ~~l~~-----------~-------~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
..... + +++......+++++.++|||||++++..
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22100 0 0111336889999999999999998864
No 192
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.11 E-value=1.8e-10 Score=122.82 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc------CCCCcEEEEeeccCcccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSMQVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~------~~~~v~f~~~D~~~l~~~~~~sfDvVi 140 (772)
++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++.+.. ..++++++++|+.+.....+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999987 456899999999999999887532 246899999999875313568999999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+........... -....+++.+.++|+|||++++..
T Consensus 163 ~D~~~p~~~~~~---l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIGPGES---LFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCccCcchh---ccHHHHHHHHHHhcCCCCEEEEec
Confidence 855432211100 002689999999999999999876
No 193
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.11 E-value=2.8e-10 Score=117.84 Aligned_cols=114 Identities=18% Similarity=0.100 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhcc---------CCCCcEEEEeeccC-cc-cccCCC
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVR---------DRSDMRWRVMDMTS-MQ-VFMDET 135 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~---------~~~~v~f~~~D~~~-l~-~~~~~s 135 (772)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.++++... ...++.++++|+.+ ++ .+++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 567999999999999999998853 4799999999999999876543 23589999999987 43 256788
Q ss_pred ccEEEecccccccccCcc-chHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 136 FDVILDKGGLDALMEPEL-GHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~-~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+|.|+....-.+...... .......+++++.++|+|||++++.+-.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 999874321111000000 0000147999999999999999997644
No 194
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.11 E-value=2.3e-10 Score=124.09 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=89.1
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CC-CeEEEEeCCHHHHHHHHHHhccC------------CCC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------------RSD 117 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~-~~V~gvDiS~~~I~~a~~~~~~~------------~~~ 117 (772)
.....+...+.. .++.+|||+|||+|.++..++.. |. .+|+++|+++.+++.|+++.... ..+
T Consensus 92 ~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 92 KDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp HHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred HHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 334445555654 57899999999999999999987 54 57999999999999998876531 257
Q ss_pred cEEEEeeccCcc-cccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhh
Q 004133 118 MRWRVMDMTSMQ-VFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 118 v~f~~~D~~~l~-~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~ 186 (772)
+++.++|+.+.. .+++++||+|++.. ..+ ..+++++.++|||||++++.......+.
T Consensus 169 v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~-------~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 226 (336)
T 2b25_A 169 VDFIHKDISGATEDIKSLTFDAVALDM-----LNP-------HVTLPVFYPHLKHGGVCAVYVVNITQVI 226 (336)
T ss_dssp EEEEESCTTCCC-------EEEEEECS-----SST-------TTTHHHHGGGEEEEEEEEEEESSHHHHH
T ss_pred eEEEECChHHcccccCCCCeeEEEECC-----CCH-------HHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 999999999862 15677899999742 121 2478999999999999998887655443
No 195
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.11 E-value=2.1e-10 Score=118.30 Aligned_cols=108 Identities=14% Similarity=0.238 Sum_probs=88.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
..+.+||.||+|.|..+.++...+| ..+|++||+||.++++|++++ |+ +++++++++|+.+++......
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 141 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLALDNLLQG----- 141 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhc-----
Confidence 3567999999999999999999887 689999999999999999998 55 568999999999998765310
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
......||+|++|.+.. ....+|+.+.+.|+|||++++.
T Consensus 142 ---------------------~~~~~~fD~I~~d~~~~-------------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 142 ---------------------QESEGSYDFGFVDADKP-------------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp ---------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCCCCcCEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 00125799999986432 1378999999999999999984
No 196
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.10 E-value=2.9e-10 Score=124.23 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.++.+|||+|||+|.++..+++.+ ...++++|+ +.+++.++++....+ .+++|+++|+.+ + ++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P-LPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C-CSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C-CCC-CccEEEEcc
Confidence 467899999999999999998874 347999999 999999988765433 379999999986 3 444 499999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++.+++ ..+++++++++|||||++++.++.
T Consensus 258 vl~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 258 VLLNWPDHD-----AVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CGGGSCHHH-----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999875532 568999999999999999998765
No 197
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.10 E-value=3.2e-10 Score=117.52 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=91.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC-C-CcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~-~-~v~f~~~D~~~ 127 (772)
.....+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|+++....+ . ++++.++|+.+
T Consensus 80 ~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 80 KDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred hHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 344456666654 67899999999999999999988 4 4579999999999999988865433 3 49999999996
Q ss_pred cccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 128 MQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 128 l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
. +++++||+|++. ..+ ...+++++.++|+|||++++......
T Consensus 157 ~--~~~~~~D~v~~~-----~~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~ 198 (255)
T 3mb5_A 157 G--IEEENVDHVILD-----LPQ-------PERVVEHAAKALKPGGFFVAYTPCSN 198 (255)
T ss_dssp C--CCCCSEEEEEEC-----SSC-------GGGGHHHHHHHEEEEEEEEEEESSHH
T ss_pred c--cCCCCcCEEEEC-----CCC-------HHHHHHHHHHHcCCCCEEEEEECCHH
Confidence 4 577899999973 222 24689999999999999999876543
No 198
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.10 E-value=1.6e-09 Score=109.77 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=88.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|.|..+.++...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 128 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALDSLQQIEN------- 128 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457999999999999999999988 789999999999999999987 54 56899999999998877541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++|.... ....+|+.+.+.|+|||++++.-+
T Consensus 129 ---------------------~~~~~fD~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 129 ---------------------EKYEPFDFIFIDADKQ-------------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp ---------------------TTCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred ---------------------cCCCCcCEEEEcCCcH-------------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 0114699999976422 226899999999999999998743
No 199
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.10 E-value=3.4e-10 Score=117.63 Aligned_cols=108 Identities=15% Similarity=0.203 Sum_probs=88.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
..+.+||.||+|+|..+.++...+| ..+|++||+++.+++.|++++ |+ +++++++++|+.+++......
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 150 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPVLDEMIKD----- 150 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHHHHHHhc-----
Confidence 3567999999999999999999987 679999999999999999987 44 568999999999998765210
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
......||+|++|.+..+ ...+|+.+.+.|+|||++++.
T Consensus 151 ---------------------~~~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 151 ---------------------EKNHGSYDFIFVDADKDN-------------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp ---------------------GGGTTCBSEEEECSCSTT-------------HHHHHHHHHHHBCTTCCEEEE
T ss_pred ---------------------cCCCCCEEEEEEcCchHH-------------HHHHHHHHHHhCCCCeEEEEe
Confidence 000257999999865321 278999999999999999975
No 200
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.10 E-value=2.2e-10 Score=116.29 Aligned_cols=117 Identities=14% Similarity=0.034 Sum_probs=87.2
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
.....+..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+ .+++++++|+.+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 45 TQGKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 333444444333 35789999999999999999987 2 3479999999999999988875433 359999999976
Q ss_pred cc-ccc---CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 128 MQ-VFM---DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 128 l~-~~~---~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.. .+. .++||+|+....... ...+++++.++|+|||++++....
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQN----------NPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGGG----------HHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHHHHHhcCCCCcCEEEEcCCcHH----------HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 42 111 267999997654221 568999999999999988876543
No 201
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.10 E-value=1.8e-10 Score=116.95 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=87.6
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
.....+..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+
T Consensus 51 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 51 EQAQLLALLVKL---MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 333444444433 35789999999999999999986 2 4579999999999999988875443 359999999966
Q ss_pred c-ccccC----CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 128 M-QVFMD----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 128 l-~~~~~----~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
. +.+.. ++||+|+...... ....+++++.++|||||++++....
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~~~~----------~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDADKA----------NTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECSCGG----------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHhhhccCCCCccEEEECCCHH----------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 4 21221 7899999644311 1568999999999999999986544
No 202
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.09 E-value=3.1e-10 Score=122.68 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=87.3
Q ss_pred CeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 70 ~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~--~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++.... ..+++|..+|+.+ + ++ +.||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E-VP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-CC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-CC-CCCCEEEEchhcc
Confidence 89999999999999999887 3347999999 99999998776432 3479999999988 5 55 6899999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++.+++ ..+++++++++|+|||++++.+..
T Consensus 245 ~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 245 DLDEAA-----SLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp GCCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 875532 569999999999999999998754
No 203
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.09 E-value=7.8e-10 Score=113.01 Aligned_cols=126 Identities=14% Similarity=0.141 Sum_probs=96.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccC-CCccEEEec
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMD-ETFDVILDK 142 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~-~sfDvVi~~ 142 (772)
.++.+|||+|||+|.++..++..+ ..+|+++|+++.+++.|+++....+. ++++.++|..+. ++. +.||+|+..
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~--l~~~~~~D~Ivia 91 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA--FEETDQVSVITIA 91 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG--CCGGGCCCEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh--cccCcCCCEEEEc
Confidence 357899999999999999999986 35799999999999999988765553 599999999653 233 379998876
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccccCCcEEEEEEcC
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 205 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~~~ 205 (772)
++-..+ +..++.+..+.|+++|+|++....+....+.++. ..+|.+.-..+-
T Consensus 92 G~Gg~~---------i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~--~~Gf~i~~e~lv 143 (225)
T 3kr9_A 92 GMGGRL---------IARILEEGLGKLANVERLILQPNNREDDLRIWLQ--DHGFQIVAESIL 143 (225)
T ss_dssp EECHHH---------HHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHH--HTTEEEEEEEEE
T ss_pred CCChHH---------HHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHH--HCCCEEEEEEEE
Confidence 654332 5789999999999999999987755444333333 237887776653
No 204
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=4.2e-10 Score=116.77 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=88.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|+|..+.++...+| ..+|++||+++.+++.|++++ |+ .++++++++|+.+++....
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~l~~~~-------- 132 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQSLESLG-------- 132 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHTCC--------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHhcC--------
Confidence 467999999999999999999988 789999999999999999998 54 4689999999999887653
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
....||+|++|....+ ...+|+.+.+.|+|||++++.-+
T Consensus 133 ----------------------~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 133 ----------------------ECPAFDLIFIDADKPN-------------NPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ----------------------SCCCCSEEEECSCGGG-------------HHHHHHHHHHTCCTTCEEEEECC
T ss_pred ----------------------CCCCeEEEEECCchHH-------------HHHHHHHHHHhcCCCeEEEEeCC
Confidence 1247999999764221 26799999999999999998644
No 205
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.08 E-value=1.2e-09 Score=120.35 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=95.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSM 128 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l 128 (772)
.+...+.... . .++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++...+. +++|.++|+.++
T Consensus 205 ~la~~l~~~~-~---~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 205 SIANAMIELA-E---LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHHH-T---CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred HHHHHHHHhh-c---CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 4444455555 3 5788999999999999999999864 3699999999999999988765553 799999999999
Q ss_pred ccccCCCccEEEecccccccccCc-cchHHHHHHHHHHHhccccCeEEEEEEcCchhhh
Q 004133 129 QVFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 186 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~-~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~ 186 (772)
+ +++++||+|+++..+..-.... .-......+++++.++| ||.+++++.....+.
T Consensus 281 ~-~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~ 336 (373)
T 3tm4_A 281 S-QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIE 336 (373)
T ss_dssp G-GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHH
T ss_pred C-cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHH
Confidence 8 7889999999977655432211 11233578999999999 666666665544433
No 206
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.07 E-value=6.3e-10 Score=113.16 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=87.7
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhccC------CCCcEE
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRD------RSDMRW 120 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~------~~V~gvDiS~~~I~~a~~~~~~~------~~~v~f 120 (772)
....+...+.. ...++.+|||+|||+|.++..++.... .+|+++|+++.+++.++++.... ..++++
T Consensus 66 ~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 144 (227)
T 2pbf_A 66 MHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKI 144 (227)
T ss_dssp HHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEE
T ss_pred HHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEE
Confidence 34445555531 115678999999999999999988742 47999999999999998876543 357999
Q ss_pred EEeeccCccc---ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 121 RVMDMTSMQV---FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 121 ~~~D~~~l~~---~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.++|+.+... ...++||+|++...++++ ++++.++|||||++++....
T Consensus 145 ~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 145 IHKNIYQVNEEEKKELGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EECCGGGCCHHHHHHHCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEEE
T ss_pred EECChHhcccccCccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEcc
Confidence 9999987420 245789999998877654 36788999999999987643
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.07 E-value=3.1e-10 Score=115.72 Aligned_cols=114 Identities=14% Similarity=0.175 Sum_probs=88.2
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-CC------CeEEEEeCCHHHHHHHHHHhccC------CCCc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF------HGITNVDFSKVVISDMLRRNVRD------RSDM 118 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g~------~~V~gvDiS~~~I~~a~~~~~~~------~~~v 118 (772)
.+...+.+.+.. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.++++.... ..++
T Consensus 69 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 69 HMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 344445555531 1157789999999999999999885 42 47999999999999998876433 3579
Q ss_pred EEEEeeccCcccccC-CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 119 RWRVMDMTSMQVFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 119 ~f~~~D~~~l~~~~~-~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++.++|+.+ . +++ ++||+|++...++++. +++.++|||||++++....
T Consensus 148 ~~~~~d~~~-~-~~~~~~fD~I~~~~~~~~~~-------------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 148 LIVEGDGRK-G-YPPNAPYNAIHVGAAAPDTP-------------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEESCGGG-C-CGGGCSEEEEEECSCBSSCC-------------HHHHHTEEEEEEEEEEESC
T ss_pred EEEECCccc-C-CCcCCCccEEEECCchHHHH-------------HHHHHHhcCCCEEEEEEec
Confidence 999999988 3 444 7899999988877652 5789999999999988654
No 208
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.07 E-value=1.5e-10 Score=122.76 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcE-EEEeeccCcc--cccCCCccEEEeccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMR-WRVMDMTSMQ--VFMDETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~-f~~~D~~~l~--~~~~~sfDvVi~~~~ 144 (772)
++.+|||+|||||.++..|++.|..+|+|+|+|+.|++.+.++. +++. +...|+..++ .++..+||+|++..+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----cccceecccCceecchhhCCCCCCCEEEEEee
Confidence 56799999999999999999998878999999999998754322 2332 2233444433 134456999998777
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
+.++ ..+|.+++|+|||||+++++
T Consensus 161 f~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 161 FISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred HhhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 7654 47999999999999999987
No 209
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.07 E-value=9.3e-10 Score=113.18 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=89.5
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCccccc
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFM 132 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~ 132 (772)
..+...+.. .++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++..... .++++..+|+.+.. ++
T Consensus 81 ~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~ 155 (248)
T 2yvl_A 81 FYIALKLNL---NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VP 155 (248)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CC
T ss_pred HHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cC
Confidence 345555544 57889999999999999999988 4579999999999999988775443 57999999998854 36
Q ss_pred CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 133 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 133 ~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
++.||+|++.. .+ ...+++++.++|+|||++++......
T Consensus 156 ~~~~D~v~~~~-----~~-------~~~~l~~~~~~L~~gG~l~~~~~~~~ 194 (248)
T 2yvl_A 156 EGIFHAAFVDV-----RE-------PWHYLEKVHKSLMEGAPVGFLLPTAN 194 (248)
T ss_dssp TTCBSEEEECS-----SC-------GGGGHHHHHHHBCTTCEEEEEESSHH
T ss_pred CCcccEEEECC-----cC-------HHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 77899999732 12 24688999999999999999887543
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.07 E-value=1.7e-10 Score=119.02 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=84.6
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc----C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeec
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~----g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~ 125 (772)
+.....+..++.. .++.+|||+|||+|..+..|++. + ..+|+++|+|+.+++.++ . ...+++++++|+
T Consensus 67 p~~~~~l~~~l~~---~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-~---~~~~v~~~~gD~ 139 (236)
T 2bm8_A 67 PDTQAVYHDMLWE---LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-S---DMENITLHQGDC 139 (236)
T ss_dssp HHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-G---GCTTEEEEECCS
T ss_pred HHHHHHHHHHHHh---cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-c---cCCceEEEECcc
Confidence 3444455555543 24679999999999999999886 2 357999999999988775 1 236899999999
Q ss_pred cCc---ccccC-CCccEEEecccccccccCccchHHHHHHHHHHHh-ccccCeEEEEEEc
Q 004133 126 TSM---QVFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR-LLKSGGKFVCLTL 180 (772)
Q Consensus 126 ~~l---~~~~~-~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~r-vLkpGG~~ii~~~ 180 (772)
.+. + +.. .+||+|+.... + . . ...++.++.+ +|||||++++.++
T Consensus 140 ~~~~~l~-~~~~~~fD~I~~d~~-~-~---~-----~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 140 SDLTTFE-HLREMAHPLIFIDNA-H-A---N-----TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SCSGGGG-GGSSSCSSEEEEESS-C-S---S-----HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hhHHHHH-hhccCCCCEEEECCc-h-H---h-----HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 984 5 333 47999987554 2 1 1 5789999997 9999999999754
No 211
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.07 E-value=5.7e-10 Score=116.98 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=85.4
Q ss_pred CCeEEEEcCCC--chhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCccc-----ccCCCcc-
Q 004133 69 PPQILVPGCGN--SRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQV-----FMDETFD- 137 (772)
Q Consensus 69 ~~~ILDlGCG~--G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~-----~~~~sfD- 137 (772)
..+|||||||+ +.++..++.. +..+|+++|.|+.||+.+++++.... .+++|+++|+.++.. ...+.||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 46999999997 4444555443 34579999999999999998875432 369999999998630 1135566
Q ss_pred ----EEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 138 ----VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 138 ----vVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
.|+++.+|||+.+.++ ...+++++.+.|+|||+|++.++..+
T Consensus 159 ~~p~av~~~avLH~l~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CCcchHHhhhhHhcCCchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 6889999999987542 36899999999999999999987754
No 212
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.06 E-value=4.3e-10 Score=115.40 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=86.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHH-hhcccCccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVR-EMKSSSATDEMSV 619 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~-~~~~~~~~~~~~~ 619 (772)
.+.+||.||+|.|.++.++...+|..+|++||+++.+++.|++++.-. ..++++++.+|+.+++. ...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~---------- 140 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVND---------- 140 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTT----------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhcc----------
Confidence 467999999999999999999888889999999999999999987211 14689999999998876 532
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
.+||+|++|....+ ...+|+.+.+.|+|||+|+++
T Consensus 141 ----------------------~~fD~V~~~~~~~~-------------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 141 ----------------------KVYDMIFIDAAKAQ-------------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ----------------------SCEEEEEEETTSSS-------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------------CCccEEEEcCcHHH-------------HHHHHHHHHHhcCCCeEEEEe
Confidence 56999999864331 267999999999999999984
No 213
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.06 E-value=4.6e-10 Score=120.83 Aligned_cols=122 Identities=15% Similarity=0.041 Sum_probs=90.1
Q ss_pred HHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCccccc
Q 004133 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFM 132 (772)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~ 132 (772)
.+...+.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+ .+++++++|+.+++ ..
T Consensus 109 l~~~~l~~---~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~-~~ 184 (315)
T 1ixk_A 109 YPPVALDP---KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-EL 184 (315)
T ss_dssp HHHHHHCC---CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-GG
T ss_pred HHHHHhCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc-cc
Confidence 34455554 57889999999999999999986 23579999999999999988875433 37999999999987 45
Q ss_pred CCCccEEEecc------cccccccCc--cc-------hHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 133 DETFDVILDKG------GLDALMEPE--LG-------HKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 133 ~~sfDvVi~~~------~l~~l~~~~--~~-------~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++||+|++.. ++....+.. .. ......+++++.++|||||++++.+.+
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 67899999742 232111100 00 011368999999999999999998765
No 214
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.06 E-value=4.1e-10 Score=123.72 Aligned_cols=102 Identities=18% Similarity=0.157 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||||||+|.++...++.|.++|++||.|+ |++.|++....++ ..++++.+|++++. ++ +.||+|++..+-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~-lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE-LP-EQVDAIVSEWMG 159 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCCB
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec-CC-ccccEEEeeccc
Confidence 5789999999999999999999988999999997 7888877665443 46999999999998 55 789999986655
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEE
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFV 176 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~i 176 (772)
..+..... +..++....|+|||||+++
T Consensus 160 ~~l~~e~~----l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 160 YGLLHESM----LSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TTBTTTCS----HHHHHHHHHHHEEEEEEEE
T ss_pred ccccccch----hhhHHHHHHhhCCCCceEC
Confidence 55544321 6788888899999999876
No 215
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.06 E-value=4.4e-10 Score=120.38 Aligned_cols=110 Identities=19% Similarity=0.208 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhc-----cCCCCcEEEEeeccCcccc--cCCCccEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-----RDRSDMRWRVMDMTSMQVF--MDETFDVI 139 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~-----~~~~~v~f~~~D~~~l~~~--~~~sfDvV 139 (772)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++. ...++++++++|+.++. . .+++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV-RQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH-HSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH-HhccCCceeEE
Confidence 5689999999999999999987 45689999999999999987652 12468999999998865 3 47899999
Q ss_pred EecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 140 LDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 140 i~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
++........... -....++++++++|||||++++..-.
T Consensus 174 i~d~~~~~~~~~~---l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 174 IIDTTDPAGPASK---LFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEECC------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCCCccccchh---hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9865543321110 00158999999999999999987543
No 216
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.05 E-value=3.9e-10 Score=118.92 Aligned_cols=123 Identities=17% Similarity=0.046 Sum_probs=90.2
Q ss_pred HHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccc-
Q 004133 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVF- 131 (772)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~- 131 (772)
.+..++.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+ .++++.++|+.+++ .
T Consensus 74 l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-~~ 149 (274)
T 3ajd_A 74 IPPIVLNP---REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYK-DY 149 (274)
T ss_dssp HHHHHHCC---CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHH-HH
T ss_pred HHHHHhCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcc-hh
Confidence 34455554 57889999999999999999884 43579999999999999988875544 37999999999876 3
Q ss_pred ---cCCCccEEEeccccccc---cc-Ccc-------chHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 132 ---MDETFDVILDKGGLDAL---ME-PEL-------GHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 132 ---~~~sfDvVi~~~~l~~l---~~-~~~-------~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
..++||+|++....... .. +.. ......++++++.++|||||++++.+.+-
T Consensus 150 ~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 150 LLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 26789999976322111 00 000 00014789999999999999999987653
No 217
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.05 E-value=3.4e-10 Score=113.91 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=80.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc-ccccCCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QVFMDETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l-~~~~~~sfDvVi~~ 142 (772)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+. + ..++ ||+|+..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~-fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA-GQRD-IDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT-TCCS-EEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc-cCCC-CCEEEEc
Confidence 4679999999999999999886 2 3579999999999999987764332 3689999999874 4 3456 9999876
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
... .. ...+++++.++|||||++++..
T Consensus 134 ~~~-----~~-----~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CDV-----FN-----GADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TTT-----SC-----HHHHHHHHGGGEEEEEEEEEES
T ss_pred CCh-----hh-----hHHHHHHHHHhcCCCeEEEEEC
Confidence 321 11 5789999999999999998854
No 218
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.04 E-value=1.8e-10 Score=119.24 Aligned_cols=107 Identities=12% Similarity=0.262 Sum_probs=88.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|+|..+.+|...+| ..+|++||++|.+++.|++++ |+ .++++++++|+.+++......
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~~~~~------ 131 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALDTLHSLLNE------ 131 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHHHHHHHHHH------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHhhc------
Confidence 457999999999999999999886 779999999999999999998 54 468999999999998775210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
.....||+|++|....+ ...+|+.+.+.|+|||++++.-
T Consensus 132 ---------------------~~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 132 ---------------------GGEHQFDFIFIDADKTN-------------YLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp ---------------------HCSSCEEEEEEESCGGG-------------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ---------------------cCCCCEeEEEEcCChHH-------------hHHHHHHHHHhcCCCeEEEEEC
Confidence 00257999999875221 2678999999999999999853
No 219
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.04 E-value=1.3e-10 Score=113.52 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccc---cCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVF---MDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~---~~~sfDvVi~~~ 143 (772)
.++.+|||+|||. +++|+|+.|++.|+++... +++|.++|+.+++ + ++++||+|++..
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~-~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLL-QSAHKESSFDIILSGL 71 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGG-GGCCCSSCEEEEEECC
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCc-cccCCCCCEeEEEECC
Confidence 6789999999996 2399999999999887632 4999999999998 6 789999999999
Q ss_pred ccccc-ccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 144 GLDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 144 ~l~~l-~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+++++ .+ ...++++++|+|||||++++..
T Consensus 72 ~l~~~~~~-------~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 72 VPGSTTLH-------SAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp STTCCCCC-------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcccC-------HHHHHHHHHHHCCCCEEEEEEc
Confidence 99998 44 3689999999999999999853
No 220
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=1e-09 Score=115.63 Aligned_cols=103 Identities=8% Similarity=0.022 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.|++++...+ .++.|+++|+.+.+ . .++||+|+....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c-cCCceEEEECCc
Confidence 46789999999999999999987 34579999999999999988775544 47899999999885 4 678999998654
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
. . ...++.++.++|+|||++++..+..
T Consensus 196 ~----~-------~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 196 H----K-------THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp S----S-------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c----c-------HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 3 1 3568899999999999999887664
No 221
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.04 E-value=6.5e-11 Score=121.96 Aligned_cols=97 Identities=13% Similarity=0.178 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc----CCCCcEEEEeeccCcccccCCCccEEEecc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR----DRSDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~----~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
++.+|||+|||+|.++..+++.|..+|+|+|+|+.|++.++++... ...++.+... .++ +...||.+....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL--ADF---EQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG--GGC---CSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH--hHc---CcCCCCEEEEEE
Confidence 4679999999999999999999876899999999999987654321 0112222221 111 111244443333
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
++..+ ..++++++|+|||||++++..
T Consensus 112 v~~~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 112 SFISL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp SSSCG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EhhhH----------HHHHHHHHHhccCCCEEEEEE
Confidence 33333 369999999999999999863
No 222
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.04 E-value=3.5e-10 Score=123.33 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhc--cCCCCcEEEEeeccCcccccCCCccEEEecc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV--RDRSDMRWRVMDMTSMQVFMDETFDVILDKG 143 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~--~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~ 143 (772)
.+..+|||+|||+|.++..+++.. ..+++++|+++ ++. +++.. ....+++|+.+|+. .+ ++ +||+|++..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~~~~~~~~~~~v~~~~~d~~-~~-~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RHRLDAPDVAGRWKVVEGDFL-RE-VP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TCCCCCGGGTTSEEEEECCTT-TC-CC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cccccccCCCCCeEEEecCCC-CC-CC--CCcEEEEeh
Confidence 467899999999999999998863 34699999954 444 22221 22347999999998 34 45 899999999
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++.+++ ..++|++++++|||||++++.+..
T Consensus 256 vlh~~~d~~-----~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 256 ILHNWGDED-----SVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CGGGSCHHH-----HHHHHHHHHHTCCTTCEEEEEECC
T ss_pred hccCCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 999986643 579999999999999999998754
No 223
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.03 E-value=7.2e-10 Score=122.85 Aligned_cols=132 Identities=13% Similarity=0.027 Sum_probs=94.3
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeec
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~ 125 (772)
||.+.......+..++ .++.+|||+|||+|.++..++..|.. |+++|+|+.+++.+++++...+....+.++|+
T Consensus 197 ~f~dqr~~r~~l~~~~-----~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~ 270 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMV-----RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEA 270 (393)
T ss_dssp SCGGGHHHHHHHHTTC-----CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCH
T ss_pred cCCCHHHHHHHHHHHh-----cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccH
Confidence 4444444455555544 35789999999999999999998875 99999999999999888765555557889999
Q ss_pred cCcccccCCCccEEEecccccccccCc--cchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 126 TSMQVFMDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 126 ~~l~~~~~~sfDvVi~~~~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
.+......+.||+|++......-.... ........++..+.++|+|||++++.+.+..
T Consensus 271 ~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 271 LPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp HHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 875312234499999764432111100 0011257899999999999999998877643
No 224
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.02 E-value=7.2e-10 Score=111.53 Aligned_cols=100 Identities=18% Similarity=0.292 Sum_probs=84.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|+|..+.++...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++....
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~-------- 125 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQR-------- 125 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCC--------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCC--------
Confidence 457999999999999999999887 789999999999999999887 44 4689999999998865432
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
. ||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 126 ------------------------~-fD~v~~~~~~~-------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 ------------------------D-IDILFMDCDVF-------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ------------------------S-EEEEEEETTTS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------------------------C-CCEEEEcCChh-------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 5 99999985322 1378999999999999999984
No 225
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.02 E-value=6.6e-10 Score=122.18 Aligned_cols=100 Identities=18% Similarity=0.096 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++ ..++++|+.+|+.+ + ++++ |+|++..++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~-~p~~--D~v~~~~vl 271 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----AFSGVEHLGGDMFD-G-VPKG--DAIFIKWIC 271 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-C-CCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----hcCCCEEEecCCCC-C-CCCC--CEEEEechh
Confidence 45689999999999999999886 3347999999 88886553 23689999999987 6 6654 999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
|++.+++ ..++|++++++|||||++++.++.
T Consensus 272 h~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 272 HDWSDEH-----CLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp GGBCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred hcCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 9886543 678999999999999999998764
No 226
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.02 E-value=2.7e-09 Score=109.16 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||.|.++..+. +...|+++||++.+++.+++.....+.+..+.++|....+ +.++||+|+..-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--PAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC--CCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC--CCCCcchHHHHHHHH
Confidence 357899999999999999887 5557999999999999999887666788999999999877 445999999998999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
++...+. ...+ .+...|+++|+++-..
T Consensus 180 ~LE~q~~-----~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQA-----GSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHST-----THHH-HHHHHCBCSEEEEEEE
T ss_pred Hhhhhch-----hhHH-HHHHHhcCCCEEEEcC
Confidence 8866442 2333 7888999999988764
No 227
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.02 E-value=6e-10 Score=123.30 Aligned_cols=132 Identities=19% Similarity=0.087 Sum_probs=94.9
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC---CcEEEE
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWRV 122 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~---~v~f~~ 122 (772)
+|.+.......+..++ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.|++++...+. +++|++
T Consensus 195 ff~~~~~~~~~~~~~~-----~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~ 269 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-----AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV 269 (385)
T ss_dssp SCGGGHHHHHHHHHTT-----TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred cCCcHHHHHHHHHHHh-----cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 4444445555566554 25689999999999999999998877899999999999999888765442 799999
Q ss_pred eeccCc-ccc--cCCCccEEEecccccccc--cCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 123 MDMTSM-QVF--MDETFDVILDKGGLDALM--EPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 123 ~D~~~l-~~~--~~~sfDvVi~~~~l~~l~--~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+|+.+. +.+ ...+||+|++........ ........+..++..+.++|+|||++++.+...
T Consensus 270 ~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 270 MDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999873 211 245899999754432110 001111226678899999999999999887654
No 228
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=5.8e-09 Score=105.74 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=88.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|.|..+.++...+| ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+++.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 134 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKDTLAELIH------- 134 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHHHHHHhhh-------
Confidence 457999999999999999999887 789999999999999999998 54 46799999999999876541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
......||+|++|.... ....+++.+.+.|+|||+|++.-+
T Consensus 135 --------------------~~~~~~fD~v~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 135 --------------------AGQAWQYDLIYIDADKA-------------NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp --------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred --------------------ccCCCCccEEEECCCHH-------------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 00125799999976422 126799999999999999998643
No 229
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.01 E-value=1.1e-09 Score=115.16 Aligned_cols=112 Identities=14% Similarity=0.192 Sum_probs=89.1
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCccc
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQV 130 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~ 130 (772)
..+...+.. .++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.++++..... .++++.++|+.+.
T Consensus 102 ~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 176 (277)
T 1o54_A 102 SFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-- 176 (277)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--
T ss_pred HHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--
Confidence 344445543 57889999999999999999987 4 4589999999999999988775544 3789999999875
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
+++++||+|++.. .. ...+++++.++|+|||++++.+....
T Consensus 177 ~~~~~~D~V~~~~-----~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~ 217 (277)
T 1o54_A 177 FDEKDVDALFLDV-----PD-------PWNYIDKCWEALKGGGRFATVCPTTN 217 (277)
T ss_dssp CSCCSEEEEEECC-----SC-------GGGTHHHHHHHEEEEEEEEEEESSHH
T ss_pred ccCCccCEEEECC-----cC-------HHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 4667899999732 22 24789999999999999999887543
No 230
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.01 E-value=6.3e-10 Score=110.19 Aligned_cols=108 Identities=23% Similarity=0.225 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CC---------CeEEEEeCCHHHHHHHHHHhccCCCCcEEE-EeeccCcc------
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GF---------HGITNVDFSKVVISDMLRRNVRDRSDMRWR-VMDMTSMQ------ 129 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~---------~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~-~~D~~~l~------ 129 (772)
.++.+|||+|||+|.++..+++. |. .+|+++|+|+.+ ...++++. ++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 46789999999999999999987 53 579999999821 12468899 99988754
Q ss_pred -cccCCCccEEEeccccccccc----CccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 130 -VFMDETFDVILDKGGLDALME----PELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 130 -~~~~~sfDvVi~~~~l~~l~~----~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
.+++++||+|++...+++... ..........+++++.++|||||++++.++....
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 024568999999776554221 1000111358999999999999999999886554
No 231
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.00 E-value=1.5e-10 Score=119.91 Aligned_cols=117 Identities=11% Similarity=0.043 Sum_probs=88.1
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
....++..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+ .+++++++|+.+
T Consensus 47 ~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 47 EQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444433 35689999999999999999985 2 3579999999999999988775443 479999999977
Q ss_pred ccccc-----CCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 128 MQVFM-----DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 128 l~~~~-----~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
..... +++||+|+...... . ...+++++.++|||||++++....
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~~~-----~-----~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDADKT-----N-----YLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESCGG-----G-----HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHhhccCCCCEeEEEEcCChH-----H-----hHHHHHHHHHhcCCCeEEEEECCc
Confidence 53011 58999998755311 1 567999999999999999986543
No 232
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.00 E-value=8e-10 Score=113.71 Aligned_cols=117 Identities=18% Similarity=0.114 Sum_probs=88.8
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMT 126 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~ 126 (772)
+.....+..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+. ++++.++|+.
T Consensus 46 ~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 46 PEEGQFLNILTKI---SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 3444555555543 46789999999999999999987 2 45899999999999999888754332 4899999987
Q ss_pred Cc-cc-------------ccC--CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 127 SM-QV-------------FMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 127 ~l-~~-------------~~~--~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
+. +. |++ ++||+|++...... ...+++++.++|+|||++++...
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN----------YPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG----------HHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHH----------HHHHHHHHHHHcCCCeEEEEEcc
Confidence 63 21 222 78999997653221 46899999999999999998763
No 233
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.00 E-value=5.5e-09 Score=113.72 Aligned_cols=158 Identities=17% Similarity=0.190 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEE
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVIL 140 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~------~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi 140 (772)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+....+.++.+.++|+.... ..+.||+|+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~--~~~~fD~Ii 206 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL--LVDPVDVVI 206 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC--CCCCEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc--ccCCccEEE
Confidence 3568999999999999998887631 47999999999999998876544457899999987743 567899999
Q ss_pred ecccccccccCcc----------ch-HHHHHHHHHHHhccccCeEEEEEEcCc---hhhhhcccccc-cCCcEEEEEEcC
Q 004133 141 DKGGLDALMEPEL----------GH-KLGNQYLSEVKRLLKSGGKFVCLTLAE---SHVLGLLFPKF-RFGWKMSVHAIP 205 (772)
Q Consensus 141 ~~~~l~~l~~~~~----------~~-~~~~~~l~ei~rvLkpGG~~ii~~~~~---~~~~~~l~~~~-~~~w~~~~~~~~ 205 (772)
++..+.++..++. +. .....+++.+.+.|+|||++++++... ......+.+.+ ..+|...+..++
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp 286 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLP 286 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCC
Confidence 9988766532110 00 012368999999999999998887221 00011122221 124544455554
Q ss_pred CCCCCCCCcceEEEEEEecCC
Q 004133 206 QKSSSEPSLQTFMVVADKENS 226 (772)
Q Consensus 206 ~~~~~~~~l~~f~~~~~K~~~ 226 (772)
...-.....+..+.+++|.+.
T Consensus 287 ~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 287 ETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp GGGSCC-CCCEEEEEEEECCT
T ss_pred hhhccCCCCceEEEEEECCCC
Confidence 321122345667777777553
No 234
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.00 E-value=7.3e-10 Score=115.07 Aligned_cols=102 Identities=15% Similarity=0.040 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc-ccc-----cCCCcc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QVF-----MDETFD 137 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l-~~~-----~~~sfD 137 (772)
++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+. +.+ .+++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 5679999999999999999886 2 3479999999999999988775443 3699999999764 312 267999
Q ss_pred EEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 138 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 138 vVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+|+...... . ...+++++.++|||||++++..
T Consensus 159 ~V~~d~~~~-----~-----~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDADKD-----N-----YLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSCST-----T-----HHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCchH-----H-----HHHHHHHHHHhCCCCeEEEEec
Confidence 999754311 1 5789999999999999998764
No 235
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.99 E-value=6.9e-10 Score=122.10 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.+..+|||+|||+|.++..+++.. ...++++|+ +.+++.+++ .++++|+++|+.+ + ++. ||+|++..++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~-~~~--~D~v~~~~~l 277 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-----LSGIEHVGGDMFA-S-VPQ--GDAMILKAVC 277 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----CTTEEEEECCTTT-C-CCC--EEEEEEESSG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----cCCCEEEeCCccc-C-CCC--CCEEEEeccc
Confidence 456899999999999999999874 346899999 888876632 3579999999988 6 564 9999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++.+++ ...+|++++++|||||++++.++.
T Consensus 278 h~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 278 HNWSDEK-----CIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 9886533 569999999999999999998754
No 236
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.99 E-value=1.5e-09 Score=119.10 Aligned_cols=101 Identities=19% Similarity=0.073 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++ ..++++|+.+|+.+ + ++.+ |+|++..++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~D~~~-~-~p~~--D~v~~~~vl 269 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----QFPGVTHVGGDMFK-E-VPSG--DTILMKWIL 269 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-C-CCCC--SEEEEESCG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----hcCCeEEEeCCcCC-C-CCCC--CEEEehHHh
Confidence 46789999999999999999886 3347999999 87876553 23689999999998 6 6754 999999999
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
|++.+++ ..++|++++++|||||++++.++..
T Consensus 270 h~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 270 HDWSDQH-----CATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp GGSCHHH-----HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9886543 6799999999999999999987653
No 237
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.99 E-value=1.2e-09 Score=118.48 Aligned_cols=108 Identities=14% Similarity=0.222 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccCc-ccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~l-~~~~~~sfDvVi 140 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++.. ..++++++++|+.+. +.+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4679999999999999999987 346899999999999999887642 246899999999874 213467999999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
+......... + ......+++++.++|+|||++++.
T Consensus 200 ~d~~~p~~~~-~--~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDSSDPIGPA-K--ELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECCCCTTSGG-G--GGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCccCcc-h--hhhHHHHHHHHHHhcCCCcEEEEe
Confidence 8553211111 1 001368999999999999999986
No 238
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.99 E-value=1.3e-09 Score=117.23 Aligned_cols=112 Identities=16% Similarity=0.144 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc------CCCCcEEEEeeccCc-ccccCCCccEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QVFMDETFDVI 139 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~------~~~~v~f~~~D~~~l-~~~~~~sfDvV 139 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++++.. ..++++++++|+.+. + ..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE-RTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH-HCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH-hcCCCccEE
Confidence 4579999999999999999987 456899999999999999887632 146899999999873 4 456899999
Q ss_pred EecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 140 LDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 140 i~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
++....+.........-....++++++++|||||++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 98765433000000000036899999999999999998753
No 239
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=1.2e-09 Score=115.76 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc------------CCCCcEEEEeeccCcccccCCC
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR------------DRSDMRWRVMDMTSMQVFMDET 135 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~------------~~~~v~f~~~D~~~l~~~~~~s 135 (772)
.+.+|||+|||+|.++..+++.+..+|+++|+++.+++.|++++ . ..++++++++|+.+.... +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 46799999999999999999886668999999999999998876 2 245799999998764202 678
Q ss_pred ccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 136 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 136 fDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
||+|++..... ...+.. .....+++++.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~-~~~~~~--l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDP-VGPAKV--LFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCC-C-------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCC-CCcchh--hhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999755432 111000 002678999999999999999875
No 240
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.99 E-value=1.7e-09 Score=114.13 Aligned_cols=110 Identities=20% Similarity=0.205 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccCc-ccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~l-~~~~~~sfDvVi 140 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++++|+.+. + ..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA-KSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH-TCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-hCCCCeeEEE
Confidence 4689999999999999999987 667899999999999999876522 246899999999873 3 3467899999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+........... -....+++++.++|+|||++++....
T Consensus 154 ~d~~~~~~~~~~---l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVN---LFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCC---CSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchh---hhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 855432211100 00257999999999999999987543
No 241
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.99 E-value=1.6e-10 Score=122.12 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc---CCCCcEEE--EeeccCcccccCCCccEEEe
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---DRSDMRWR--VMDMTSMQVFMDETFDVILD 141 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~---~~~~v~f~--~~D~~~l~~~~~~sfDvVi~ 141 (772)
.++.+|||+|||+|.++..+++. ..|+|+|+|+ |+..++++... ...++.|+ ++|+.+++ +++||+|++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~Vvs 154 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQADTVLC 154 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCSEEEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcCEEEE
Confidence 57889999999999999999988 4699999999 54333211100 01168999 99998865 679999999
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCe--EEEEEEcC
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 181 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG--~~ii~~~~ 181 (772)
... ++......+......+|+++.++||||| .|++..+.
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 766 3322211000001247899999999999 99998877
No 242
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.98 E-value=6e-10 Score=121.56 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++|..+|+.+ + ++. ||+|++..++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~-~p~--~D~v~~~~~l 256 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFT-S-IPN--ADAVLLKYIL 256 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTT-C-CCC--CSEEEEESCG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----CCCcEEEeccccC-C-CCC--ccEEEeehhh
Confidence 35689999999999999999987 3347999999 988876643 2469999999987 5 553 9999999999
Q ss_pred cccccCccchHHHHHHHHHHHhcccc---CeEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkp---GG~~ii~~~~ 181 (772)
+++.+++ ..++|++++++||| ||++++.++.
T Consensus 257 h~~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 257 HNWTDKD-----CLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp GGSCHHH-----HHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred ccCCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 9986532 56999999999999 9999998754
No 243
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.98 E-value=1.5e-09 Score=120.50 Aligned_cols=131 Identities=13% Similarity=0.078 Sum_probs=95.2
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC---CcEEEE
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWRV 122 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~---~v~f~~ 122 (772)
||.........+..+ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.|++++...+. +++|++
T Consensus 204 ff~~~~~~~~~l~~~------~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~ 277 (396)
T 3c0k_A 204 YYLDQRDSRLATRRY------VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVR 277 (396)
T ss_dssp SCGGGHHHHHHHHHH------CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCcCHHHHHHHHHHh------hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 454444444445544 25789999999999999999998877899999999999999888765544 789999
Q ss_pred eeccCcc-cc--cCCCccEEEecccccccccCc--cchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 123 MDMTSMQ-VF--MDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 123 ~D~~~l~-~~--~~~sfDvVi~~~~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+|+.+.. .+ ..++||+|+............ ........++.++.++|+|||++++.+...
T Consensus 278 ~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 278 DDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9998863 01 146899999864332111000 001226789999999999999999887654
No 244
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.98 E-value=1.2e-09 Score=129.81 Aligned_cols=129 Identities=17% Similarity=0.086 Sum_probs=96.3
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEE
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRV 122 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~---~~v~f~~ 122 (772)
||.+.......+..+. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++++...+ .+++|++
T Consensus 523 ~f~d~r~~r~~l~~~~------~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~ 596 (703)
T 3v97_A 523 LFLDHRIARRMLGQMS------KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 596 (703)
T ss_dssp CCGGGHHHHHHHHHHC------TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEE
T ss_pred CcccHHHHHHHHHHhc------CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEe
Confidence 5555555555555543 468999999999999999998888789999999999999988876554 3599999
Q ss_pred eeccCc-ccccCCCccEEEecccccccccC----ccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 123 MDMTSM-QVFMDETFDVILDKGGLDALMEP----ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 123 ~D~~~l-~~~~~~sfDvVi~~~~l~~l~~~----~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+|+.+. + ...++||+|++.......... .........++..+.++|+|||++++.+..
T Consensus 597 ~D~~~~l~-~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 597 ADCLAWLR-EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SCHHHHHH-HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCHHHHHH-hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 999883 4 456799999975532211100 011123778999999999999999977654
No 245
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.98 E-value=1.1e-09 Score=117.30 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccC-cccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTS-MQVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~-l~~~~~~sfDvVi 140 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++++.. ..++++++++|+.+ ++ ..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK-QNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH-TCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh-hCCCCceEEE
Confidence 4689999999999999999987 346899999999999999887643 25689999999987 34 4568899999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+......... . ......+++++.++|+|||++++..
T Consensus 174 ~d~~~~~~~~-~--~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPA-E--SLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC--------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcc-h--hhhHHHHHHHHHhccCCCeEEEEec
Confidence 8544321110 0 0013578999999999999999876
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.98 E-value=7.6e-10 Score=122.89 Aligned_cols=115 Identities=17% Similarity=0.115 Sum_probs=88.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcc-cc--cCCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ-VF--MDETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~-~~--~~~sfDvVi~~ 142 (772)
++.+|||+|||+|.++..++..|..+|+++|+|+.+++.|++++...+. +++|+++|+.+.. .+ ..++||+|+..
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 5789999999999999999998877899999999999999888765543 7999999998753 01 25789999975
Q ss_pred ccccccccCc--cchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 143 GGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 143 ~~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
.......... ........++.++.++|+|||++++++...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 4332211100 000226789999999999999999888764
No 247
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.98 E-value=1.4e-09 Score=115.25 Aligned_cols=110 Identities=16% Similarity=0.171 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC-----CCCcEEEEeeccCcccccCCCccEEEe
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSMQVFMDETFDVILD 141 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~-----~~~v~f~~~D~~~l~~~~~~sfDvVi~ 141 (772)
++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++.+... .++++++++|+.+.....+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 5689999999999999999887 3568999999999999998876432 468999999998742133678999998
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
........... .....+++.+.++|+|||++++...
T Consensus 158 d~~~~~~~~~~---l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAET---LFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGG---GSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchh---hhHHHHHHHHHHhcCCCcEEEEECC
Confidence 55432211110 0016899999999999999998753
No 248
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.97 E-value=1.6e-09 Score=110.18 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=87.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
..+.+||.||+|.|.++..+...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~~~~~~~------ 139 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALETLDELLA------ 139 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHH------
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHHHHHHHh------
Confidence 3467999999999999999999877 679999999999999999998 54 46899999999998876541
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
......||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 140 ---------------------~~~~~~~D~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 140 ---------------------AGEAGTFDVAVVDADKE-------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp ---------------------TTCTTCEEEEEECSCST-------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 00015799999976422 1268999999999999999984
No 249
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.97 E-value=2e-09 Score=113.55 Aligned_cols=120 Identities=12% Similarity=0.071 Sum_probs=93.6
Q ss_pred cccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEe
Q 004133 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVM 123 (772)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~ 123 (772)
|+......+..+..++ .++.+|||+|||+|.++..++..|..+|+++|+++.+++.++++...++ ..+++.++
T Consensus 108 f~~~~~~er~ri~~~~-----~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 108 FSPANVKERVRMAKVA-----KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHC-----CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhc-----CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 4444444455566666 4689999999999999999999987789999999999999988775544 36899999
Q ss_pred eccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 124 DMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 124 D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
|+.++. ..+.||.|+...... ...++..+.++||+||++.+..+...
T Consensus 183 D~~~~~--~~~~~D~Vi~~~p~~-----------~~~~l~~a~~~lk~gG~ih~~~~~~e 229 (278)
T 3k6r_A 183 DNRDFP--GENIADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNTVPE 229 (278)
T ss_dssp CTTTCC--CCSCEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cHHHhc--cccCCCEEEECCCCc-----------HHHHHHHHHHHcCCCCEEEEEeeecc
Confidence 999986 568899998653221 23577888899999999887766543
No 250
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.97 E-value=1.2e-09 Score=109.29 Aligned_cols=160 Identities=10% Similarity=0.071 Sum_probs=94.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.+|+|+|.++..+....|..++++||+++.+++.|++.+..... +++++.+|+.+.+.....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~---------- 97 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAE---------- 97 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHH----------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhh----------
Confidence 456799999999999999999999888999999999999999998854322 789999999997665220
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC-----------------cHHHHHHHHHccCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-----------------EGSFLLTVKDALSEQ 683 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~-----------------~~~fl~~~~~~L~~~ 683 (772)
...+||+|++|.--... ..+...+.... -..+++.+++.|+||
T Consensus 98 -------------------~~~~fD~i~~npp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 98 -------------------RGRPWHAIVSNPPYIPT-GEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp -------------------TTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred -------------------ccCcccEEEECCCCCCC-ccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 12579999995311000 00000001110 178999999999999
Q ss_pred cE-EEEEecCCChhHHHHHHHHHHHhccceEEEeecCCceEEEEEecCC
Q 004133 684 GL-FIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 684 Gi-lv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
|. +++.+..........++..+..-|..+.......+...++++.+..
T Consensus 158 G~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 158 RAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp SEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred CeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 99 7776654444443333443345577666666556667888887654
No 251
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.96 E-value=1.5e-09 Score=116.46 Aligned_cols=110 Identities=17% Similarity=0.121 Sum_probs=84.0
Q ss_pred CeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeeccCcc-cccCCCccEEEeccccc
Q 004133 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-VFMDETFDVILDKGGLD 146 (772)
Q Consensus 70 ~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~-~~~v~f~~~D~~~l~-~~~~~sfDvVi~~~~l~ 146 (772)
.+|||||||+|.++..+++. +..+|++||+++.+++.+++.+... .++++++++|+.++. .+++++||+|+......
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 59999999999999999984 3347999999999999998887432 468999999998752 14568999999754332
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
...... -....++++++++|+|||+|++.....
T Consensus 171 ~~~~~~---L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 171 AITPQN---FTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp SCCCGG---GSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred cccchh---hhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 211100 002689999999999999999877643
No 252
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.96 E-value=6.6e-10 Score=115.21 Aligned_cols=126 Identities=10% Similarity=0.045 Sum_probs=82.1
Q ss_pred hHHHHHHHhhcCCCC--CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecc
Q 004133 52 QLRDPLISLIGAPTS--SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMT 126 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~--~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~ 126 (772)
.....+...+..... .++.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|+++....+. +++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344455555543211 14679999999999999988876 224799999999999999888755433 4999999987
Q ss_pred Cc---cccc---CCCccEEEecccccccccC-cc-----c--hHHHHHHHHHHHhccccCeEEEEE
Q 004133 127 SM---QVFM---DETFDVILDKGGLDALMEP-EL-----G--HKLGNQYLSEVKRLLKSGGKFVCL 178 (772)
Q Consensus 127 ~l---~~~~---~~sfDvVi~~~~l~~l~~~-~~-----~--~~~~~~~l~ei~rvLkpGG~~ii~ 178 (772)
+. + ++ +++||+|+++..++..... .. - ......++.+++++|||||.+.++
T Consensus 127 ~~~~~~-~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 127 TLLMDA-LKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CSSTTT-STTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhh-hhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 62 3 44 3689999998665543200 00 0 001235678899999999987655
No 253
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.96 E-value=1.8e-09 Score=110.74 Aligned_cols=108 Identities=17% Similarity=0.282 Sum_probs=88.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|.|..+.++...+| ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~------- 142 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQ------- 142 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457999999999999999999887 679999999999999999987 55 46899999999998877541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
......||+|++|.+.. -...+++.+.+.|+|||++++.-+
T Consensus 143 --------------------~~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 143 --------------------GKPLPEFDLIFIDADKR-------------NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp --------------------SSSCCCEEEEEECSCGG-------------GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred --------------------cCCCCCcCEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 00015799999986422 127799999999999999998643
No 254
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.96 E-value=1e-09 Score=116.53 Aligned_cols=90 Identities=14% Similarity=0.249 Sum_probs=72.7
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l 128 (772)
+.+...+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++..... .+++++++|+.++
T Consensus 14 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3455556666654 5788999999999999999999875 79999999999999988774332 4799999999988
Q ss_pred ccccCCCccEEEecccccc
Q 004133 129 QVFMDETFDVILDKGGLDA 147 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~ 147 (772)
+ ++ +||+|+++..++.
T Consensus 90 ~-~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 90 D-LP--FFDTCVANLPYQI 105 (285)
T ss_dssp C-CC--CCSEEEEECCGGG
T ss_pred c-ch--hhcEEEEecCccc
Confidence 7 54 7999999765544
No 255
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=1.6e-10 Score=121.30 Aligned_cols=108 Identities=14% Similarity=0.074 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhc---cCCCCcEEE--EeeccCcccccCCCccEEEe
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNV---RDRSDMRWR--VMDMTSMQVFMDETFDVILD 141 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~---~~~~~v~f~--~~D~~~l~~~~~~sfDvVi~ 141 (772)
.++.+|||+|||+|.++..+++. ..|+|+|+|+ |+..++++.. ....++.|+ ++|+.+++ +++||+|++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~V~s 146 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP---VERTDVIMC 146 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---CCCCSEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---CCCCcEEEE
Confidence 57889999999999999999988 4699999999 5332211110 011168999 99999865 679999999
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCe--EEEEEEcC
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 181 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG--~~ii~~~~ 181 (772)
... ++......+......+|+++.++||||| .|++..+.
T Consensus 147 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 766 4332211000001238899999999999 99998887
No 256
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.96 E-value=1.4e-09 Score=116.96 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC-----CCCcEEEEeeccCc-ccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM-QVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~-----~~~v~f~~~D~~~l-~~~~~~sfDvVi 140 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++... .++++++++|+.+. + ..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~-~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK-NHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH-HCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH-hcCCCceEEE
Confidence 4579999999999999999987 4568999999999999998876432 46899999999873 3 3567899999
Q ss_pred ecccccccccCccchHHH-HHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~-~~~l~ei~rvLkpGG~~ii~~ 179 (772)
+... +.+.... ... ..+++++.++|+|||++++..
T Consensus 187 ~d~~-~~~~~~~---~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAE---SLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-----------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcch---hhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 7553 2221111 112 689999999999999999865
No 257
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.96 E-value=4.1e-09 Score=107.34 Aligned_cols=133 Identities=15% Similarity=0.172 Sum_probs=98.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|+|.++..+....|...|++||+++.+++.|++...-..-.+++++.+|+.+++...-
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~------------ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI------------ 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc------------
Confidence 45789999999999999999999999999999999999999988521112469999999999877532
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 701 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 701 (772)
....||.|++.. +++..........++...|++.+.+.|+|||+|++-. ....+.+.+
T Consensus 102 ------------------~~~~~d~v~~~~--~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t--d~~~~~~~~ 159 (218)
T 3dxy_A 102 ------------------PDNSLRMVQLFF--PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT--DWEPYAEHM 159 (218)
T ss_dssp ------------------CTTCEEEEEEES--CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE--SCHHHHHHH
T ss_pred ------------------CCCChheEEEeC--CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe--CCHHHHHHH
Confidence 136799999843 2221111112234667789999999999999998754 455555555
Q ss_pred HHHHHHh
Q 004133 702 ISRMKMV 708 (772)
Q Consensus 702 ~~~l~~v 708 (772)
+..+...
T Consensus 160 ~~~~~~~ 166 (218)
T 3dxy_A 160 LEVMSSI 166 (218)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 5555543
No 258
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.96 E-value=2.3e-09 Score=114.40 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccCc-ccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~l-~~~~~~sfDvVi 140 (772)
.+.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++++.. ..++++++++|+.+. + ..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR-KFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG-GCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-hCCCCceEEE
Confidence 4579999999999999999987 556899999999999999877532 246899999998873 4 4567899999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+...-.+...... .....+++++.++|+|||++++.+.+
T Consensus 169 ~d~~~~~~~~~~~--l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGH--LFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhh--hhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 7533211111000 00268999999999999999987543
No 259
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.96 E-value=2.2e-09 Score=115.79 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccCc-ccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~l-~~~~~~sfDvVi 140 (772)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++.. ..++++++++|+.+. + ..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE-NVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH-HCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh-hcCCCceEEE
Confidence 4579999999999999999987 456899999999999999887643 146799999999874 3 3467899999
Q ss_pred ecccccccccCccchHHH-HHHHHHHHhccccCeEEEEEEcC
Q 004133 141 DKGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~-~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+... +...... ... ..+++++.++|+|||++++...+
T Consensus 195 ~d~~-~p~~~~~---~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSS-DPIGPAE---TLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECC-CSSSGGG---GGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCc-CCCCcch---hhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 7543 2111100 111 68999999999999999987543
No 260
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.95 E-value=1.5e-09 Score=110.47 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=87.4
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
....++..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+ .+++++++|+.+
T Consensus 56 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 56 EQAQLLANLARL---IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 344445444433 35789999999999999999986 2 4579999999999999988775443 479999999876
Q ss_pred cc-cccC----CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEc
Q 004133 128 MQ-VFMD----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 180 (772)
Q Consensus 128 l~-~~~~----~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~ 180 (772)
.. .+.+ ++||+|++.... .. ...+++++.++|+|||++++...
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~-----~~-----~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADK-----EN-----CSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCS-----TT-----HHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhcCCCCCccEEEECCCH-----HH-----HHHHHHHHHHHcCCCeEEEEECC
Confidence 41 1222 789999975431 11 56899999999999999998653
No 261
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.95 E-value=4.2e-09 Score=111.69 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCc---cEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETF---DVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sf---DvVi~~ 142 (772)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|+++....+. +++|+++|+.+. ++ ++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~--~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP--FK-EKFASIEMILSN 199 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG--GG-GGTTTCCEEEEC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh--cc-cccCCCCEEEEc
Confidence 4679999999999999999887335799999999999999888755443 499999999874 23 579 999997
Q ss_pred cccccccc---Cc--cchHH-------HHHHHHHHH-hccccCeEEEEEE
Q 004133 143 GGLDALME---PE--LGHKL-------GNQYLSEVK-RLLKSGGKFVCLT 179 (772)
Q Consensus 143 ~~l~~l~~---~~--~~~~~-------~~~~l~ei~-rvLkpGG~~ii~~ 179 (772)
........ ++ ..+.. -..+++++. +.|+|||++++..
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 32211100 00 00000 126899999 9999999998753
No 262
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.94 E-value=1.6e-09 Score=111.79 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=100.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
+..+|||||||.|-++..++.. +...|+++|+++.|++.+++++...+....+.+.|...-+ +.+.||+|++.-+++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDEPADVTLLLKTLP 209 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCSCCSEEEETTCHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC--CCCCcchHHHHHHHH
Confidence 4679999999999999988777 5568999999999999999888777778999999998765 678999999999999
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEEc---Cch--hhhh---ccccc-cc-CCcEEEEEEcCC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL---AES--HVLG---LLFPK-FR-FGWKMSVHAIPQ 206 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~---~~~--~~~~---~l~~~-~~-~~w~~~~~~~~~ 206 (772)
++.+.. ....+ ++...|+++|.++-..- +.. -+.. ..+.. .. .+|.+.-..+.+
T Consensus 210 ~Le~q~-----kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~n 273 (281)
T 3lcv_B 210 CLETQQ-----RGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGN 273 (281)
T ss_dssp HHHHHS-----TTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred Hhhhhh-----hHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecC
Confidence 997654 23555 89999999999887543 222 2222 22222 22 478777766654
No 263
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.92 E-value=2.7e-09 Score=109.98 Aligned_cols=103 Identities=13% Similarity=0.030 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCc-ccc-----cCCCc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSM-QVF-----MDETF 136 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l-~~~-----~~~sf 136 (772)
.++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.++++....+. +++++++|+.+. +.+ .+++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 35679999999999999999886 2 35799999999999999887754433 589999999874 212 25789
Q ss_pred cEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 137 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 137 DvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
|+|+...... ....+++.+.++|+|||++++..
T Consensus 149 D~I~~d~~~~----------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP----------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG----------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH----------HHHHHHHHHHHhcCCCeEEEEec
Confidence 9998653211 15789999999999999998764
No 264
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.92 E-value=2.7e-09 Score=109.44 Aligned_cols=117 Identities=15% Similarity=0.047 Sum_probs=86.4
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccC
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~ 127 (772)
.....+..++.. .++.+|||+|||+|..+..++.. + ..+|+++|+|+.+++.|+++....+ .++++.++|+.+
T Consensus 59 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 59 EQAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444432 35679999999999999999986 2 3479999999999999987764332 368999999865
Q ss_pred c-cc--ccC--CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 128 M-QV--FMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 128 l-~~--~~~--~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
. +. ..+ ++||+|++..... . ...+++++.++|+|||++++....
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~~~-----~-----~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDADKR-----N-----YPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSCGG-----G-----HHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHhcCCCCCcCEEEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEeCCC
Confidence 2 21 223 7899999754311 1 578999999999999999986544
No 265
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.92 E-value=2.7e-09 Score=108.37 Aligned_cols=112 Identities=9% Similarity=0.156 Sum_probs=85.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|.|.++.++...++ ..+|++||++|.+++.|++++ |+ +++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~l~~~~~------- 128 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQDLIPQLKK------- 128 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHGGGTTT-------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHHHHHHHHH-------
Confidence 467999999999999999998765 679999999999999999987 54 46899999999998766431
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
......||+|++|...... .-..++++.+ +.|+|||+|++.-+..
T Consensus 129 --------------------~~~~~~fD~V~~d~~~~~~----------~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 129 --------------------KYDVDTLDMVFLDHWKDRY----------LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp --------------------TSCCCCCSEEEECSCGGGH----------HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred --------------------hcCCCceEEEEEcCCcccc----------hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 0112579999997532210 0123567777 9999999999865443
No 266
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.90 E-value=9.4e-09 Score=107.43 Aligned_cols=159 Identities=14% Similarity=0.123 Sum_probs=106.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC---C-CCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---T-QDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~---~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.||+|+|.++..|....|..+|++||+++.+++.|++.+.. . -.++++++.+|..+++......
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~----- 109 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA----- 109 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT-----
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh-----
Confidence 345689999999999999999999888999999999999999999754 2 2357999999998875432100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeC-CCCCCCCCCCcCCc---------CCCcHHHHHHHHHccCCCcEE
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDV-DSPDSSSGMTCPAA---------DFVEGSFLLTVKDALSEQGLF 686 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~-~~~d~~~g~s~Pp~---------~f~~~~fl~~~~~~L~~~Gil 686 (772)
.....+||+|+++. +.... +..+|.. ...-..+++.+.+.|+|+|.|
T Consensus 110 ---------------------~~~~~~fD~Vv~nPPy~~~~--~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 166 (260)
T 2ozv_A 110 ---------------------GLPDEHFHHVIMNPPYNDAG--DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQL 166 (260)
T ss_dssp ---------------------TCCTTCEEEEEECCCC-----------------------CCHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------ccCCCCcCEEEECCCCcCCC--CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEE
Confidence 00135799999962 11000 1111110 012468999999999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHhccceEEEee----cCCceEEEEEecC
Q 004133 687 IVNLVSRSQATKDMVISRMKMVFNHLFCLQL----EEDVNLVLFGLSS 730 (772)
Q Consensus 687 v~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~----~~~~N~vl~a~~~ 730 (772)
++-... . ....++..+++.|..+....+ ....+.+++....
T Consensus 167 ~~~~~~--~-~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k 211 (260)
T 2ozv_A 167 SLISRP--Q-SVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLVTAIK 211 (260)
T ss_dssp EEEECG--G-GHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEEEcH--H-HHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEEEEEe
Confidence 985432 2 335567777776764443332 3346777766543
No 267
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.90 E-value=3.5e-09 Score=116.66 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCCC-CcEEEEeeccC-cccc-cCCCccEEEecc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRS-DMRWRVMDMTS-MQVF-MDETFDVILDKG 143 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~~-~v~f~~~D~~~-l~~~-~~~sfDvVi~~~ 143 (772)
++.+|||+| |+|.++..++..+. .+|+++|+|+.|++.|+++....+. +++|+++|+.+ ++ . .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~-~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLP-DYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCC-TTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhch-hhccCCccEEEECC
Confidence 578999999 99999999988865 6899999999999999888754333 79999999998 66 3 357899999876
Q ss_pred cccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 144 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 144 ~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
.+... . ...+++++.++|||||++++.+
T Consensus 250 p~~~~-~-------~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 250 PETLE-A-------IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CSSHH-H-------HHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCchH-H-------HHHHHHHHHHHcccCCeEEEEE
Confidence 55432 1 4789999999999999553333
No 268
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.90 E-value=1.1e-08 Score=111.67 Aligned_cols=106 Identities=15% Similarity=0.115 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeeccCcccccCCCccEEEeccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQVFMDETFDVILDKGG 144 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~-~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~ 144 (772)
.+..+|||+|||+|.++..+++. +..+++..|. +.+++.++++.... ..+++|+.+|+.+.+ .+ .+|+|+...+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~-~~--~~D~~~~~~v 253 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP-LP--EADLYILARV 253 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-CC--CCSEEEEESS
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-CC--CceEEEeeee
Confidence 45679999999999999999987 3346888897 78999998776432 357999999998765 43 5799999999
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
||.+.+++ ..++|+++++.|+|||++++++..
T Consensus 254 lh~~~d~~-----~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 254 LHDWADGK-----CSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred cccCCHHH-----HHHHHHHHHhhCCCCCEEEEEEee
Confidence 99886643 678999999999999999998754
No 269
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.89 E-value=7.6e-09 Score=116.79 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=90.9
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCccc-
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQV- 130 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~- 130 (772)
..+...+.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+ .++++.++|+.+++.
T Consensus 249 ~l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 249 AVASIVLDP---KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS
T ss_pred HHHHHhcCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh
Confidence 334455554 57889999999999999999885 32579999999999999988875544 379999999988752
Q ss_pred ccCCCccEEEec------cccccccc------CccchH---HHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 131 FMDETFDVILDK------GGLDALME------PELGHK---LGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 131 ~~~~sfDvVi~~------~~l~~l~~------~~~~~~---~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+++++||+|++. +++....+ +++-.. ....+++++.++|||||++++++++-
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 344789999962 33322111 010000 12678999999999999999988653
No 270
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.88 E-value=4.1e-09 Score=107.74 Aligned_cols=104 Identities=16% Similarity=0.272 Sum_probs=87.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
.+.+||.||+|.|.++..+...+|..+|++||+++.+++.|++.+ |+ .++++++.+|+.+++....
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~--------- 122 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQLGEKLE--------- 122 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGGSHHHHT---------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhcc---------
Confidence 456999999999999999999998889999999999999999987 44 4679999999988766542
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
....||+|++|.... ....+|+.+.+.|+|||++++.-
T Consensus 123 ---------------------~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 123 ---------------------LYPLFDVLFIDAAKG-------------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp ---------------------TSCCEEEEEEEGGGS-------------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ---------------------cCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 025699999976432 23789999999999999999873
No 271
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.87 E-value=5.4e-09 Score=107.42 Aligned_cols=116 Identities=15% Similarity=0.274 Sum_probs=87.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+.+||.||+|.|.++.++...+| ..+|++||++|.+++.|++++ |+ +++++++.+|+.+++.......
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~~----- 132 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALETLQVLIDSK----- 132 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHCS-----
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHHHHHHHhhc-----
Confidence 457999999999999999999987 679999999999999999997 44 4579999999999877542100
Q ss_pred ccccccccccCCCCCCCCCCCCCC--CceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASN--ARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~--~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
+ ++........ ..||+|++|.... .-..+|+.+.+.|+|||++++..
T Consensus 133 ------------~-~~~~~~~f~~~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 133 ------------S-APSWASDFAFGPSSIDLFFLDADKE-------------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp ------------S-CCGGGTTTCCSTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ------------c-cccccccccCCCCCcCEEEEeCCHH-------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 0 0000001112 5799999974321 11588999999999999999875
No 272
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.86 E-value=7.6e-09 Score=116.09 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=92.9
Q ss_pred HHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc-
Q 004133 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV- 130 (772)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~-~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~- 130 (772)
....+...+.. .++.+|||+|||+|..+..++..+. ..|+++|+|+.+++.++++....+.++++.++|+.+++.
T Consensus 234 ~s~~~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 234 SAQGCMTWLAP---QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 (429)
T ss_dssp HHHTHHHHHCC---CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH
T ss_pred HHHHHHHHcCC---CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh
Confidence 33444555554 6788999999999999999998742 579999999999999988876656678999999988751
Q ss_pred ccCCCccEEEec------cccccccc------Cccc---hHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 131 FMDETFDVILDK------GGLDALME------PELG---HKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 131 ~~~~sfDvVi~~------~~l~~l~~------~~~~---~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++++||+|++. +++....+ +++- ......+++++.++|||||++++.+.+
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 345789999963 22222111 0000 011258899999999999999998854
No 273
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.86 E-value=3.1e-09 Score=116.18 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .++++|+.+|+.+ + ++ .||+|++..+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~-~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-----NENLNFVGGDMFK-S-IP--SADAVLLKWVLH 262 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-----CSSEEEEECCTTT-C-CC--CCSEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-----CCCcEEEeCccCC-C-CC--CceEEEEccccc
Confidence 45799999999999999999873 346999999 678865532 3469999999988 6 65 499999999999
Q ss_pred ccccCccchHHHHHHHHHHHhcccc---CeEEEEEEcC
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 181 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkp---GG~~ii~~~~ 181 (772)
++.+++ ..++|++++++|+| ||++++.++.
T Consensus 263 ~~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 263 DWNDEQ-----SLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp GSCHHH-----HHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 886533 56999999999999 9999998754
No 274
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.85 E-value=9.1e-09 Score=111.71 Aligned_cols=99 Identities=9% Similarity=0.081 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~--~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.+++++...+ .+++++++|+.+.. ++||+|++....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMNLPK 268 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEECCTT
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEECCcH
Confidence 578999999999999999 77 56689999999999999988876554 36999999998753 789999974321
Q ss_pred cccccCccchHHHHHHHHHHHhccccCeEEEEEEcCch
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 183 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~ 183 (772)
. ...+++.+.++|+|||++++.++...
T Consensus 269 ~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 269 F-----------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp T-----------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred h-----------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 1 23688999999999999999887654
No 275
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.85 E-value=2.9e-09 Score=120.03 Aligned_cols=124 Identities=16% Similarity=0.161 Sum_probs=90.6
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccccc
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFM 132 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~ 132 (772)
..+...+.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+..+.+.++|+.+++.+.
T Consensus 91 ~l~a~~L~~---~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 91 QAVGVLLDP---KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH
T ss_pred HHHHHhcCc---CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc
Confidence 334455554 57899999999999999999976 2247999999999999998887654444899999998876234
Q ss_pred CCCccEEEec------ccccccccC------ccc---hHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 133 DETFDVILDK------GGLDALMEP------ELG---HKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 133 ~~sfDvVi~~------~~l~~l~~~------~~~---~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++||+|++. +++..-.+. ++- .....++++++.++|||||++++.|.+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 6899999952 222211110 000 011378999999999999999998765
No 276
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.85 E-value=1.6e-08 Score=102.06 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=93.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|+|.++..+....|..++++||+++.+++.|++......-++++++.+|+.++.....
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 108 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE------------ 108 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC------------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC------------
Confidence 45789999999999999999999989999999999999999988621111579999999876321111
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 701 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 701 (772)
...||+|+++.. ++...-.-.+..+....+++.+.+.|+|||++++.. ........+
T Consensus 109 -------------------~~~~D~i~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~--~~~~~~~~~ 165 (214)
T 1yzh_A 109 -------------------DGEIDRLYLNFS--DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT--DNRGLFEYS 165 (214)
T ss_dssp -------------------TTCCSEEEEESC--CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE--SCHHHHHHH
T ss_pred -------------------CCCCCEEEEECC--CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe--CCHHHHHHH
Confidence 356999998632 211000000122456899999999999999999864 334444555
Q ss_pred HHHHHHh
Q 004133 702 ISRMKMV 708 (772)
Q Consensus 702 ~~~l~~v 708 (772)
++.+.+.
T Consensus 166 ~~~~~~~ 172 (214)
T 1yzh_A 166 LVSFSQY 172 (214)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 5555543
No 277
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.85 E-value=2.7e-09 Score=117.96 Aligned_cols=114 Identities=15% Similarity=0.085 Sum_probs=85.9
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cc--cCCCccEEEecc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VF--MDETFDVILDKG 143 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~--~~~sfDvVi~~~ 143 (772)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...+ .+++|+++|+.+.. .+ .+++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4679999999999999999987 5579999999999999988875544 35999999998763 01 157899999754
Q ss_pred cccccccCc--cchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 144 GLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 144 ~l~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
......... ........++..+.++|+|||++++.+...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 332211100 001226789999999999999999988664
No 278
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.84 E-value=1.8e-08 Score=99.45 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=84.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.+|+|+|.++..+... +..+|++||+|+.+++.|++.+....-++++++.+|+.+++....
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 110 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT------------ 110 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc------------
Confidence 4578999999999999877664 455899999999999999998722111579999999999976643
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC---CcHHHHHHHHH--ccCCCcEEEEEecCCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF---VEGSFLLTVKD--ALSEQGLFIVNLVSRS 694 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f---~~~~fl~~~~~--~L~~~Gilv~Nl~~~~ 694 (772)
..+||+|++|. |-.. .-..+++.+.+ .|+|||++++....+.
T Consensus 111 -------------------~~~fD~i~~~~------------p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 111 -------------------TSPVDLVLADP------------PYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp -------------------SSCCSEEEECC------------CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred -------------------CCCccEEEECC------------CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 36799999953 1111 13678899988 9999999999876543
No 279
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.84 E-value=2.7e-08 Score=100.63 Aligned_cols=132 Identities=11% Similarity=0.130 Sum_probs=94.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|.|.++..|....|..++++||+++.+++.|++...-..-++++++.+|+.++.....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~------------ 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE------------ 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC------------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC------------
Confidence 45789999999999999999999999999999999999999987621112569999999988432222
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 701 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 701 (772)
...||.|++....+.... .--...+....+++.+.+.|+|||.|++-. ........+
T Consensus 106 -------------------~~~~d~v~~~~~~p~~~~--~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t--d~~~~~~~~ 162 (213)
T 2fca_A 106 -------------------PGEVKRVYLNFSDPWPKK--RHEKRRLTYSHFLKKYEEVMGKGGSIHFKT--DNRGLFEYS 162 (213)
T ss_dssp -------------------TTSCCEEEEESCCCCCSG--GGGGGSTTSHHHHHHHHHHHTTSCEEEEEE--SCHHHHHHH
T ss_pred -------------------cCCcCEEEEECCCCCcCc--cccccccCcHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHH
Confidence 256999987542211100 000123557899999999999999999764 344455555
Q ss_pred HHHHHHh
Q 004133 702 ISRMKMV 708 (772)
Q Consensus 702 ~~~l~~v 708 (772)
+..+.+.
T Consensus 163 ~~~~~~~ 169 (213)
T 2fca_A 163 LKSFSEY 169 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 6666554
No 280
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.84 E-value=1.8e-08 Score=98.69 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=101.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|.|.++..+... ..++++||+++.+++.|++.+ ++ .+.+++++.+|..+++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~~~~d~~~~~~------------ 116 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLYENVK------------ 116 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC-TTSCEEEEECSTTTTCT------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECchhcccc------------
Confidence 4578999999999999988887 569999999999999999987 43 12269999999866421
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
...||+|+++.--. ...-....+++.+.+.|+|||.+++....... .
T Consensus 117 ----------------------~~~~D~v~~~~~~~---------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~ 163 (194)
T 1dus_A 117 ----------------------DRKYNKIITNPPIR---------AGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG--A 163 (194)
T ss_dssp ----------------------TSCEEEEEECCCST---------TCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH--H
T ss_pred ----------------------cCCceEEEECCCcc---------cchhHHHHHHHHHHHHcCCCCEEEEEECCCCC--h
Confidence 25699999842100 00012368999999999999999998865532 3
Q ss_pred HHHHHHHHHhccceEEEeecCCceEEEEEe
Q 004133 699 DMVISRMKMVFNHLFCLQLEEDVNLVLFGL 728 (772)
Q Consensus 699 ~~v~~~l~~vF~~v~~~~~~~~~N~vl~a~ 728 (772)
..+.+.+++.|..+..+... ....++++.
T Consensus 164 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~ 192 (194)
T 1dus_A 164 KSLAKYMKDVFGNVETVTIK-GGYRVLKSK 192 (194)
T ss_dssp HHHHHHHHHHHSCCEEEEEE-TTEEEEEEE
T ss_pred HHHHHHHHHHhcceEEEecC-CcEEEEEEe
Confidence 45678888889877766533 345555554
No 281
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.84 E-value=1.6e-09 Score=116.00 Aligned_cols=108 Identities=17% Similarity=0.132 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeC----CHHHHHHHHHHhccC-CCCcEEEEe-eccCcccccCCCccEEE
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF----SKVVISDMLRRNVRD-RSDMRWRVM-DMTSMQVFMDETFDVIL 140 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDi----S~~~I~~a~~~~~~~-~~~v~f~~~-D~~~l~~~~~~sfDvVi 140 (772)
.++.+|||+|||+|.++..+++. ..|+|+|+ ++.+++.+ ..... .+++.|+++ |+.+++ .++||+|+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~---~~~fD~V~ 153 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP---PERCDTLL 153 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC---CCCCSEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC---cCCCCEEE
Confidence 46789999999999999999988 36999999 56443211 01111 146899998 888765 46899999
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
+...++ ......+......+|..+.++|||||.|++..+..
T Consensus 154 sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 154 CDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 977654 11100000001258899999999999999977765
No 282
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.83 E-value=1.2e-08 Score=101.84 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=91.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.+.+..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~---------- 105 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPEGLDD---------- 105 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTTTCTT----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhhhhhc----------
Confidence 3457899999999999999999998889999999999999999886 54 6799999998654322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
...||+|+++.... .-..+++.+.+.|+|||.+++..... ..
T Consensus 106 -----------------------~~~~D~i~~~~~~~-------------~~~~~l~~~~~~LkpgG~l~~~~~~~--~~ 147 (204)
T 3e05_A 106 -----------------------LPDPDRVFIGGSGG-------------MLEEIIDAVDRRLKSEGVIVLNAVTL--DT 147 (204)
T ss_dssp -----------------------SCCCSEEEESCCTT-------------CHHHHHHHHHHHCCTTCEEEEEECBH--HH
T ss_pred -----------------------CCCCCEEEECCCCc-------------CHHHHHHHHHHhcCCCeEEEEEeccc--cc
Confidence 14599999854221 23789999999999999999986543 23
Q ss_pred HHHHHHHHHHh
Q 004133 698 KDMVISRMKMV 708 (772)
Q Consensus 698 ~~~v~~~l~~v 708 (772)
...+...+++.
T Consensus 148 ~~~~~~~l~~~ 158 (204)
T 3e05_A 148 LTKAVEFLEDH 158 (204)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 34455556554
No 283
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.83 E-value=2.9e-08 Score=111.86 Aligned_cols=173 Identities=14% Similarity=0.170 Sum_probs=114.2
Q ss_pred ccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--------------CCCeEEEEeCCHHHHHHHHHH
Q 004133 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------------GFHGITNVDFSKVVISDMLRR 110 (772)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--------------g~~~V~gvDiS~~~I~~a~~~ 110 (772)
++|. ...+...+.+.+.. .++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.+
T Consensus 152 ~fyT-P~~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 152 QYFT-PRPLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp GGCC-CHHHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred cccC-cHHHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 4443 35667777777764 56789999999999999887763 123699999999999999876
Q ss_pred hccCCC---CcEEEEeeccCcccccCCCccEEEecccccccccCccc----------hHHHHHHHHHHHhccccCeEEEE
Q 004133 111 NVRDRS---DMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELG----------HKLGNQYLSEVKRLLKSGGKFVC 177 (772)
Q Consensus 111 ~~~~~~---~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~----------~~~~~~~l~ei~rvLkpGG~~ii 177 (772)
...++. +..+.++|....+ . ...||+|+++..+......... ......+++.+.++|||||++.+
T Consensus 228 l~l~g~~~~~~~i~~gD~l~~~-~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 228 LYLHGIGTDRSPIVCEDSLEKE-P-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp HHHTTCCSSCCSEEECCTTTSC-C-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCcCCCCEeeCCCCCCc-c-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 644443 6789999998876 3 3589999998777654322100 00124789999999999999988
Q ss_pred EEcC----c----hhhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEecCC
Q 004133 178 LTLA----E----SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 226 (772)
Q Consensus 178 ~~~~----~----~~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~~ 226 (772)
+... . ..+++.++... +...+..++...-.....+..+.+++|.+.
T Consensus 306 V~p~~~L~~~~~~~~iR~~L~~~~---~l~~ii~lp~~~F~~t~v~t~Il~~~k~~~ 359 (445)
T 2okc_A 306 VLPDNVLFEAGAGETIRKRLLQDF---NLHTILRLPTGIFYAQGVKANVLFFSKGQP 359 (445)
T ss_dssp EEEHHHHHCSTHHHHHHHHHHHHE---EEEEEEECCSSSSSSTTCCEEEEEEEESSC
T ss_pred EECCcccccCcHHHHHHHHHHhcC---cEEEEEeCCCCCccCCCCCEEEEEEECCCC
Confidence 8732 1 12232333321 222333444211123456778888888654
No 284
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.83 E-value=9.9e-09 Score=109.60 Aligned_cols=89 Identities=20% Similarity=0.303 Sum_probs=67.9
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeeccCcc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ 129 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~-~~~v~f~~~D~~~l~ 129 (772)
+.+...+...+.. .++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.++++.... .++++++++|+.+++
T Consensus 28 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 28 PGILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 3455556666654 5778999999999999999998864 7999999999999998876433 257999999999877
Q ss_pred cccCCCccEEEeccccc
Q 004133 130 VFMDETFDVILDKGGLD 146 (772)
Q Consensus 130 ~~~~~sfDvVi~~~~l~ 146 (772)
+ ++||+|+++...+
T Consensus 104 -~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 -F--PKFDVCTANIPYK 117 (299)
T ss_dssp -C--CCCSEEEEECCGG
T ss_pred -c--ccCCEEEEcCCcc
Confidence 4 4899999876554
No 285
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.83 E-value=6.2e-09 Score=109.07 Aligned_cols=95 Identities=14% Similarity=0.209 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeeccCcccccCCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQVFMDETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~-----~~~~v~f~~~D~~~l~~~~~~sfDvVi~~ 142 (772)
.+.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++.+.. ..++++++.+|+.+.. ++||+|+..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEEC
Confidence 45799999999999999998887 7899999999999998765422 2467999999988743 789999975
Q ss_pred ccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 143 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 143 ~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
. .++ ..+++.+.++|+|||++++..
T Consensus 147 ~-----~dp-------~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 Q-----EPD-------IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S-----CCC-------HHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----CCh-------HHHHHHHHHhcCCCcEEEEEc
Confidence 2 222 248999999999999999864
No 286
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.82 E-value=4.2e-08 Score=95.13 Aligned_cols=126 Identities=11% Similarity=0.051 Sum_probs=91.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+...+|..+|++||+++.+++.|++.+.-. .++++ ++.+|+.+.+...
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~----------- 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV----------- 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC-----------
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc-----------
Confidence 3456899999999999999999988889999999999999999886321 23478 8889986643331
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHH
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 699 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 699 (772)
...||+|+++..-. ...+++.+.+.|+|||.+++...... ...
T Consensus 92 ---------------------~~~~D~i~~~~~~~--------------~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~ 134 (178)
T 3hm2_A 92 ---------------------PDNPDVIFIGGGLT--------------APGVFAAAWKRLPVGGRLVANAVTVE--SEQ 134 (178)
T ss_dssp ---------------------CSCCSEEEECC-TT--------------CTTHHHHHHHTCCTTCEEEEEECSHH--HHH
T ss_pred ---------------------CCCCCEEEECCccc--------------HHHHHHHHHHhcCCCCEEEEEeeccc--cHH
Confidence 15699999732110 17899999999999999998876442 223
Q ss_pred HHHHHHHHhccceEEE
Q 004133 700 MVISRMKMVFNHLFCL 715 (772)
Q Consensus 700 ~v~~~l~~vF~~v~~~ 715 (772)
.+...+++...++..+
T Consensus 135 ~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 135 MLWALRKQFGGTISSF 150 (178)
T ss_dssp HHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHcCCeeEEE
Confidence 3455555554444433
No 287
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.81 E-value=1.6e-08 Score=114.70 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=85.9
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccCCCccEEEec--
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMDETFDVILDK-- 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~~sfDvVi~~-- 142 (772)
++.+|||+|||+|..+..++.. + ...|+++|+|+.+++.++++....+ .++.++++|+.+++...+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7889999999999999999986 2 3579999999999999988875433 479999999998761256789999973
Q ss_pred ----ccccccccCc--cch-------HHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 143 ----GGLDALMEPE--LGH-------KLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 143 ----~~l~~l~~~~--~~~-------~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+++....+.. ..+ ....++|+++.++|||||++++.+.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 2222111100 000 11357899999999999999998865
No 288
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.80 E-value=1.9e-08 Score=103.00 Aligned_cols=109 Identities=10% Similarity=-0.009 Sum_probs=82.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|+|.++..|....+ .+|++||+++.+++.|++..... ..+++++.+|+.+.+....
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~----------- 125 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDVAPTLP----------- 125 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHHGGGSC-----------
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc-CCCeEEEecCHHHhhcccC-----------
Confidence 3457899999999999999976543 38999999999999999987432 3679999999988754432
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC-cHHHHHHHHHccCCCcEEEE
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~-~~~fl~~~~~~L~~~Gilv~ 688 (772)
+..||+|++|.+.. . .+..+.- -..+++.+++.|+|||+|++
T Consensus 126 --------------------~~~fD~V~~d~~~~-~-----~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 126 --------------------DGHFDGILYDTYPL-S-----EETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp --------------------TTCEEEEEECCCCC-B-----GGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred --------------------CCceEEEEECCccc-c-----hhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 36799999975432 1 1111111 13679999999999999985
No 289
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.79 E-value=2e-08 Score=103.37 Aligned_cols=119 Identities=12% Similarity=0.155 Sum_probs=89.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|+|.++..|....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.....
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~--------- 137 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKD--------- 137 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTT---------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhccccc---------
Confidence 457899999999999998988888889999999999999999875 54 359999999987631100
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
...+||+|+++.... -..+++.+.+.|+|||.|++-.........
T Consensus 138 ---------------------~~~~fD~V~~~~~~~--------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~ 182 (240)
T 1xdz_A 138 ---------------------VRESYDIVTARAVAR--------------LSVLSELCLPLVKKNGLFVALKAASAEEEL 182 (240)
T ss_dssp ---------------------TTTCEEEEEEECCSC--------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHH
T ss_pred ---------------------ccCCccEEEEeccCC--------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHH
Confidence 025799999865211 278999999999999999986433333333
Q ss_pred HHHHHHHHH
Q 004133 699 DMVISRMKM 707 (772)
Q Consensus 699 ~~v~~~l~~ 707 (772)
..+...++.
T Consensus 183 ~~~~~~l~~ 191 (240)
T 1xdz_A 183 NAGKKAITT 191 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444455544
No 290
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.79 E-value=2.3e-08 Score=111.34 Aligned_cols=120 Identities=23% Similarity=0.282 Sum_probs=89.0
Q ss_pred chhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecc
Q 004133 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (772)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~ 126 (772)
....+...+.+++.. .++.+|||+|||+|.++..+++. +..+++|+|+++.+++.| .++++.++|+.
T Consensus 23 TP~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~ 91 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADFL 91 (421)
T ss_dssp CCHHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCGG
T ss_pred CCHHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCChh
Confidence 345677777777753 35679999999999999999875 345799999999888655 47899999999
Q ss_pred CcccccCCCccEEEecccccccccC--------ccch--------------HHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 127 SMQVFMDETFDVILDKGGLDALMEP--------ELGH--------------KLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 127 ~l~~~~~~sfDvVi~~~~l~~l~~~--------~~~~--------------~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
+.. +.+.||+|+++..+...... +... .....+++.+.++|+|||+++++...
T Consensus 92 ~~~--~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 92 LWE--PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp GCC--CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred hcC--ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 876 45789999997554332210 0000 01337799999999999999888743
No 291
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.78 E-value=2.9e-08 Score=103.37 Aligned_cols=153 Identities=14% Similarity=0.174 Sum_probs=98.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.||+|.|.++..+....+. +|++||+++.+++.|++.+... -.++++++.+|..++.....
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~----------- 116 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP----------- 116 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC-----------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc-----------
Confidence 5679999999999999999988765 9999999999999999987322 24689999999988754322
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcC---------CCcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAAD---------FVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~-~d~~~g~s~Pp~~---------f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..+||+|++|.-- .....+..+|... ..-..+++.+.+.|+|||.|++-.
T Consensus 117 --------------------~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 117 --------------------KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp --------------------TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3679999995311 0001122222111 112579999999999999999843
Q ss_pred cCCChhHHHHHHHHHHHh-ccceE--EEe--ecCCceEEEEEec
Q 004133 691 VSRSQATKDMVISRMKMV-FNHLF--CLQ--LEEDVNLVLFGLS 729 (772)
Q Consensus 691 ~~~~~~~~~~v~~~l~~v-F~~v~--~~~--~~~~~N~vl~a~~ 729 (772)
+... ...++..+++. |.-.. .+. .....+.+++...
T Consensus 177 --~~~~-~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 177 --RPER-LLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGI 217 (259)
T ss_dssp --CTTT-HHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEE
T ss_pred --cHHH-HHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEE
Confidence 2222 23456666653 33221 121 1334566666543
No 292
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.76 E-value=3.6e-08 Score=101.93 Aligned_cols=122 Identities=20% Similarity=0.309 Sum_probs=95.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|.++..+... .|..+|++||++|.+++.|++.+ |+ +++++++.+|+.+. ..
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 159 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYEG---IE------- 159 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGGC---CC-------
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhhc---cC-------
Confidence 45678999999999999999988 67889999999999999999987 65 46799999998753 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 696 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 696 (772)
...||+|++|... | ..+++.+.+.|+|||.+++...+. .
T Consensus 160 ------------------------~~~~D~v~~~~~~---------~------~~~l~~~~~~L~~gG~l~~~~~~~--~ 198 (255)
T 3mb5_A 160 ------------------------EENVDHVILDLPQ---------P------ERVVEHAAKALKPGGFFVAYTPCS--N 198 (255)
T ss_dssp ------------------------CCSEEEEEECSSC---------G------GGGHHHHHHHEEEEEEEEEEESSH--H
T ss_pred ------------------------CCCcCEEEECCCC---------H------HHHHHHHHHHcCCCCEEEEEECCH--H
Confidence 2569999995421 1 568999999999999999876433 3
Q ss_pred HHHHHHHHHHHh---ccceEEE
Q 004133 697 TKDMVISRMKMV---FNHLFCL 715 (772)
Q Consensus 697 ~~~~v~~~l~~v---F~~v~~~ 715 (772)
....+.+.+++. |..+..+
T Consensus 199 ~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 199 QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHHHHHHHHTGGGBSCCEEE
T ss_pred HHHHHHHHHHHcCCCccccEEE
Confidence 344566777666 7655444
No 293
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.76 E-value=1.5e-08 Score=114.09 Aligned_cols=125 Identities=14% Similarity=0.046 Sum_probs=90.3
Q ss_pred HHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccc
Q 004133 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVF 131 (772)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~ 131 (772)
..+...+.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+ .++.+.++|+.++..+
T Consensus 95 ~l~~~~L~~---~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 95 MIVGTAAAA---KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred HHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 344555554 57899999999999999999876 33579999999999999988775443 3689999999887523
Q ss_pred cCCCccEEEecccc---cccccCcc--------c----hHHHHHHHHHHHhccccCeEEEEEEcCc
Q 004133 132 MDETFDVILDKGGL---DALMEPEL--------G----HKLGNQYLSEVKRLLKSGGKFVCLTLAE 182 (772)
Q Consensus 132 ~~~sfDvVi~~~~l---~~l~~~~~--------~----~~~~~~~l~ei~rvLkpGG~~ii~~~~~ 182 (772)
.+++||+|++.... ..+....+ . ......+|+++.++|||||++++.|.+-
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 46899999964321 11111000 0 0113488999999999999999987653
No 294
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.76 E-value=5e-08 Score=99.11 Aligned_cols=156 Identities=11% Similarity=0.114 Sum_probs=100.6
Q ss_pred CCCCeEEEEccc-ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLG-AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG-~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+| +|.++..+.... ..+|++||+|+.+++.|++.+....- +++++.+|+..+ ...
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~~~----------- 119 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII-KGV----------- 119 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS-TTT-----------
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh-hhc-----------
Confidence 356799999999 999999998885 56999999999999999988732111 799999997422 111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCC-CCCCCCCcCCcCC--------CcHHHHHHHHHccCCCcEEEEEe
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSP-DSSSGMTCPAADF--------VEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~-d~~~g~s~Pp~~f--------~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...+||+|+++.--. ........|...+ ....+++.+.+.|+|||.+++.+
T Consensus 120 --------------------~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 120 --------------------VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp --------------------CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 136799999863110 0000000000000 12789999999999999999976
Q ss_pred cCCChhHHHHHHHHHHHhccceEEEeecC--CceEEEEEecCC
Q 004133 691 VSRSQATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGLSSE 731 (772)
Q Consensus 691 ~~~~~~~~~~v~~~l~~vF~~v~~~~~~~--~~N~vl~a~~~~ 731 (772)
..+. .....+.+.+++..-.+..++... ....++...+.+
T Consensus 180 ~~~~-~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 180 PDKE-KLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp ESCH-HHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEECCC
T ss_pred cccH-hHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEeccc
Confidence 5443 344566777777644555555433 345555555443
No 295
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.74 E-value=4.6e-08 Score=102.37 Aligned_cols=102 Identities=12% Similarity=0.212 Sum_probs=79.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC--CCCcEEEEEcCHHHHHHHHHhcC-CCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM--PFVGIEAVELDLTMLNLAEDYFG-FTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~--p~~~i~~VEiDp~v~~vA~~~Fg-~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|+|.++..|++.+ |+.+|++||++|.|++.|++.+. .....+++++.+|..++ .
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~----~-------- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI----A-------- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----C--------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----c--------
Confidence 345789999999999999998876 46799999999999999999862 22356899999997543 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc----HHHHHHHHHccCCCcEEEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~----~~fl~~~~~~L~~~Gilv~N 689 (772)
...||+|++-. . -+++. ..+|+.+++.|+|||+|++-
T Consensus 137 -----------------------~~~~d~v~~~~--~----------l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 137 -----------------------IENASMVVLNF--T----------LQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----------------------CCSEEEEEEES--C----------GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------------ccccccceeee--e----------eeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 24599998721 1 12221 46899999999999999874
No 296
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.74 E-value=2.9e-08 Score=96.67 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=85.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++..+... +..+|++||+++.+++.|++.+... ..++++++.+|+.+++....
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 98 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT----------- 98 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC-----------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc-----------
Confidence 4578999999999999988877 5569999999999999999987432 13579999999999876532
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc-CCCcHHHHHHHH--HccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA-DFVEGSFLLTVK--DALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~-~f~~~~fl~~~~--~~L~~~Gilv~Nl~~~~ 694 (772)
..||+|++|. |- .....++++.+. +.|+|||++++......
T Consensus 99 ---------------------~~fD~i~~~~------------~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 ---------------------GRFDLVFLDP------------PYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---------------------SCEEEEEECC------------SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---------------------CCCCEEEECC------------CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 4599999852 11 112367788887 88999999999886554
No 297
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.73 E-value=7.3e-08 Score=101.40 Aligned_cols=141 Identities=14% Similarity=0.081 Sum_probs=101.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
...+||.+|+|.|..+..|...+++ .+|++||+++.+++.+++.. |+ ++++++.+|+.++......
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~------- 152 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLLK------- 152 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHHH-------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhhh-------
Confidence 4568999999999999999998776 79999999999999999886 54 3799999999988654210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC----------cCCCcHHHHHHHHHccCCCcEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA----------ADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp----------~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
....||+|++|+-.+. .|+.-.. ..-....+|+.+.+.|+|||.++
T Consensus 153 ----------------------~~~~fD~Vl~d~Pcs~--~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 208 (274)
T 3ajd_A 153 ----------------------NEIFFDKILLDAPCSG--NIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELV 208 (274)
T ss_dssp ----------------------TTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccccCCEEEEcCCCCC--CcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 0256999999863321 1111000 00134789999999999999999
Q ss_pred EEecCCChhHHHHHHHHHHHhccceEEEe
Q 004133 688 VNLVSRSQATKDMVISRMKMVFNHLFCLQ 716 (772)
Q Consensus 688 ~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~ 716 (772)
+...+......+.++..+.+.++.....+
T Consensus 209 ~stcs~~~~ene~~v~~~l~~~~~~~~~~ 237 (274)
T 3ajd_A 209 YSTCSMEVEENEEVIKYILQKRNDVELII 237 (274)
T ss_dssp EEESCCCTTSSHHHHHHHHHHCSSEEEEC
T ss_pred EEECCCChHHhHHHHHHHHHhCCCcEEec
Confidence 98876665555667777666555544333
No 298
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.73 E-value=4.2e-08 Score=100.99 Aligned_cols=133 Identities=14% Similarity=0.129 Sum_probs=92.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC------CCCCCCeEEEEccHHHHHHhhcccCcc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG------FTQDKSLKVHITDGIKFVREMKSSSAT 614 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg------~~~~~rl~v~i~Dg~~~l~~~~~~~~~ 614 (772)
....+||.||+|.|.++..|+..+|...|++||+++.+++.|++... ....++++++.+|+.+++...-
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~----- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF----- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC-----
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC-----
Confidence 45578999999999999999999999999999999999999986531 0123579999999988665421
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 615 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
....||.|++....+.... .-.-..+....+|+.+.+.|+|||.|++.. ..
T Consensus 120 -------------------------~~~~~D~v~~~~~dp~~k~--~h~krr~~~~~~l~~~~~~LkpGG~l~~~t--d~ 170 (235)
T 3ckk_A 120 -------------------------YKGQLTKMFFLFPDPHFKR--TKHKWRIISPTLLAEYAYVLRVGGLVYTIT--DV 170 (235)
T ss_dssp -------------------------CTTCEEEEEEESCC-------------CCCHHHHHHHHHHEEEEEEEEEEE--SC
T ss_pred -------------------------CCcCeeEEEEeCCCchhhh--hhhhhhhhhHHHHHHHHHHCCCCCEEEEEe--CC
Confidence 1357999987432211000 000123456799999999999999999765 34
Q ss_pred hhHHHHHHHHHHH
Q 004133 695 QATKDMVISRMKM 707 (772)
Q Consensus 695 ~~~~~~v~~~l~~ 707 (772)
..+...+++.+..
T Consensus 171 ~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 171 LELHDWMCTHFEE 183 (235)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 4544545555544
No 299
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.73 E-value=6.8e-08 Score=99.76 Aligned_cols=129 Identities=19% Similarity=0.281 Sum_probs=92.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc-----------CCCCCCCeEEEEccHHHHHHhhcc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----------GFTQDKSLKVHITDGIKFVREMKS 610 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----------g~~~~~rl~v~i~Dg~~~l~~~~~ 610 (772)
...+||.||+|.|.++..+....|..+|++||+++.+++.|++.+ ++ ++++++.+|+.+++...-
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---~nv~~~~~D~~~~l~~~~- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF---QNINVLRGNAMKFLPNFF- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT---TTEEEEECCTTSCGGGTS-
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC---CcEEEEeccHHHHHHHhc-
Confidence 457899999999999999999999889999999999999998765 33 479999999988665421
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 611 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
....+|.|++...++.... .---..++...++..+.+.|+|||+|++..
T Consensus 125 -----------------------------~~~~~d~v~~~~p~p~~k~--~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 125 -----------------------------EKGQLSKMFFCFPDPHFKQ--RKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp -----------------------------CTTCEEEEEEESCCCC--------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------------cccccCEEEEECCCccccc--chhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 1356898887542221000 000123456899999999999999999843
Q ss_pred cCCChhHHHHHHHHHHH
Q 004133 691 VSRSQATKDMVISRMKM 707 (772)
Q Consensus 691 ~~~~~~~~~~v~~~l~~ 707 (772)
....+.+.+.+.+..
T Consensus 174 --d~~~~~~~~~~~~~~ 188 (246)
T 2vdv_E 174 --DVKDLHEWMVKHLEE 188 (246)
T ss_dssp --SCHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHh
Confidence 344444444444433
No 300
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.73 E-value=4.6e-08 Score=109.43 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEeccccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGLD 146 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~ 146 (772)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++...+..++|.++|+.++. +. +||+|+......
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~--~~-~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS--VK-GFDTVIVDPPRA 364 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC--CT-TCSEEEECCCTT
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC--cc-CCCEEEEcCCcc
Confidence 3678999999999999999998754 7999999999999998877544334999999999875 23 899999754321
Q ss_pred ccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 147 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 147 ~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
.+ ...+++.+. .|+|||++++..
T Consensus 365 g~---------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 365 GL---------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CS---------CHHHHHHHH-HHCCSEEEEEES
T ss_pred ch---------HHHHHHHHH-hcCCCcEEEEEC
Confidence 11 124555554 489999887753
No 301
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.72 E-value=3.5e-08 Score=102.18 Aligned_cols=85 Identities=13% Similarity=0.210 Sum_probs=66.6
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVF 131 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~ 131 (772)
.+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++... .++++++++|+.+++ +
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~-~ 90 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFK-F 90 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCC-C
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCC-c
Confidence 444445555543 578899999999999999999987 4799999999999999887643 468999999999988 6
Q ss_pred cC-CCccEEEecc
Q 004133 132 MD-ETFDVILDKG 143 (772)
Q Consensus 132 ~~-~sfDvVi~~~ 143 (772)
++ ..| .|+++.
T Consensus 91 ~~~~~~-~vv~nl 102 (244)
T 1qam_A 91 PKNQSY-KIFGNI 102 (244)
T ss_dssp CSSCCC-EEEEEC
T ss_pred ccCCCe-EEEEeC
Confidence 64 456 455543
No 302
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.72 E-value=1.3e-07 Score=95.09 Aligned_cols=115 Identities=9% Similarity=-0.006 Sum_probs=88.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+... ..+|++||+++.+++.|++.. |+ +++++++.+|+.+.+..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~---------- 119 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAALAD---------- 119 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGGGTT----------
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhhccc----------
Confidence 34578999999999999998887 569999999999999999885 54 34799999998775332
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
...||+|+++. . + +.++++.+.+.|+|||.+++..... +.
T Consensus 120 -----------------------~~~~D~v~~~~--~-----~--------~~~~l~~~~~~LkpgG~lv~~~~~~--~~ 159 (204)
T 3njr_A 120 -----------------------LPLPEAVFIGG--G-----G--------SQALYDRLWEWLAPGTRIVANAVTL--ES 159 (204)
T ss_dssp -----------------------SCCCSEEEECS--C-----C--------CHHHHHHHHHHSCTTCEEEEEECSH--HH
T ss_pred -----------------------CCCCCEEEECC--c-----c--------cHHHHHHHHHhcCCCcEEEEEecCc--cc
Confidence 13599999853 1 1 1339999999999999999987643 33
Q ss_pred HHHHHHHHHHhc
Q 004133 698 KDMVISRMKMVF 709 (772)
Q Consensus 698 ~~~v~~~l~~vF 709 (772)
...+...+++.-
T Consensus 160 ~~~~~~~l~~~g 171 (204)
T 3njr_A 160 ETLLTQLHARHG 171 (204)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhCC
Confidence 344556665553
No 303
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.72 E-value=2.4e-08 Score=104.20 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=100.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-------CCC-----CcEEEEEcCH--------------HHHHHHHHhcC-------
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-------MPF-----VGIEAVELDL--------------TMLNLAEDYFG------- 587 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-------~p~-----~~i~~VEiDp--------------~v~~vA~~~Fg------- 587 (772)
..+.+||.||.|+|.....+... .|. .++++||.+| .+.++|++.+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 45679999999999655554332 563 5899999998 34446665532
Q ss_pred ------CC-CCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCC
Q 004133 588 ------FT-QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGM 660 (772)
Q Consensus 588 ------~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~ 660 (772)
+. ...+++++++|+.+.+..... .....||+|++|.+++..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~----------------------------~~~~~~D~iflD~fsp~~---- 186 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDD----------------------------SLNQKVDAWFLDGFAPAK---- 186 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCG----------------------------GGTTCEEEEEECSSCTTT----
T ss_pred chhheeccCCceEEEEEECcHHHHHhhccc----------------------------ccCCeEEEEEECCCCccc----
Confidence 21 125788999999999877531 001369999999887632
Q ss_pred CcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHHHHHHHHh-ccceEEEeecCCceEEEEEecCC
Q 004133 661 TCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 661 s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
.+.+++.++|+.+.++|+|||+|+. ++.+.. +...|+++ |. +...+-...-..++.+.+..
T Consensus 187 ---~p~lw~~~~l~~l~~~L~pGG~l~t--ysaa~~----vrr~L~~aGF~-v~~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 187 ---NPDMWTQNLFNAMARLARPGGTLAT--FTSAGF----VRRGLQEAGFT-MQKRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp ---CGGGCCHHHHHHHHHHEEEEEEEEE--SCCBHH----HHHHHHHHTEE-EEEECCSTTCCCEEEEEEC-
T ss_pred ---ChhhcCHHHHHHHHHHcCCCcEEEE--EeCCHH----HHHHHHHCCCE-EEeCCCCCCCCceEEEEecC
Confidence 4588999999999999999999994 455444 34455555 54 44444333344566666544
No 304
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.71 E-value=2.2e-07 Score=104.38 Aligned_cols=131 Identities=8% Similarity=0.127 Sum_probs=88.2
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccC----c
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS----M 128 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~----l 128 (772)
...+..++.. .++.+|||+|||+|.++..|+..+ .+|+|+|+|+.+++.|++++...+ .+++|+++|+.+ +
T Consensus 275 ~~~~~~~l~~---~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 275 VARALEWLDV---QPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ 350 (433)
T ss_dssp HHHHHHHHTC---CTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS
T ss_pred HHHHHHhhcC---CCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh
Confidence 3344455543 467899999999999999999884 479999999999999988775444 379999999988 3
Q ss_pred ccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhhcccccccCCcEEEE
Q 004133 129 QVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSV 201 (772)
Q Consensus 129 ~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~ 201 (772)
+ +.+++||+|++......+ ..+++.+.+ ++|++.+++ +.....+.+.+......+|.+..
T Consensus 351 ~-~~~~~fD~Vv~dPPr~g~----------~~~~~~l~~-~~p~~ivyv-sc~p~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 351 P-WAKNGFDKVLLDPARAGA----------AGVMQQIIK-LEPIRIVYV-SCNPATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp G-GGTTCCSEEEECCCTTCC----------HHHHHHHHH-HCCSEEEEE-ESCHHHHHHHHHHHHHTTCEEEE
T ss_pred h-hhcCCCCEEEECCCCccH----------HHHHHHHHh-cCCCeEEEE-ECChHHHHhhHHHHHHCCcEEEE
Confidence 4 566789999974322211 234444443 678776554 44434443333222233666554
No 305
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.71 E-value=3.4e-08 Score=105.10 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=75.3
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+...+.. .++.+|||+|||+|.++..|++.+. +|+++|+++.+++.+++++. ..++++++++|+.+++
T Consensus 36 ~~i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~- 109 (295)
T 3gru_A 36 KNFVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVD- 109 (295)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSC-
T ss_pred HHHHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCC-
Confidence 4555666666654 5788999999999999999999864 79999999999999988875 4568999999999998
Q ss_pred ccCCCccEEEeccccc
Q 004133 131 FMDETFDVILDKGGLD 146 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~ 146 (772)
+++.+||+|+++..++
T Consensus 110 ~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp GGGSCCSEEEEECCGG
T ss_pred cccCCccEEEEeCccc
Confidence 8888899999875543
No 306
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.71 E-value=1e-08 Score=105.70 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=78.9
Q ss_pred CCeEEEEcccccHHHHHHHHh----CCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHH--HHhhcccCcccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHEC----MPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKSSSATDE 616 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~----~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~--l~~~~~~~~~~~ 616 (772)
+.+||.||+|.|.++..|.+. .|..+|++||++|.+++.|+ ++ .++++++++|+.++ +....
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~---~~--~~~v~~~~gD~~~~~~l~~~~------- 149 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA---SD--MENITLHQGDCSDLTTFEHLR------- 149 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG---GG--CTTEEEEECCSSCSGGGGGGS-------
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh---cc--CCceEEEECcchhHHHHHhhc-------
Confidence 479999999999999998887 57789999999999999998 22 36899999998764 32221
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHH-ccCCCcEEEEEe
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD-ALSEQGLFIVNL 690 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~-~L~~~Gilv~Nl 690 (772)
...||+|++|.... --..+|..+.+ .|+|||+|++.-
T Consensus 150 ------------------------~~~fD~I~~d~~~~-------------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 ------------------------EMAHPLIFIDNAHA-------------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp ------------------------SSCSSEEEEESSCS-------------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ------------------------cCCCCEEEECCchH-------------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 23699999976421 12678999997 999999999854
No 307
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.71 E-value=8.2e-08 Score=99.71 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=89.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|+|.++..|...+|..+|++||+++.+++.|++.. |+ .+++++.+|+.++.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~-------- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAG-------- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTT--------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccc--------
Confidence 3567899999999999999999999999999999999999999876 55 349999999988732210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
...+||+|+...... -..+++.+.+.|+|||.|++-......+.
T Consensus 148 ----------------------~~~~fD~I~s~a~~~--------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 191 (249)
T 3g89_A 148 ----------------------HREAYARAVARAVAP--------------LCVLSELLLPFLEVGGAAVAMKGPRVEEE 191 (249)
T ss_dssp ----------------------TTTCEEEEEEESSCC--------------HHHHHHHHGGGEEEEEEEEEEECSCCHHH
T ss_pred ----------------------cCCCceEEEECCcCC--------------HHHHHHHHHHHcCCCeEEEEEeCCCcHHH
Confidence 125799999854321 16899999999999999887543333333
Q ss_pred HHHHHHHHHH
Q 004133 698 KDMVISRMKM 707 (772)
Q Consensus 698 ~~~v~~~l~~ 707 (772)
...+...++.
T Consensus 192 ~~~~~~~l~~ 201 (249)
T 3g89_A 192 LAPLPPALER 201 (249)
T ss_dssp HTTHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333344433
No 308
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.70 E-value=8.2e-08 Score=108.20 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=105.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|..+..|...++. .+|++||+++.+++.|++.. |+ . +.++.+|+.++.....
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~~------- 168 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAFG------- 168 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHHC-------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhcc-------
Confidence 34578999999999999999988865 69999999999999999875 65 3 8999999998754332
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC--------------CcHHHHHHHHHccCC
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 682 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f--------------~~~~fl~~~~~~L~~ 682 (772)
..||+|++|+-.+. .|+....++. +..++|+.+.+.|+|
T Consensus 169 -------------------------~~FD~Il~D~PcSg--~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 169 -------------------------TYFHRVLLDAPCSG--EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp -------------------------SCEEEEEEECCCCC--GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred -------------------------ccCCEEEECCCcCC--ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 57999999984431 2322222221 137899999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhccceEEE
Q 004133 683 QGLFIVNLVSRSQATKDMVISRMKMVFNHLFCL 715 (772)
Q Consensus 683 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~ 715 (772)
||.|++...+-..+..+.++..+.+-++.....
T Consensus 222 GG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 222 GGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLE 254 (464)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEE
T ss_pred CcEEEEEeccCchhcCHHHHHHHHHHCCCcEEE
Confidence 999999888777777778888887777654333
No 309
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.70 E-value=1.5e-07 Score=91.86 Aligned_cols=119 Identities=19% Similarity=0.245 Sum_probs=90.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.+|+|.|.++..+.... .+|++||+++.+++.|++.+... .+++++++.+|..+.+...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----------- 98 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI----------- 98 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-----------
Confidence 455799999999999999998886 69999999999999999876221 2368999999988754331
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHH
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 699 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 699 (772)
..||+|+++..- .. -..+++.+.+.|+|||.+++.... .....
T Consensus 99 ----------------------~~~D~v~~~~~~-----------~~--~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~ 141 (192)
T 1l3i_A 99 ----------------------PDIDIAVVGGSG-----------GE--LQEILRIIKDKLKPGGRIIVTAIL--LETKF 141 (192)
T ss_dssp ----------------------CCEEEEEESCCT-----------TC--HHHHHHHHHHTEEEEEEEEEEECB--HHHHH
T ss_pred ----------------------CCCCEEEECCch-----------HH--HHHHHHHHHHhcCCCcEEEEEecC--cchHH
Confidence 369999985211 11 288999999999999999988754 33344
Q ss_pred HHHHHHHHh-c
Q 004133 700 MVISRMKMV-F 709 (772)
Q Consensus 700 ~v~~~l~~v-F 709 (772)
.+.+.+++. |
T Consensus 142 ~~~~~l~~~g~ 152 (192)
T 1l3i_A 142 EAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 556667665 6
No 310
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.69 E-value=9e-08 Score=100.57 Aligned_cols=147 Identities=15% Similarity=0.187 Sum_probs=102.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|+|.++..+...+|..+|++||+++.+++.|++.+ |+ ++++++.+|..+.+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~~~~------------ 173 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFSALA------------ 173 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTGGGT------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhhhcc------------
Confidence 356899999999999999999889899999999999999999887 54 379999999865421
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCC-----C--CCcCCcCC--------CcHHHHHHHHHccCCC
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSS-----G--MTCPAADF--------VEGSFLLTVKDALSEQ 683 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~-----g--~s~Pp~~f--------~~~~fl~~~~~~L~~~ 683 (772)
..+||+|+.+.--..... . ...|...+ .-..+++.+.+.|+||
T Consensus 174 ----------------------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg 231 (276)
T 2b3t_A 174 ----------------------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 231 (276)
T ss_dssp ----------------------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE
T ss_pred ----------------------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC
Confidence 246999998521000000 0 00122222 1367899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHh-ccceEEEeecCCceEEEEEe
Q 004133 684 GLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGL 728 (772)
Q Consensus 684 Gilv~Nl~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~vl~a~ 728 (772)
|.+++........ .+.+.+++. |..+...+--.+...+++|.
T Consensus 232 G~l~~~~~~~~~~---~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 232 GFLLLEHGWQQGE---AVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred CEEEEEECchHHH---HHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 9999976544433 334444444 76666555445667777764
No 311
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.68 E-value=3.6e-08 Score=104.53 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCC------chhHHHHHHc-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEE-EEeeccCcccccCCCcc
Q 004133 67 SPPPQILVPGCGN------SRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQVFMDETFD 137 (772)
Q Consensus 67 ~~~~~ILDlGCG~------G~ls~~La~~-g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f-~~~D~~~l~~~~~~sfD 137 (772)
.++.+|||+|||+ |. ..++.. + ...|+|+|+|+. . .+++| +++|+.+++ ++ ++||
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~-~~-~~fD 125 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVH-TA-NKWD 125 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCC-CS-SCEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCC-cc-Cccc
Confidence 5788999999944 66 333433 4 247999999996 1 36889 999999987 54 7899
Q ss_pred EEEeccccccc----ccCccchHHHHHHHHHHHhccccCeEEEEEEcCchh
Q 004133 138 VILDKGGLDAL----MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 138 vVi~~~~l~~l----~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~ 184 (772)
+|++....+.. .+..........+++++.++|||||+|++..+....
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~ 176 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 176 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 99986542211 111111234678999999999999999997765443
No 312
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.68 E-value=1e-07 Score=95.30 Aligned_cols=107 Identities=13% Similarity=0.087 Sum_probs=81.3
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
+.+||.||+|.|.++..|... +..++++||+++.+++.|++.+.- ...++++++.+|..+. .
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~------------ 106 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI----P------------ 106 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC----S------------
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC----C------------
Confidence 349999999999999999988 777999999999999999998622 1246899999997542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|++..--. .+. --..+|+.+++.|+|||.+++.....
T Consensus 107 -----------------~~~~~~D~v~~~~~l~----~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 -----------------IEDNYADLIVSRGSVF----FWE------DVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -----------------SCTTCEEEEEEESCGG----GCS------CHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -----------------CCcccccEEEECchHh----hcc------CHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1136799999842100 010 12779999999999999999875443
No 313
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.67 E-value=1.5e-07 Score=102.00 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=90.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
+...+||.+|+|+|.++..+.... .+|++||+++.+++.|++.+ ++ .+.+++++.+|+.+++.....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl-~~~~v~~i~~D~~~~l~~~~~------- 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGL-EQAPIRWICEDAMKFIQREER------- 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTC-TTSCEEEECSCHHHHHHHHHH-------
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECcHHHHHHHHHh-------
Confidence 345799999999999999888863 39999999999999999987 44 223699999999999865420
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-----CcHHHHHHHHHccCCCcEEEEEecC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
...+||+||+|.-. .+.+ +.... .-..++..+.+.|+|||+|++...+
T Consensus 222 ----------------------~~~~fD~Ii~dPP~----~~~~-~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 222 ----------------------RGSTYDIILTDPPK----FGRG-THGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ----------------------HTCCBSEEEECCCS----EEEC-TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ----------------------cCCCceEEEECCcc----ccCC-chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 02579999996421 0110 00001 1257899999999999997765544
Q ss_pred CChhHHHHHHHHHHHhc
Q 004133 693 RSQATKDMVISRMKMVF 709 (772)
Q Consensus 693 ~~~~~~~~v~~~l~~vF 709 (772)
........+...+++.+
T Consensus 275 ~~~~~~~~~~~~l~~a~ 291 (332)
T 2igt_A 275 SIRASFYSMHELMRETM 291 (332)
T ss_dssp CTTSCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 43222233344444444
No 314
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.67 E-value=1.7e-09 Score=111.94 Aligned_cols=120 Identities=14% Similarity=0.176 Sum_probs=83.8
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
......+.+.+.. .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++.. ...+++++++|+.+++
T Consensus 15 ~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~- 88 (245)
T 1yub_A 15 EKVLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQ- 88 (245)
T ss_dssp TTTHHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTT-
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcC-
Confidence 3455556666654 567899999999999999999987 579999999999988866553 3457999999999988
Q ss_pred ccC-CCccEEEecccccccccCccchHH------HHHHH----HHHHhccccCeEEEEEE
Q 004133 131 FMD-ETFDVILDKGGLDALMEPELGHKL------GNQYL----SEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 131 ~~~-~sfDvVi~~~~l~~l~~~~~~~~~------~~~~l----~ei~rvLkpGG~~ii~~ 179 (772)
+++ ++| .|+++...+.. .+. -... ...++ +.+.|+|+|||++.++.
T Consensus 89 ~~~~~~f-~vv~n~Py~~~-~~~-~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 89 FPNKQRY-KIVGNIPYHLS-TQI-IKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCCSSEE-EEEEECCSSSC-HHH-HHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccCCCc-EEEEeCCcccc-HHH-HHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 664 688 66665332211 000 0000 01233 66899999999876643
No 315
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.67 E-value=2.1e-07 Score=95.53 Aligned_cols=144 Identities=13% Similarity=0.167 Sum_probs=103.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|+|.++..|+... |..+|.+||++|.+++.|++... ..+++..+.+|+...-. ..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--~~~ni~~V~~d~~~p~~-~~---------- 142 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--DRRNIFPILGDARFPEK-YR---------- 142 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--TCTTEEEEESCTTCGGG-GT----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--hhcCeeEEEEeccCccc-cc----------
Confidence 455789999999999999998875 77799999999999999998864 34678999998755311 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC-----
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----- 694 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----- 694 (772)
.....+|+|+.|+.-.+ ....++.++++.|+|||.+++-+..++
T Consensus 143 -------------------~~~~~vDvVf~d~~~~~------------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~ 191 (233)
T 4df3_A 143 -------------------HLVEGVDGLYADVAQPE------------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTT 191 (233)
T ss_dssp -------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT
T ss_pred -------------------cccceEEEEEEeccCCh------------hHHHHHHHHHHhccCCCEEEEEEecccCCCCC
Confidence 12367999999764332 126799999999999999998764442
Q ss_pred --hhHHHHHHHHHHHh-ccceEEEeecC--CceEEEEEe
Q 004133 695 --QATKDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGL 728 (772)
Q Consensus 695 --~~~~~~v~~~l~~v-F~~v~~~~~~~--~~N~vl~a~ 728 (772)
...++..++.|++. |.-+-.+.+.. ..+.++|+.
T Consensus 192 p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 192 EPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 33455667777665 76555554432 345666664
No 316
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.66 E-value=6.2e-08 Score=96.66 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=81.7
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
..+||.||+|+|.++..+...+|..++++||+++.+++.|++.+....-++++++.+|..++. .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~------------- 129 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---S------------- 129 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---C-------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---c-------------
Confidence 568999999999999999999888899999999999999998762211234999999986541 1
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
...||+|++... . --..+++.+++.|+|||.+++......
T Consensus 130 ------------------~~~~D~i~~~~~--------~------~~~~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 130 ------------------EPPFDGVISRAF--------A------SLNDMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp ------------------CSCEEEEECSCS--------S------SHHHHHHHHTTSEEEEEEEEEEESSCC
T ss_pred ------------------cCCcCEEEEecc--------C------CHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 256999997321 1 126899999999999999998764443
No 317
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.66 E-value=4.8e-08 Score=93.96 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=83.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.+|+|.|.++..+....+. |++||+|+.+++.|++.+....- +++++.+|+.+++.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~----------- 106 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKA----------- 106 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHH-----------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhc-----------
Confidence 4578999999999999999887654 99999999999999988732111 799999999998765431
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHH--HccCCCcEEEEEecCCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK--DALSEQGLFIVNLVSRS 694 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~--~~L~~~Gilv~Nl~~~~ 694 (772)
...+||+|++|.--. -...++++.+. +.|+|||++++......
T Consensus 107 ------------------~~~~~D~i~~~~~~~------------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 107 ------------------QGERFTVAFMAPPYA------------MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp ------------------TTCCEEEEEECCCTT------------SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred ------------------cCCceEEEEECCCCc------------hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 124799999953110 11256778887 99999999999876554
No 318
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.66 E-value=3.7e-08 Score=97.63 Aligned_cols=119 Identities=9% Similarity=0.056 Sum_probs=85.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
....+||.+|+|.|.++..+...+ |..+|++||+++.+++.|++.+... ..++++++.+|+.++....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 90 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI---------- 90 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC----------
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc----------
Confidence 345689999999999999888875 5669999999999999999987321 1468999999986653221
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~-~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
..+||+|++|.-- +....... ...-....+++.+.+.|+|||.+++..+..
T Consensus 91 ----------------------~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 91 ----------------------DCPVKAVMFNLGYLPSGDHSIS--TRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ----------------------CSCEEEEEEEESBCTTSCTTCB--CCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ----------------------cCCceEEEEcCCcccCcccccc--cCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 2679999997521 10000000 000012469999999999999999987654
No 319
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.65 E-value=8.7e-08 Score=98.92 Aligned_cols=120 Identities=19% Similarity=0.184 Sum_probs=89.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
....+||.+|+|.|.++..+... .|..+|++||+++.+++.|++.+... ..++++++.+|+.+. ..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~---------- 162 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--EL---------- 162 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CC----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CC----------
Confidence 34568999999999999999888 56789999999999999999987211 146899999998654 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
....||+|++|... | ..+++.+.+.|+|||.+++...+. ...
T Consensus 163 ---------------------~~~~~D~v~~~~~~---------~------~~~l~~~~~~L~~gG~l~~~~~~~--~~~ 204 (258)
T 2pwy_A 163 ---------------------EEAAYDGVALDLME---------P------WKVLEKAALALKPDRFLVAYLPNI--TQV 204 (258)
T ss_dssp ---------------------CTTCEEEEEEESSC---------G------GGGHHHHHHHEEEEEEEEEEESCH--HHH
T ss_pred ---------------------CCCCcCEEEECCcC---------H------HHHHHHHHHhCCCCCEEEEEeCCH--HHH
Confidence 12569999996421 1 478999999999999999877443 333
Q ss_pred HHHHHHHHHh-cc
Q 004133 699 DMVISRMKMV-FN 710 (772)
Q Consensus 699 ~~v~~~l~~v-F~ 710 (772)
..++..+++. |.
T Consensus 205 ~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 205 LELVRAAEAHPFR 217 (258)
T ss_dssp HHHHHHHTTTTEE
T ss_pred HHHHHHHHHCCCc
Confidence 4556666543 44
No 320
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.65 E-value=2.9e-08 Score=97.35 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=79.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|... ..+|++||++|.+++.|++.+ |+ ++++++.+|...+ ....
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l-~~~~-------- 86 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENL-DHYV-------- 86 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGG-GGTC--------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHH-Hhhc--------
Confidence 34578999999999999999887 569999999999999999887 44 6799998665442 1111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCC-CCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSP-DSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~-d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
+..||+|+++...- .....+.. ..-....+|+.+.+.|+|||.+++-++..
T Consensus 87 -----------------------~~~fD~v~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 87 -----------------------REPIRAAIFNLGYLPSADKSVIT--KPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------------------CSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred -----------------------cCCcCEEEEeCCCCCCcchhccc--ChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 35799999874111 00000000 00112468899999999999999887754
No 321
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.64 E-value=6.4e-08 Score=106.95 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=90.3
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC---------------------------------------C
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~---------------------------------------~ 92 (772)
.+...+...... .++.+|||++||+|.++..++..+. .
T Consensus 182 ~lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 182 TLAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp HHHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 344555555544 5678999999999999988877531 3
Q ss_pred eEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccc
Q 004133 93 GITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK 170 (772)
Q Consensus 93 ~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLk 170 (772)
.|+|+|+++.|++.|++++...+. .++|.++|+.+++ . .++||+|+++..+..-... ...+..+.+++.++||
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~-~-~~~~D~Iv~NPPyg~rl~~---~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK-S-EDEFGFIITNPPYGERLED---KDSVKQLYKELGYAFR 333 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCC-C-SCBSCEEEECCCCCCSHHH---HHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcC-c-CCCCcEEEECCCCcCccCC---HHHHHHHHHHHHHHHh
Confidence 599999999999999888755443 6999999999987 4 4689999997765422211 1125667777777887
Q ss_pred c--CeEEEEEEcC
Q 004133 171 S--GGKFVCLTLA 181 (772)
Q Consensus 171 p--GG~~ii~~~~ 181 (772)
+ ||.+++++-.
T Consensus 334 ~~~g~~~~iit~~ 346 (385)
T 3ldu_A 334 KLKNWSYYLITSY 346 (385)
T ss_dssp TSBSCEEEEEESC
T ss_pred hCCCCEEEEEECC
Confidence 6 8888888754
No 322
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.64 E-value=2.8e-07 Score=94.01 Aligned_cols=144 Identities=15% Similarity=0.155 Sum_probs=97.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|+|.++.+|....|..+|++||+++.+++.|++.... .+++.++.+|+.+......
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~------------ 139 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--RENIIPILGDANKPQEYAN------------ 139 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--CTTEEEEECCTTCGGGGTT------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--CCCeEEEECCCCCcccccc------------
Confidence 45689999999999999999998767999999999999999988754 3789999999865211011
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC--Ch----
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--SQ---- 695 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~--~~---- 695 (772)
. ...||+|+.|+...+ ....+++.+.+.|+|||.+++-+..+ +.
T Consensus 140 -----------------~-~~~~D~v~~~~~~~~------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 189 (230)
T 1fbn_A 140 -----------------I-VEKVDVIYEDVAQPN------------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDP 189 (230)
T ss_dssp -----------------T-SCCEEEEEECCCSTT------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCH
T ss_pred -----------------c-CccEEEEEEecCChh------------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCH
Confidence 1 146999997652221 23678999999999999999853211 11
Q ss_pred -hHHHHHHHHHHHh-ccceEEEeecC--CceEEEEEec
Q 004133 696 -ATKDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLS 729 (772)
Q Consensus 696 -~~~~~v~~~l~~v-F~~v~~~~~~~--~~N~vl~a~~ 729 (772)
......+..|.+. |..+....+.. ..+.+++|.+
T Consensus 190 ~~~~~~~l~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 190 KEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred HHhhHHHHHHHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 1121223355554 65444444322 2355666654
No 323
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=8.5e-08 Score=98.95 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=82.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..+...+|..++++||+++.+++.|++.. ++++++.+|+.++. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~---~----------- 92 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----PNTNFGKADLATWK---P----------- 92 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----TTSEEEECCTTTCC---C-----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----CCcEEEECChhhcC---c-----------
Confidence 4557899999999999999999888889999999999999999882 57899999976531 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
...||+|++..- ...+. --..+|+.+++.|+|||.+++.....
T Consensus 93 --------------------~~~fD~v~~~~~----l~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 93 --------------------AQKADLLYANAV----FQWVP------DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --------------------SSCEEEEEEESC----GGGST------THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --------------------cCCcCEEEEeCc----hhhCC------CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 357999998321 01111 12689999999999999999988654
No 324
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.63 E-value=2.5e-07 Score=93.95 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=96.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++..|...+ |..+|++||+++.+++.|++..... ++++++.+|+.+......
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~----------- 139 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRA----------- 139 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTT-----------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhc-----------
Confidence 45689999999999999999875 5579999999999999998887542 689999999865311000
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC----h-
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----Q- 695 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----~- 695 (772)
....||+|++|....+ ....++..+.+.|+|||.+++-+.... .
T Consensus 140 -------------------~~~~~D~v~~~~~~~~------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 188 (227)
T 1g8a_A 140 -------------------LVPKVDVIFEDVAQPT------------QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKE 188 (227)
T ss_dssp -------------------TCCCEEEEEECCCSTT------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSC
T ss_pred -------------------ccCCceEEEECCCCHh------------HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCC
Confidence 0247999998653111 124569999999999999988642221 1
Q ss_pred --hHHHHHHHHHHHhccceEEEeecC--CceEEEEEe
Q 004133 696 --ATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 728 (772)
Q Consensus 696 --~~~~~v~~~l~~vF~~v~~~~~~~--~~N~vl~a~ 728 (772)
.+....+..+.+.|..+....+.. ..+.++++.
T Consensus 189 ~~~~~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 189 PEQVFREVERELSEYFEVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEECTTTSSSEEEEEEE
T ss_pred hhhhhHHHHHHHHhhceeeeEeccCcccCCCEEEEEE
Confidence 122223444555576655555432 234455554
No 325
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.63 E-value=1.4e-07 Score=92.22 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=83.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++..+... +..+|++||+++.+++.|++.+... ..++++++.+|+.+++.....
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------- 112 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---------- 112 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh----------
Confidence 4568999999999998877764 5569999999999999999887321 135799999999998765420
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHH--HHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~--~~~L~~~Gilv~Nl~~~ 693 (772)
...+||+|++|.- . ..-....+++.+ .+.|+|||++++.....
T Consensus 113 -------------------~~~~fD~i~~~~~---~--------~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 -------------------EKLQFDLVLLDPP---Y--------AKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp -------------------TTCCEEEEEECCC---G--------GGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred -------------------cCCCCCEEEECCC---C--------CchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 1257999998521 0 011246777777 78899999999877554
No 326
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.63 E-value=5.9e-08 Score=101.97 Aligned_cols=117 Identities=14% Similarity=0.180 Sum_probs=88.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
....+||.+|+|.|.++..+... .|..+|++||+++.+++.|++.+... ..++++++.+|+.+++ .
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~--------- 176 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI---S--------- 176 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---C---------
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC---c---------
Confidence 34578999999999999999887 67789999999999999999987332 2367999999986521 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
...||+|++|+.. | ..+|+.+.+.|+|||.+++..... ...
T Consensus 177 ----------------------~~~fD~Vi~~~~~---------~------~~~l~~~~~~LkpgG~l~i~~~~~--~~~ 217 (275)
T 1yb2_A 177 ----------------------DQMYDAVIADIPD---------P------WNHVQKIASMMKPGSVATFYLPNF--DQS 217 (275)
T ss_dssp ----------------------SCCEEEEEECCSC---------G------GGSHHHHHHTEEEEEEEEEEESSH--HHH
T ss_pred ----------------------CCCccEEEEcCcC---------H------HHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 2569999995421 1 478999999999999999877433 233
Q ss_pred HHHHHHHHHh
Q 004133 699 DMVISRMKMV 708 (772)
Q Consensus 699 ~~v~~~l~~v 708 (772)
..+...+++.
T Consensus 218 ~~~~~~l~~~ 227 (275)
T 1yb2_A 218 EKTVLSLSAS 227 (275)
T ss_dssp HHHHHHSGGG
T ss_pred HHHHHHHHHC
Confidence 4445555543
No 327
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.62 E-value=1.1e-07 Score=105.36 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=88.7
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC---------------------------------------C
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~---------------------------------------~ 92 (772)
.+...+...... .++..|||++||+|.++..++..+. .
T Consensus 188 ~lAa~ll~l~~~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 188 TMAAALVLLTSW---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHHSCC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 444555555554 5678999999999999988876532 2
Q ss_pred eEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccc
Q 004133 93 GITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK 170 (772)
Q Consensus 93 ~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLk 170 (772)
.|+|+|+++.|++.|++++...+. .++|.++|+.+++ . .++||+|+++..+..-... ...+..+.+.+.++||
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~-~-~~~fD~Iv~NPPYg~rl~~---~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ-T-EDEYGVVVANPPYGERLED---EEAVRQLYREMGIVYK 339 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC-C-CCCSCEEEECCCCCCSHHH---HHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC-C-CCCCCEEEECCCCccccCC---chhHHHHHHHHHHHHh
Confidence 499999999999999888765543 5999999999987 4 4589999998654322111 1124556666777776
Q ss_pred c--CeEEEEEEcC
Q 004133 171 S--GGKFVCLTLA 181 (772)
Q Consensus 171 p--GG~~ii~~~~ 181 (772)
+ ||.+++++-.
T Consensus 340 ~~~g~~~~iit~~ 352 (393)
T 3k0b_A 340 RMPTWSVYVLTSY 352 (393)
T ss_dssp TCTTCEEEEEECC
T ss_pred cCCCCEEEEEECC
Confidence 6 8998888754
No 328
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.62 E-value=1.4e-07 Score=95.90 Aligned_cols=106 Identities=22% Similarity=0.329 Sum_probs=83.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..+...+|..++++||+++.+++.|++.+.- ..+++++.+|+.++ .
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG--NLKVKYIEADYSKY----D----------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS--CTTEEEEESCTTTC----C-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc--CCCEEEEeCchhcc----C-----------
Confidence 456899999999999999999999989999999999999999999853 23899999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH---HHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~---~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
. ...||+|++.. . -..+-+. .+|+.+++.|+|||.+++.....
T Consensus 106 ------------------~-~~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 106 ------------------F-EEKYDMVVSAL--S---------IHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp ------------------C-CSCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ------------------C-CCCceEEEEeC--c---------cccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 1 25799999842 1 1122222 48999999999999999865443
No 329
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.62 E-value=1.7e-07 Score=103.24 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=98.7
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
..+||.||+|.|.++..+....|..+|++||+++.+++.|++.+ |+....+++++.+|+.+.+ .
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~---~---------- 289 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV---E---------- 289 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC---C----------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC---C----------
Confidence 47999999999999999999999999999999999999999887 4432346788999987631 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHH
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 699 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 699 (772)
..+||+|++|.--. . +.. ...-....+++.+.+.|+|||.+++- ..+....
T Consensus 290 ---------------------~~~fD~Ii~nppfh--~-~~~--~~~~~~~~~l~~~~~~LkpgG~l~iv-~n~~~~~-- 340 (375)
T 4dcm_A 290 ---------------------PFRFNAVLCNPPFH--Q-QHA--LTDNVAWEMFHHARRCLKINGELYIV-ANRHLDY-- 340 (375)
T ss_dssp ---------------------TTCEEEEEECCCC------------CCHHHHHHHHHHHHEEEEEEEEEE-EETTSCH--
T ss_pred ---------------------CCCeeEEEECCCcc--c-Ccc--cCHHHHHHHHHHHHHhCCCCcEEEEE-EECCcCH--
Confidence 35799999852100 0 000 01112357999999999999999983 3344333
Q ss_pred HHHHHHHHhccceEEEeecCCceEEEEEec
Q 004133 700 MVISRMKMVFNHLFCLQLEEDVNLVLFGLS 729 (772)
Q Consensus 700 ~v~~~l~~vF~~v~~~~~~~~~N~vl~a~~ 729 (772)
-..+.+.|..+..+. .+..=.|+-+..
T Consensus 341 --~~~l~~~fg~~~~~a-~~~~F~V~~~~~ 367 (375)
T 4dcm_A 341 --FHKLKKIFGNCTTIA-TNNKFVVLKAVK 367 (375)
T ss_dssp --HHHHHHHHSCCEEEE-ECSSEEEEEEEC
T ss_pred --HHHHHHhcCCEEEEe-eCCCEEEEEEcC
Confidence 345677888766655 333334444443
No 330
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.60 E-value=1.5e-07 Score=94.62 Aligned_cols=147 Identities=12% Similarity=0.122 Sum_probs=100.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+.... |..+|++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~---------- 101 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI----P---------- 101 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC----S----------
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC----C----------
Confidence 345799999999999998888886 7779999999999999999987221124799999997543 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh---
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA--- 696 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~--- 696 (772)
.....||+|++...-. .+. -...+|+.+.+.|+|||.+++..+.....
T Consensus 102 -------------------~~~~~fD~v~~~~~l~----~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 152 (219)
T 3dh0_A 102 -------------------LPDNTVDFIFMAFTFH----ELS------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKG 152 (219)
T ss_dssp -------------------SCSSCEEEEEEESCGG----GCS------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS
T ss_pred -------------------CCCCCeeEEEeehhhh----hcC------CHHHHHHHHHHHhCCCeEEEEEEecccccccC
Confidence 1136799999842111 111 12789999999999999999865443210
Q ss_pred -------HHHHHHHHHHHh-ccceEEEeecCCceEEEEEecCC
Q 004133 697 -------TKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 697 -------~~~~v~~~l~~v-F~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
..+.+...+++. |..+...... .....+++.+..
T Consensus 153 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~~k~~ 194 (219)
T 3dh0_A 153 PPPEEVYSEWEVGLILEDAGIRVGRVVEVG-KYCFGVYAMIVK 194 (219)
T ss_dssp CCGGGSCCHHHHHHHHHHTTCEEEEEEEET-TTEEEEEEECC-
T ss_pred CchhcccCHHHHHHHHHHCCCEEEEEEeeC-CceEEEEEEecc
Confidence 134556666665 6555554433 355666666543
No 331
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.60 E-value=1.3e-07 Score=98.54 Aligned_cols=86 Identities=10% Similarity=0.212 Sum_probs=69.5
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+...+.. .++.+|||+|||+|.++..|++.+ .+|+++|+++.|++.++++... ..+++++++|+.+++
T Consensus 15 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~- 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFD- 88 (255)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCC-
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCC-
Confidence 3455566677665 578899999999999999999987 4799999999999999888743 568999999999987
Q ss_pred ccC----CCccEEEecc
Q 004133 131 FMD----ETFDVILDKG 143 (772)
Q Consensus 131 ~~~----~sfDvVi~~~ 143 (772)
+++ +.|| |+++-
T Consensus 89 ~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 89 FSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGGSCCSSCEE-EEEEC
T ss_pred HHHhccCCCeE-EEecC
Confidence 543 5688 55543
No 332
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.60 E-value=2.1e-07 Score=102.76 Aligned_cols=122 Identities=13% Similarity=0.146 Sum_probs=90.4
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCC---------------------------------------C
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~---------------------------------------~ 92 (772)
.+...+...... .++..|||++||+|.++...+..+. .
T Consensus 181 ~LAaall~l~~~---~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 181 NMAAAIILLSNW---FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 455555555554 5678999999999999988876532 2
Q ss_pred eEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeeccCcccccCCCccEEEecccccccccCccchHHHHHHHHHHHhccc
Q 004133 93 GITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK 170 (772)
Q Consensus 93 ~V~gvDiS~~~I~~a~~~~~~~~~--~v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLk 170 (772)
.|+|+|+++.|++.|++++...+. .++|.++|+.+++ .+ .+||+|+++-.+..-... ......+.+++.+.||
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~-~~-~~fD~Iv~NPPYG~rl~~---~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFK-TN-KINGVLISNPPYGERLLD---DKAVDILYNEMGETFA 332 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCC-CC-CCSCEEEECCCCTTTTSC---HHHHHHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCC-cc-CCcCEEEECCchhhccCC---HHHHHHHHHHHHHHHh
Confidence 499999999999999888765543 5999999999987 44 589999998665432221 1125667777777777
Q ss_pred c--CeEEEEEEcC
Q 004133 171 S--GGKFVCLTLA 181 (772)
Q Consensus 171 p--GG~~ii~~~~ 181 (772)
+ ||.+++++-.
T Consensus 333 ~~~g~~~~iit~~ 345 (384)
T 3ldg_A 333 PLKTWSQFILTND 345 (384)
T ss_dssp TCTTSEEEEEESC
T ss_pred hCCCcEEEEEECC
Confidence 6 9998888753
No 333
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.60 E-value=1.9e-07 Score=100.29 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=95.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|..+..|...++ ..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.. .
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~-~-------- 184 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGE-L-------- 184 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGG-G--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccc-c--------
Confidence 3456899999999999999998875 469999999999999999887 65 369999999877522 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC--------------CcHHHHHHHHHccCC
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 682 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f--------------~~~~fl~~~~~~L~~ 682 (772)
...||+|++|+-.+. .|+.-..++. ....+|+.+.+.|+|
T Consensus 185 ------------------------~~~fD~Il~d~Pcsg--~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 185 ------------------------NVEFDKILLDAPCTG--SGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp ------------------------CCCEEEEEEECCTTS--TTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ------------------------cccCCEEEEeCCCCC--cccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 246999999874321 1221111111 125899999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhcc
Q 004133 683 QGLFIVNLVSRSQATKDMVISRMKMVFN 710 (772)
Q Consensus 683 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 710 (772)
||.+++...+-.....+.++..+.+-+.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 9999998766666555666666554443
No 334
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.59 E-value=1.6e-07 Score=101.53 Aligned_cols=120 Identities=15% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhcC-------CC----CCCCeEEEEccHHHHHHhh
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFG-------FT----QDKSLKVHITDGIKFVREM 608 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fg-------~~----~~~rl~v~i~Dg~~~l~~~ 608 (772)
....+||.||+|.|.++..+... .|..+|++||++|.+++.|++.+. +. ..++++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 34568999999999999999887 466799999999999999999763 11 1368999999987653222
Q ss_pred cccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE
Q 004133 609 KSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~ 688 (772)
. ...||+|++|... | ..++..+.+.|+|||.|++
T Consensus 184 ~-------------------------------~~~fD~V~~~~~~---------~------~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 184 K-------------------------------SLTFDAVALDMLN---------P------HVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp -----------------------------------EEEEEECSSS---------T------TTTHHHHGGGEEEEEEEEE
T ss_pred C-------------------------------CCCeeEEEECCCC---------H------HHHHHHHHHhcCCCcEEEE
Confidence 2 2469999996522 1 2278999999999999997
Q ss_pred EecCCChhHHHHHHHHHHHh
Q 004133 689 NLVSRSQATKDMVISRMKMV 708 (772)
Q Consensus 689 Nl~~~~~~~~~~v~~~l~~v 708 (772)
-.. .......+++.+++.
T Consensus 218 ~~~--~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 218 YVV--NITQVIELLDGIRTC 235 (336)
T ss_dssp EES--SHHHHHHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHHHHhc
Confidence 664 334444556666653
No 335
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.59 E-value=6e-08 Score=97.12 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=80.4
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC--CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--DKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~--~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+||.+|+|+|.++..+.... ..+|++||+|+.+++.|++.+.... +++++++.+|+.+++....
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~----------- 121 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ----------- 121 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-----------
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-----------
Confidence 4689999999999988766553 3589999999999999999873211 1589999999988754321
Q ss_pred cccccccCCCCCCCCCCCCCCCc-eeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHH--HHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNAR-VDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~-yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~--~~~L~~~Gilv~Nl~~~~ 694 (772)
... ||+|++|.- .. .-....+++.+ .+.|+|||++++......
T Consensus 122 --------------------~~~~fD~I~~~~~---~~--------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 --------------------NQPHFDVVFLDPP---FH--------FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --------------------SSCCEEEEEECCC---SS--------SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --------------------cCCCCCEEEECCC---CC--------CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 257 999998531 00 01235778888 557999999998775544
No 336
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.58 E-value=1.4e-07 Score=103.69 Aligned_cols=116 Identities=10% Similarity=0.140 Sum_probs=83.9
Q ss_pred HHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcc-cc
Q 004133 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-VF 131 (772)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~-~~ 131 (772)
...+.+++.. .+.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...+ .+++|+++|+.++. .+
T Consensus 203 ~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~ 277 (369)
T 3bt7_A 203 LEWALDVTKG----SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAM 277 (369)
T ss_dssp HHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHH
T ss_pred HHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHH
Confidence 3444444442 3578999999999999999875 4589999999999999988775544 47999999998752 12
Q ss_pred cC--------------CCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhhhh
Q 004133 132 MD--------------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLG 187 (772)
Q Consensus 132 ~~--------------~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~~~ 187 (772)
.. .+||+|+....- ..+..++.+.|+++|++++++.......+
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr-------------~g~~~~~~~~l~~~g~ivyvsc~p~t~ar 334 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPR-------------SGLDSETEKMVQAYPRILYISCNPETLCK 334 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCT-------------TCCCHHHHHHHTTSSEEEEEESCHHHHHH
T ss_pred hhccccccccccccccCCCCEEEECcCc-------------cccHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 21 379999853211 12345677778899999999887655443
No 337
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.58 E-value=1.8e-07 Score=105.26 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=102.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|..+..|...+++ .+|++||+++..++.+++.. |+ .++.++.+|+.++.....
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~~------- 173 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHFS------- 173 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHHT-------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhcc-------
Confidence 34578999999999999999887654 69999999999999999875 66 359999999998865432
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC--------------CcHHHHHHHHHccCC
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 682 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f--------------~~~~fl~~~~~~L~~ 682 (772)
..||+|++|+-.+. .|+....++. +..++|..+.+.|+|
T Consensus 174 -------------------------~~FD~Il~DaPCSg--~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 174 -------------------------GFFDRIVVDAPCSG--EGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp -------------------------TCEEEEEEECCCCC--GGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred -------------------------ccCCEEEECCCCCC--ccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 56999999984331 2321111111 234889999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhcc
Q 004133 683 QGLFIVNLVSRSQATKDMVISRMKMVFN 710 (772)
Q Consensus 683 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 710 (772)
||.|++...+-..+..+.++..+.+-++
T Consensus 227 GG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 227 KGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 9999999888877777778888777665
No 338
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.57 E-value=1.1e-07 Score=99.33 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=83.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+....|..++++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~----------- 100 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL----P----------- 100 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC----C-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC----C-----------
Confidence 4567999999999999999999998899999999999999999987322224799999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
.....||+|++..--. .+.. ...+|+.+++.|+|||.+++-.
T Consensus 101 ------------------~~~~~fD~v~~~~~l~----~~~~------~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 ------------------FEDSSFDHIFVCFVLE----HLQS------PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ------------------SCTTCEEEEEEESCGG----GCSC------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEEechhh----hcCC------HHHHHHHHHHHcCCCcEEEEEE
Confidence 1136799999842111 1111 2589999999999999999854
No 339
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.57 E-value=1.2e-07 Score=95.08 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=79.3
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
..+||.+|+|.|.++..+..... .+|++||+++.+++.|++.+....-++++++.+|+.+++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~-------------- 119 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK-------------- 119 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSC--------------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhc--------------
Confidence 46899999999999987665532 489999999999999998873211157999999999986442
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHH--ccCCCcEEEEEecC
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD--ALSEQGLFIVNLVS 692 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~--~L~~~Gilv~Nl~~ 692 (772)
...||+|++|.. . ..-....+++.+.+ .|+|||++++....
T Consensus 120 ------------------~~~fD~V~~~~p---~--------~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 ------------------GTPHNIVFVDPP---F--------RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ------------------CCCEEEEEECCS---S--------STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ------------------CCCCCEEEECCC---C--------CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 257999998532 0 00123677888876 49999999987654
No 340
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.56 E-value=2.3e-07 Score=95.69 Aligned_cols=104 Identities=13% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+....+. +|++||+++.+++.|++.+. .++++++.+|+.++ .
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~----~----------- 103 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDI----A----------- 103 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGC----C-----------
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhC----C-----------
Confidence 35689999999999999999988654 89999999999999999987 57899999998543 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++.. ....+. --..+|+.+++.|+|||.+++.+.
T Consensus 104 ------------------~~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 ------------------IEPDAYNVVLSSL----ALHYIA------SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp ------------------CCTTCEEEEEEES----CGGGCS------CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------------CCCCCeEEEEEch----hhhhhh------hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 1136799999832 111111 127899999999999999998754
No 341
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.56 E-value=2.1e-07 Score=97.80 Aligned_cols=117 Identities=19% Similarity=0.253 Sum_probs=89.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|.++..+... .|..+|++||++|.+++.|++.+ |+ .++++++.+|..++ ..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 178 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDISEG---FD------- 178 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGGGC---CS-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHc---cc-------
Confidence 34568999999999999999988 56789999999999999999987 43 35799999998764 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 696 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 696 (772)
...||+|++|... | ..+++.+.+.|+|||.+++...+. .
T Consensus 179 ------------------------~~~~D~V~~~~~~---------~------~~~l~~~~~~L~pgG~l~~~~~~~--~ 217 (277)
T 1o54_A 179 ------------------------EKDVDALFLDVPD---------P------WNYIDKCWEALKGGGRFATVCPTT--N 217 (277)
T ss_dssp ------------------------CCSEEEEEECCSC---------G------GGTHHHHHHHEEEEEEEEEEESSH--H
T ss_pred ------------------------CCccCEEEECCcC---------H------HHHHHHHHHHcCCCCEEEEEeCCH--H
Confidence 2469999995411 1 478999999999999999877533 2
Q ss_pred HHHHHHHHHHHh-cc
Q 004133 697 TKDMVISRMKMV-FN 710 (772)
Q Consensus 697 ~~~~v~~~l~~v-F~ 710 (772)
....+.+.|++. |.
T Consensus 218 ~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 218 QVQETLKKLQELPFI 232 (277)
T ss_dssp HHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHCCCc
Confidence 334456666553 44
No 342
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.56 E-value=2.2e-07 Score=93.51 Aligned_cols=106 Identities=13% Similarity=0.098 Sum_probs=80.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-----CCCeEEEEccHHHHHHhhcccCccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATD 615 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-----~~rl~v~i~Dg~~~l~~~~~~~~~~ 615 (772)
..+.+||.||+|.|.++..|....+..++++||+++.+++.|++.+.... .++++++.+|... ..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------ 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY----QD------ 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS----CC------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc----cc------
Confidence 34579999999999999999998887899999999999999999974321 1379999999621 11
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEe
Q 004133 616 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 690 (772)
....+||+|++.- . -..+-. ..+|+.+++.|+|||++++..
T Consensus 98 -----------------------~~~~~fD~v~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 -----------------------KRFHGYDAATVIE----V-------IEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp -----------------------GGGCSCSEEEEES----C-------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -----------------------ccCCCcCEEeeHH----H-------HHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 0125799999721 1 111211 579999999999999887654
No 343
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.56 E-value=6.8e-07 Score=88.75 Aligned_cols=141 Identities=16% Similarity=0.050 Sum_probs=97.7
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
..+||.||+|.|.++..|... ..++++||+++.+++.|++.+ ++++++.+|+.++ ..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~--~~-------------- 98 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-----PSVTFHHGTITDL--SD-------------- 98 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGG--GG--------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-----CCCeEEeCccccc--cc--------------
Confidence 578999999999999999887 358999999999999999984 3689999998764 11
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCCh-------
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ------- 695 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~------- 695 (772)
....||+|++..--. .+ |+. --..+|+.+++.|+|||.+++.......
T Consensus 99 -----------------~~~~fD~v~~~~~l~----~~--~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 153 (203)
T 3h2b_A 99 -----------------SPKRWAGLLAWYSLI----HM--GPG--ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHP 153 (203)
T ss_dssp -----------------SCCCEEEEEEESSST----TC--CTT--THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCS
T ss_pred -----------------CCCCeEEEEehhhHh----cC--CHH--HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhch
Confidence 136799999832110 01 111 1278999999999999999988765432
Q ss_pred ------hHHHHHHHHHHHh-ccceEEEeecCCceEEEEEecCC
Q 004133 696 ------ATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 696 ------~~~~~v~~~l~~v-F~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
-..+.+.+.+++. |.-+............+...+..
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~~~ 196 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEASL 196 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEECC
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhhhh
Confidence 1234555666555 55444444444445555554443
No 344
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.55 E-value=1.6e-07 Score=101.90 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccC------C---CCcEEEEeeccCcc-cc--cCCC
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD------R---SDMRWRVMDMTSMQ-VF--MDET 135 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~------~---~~v~f~~~D~~~l~-~~--~~~s 135 (772)
.+.+||++|||+|.++..+++.+..+|+.||+++.+++.+++.+... . ++++++.+|+.+.- .+ ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46799999999999999999887678999999999999998876321 1 26999999998854 11 3578
Q ss_pred ccEEEecccc-cccccCc--cchHHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 136 FDVILDKGGL-DALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 136 fDvVi~~~~l-~~l~~~~--~~~~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
||+|+....- ..-..+. .....+..+++.+.++|+|||++++.+-+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999875422 1000110 00122444445559999999999987644
No 345
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.55 E-value=2.5e-07 Score=98.30 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=85.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+...++ .+|++||+++.+++.|++.+ |+ .++++++.+|..++ .
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 135 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF----D-------- 135 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC----C--------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc----C--------
Confidence 3456899999999999999998876 69999999999999999887 43 45899999998764 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC---cCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---ADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp---~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
..||+|+... ....+..|. ..-.-..+|+.+.+.|+|||.+++..+...
T Consensus 136 ------------------------~~fD~v~~~~----~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 136 ------------------------EPVDRIVSLG----AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ------------------------CCCSEEEEES----CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ------------------------CCccEEEEcc----hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 5699999731 101111110 001126899999999999999999887654
Q ss_pred h
Q 004133 695 Q 695 (772)
Q Consensus 695 ~ 695 (772)
.
T Consensus 188 ~ 188 (302)
T 3hem_A 188 D 188 (302)
T ss_dssp C
T ss_pred C
Confidence 3
No 346
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.54 E-value=1.9e-07 Score=102.69 Aligned_cols=105 Identities=15% Similarity=0.168 Sum_probs=81.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.|| |+|.++..+....|..+|++||+||.++++|++++ |+ + +++++.+|+.+++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--~-~v~~~~~D~~~~l~~~---------- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--E-DIEIFTFDLRKPLPDY---------- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--C-CEEEECCCTTSCCCTT----------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--C-CEEEEEChhhhhchhh----------
Confidence 357999999 99999999988877679999999999999999986 65 2 7999999987643210
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCc-EEEEEecC
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG-LFIVNLVS 692 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~G-ilv~Nl~~ 692 (772)
....||+|++|. + . + +.. ...|++.+.+.|+||| ++++.+..
T Consensus 238 ---------------------~~~~fD~Vi~~~--p--~-~----~~~--~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 238 ---------------------ALHKFDTFITDP--P--E-T----LEA--IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp ---------------------TSSCBSEEEECC--C--S-S----HHH--HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ---------------------ccCCccEEEECC--C--C-c----hHH--HHHHHHHHHHHcccCCeEEEEEEec
Confidence 024799999953 1 0 0 112 3889999999999999 55666655
No 347
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.54 E-value=1.6e-07 Score=97.72 Aligned_cols=105 Identities=8% Similarity=0.031 Sum_probs=77.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-----------------CCCCCeEEEEccHHHH
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----------------TQDKSLKVHITDGIKF 604 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-----------------~~~~rl~v~i~Dg~~~ 604 (772)
...+||++|+|.|..+.+|.+. +.+|++||++|.+++.|++..+. ....+++++++|..++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4579999999999999999887 35899999999999999887653 1246899999998764
Q ss_pred HHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCc
Q 004133 605 VREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG 684 (772)
Q Consensus 605 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~G 684 (772)
-.. ....||+|+.- .. -..+ |++ ....+++.+.+.|+|||
T Consensus 146 ~~~--------------------------------~~~~FD~V~~~-~~---l~~l--~~~--~~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 146 PRA--------------------------------NIGKFDRIWDR-GA---LVAI--NPG--DHDRYADIILSLLRKEF 185 (252)
T ss_dssp GGG--------------------------------CCCCEEEEEES-SS---TTTS--CGG--GHHHHHHHHHHTEEEEE
T ss_pred Ccc--------------------------------cCCCEEEEEEh-hh---hhhC--CHH--HHHHHHHHHHHHcCCCe
Confidence 111 01579999851 11 1112 221 23579999999999999
Q ss_pred EEEE
Q 004133 685 LFIV 688 (772)
Q Consensus 685 ilv~ 688 (772)
.|++
T Consensus 186 ~l~l 189 (252)
T 2gb4_A 186 QYLV 189 (252)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 348
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.54 E-value=3.2e-07 Score=93.93 Aligned_cols=105 Identities=13% Similarity=0.189 Sum_probs=81.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+... ..+|++||+++.+++.|++. ++++.+|+.+++....
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~----------- 98 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLP----------- 98 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSC-----------
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcC-----------
Confidence 44579999999999999999887 35899999999999999887 7899999999875543
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
..+||+|++.- ....+ +++ --..+|+.+++.|+|||.+++......
T Consensus 99 --------------------~~~fD~i~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 99 --------------------DKYLDGVMISH----FVEHL--DPE--RLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp --------------------TTCBSEEEEES----CGGGS--CGG--GHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred --------------------CCCeeEEEECC----chhhC--CcH--HHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 36799999721 10011 111 116899999999999999999886543
No 349
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.54 E-value=2.4e-07 Score=96.44 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=82.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
..+.+||.||+|.|.++..+... +..+|++||+++.+++.|++.+ |+ .++++++.+|..++ .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 109 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDDL----P-------- 109 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhhC----C--------
Confidence 45679999999999999999988 7779999999999999999886 44 46799999998542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++.. . -..+--..+|+.+++.|+|||.+++...
T Consensus 110 ---------------------~~~~~fD~i~~~~--~---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 110 ---------------------FRNEELDLIWSEG--A---------IYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ---------------------CCTTCEEEEEESS--C---------GGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEEcC--C---------ceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1136799999721 1 1111237899999999999999998754
No 350
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.54 E-value=3e-07 Score=91.90 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=78.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|... ..+|++||+++.+++.|++.+.-..-++++++.+|+.+....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------- 140 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA------------- 140 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-------------
Confidence 45678999999999999999888 469999999999999999987321124799999998764222
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
...||+|+++..-. .+. ..+.+.|+|||.+++.+..
T Consensus 141 --------------------~~~~D~i~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 --------------------RAPFDAIIVTAAPP-----------EIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp --------------------GCCEEEEEESSBCS-----------SCC-----THHHHTEEEEEEEEEEECS
T ss_pred --------------------CCCccEEEEccchh-----------hhh-----HHHHHhcccCcEEEEEEcC
Confidence 25799999964222 111 2578999999999999865
No 351
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.54 E-value=1.6e-07 Score=98.76 Aligned_cols=110 Identities=13% Similarity=0.129 Sum_probs=84.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
.+.+||.||+|.|.++..|... ..+|++||+++.+++.|++.+.-. ..++++++.+|+.+....
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 132 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------------- 132 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-------------
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-------------
Confidence 4579999999999999999887 469999999999999999987321 236899999998765311
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCCh
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 695 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~ 695 (772)
....||+|++..-- ..+. -...+|+.+++.|+|||.+++..+.+..
T Consensus 133 -------------------~~~~fD~v~~~~~l----~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 133 -------------------LETPVDLILFHAVL----EWVA------DPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp -------------------CSSCEEEEEEESCG----GGCS------CHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred -------------------cCCCceEEEECchh----hccc------CHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 13679999984211 1111 1168999999999999999998876544
No 352
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.53 E-value=1.5e-07 Score=94.39 Aligned_cols=104 Identities=9% Similarity=-0.005 Sum_probs=75.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC------------CCCCeEEEEccHHHHHHhh
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT------------QDKSLKVHITDGIKFVREM 608 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~------------~~~rl~v~i~Dg~~~l~~~ 608 (772)
+...+||++|+|.|..+.+|.+. ..+|++||+++.|++.|++..+.. ...+++++++|..++-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 34579999999999999999887 359999999999999999987541 1357999999986642110
Q ss_pred cccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEE
Q 004133 609 KSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLF 686 (772)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gil 686 (772)
..+||+|+.-. .- ..+ |++ ....+++.+++.|+|||.+
T Consensus 99 --------------------------------~~~fD~v~~~~-~l---~~l--~~~--~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 99 --------------------------------IGHCAAFYDRA-AM---IAL--PAD--MRERYVQHLEALMPQACSG 136 (203)
T ss_dssp --------------------------------HHSEEEEEEES-CG---GGS--CHH--HHHHHHHHHHHHSCSEEEE
T ss_pred --------------------------------CCCEEEEEECc-ch---hhC--CHH--HHHHHHHHHHHHcCCCcEE
Confidence 04699998511 10 111 111 1246899999999999973
No 353
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.53 E-value=2.3e-07 Score=92.50 Aligned_cols=120 Identities=14% Similarity=0.200 Sum_probs=87.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+... +..+|++||+++.+++.|++.+....-++++++.+|..++ .
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~----------- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD----V----------- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT----C-----------
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc----C-----------
Confidence 34579999999999999998875 6669999999999999999987322122399999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 700 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 700 (772)
..+||+|+.+.. .+. -..+++.+.+.|+|||.+++..+... ..+.
T Consensus 123 --------------------~~~fD~i~~~~~------------~~~-~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~ 167 (205)
T 3grz_A 123 --------------------DGKFDLIVANIL------------AEI-LLDLIPQLDSHLNEDGQVIFSGIDYL--QLPK 167 (205)
T ss_dssp --------------------CSCEEEEEEESC------------HHH-HHHHGGGSGGGEEEEEEEEEEEEEGG--GHHH
T ss_pred --------------------CCCceEEEECCc------------HHH-HHHHHHHHHHhcCCCCEEEEEecCcc--cHHH
Confidence 257999998531 111 26889999999999999998644332 2334
Q ss_pred HHHHHHHh-ccc
Q 004133 701 VISRMKMV-FNH 711 (772)
Q Consensus 701 v~~~l~~v-F~~ 711 (772)
+.+.+++. |..
T Consensus 168 ~~~~~~~~Gf~~ 179 (205)
T 3grz_A 168 IEQALAENSFQI 179 (205)
T ss_dssp HHHHHHHTTEEE
T ss_pred HHHHHHHcCCce
Confidence 45555544 443
No 354
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.53 E-value=6.6e-07 Score=90.33 Aligned_cols=140 Identities=15% Similarity=0.121 Sum_probs=90.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHH----HHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~----~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.||+|+|.++..|....+..+|++||++|.++ +.|++. +++.++++|+........
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~~~~~~~------- 122 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKYSG------- 122 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGTTT-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCCchhhcc-------
Confidence 345689999999999999999888766999999999865 444432 357888888754210000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC---
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--- 693 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~--- 693 (772)
. ...||+|++|+.. + -....+++.+++.|+|||.|++.+..+
T Consensus 123 ----------------------~-~~~fD~V~~~~~~----------~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 167 (210)
T 1nt2_A 123 ----------------------I-VEKVDLIYQDIAQ----------K--NQIEILKANAEFFLKEKGEVVIMVKARSID 167 (210)
T ss_dssp ----------------------T-CCCEEEEEECCCS----------T--THHHHHHHHHHHHEEEEEEEEEEEEHHHHC
T ss_pred ----------------------c-ccceeEEEEeccC----------h--hHHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 0 2569999997411 1 112346899999999999999885221
Q ss_pred ---C-hhHHHHHHHHHHHhccceEEEeecC--CceEEEEEe
Q 004133 694 ---S-QATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 728 (772)
Q Consensus 694 ---~-~~~~~~v~~~l~~vF~~v~~~~~~~--~~N~vl~a~ 728 (772)
+ .+.....++.+++.|.-+-...... ..+.++++.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 168 STAEPEEVFKSVLKEMEGDFKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEEEEECTTTCTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhhcEEeeeecCCCCCCCcEEEEEE
Confidence 1 1222223455676676555544422 245555554
No 355
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.53 E-value=2.8e-07 Score=94.99 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+....+. +|++||+++.+++.|++.+ |+ .++++++.+|+.++ .
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 109 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDNL----P-------- 109 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhC----C--------
Confidence 34569999999999999999999875 9999999999999999886 44 46799999998432 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++..--. ++--..+|+.+++.|+|||.+++...
T Consensus 110 ---------------------~~~~~fD~v~~~~~l~-----------~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 110 ---------------------FQNEELDLIWSEGAIY-----------NIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp ---------------------SCTTCEEEEEEESCSC-----------CCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEecChHh-----------hcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1136799999842111 11237899999999999999998753
No 356
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.53 E-value=4.1e-07 Score=91.16 Aligned_cols=119 Identities=12% Similarity=0.057 Sum_probs=76.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
.+.+||.||.| ..+.++.+. ++.+|++||.|+...+.|+++| |+...++++++++|+.+.+.-.. +.+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~---p~~--- 100 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGH---PVS--- 100 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGC---BSS---
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccc---ccc---
Confidence 35799999985 455566664 4679999999999999999999 44225789999999764311000 000
Q ss_pred cccccccccCCCCCCCCC------CCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE-Eec
Q 004133 619 VVHGNEITSNNTRSCNGN------CTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV-NLV 691 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~------~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~-Nl~ 691 (772)
. ...+.... .......||+|++|.+.. ..++..+...|+|||++++ |+.
T Consensus 101 -------~--~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------------~~~~~~~l~~l~~GG~Iv~DNv~ 156 (202)
T 3cvo_A 101 -------D--AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR---------------VGCALATAFSITRPVTLLFDDYS 156 (202)
T ss_dssp -------S--TTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH---------------HHHHHHHHHHCSSCEEEEETTGG
T ss_pred -------c--hhhhhHHHHhhhhhccccCCCCCEEEEeCCCc---------------hhHHHHHHHhcCCCeEEEEeCCc
Confidence 0 00000000 000125799999987432 3666777799999999988 554
Q ss_pred CC
Q 004133 692 SR 693 (772)
Q Consensus 692 ~~ 693 (772)
.+
T Consensus 157 ~r 158 (202)
T 3cvo_A 157 QR 158 (202)
T ss_dssp GC
T ss_pred CC
Confidence 44
No 357
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.53 E-value=1.9e-07 Score=95.22 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=80.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..+....+ +|++||+++.+++.|++.+.- +++++.+|..+. ..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~---~~------------ 100 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD----GITYIHSRFEDA---QL------------ 100 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC---CC------------
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc---Cc------------
Confidence 456899999999999999988764 799999999999999999852 799999998664 11
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHH-HccCCCcEEEEEecCCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK-DALSEQGLFIVNLVSRS 694 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~-~~L~~~Gilv~Nl~~~~ 694 (772)
+..||+|++-- ....+.. ...+|+.++ +.|+|||.+++......
T Consensus 101 -------------------~~~fD~v~~~~----~l~~~~~------~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 101 -------------------PRRYDNIVLTH----VLEHIDD------PVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp -------------------SSCEEEEEEES----CGGGCSS------HHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred -------------------CCcccEEEEhh----HHHhhcC------HHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 36799999721 1111111 268999999 99999999999876543
No 358
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.53 E-value=2e-07 Score=95.53 Aligned_cols=117 Identities=19% Similarity=0.191 Sum_probs=87.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||++|+|.|.++..+... ..+|++||+++.+++.|++.+ ++ +++++++.+|..+...
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~------------ 154 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDAEV------------ 154 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTSCC------------
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhccc------------
Confidence 4568999999999999988888 569999999999999999886 43 4679999998765310
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
....||+|+.|.. + | ..+++.+.+.|+|||.+++...+. ...
T Consensus 155 ---------------------~~~~~D~v~~~~~--~-------~------~~~l~~~~~~L~~gG~l~~~~~~~--~~~ 196 (248)
T 2yvl_A 155 ---------------------PEGIFHAAFVDVR--E-------P------WHYLEKVHKSLMEGAPVGFLLPTA--NQV 196 (248)
T ss_dssp ---------------------CTTCBSEEEECSS--C-------G------GGGHHHHHHHBCTTCEEEEEESSH--HHH
T ss_pred ---------------------CCCcccEEEECCc--C-------H------HHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 1256999998532 1 1 467999999999999999877543 333
Q ss_pred HHHHHHHHHhccce
Q 004133 699 DMVISRMKMVFNHL 712 (772)
Q Consensus 699 ~~v~~~l~~vF~~v 712 (772)
..+...+++.|..+
T Consensus 197 ~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 197 IKLLESIENYFGNL 210 (248)
T ss_dssp HHHHHHSTTTEEEE
T ss_pred HHHHHHHHhhCCcc
Confidence 44555555445443
No 359
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.52 E-value=5.9e-07 Score=94.39 Aligned_cols=88 Identities=10% Similarity=0.057 Sum_probs=71.8
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+.+.+.. .++ +|||+|||+|.++..|++.+. +|+++|+++.|++.++++.. ..+++++++|+.+++
T Consensus 33 ~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~- 104 (271)
T 3fut_A 33 EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYP- 104 (271)
T ss_dssp HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSC-
T ss_pred HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCC-
Confidence 3555666666655 567 999999999999999999974 69999999999999988874 358999999999988
Q ss_pred ccCC-CccEEEeccccc
Q 004133 131 FMDE-TFDVILDKGGLD 146 (772)
Q Consensus 131 ~~~~-sfDvVi~~~~l~ 146 (772)
+++. .+|.|+++-..+
T Consensus 105 ~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 105 WEEVPQGSLLVANLPYH 121 (271)
T ss_dssp GGGSCTTEEEEEEECSS
T ss_pred hhhccCccEEEecCccc
Confidence 6643 689988876544
No 360
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.52 E-value=3.4e-07 Score=97.50 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=82.3
Q ss_pred CCCCeEEEEcccccHHHHHHH-HhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLH-ECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~-~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
....+||.||+|.|.+...+. ...|..+|++||+++.+++.|++.+.-. ..++++++.+|+.++ .
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--------- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL----D--------- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC----C---------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC----C---------
Confidence 456789999999999988874 5668889999999999999999988422 245799999998763 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
. ...||+|++.. . ...+ +..-....+|+.+++.|+|||.|++..+.+
T Consensus 184 --------------------~-~~~fD~v~~~~--~--~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 184 --------------------T-REGYDLLTSNG--L--NIYE---PDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp --------------------C-CSCEEEEECCS--S--GGGC---CCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred --------------------c-cCCeEEEEECC--h--hhhc---CCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 1 26799999621 0 0000 000111248999999999999999887553
No 361
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.52 E-value=1.8e-07 Score=98.43 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=92.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.+|+|.|.++..+....+..+|++||++|.+++.|++.+....-+++.++.+|+.++ ..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-------------- 183 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-------------- 183 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--------------
Confidence 456899999999999999999887779999999999999999987332224688999999876 22
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCCh---hHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ---ATK 698 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~---~~~ 698 (772)
..+||+|++|.- . --.+++..+.+.|+|+|++++....... +..
T Consensus 184 -------------------~~~~D~Vi~d~p------------~--~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~ 230 (272)
T 3a27_A 184 -------------------KDVADRVIMGYV------------H--KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERP 230 (272)
T ss_dssp -------------------TTCEEEEEECCC------------S--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHH
T ss_pred -------------------cCCceEEEECCc------------c--cHHHHHHHHHHHcCCCCEEEEEEcCccccccccH
Confidence 256999999631 1 2256899999999999999987765422 334
Q ss_pred HHHHHHHHHhcc
Q 004133 699 DMVISRMKMVFN 710 (772)
Q Consensus 699 ~~v~~~l~~vF~ 710 (772)
...++.+.+.+.
T Consensus 231 ~~~~~~~~~~~~ 242 (272)
T 3a27_A 231 IERLKFYAEKNG 242 (272)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 455677776553
No 362
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.52 E-value=1.6e-06 Score=84.70 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=87.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
+...+||.||+|.|.++..+... ..++++||+++.+++.|++.+ ++++++.+|..++ .
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 102 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVD----Q----------- 102 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTS----C-----------
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccC----C-----------
Confidence 45679999999999999988887 359999999999999999987 3588999987653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 700 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 700 (772)
.....||+|++....- ..+ +++ .-..+|+.+.+.|+|||.+++............
T Consensus 103 ------------------~~~~~~D~i~~~~~~~---~~~--~~~--~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~ 157 (195)
T 3cgg_A 103 ------------------ISETDFDLIVSAGNVM---GFL--AED--GREPALANIHRALGADGRAVIGFGAGRGWVFGD 157 (195)
T ss_dssp ------------------CCCCCEEEEEECCCCG---GGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHH
T ss_pred ------------------CCCCceeEEEECCcHH---hhc--ChH--HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHH
Confidence 0135799999831100 000 001 126899999999999999999886654333445
Q ss_pred HHHHHHHh-cc
Q 004133 701 VISRMKMV-FN 710 (772)
Q Consensus 701 v~~~l~~v-F~ 710 (772)
+...+.+. |.
T Consensus 158 ~~~~l~~~Gf~ 168 (195)
T 3cgg_A 158 FLEVAERVGLE 168 (195)
T ss_dssp HHHHHHHHTEE
T ss_pred HHHHHHHcCCE
Confidence 55555554 44
No 363
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.52 E-value=4.5e-07 Score=94.27 Aligned_cols=121 Identities=16% Similarity=0.146 Sum_probs=89.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.+|+|.|.++..+....+ +|++||+||.+++.|++.+....-. ++++.+|..+.+ .
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~---~----------- 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAAL---P----------- 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHG---G-----------
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcC---c-----------
Confidence 3457999999999999999888754 9999999999999999987322112 899999988753 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 700 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 700 (772)
..+||+|+.+.... .-..++..+.+.|+|||.+++.-+... ..+.
T Consensus 182 --------------------~~~fD~Vv~n~~~~-------------~~~~~l~~~~~~LkpgG~lils~~~~~--~~~~ 226 (254)
T 2nxc_A 182 --------------------FGPFDLLVANLYAE-------------LHAALAPRYREALVPGGRALLTGILKD--RAPL 226 (254)
T ss_dssp --------------------GCCEEEEEEECCHH-------------HHHHHHHHHHHHEEEEEEEEEEEEEGG--GHHH
T ss_pred --------------------CCCCCEEEECCcHH-------------HHHHHHHHHHHHcCCCCEEEEEeeccC--CHHH
Confidence 14699999853111 126899999999999999998643332 2355
Q ss_pred HHHHHHHh-ccceE
Q 004133 701 VISRMKMV-FNHLF 713 (772)
Q Consensus 701 v~~~l~~v-F~~v~ 713 (772)
+.+.+++. |.-+.
T Consensus 227 v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 227 VREAMAGAGFRPLE 240 (254)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 66667666 65433
No 364
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.52 E-value=1.8e-06 Score=83.55 Aligned_cols=115 Identities=9% Similarity=0.047 Sum_probs=87.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+.. +..++++||+++.+++.|++.+....-++++++.+|..+.+..
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~------------- 98 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK------------- 98 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG-------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC-------------
Confidence 3456899999999999998888 6779999999999999999987221125799999999874222
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 700 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 700 (772)
..||+|+++.. -.-..+++.+++. |||.+++.... ......
T Consensus 99 ---------------------~~~D~i~~~~~--------------~~~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~ 139 (183)
T 2yxd_A 99 ---------------------LEFNKAFIGGT--------------KNIEKIIEILDKK--KINHIVANTIV--LENAAK 139 (183)
T ss_dssp ---------------------CCCSEEEECSC--------------SCHHHHHHHHHHT--TCCEEEEEESC--HHHHHH
T ss_pred ---------------------CCCcEEEECCc--------------ccHHHHHHHHhhC--CCCEEEEEecc--cccHHH
Confidence 46999998432 1237889999988 99999987743 333455
Q ss_pred HHHHHHHhc
Q 004133 701 VISRMKMVF 709 (772)
Q Consensus 701 v~~~l~~vF 709 (772)
+.+.+++..
T Consensus 140 ~~~~l~~~g 148 (183)
T 2yxd_A 140 IINEFESRG 148 (183)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 677777664
No 365
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.52 E-value=7.1e-07 Score=89.52 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=93.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|.... .+|++||+++.+++.|++.+.- .++++++.+|..++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~--------------- 110 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS--------------- 110 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC---------------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC---------------
Confidence 455789999999999999998875 4899999999999999999853 358999999986642
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc----HHHHHHHHHccCCCcEEEEEecCC---
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSR--- 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~~~--- 693 (772)
...+||+|++.- . -.++-+ ..+|+.+++.|+|||++++.....
T Consensus 111 -------------------~~~~fD~v~~~~--~---------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 160 (216)
T 3ofk_A 111 -------------------TAELFDLIVVAE--V---------LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATC 160 (216)
T ss_dssp -------------------CSCCEEEEEEES--C---------GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred -------------------CCCCccEEEEcc--H---------HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcc
Confidence 136799999831 1 112222 467999999999999999865322
Q ss_pred ----ChhHHHHHHHHHHHhccceEEEee
Q 004133 694 ----SQATKDMVISRMKMVFNHLFCLQL 717 (772)
Q Consensus 694 ----~~~~~~~v~~~l~~vF~~v~~~~~ 717 (772)
.....+.+...+.+.|..+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 188 (216)
T 3ofk_A 161 RRWGHVAGAETVITILTEALTEVERVQC 188 (216)
T ss_dssp HHTTCSCCHHHHHHHHHHHSEEEEEEEE
T ss_pred hhhhhhhhHHHHHHHHHhhccceEEEec
Confidence 112234556667777776655543
No 366
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.51 E-value=3.7e-07 Score=95.61 Aligned_cols=117 Identities=16% Similarity=0.210 Sum_probs=88.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHHhcCCC---CCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT---QDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fg~~---~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.+|+|.|.++..|... .|..+|++||+++.+++.|++.+... ..++++++.+|+.+. ..
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~-------- 167 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--EL-------- 167 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CC--------
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CC--------
Confidence 34568999999999999988885 46789999999999999999987210 135799999998653 01
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 696 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 696 (772)
....||+|++|+.. | ..+++.+.+.|+|||.+++...+. +
T Consensus 168 -----------------------~~~~~D~v~~~~~~---------~------~~~l~~~~~~L~pgG~l~~~~~~~--~ 207 (280)
T 1i9g_A 168 -----------------------PDGSVDRAVLDMLA---------P------WEVLDAVSRLLVAGGVLMVYVATV--T 207 (280)
T ss_dssp -----------------------CTTCEEEEEEESSC---------G------GGGHHHHHHHEEEEEEEEEEESSH--H
T ss_pred -----------------------CCCceeEEEECCcC---------H------HHHHHHHHHhCCCCCEEEEEeCCH--H
Confidence 13569999996531 1 378999999999999999987543 3
Q ss_pred HHHHHHHHHHH
Q 004133 697 TKDMVISRMKM 707 (772)
Q Consensus 697 ~~~~v~~~l~~ 707 (772)
....++..+++
T Consensus 208 ~~~~~~~~l~~ 218 (280)
T 1i9g_A 208 QLSRIVEALRA 218 (280)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 34456666765
No 367
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.51 E-value=2.1e-07 Score=93.72 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=79.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-----CCCeEEEEccHHHHHHhhcccCccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATD 615 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-----~~rl~v~i~Dg~~~l~~~~~~~~~~ 615 (772)
..+.+||.||+|.|.++..|....|..++++||+++.+++.|++.+.... .++++++.+|... ..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY----RD------ 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS----CC------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc----cc------
Confidence 34679999999999999999998887899999999999999999874211 1379999999621 11
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEe
Q 004133 616 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 690 (772)
....+||+|++.- . -..+-+ ..+|+.+++.|+|||+++...
T Consensus 98 -----------------------~~~~~fD~V~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 98 -----------------------KRFSGYDAATVIE----V-------IEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp -----------------------GGGTTCSEEEEES----C-------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -----------------------cccCCCCEEEEHH----H-------HHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 0135799999721 1 112222 479999999999999877643
No 368
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.51 E-value=2.8e-07 Score=97.75 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=42.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 586 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F 586 (772)
...+||.||+|.|.++..|...++..+|++||+|+.+++.|++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 467999999999999999999998889999999999999999886
No 369
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.51 E-value=3.1e-07 Score=95.16 Aligned_cols=104 Identities=13% Similarity=0.206 Sum_probs=77.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|....+ +|++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l----~----------- 98 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM----P----------- 98 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC----C-----------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC----C-----------
Confidence 4567999999999999999988864 8999999999999999886211124799999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
..+..||+|+...-- ..+. -...+|..+++.|+|||.|++-
T Consensus 99 ------------------~~~~~fD~V~~~~~l----~~~~------d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 ------------------FTDERFHIVTCRIAA----HHFP------NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ------------------SCTTCEEEEEEESCG----GGCS------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------CCCCCEEEEEEhhhh----HhcC------CHHHHHHHHHHHcCCCCEEEEE
Confidence 113679999974211 1111 1268999999999999999874
No 370
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.51 E-value=2.3e-07 Score=96.82 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
+...+||.||+|+|.++..|...+ .+|++||+++.|++.|+++ ++++++++|+.+. .
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~----~----------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH------PRVTYAVAPAEDT----G----------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC------TTEEEEECCTTCC----C-----------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc------CCceeehhhhhhh----c-----------
Confidence 455789999999999999998876 4899999999999988753 5799999997432 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
..+..||+|++ ..... .+-...+|..+++.|+|||+|++-....
T Consensus 95 ------------------~~~~sfD~v~~----~~~~h-------~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 95 ------------------LPPASVDVAIA----AQAMH-------WFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp ------------------CCSSCEEEEEE----CSCCT-------TCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ------------------ccCCcccEEEE----eeehh-------HhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 12478999998 11111 1123679999999999999998765443
No 371
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.50 E-value=3.2e-07 Score=91.75 Aligned_cols=105 Identities=14% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|... ..+|++||+++.+++.|++ .+. ++++++.+|..++ ..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~-~~~---~~~~~~~~d~~~~---~~----------- 104 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR-HGL---DNVEFRQQDLFDW---TP----------- 104 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG-GCC---TTEEEEECCTTSC---CC-----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh-cCC---CCeEEEecccccC---CC-----------
Confidence 34569999999999999999888 4599999999999999999 343 6799999998654 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEecCCChh
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLVSRSQA 696 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 696 (772)
..+||+|++.. . -.++-+ ..+|+.+++.|+|||.+++....+...
T Consensus 105 --------------------~~~~D~v~~~~--~---------l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 152 (218)
T 3ou2_A 105 --------------------DRQWDAVFFAH--W---------LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHER 152 (218)
T ss_dssp --------------------SSCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-
T ss_pred --------------------CCceeEEEEec--h---------hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCcc
Confidence 36799999832 1 112222 689999999999999999988766433
No 372
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.50 E-value=2.1e-07 Score=98.06 Aligned_cols=119 Identities=10% Similarity=0.045 Sum_probs=89.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++..+....+. +|++||++|.+++.|++..... -+++++++.+|+.++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------------- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------------- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------------
Confidence 3578999999999999999988765 8999999999999999887321 14579999999877632
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC----hh
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----QA 696 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----~~ 696 (772)
..+||+|++|. | .....++..+.+.|+|||++++-..+.. ..
T Consensus 190 --------------------~~~fD~Vi~~~------------p--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 235 (278)
T 2frn_A 190 --------------------ENIADRILMGY------------V--VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPRE 235 (278)
T ss_dssp --------------------CSCEEEEEECC------------C--SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTT
T ss_pred --------------------cCCccEEEECC------------c--hhHHHHHHHHHHHCCCCeEEEEEEeecccccccc
Confidence 25799999942 1 1226789999999999999998655432 33
Q ss_pred HHHHHHHHHHHhc
Q 004133 697 TKDMVISRMKMVF 709 (772)
Q Consensus 697 ~~~~v~~~l~~vF 709 (772)
..+.+...+.+..
T Consensus 236 ~~~~i~~~~~~~G 248 (278)
T 2frn_A 236 PFETFKRITKEYG 248 (278)
T ss_dssp THHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 4455555555543
No 373
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.50 E-value=5.8e-07 Score=86.58 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=92.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+..... ++++||+++.+++.|++. .++++++.+| . ..
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~----~~------------ 71 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-----FDSVITLSDP-K----EI------------ 71 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----CTTSEEESSG-G----GS------------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-C----CC------------
Confidence 4556899999999999999988863 999999999999999998 3579999998 1 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh----
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA---- 696 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~---- 696 (772)
....||+|++..--. .+. -...+++.+++.|+|||.+++..+.....
T Consensus 72 -------------------~~~~~D~v~~~~~l~----~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 122 (170)
T 3i9f_A 72 -------------------PDNSVDFILFANSFH----DMD------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGP 122 (170)
T ss_dssp -------------------CTTCEEEEEEESCST----TCS------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS
T ss_pred -------------------CCCceEEEEEccchh----ccc------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCc
Confidence 136799999732111 111 13789999999999999999876544311
Q ss_pred ------HHHHHHHHHHHhccceEEEeecCCceEEEEEecCC
Q 004133 697 ------TKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 697 ------~~~~v~~~l~~vF~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
..+.+.+.++ =|..+...... .....+++....
T Consensus 123 ~~~~~~~~~~~~~~l~-Gf~~~~~~~~~-~~~~~l~~~~~~ 161 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS-NFVVEKRFNPT-PYHFGLVLKRKT 161 (170)
T ss_dssp CGGGCCCHHHHHHHTT-TEEEEEEECSS-TTEEEEEEEECC
T ss_pred hHhhhcCHHHHHHHHh-CcEEEEccCCC-CceEEEEEecCC
Confidence 1233344444 45444444433 345555555444
No 374
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.49 E-value=2.1e-07 Score=96.16 Aligned_cols=109 Identities=12% Similarity=0.153 Sum_probs=83.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+...+ ..+|++||+++.+++.|++.+.-. ++++++.+|+.+. .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~----~----------- 115 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTK----E----------- 115 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTC----C-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccC----C-----------
Confidence 456799999999999999998876 569999999999999999998643 7899999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|+... ....+ |+. --..+|+.+++.|+|||.+++..+..
T Consensus 116 ------------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 116 ------------------FPENNFDLIYSRD----AILAL--SLE--NKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp ------------------CCTTCEEEEEEES----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEeHHH----HHHhc--ChH--HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 1136799999831 10111 011 12679999999999999999876543
No 375
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.49 E-value=3.7e-07 Score=94.05 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|...+ ..++++||++|.+++.|++.+ |+ .++++++.+|+.+..
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~------------ 99 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAGYV------------ 99 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTTCC------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHhCC------------
Confidence 345789999999999999999887 458999999999999999886 44 458999999976531
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
. ...||+|++- ..- ..+. --..+|+.+++.|+|||.+++..
T Consensus 100 ---------------------~-~~~fD~V~~~-~~~---~~~~------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 ---------------------A-NEKCDVAACV-GAT---WIAG------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ---------------------C-SSCEEEEEEE-SCG---GGTS------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---------------------c-CCCCCEEEEC-CCh---HhcC------CHHHHHHHHHHHcCCCeEEEEec
Confidence 0 2579999971 111 0010 12889999999999999999854
No 376
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.48 E-value=2.1e-06 Score=86.24 Aligned_cols=101 Identities=14% Similarity=0.162 Sum_probs=78.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|... ..++++||+++.+++.|++.+. .+++++.+|+.++ .
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~----~----------- 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSF----E----------- 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSC----C-----------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhc----C-----------
Confidence 35679999999999999998887 4699999999999999999986 5789998887553 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEecC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
.. ..||+|++.. . -..+-+ ..+|+.+++.|+|||.+++....
T Consensus 103 ------------------~~-~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 103 ------------------VP-TSIDTIVSTY--A---------FHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp ------------------CC-SCCSEEEEES--C---------GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ------------------CC-CCeEEEEECc--c---------hhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 11 5799999842 1 111222 33999999999999999988543
No 377
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.48 E-value=2.3e-07 Score=94.70 Aligned_cols=139 Identities=19% Similarity=0.180 Sum_probs=97.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|.|.++..+....|..+|++||+||..++.|++.. |+ +++++++.+|+.+-+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~----------- 81 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE----------- 81 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc-----------
Confidence 446899999999999999999988889999999999999999886 55 46899999999764321
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
...||+|++- ||- .-+-.++|..+...|+++|.||++-....
T Consensus 82 ----------------------~~~~D~Ivia--------G~G----g~~i~~Il~~~~~~L~~~~~lVlq~~~~~---- 123 (225)
T 3kr9_A 82 ----------------------TDQVSVITIA--------GMG----GRLIARILEEGLGKLANVERLILQPNNRE---- 123 (225)
T ss_dssp ----------------------GGCCCEEEEE--------EEC----HHHHHHHHHHTGGGCTTCCEEEEEESSCH----
T ss_pred ----------------------CcCCCEEEEc--------CCC----hHHHHHHHHHHHHHhCCCCEEEEECCCCH----
Confidence 1259999871 221 11237899999999999999999876322
Q ss_pred HHHHHHHHHh-ccceEEEeecCC--ceEEEEEecCC
Q 004133 699 DMVISRMKMV-FNHLFCLQLEED--VNLVLFGLSSE 731 (772)
Q Consensus 699 ~~v~~~l~~v-F~~v~~~~~~~~--~N~vl~a~~~~ 731 (772)
..+...|.+. |.-+-..-+.++ .=+|+.+.+.+
T Consensus 124 ~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~~ 159 (225)
T 3kr9_A 124 DDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGQ 159 (225)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 3344444443 432222222222 23566666543
No 378
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.48 E-value=6.3e-07 Score=85.91 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=89.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHH--HhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFV--REMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l--~~~~~~~~~~~~ 617 (772)
....+||.+|+|.|.++..+...+ |..++++||+++ ++++ ++++++.+|..+.- +....
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~------- 82 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLE------- 82 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHH-------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhc-------
Confidence 345699999999999999998885 667999999999 6532 57999999986641 11100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcC-C----CcHHHHHHHHHccCCCcEEEEEecC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD-F----VEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~-f----~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
......||+|+.|..-. ..+. +... . +...+++.+.+.|+|||.+++....
T Consensus 83 --------------------~~~~~~~D~i~~~~~~~--~~~~--~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 83 --------------------RVGDSKVQVVMSDMAPN--MSGT--PAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp --------------------HHTTCCEEEEEECCCCC--CCSC--HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred --------------------cCCCCceeEEEECCCcc--ccCC--CccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 00135799999853211 0000 0000 0 0168999999999999999998765
Q ss_pred CChhHHHHHHHHHHHhccceEEEe
Q 004133 693 RSQATKDMVISRMKMVFNHLFCLQ 716 (772)
Q Consensus 693 ~~~~~~~~v~~~l~~vF~~v~~~~ 716 (772)
.... ..+...++..|..+....
T Consensus 139 ~~~~--~~~~~~~~~~~~~~~~~~ 160 (180)
T 1ej0_A 139 GEGF--DEYLREIRSLFTKVKVRK 160 (180)
T ss_dssp STTH--HHHHHHHHHHEEEEEEEC
T ss_pred CCcH--HHHHHHHHHhhhhEEeec
Confidence 4332 456777888887766554
No 379
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.48 E-value=1.7e-07 Score=94.53 Aligned_cols=107 Identities=17% Similarity=0.227 Sum_probs=80.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|.|.++..+....+ ++++||++|.+++.|++.+... .++++++.+|..++ .
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~------------ 98 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKL----S------------ 98 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSC----C------------
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-CCCceEEECchhcC----C------------
Confidence 367999999999999999998876 8999999999999999987432 26799999997542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
.....||+|++.-- - ... +.. -...+++.+++.|+|||.+++....
T Consensus 99 -----------------~~~~~~D~v~~~~~-~-~~~----~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 -----------------FEDKTFDYVIFIDS-I-VHF----EPL--ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp -----------------SCTTCEEEEEEESC-G-GGC----CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------CCCCcEEEEEEcCc-h-HhC----CHH--HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 01357999997411 0 000 000 1267999999999999999988654
No 380
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.48 E-value=5.6e-07 Score=102.12 Aligned_cols=132 Identities=14% Similarity=0.193 Sum_probs=97.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
...+||.+|+|.|..+..|...++ ..+|++||+++.+++.+++.. |+ .+++++.+|+.++....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~~--------- 184 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAAV--------- 184 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHHS---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhhc---------
Confidence 457899999999999999999875 469999999999999999876 65 36999999998864322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCc-CCcCC-------------CcHHHHHHHHHccCCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTC-PAADF-------------VEGSFLLTVKDALSEQ 683 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~-Pp~~f-------------~~~~fl~~~~~~L~~~ 683 (772)
...||+|++|+-.+. .|+.. .|... +...+|..+.+.|+||
T Consensus 185 -----------------------~~~fD~Il~D~PcSg--~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 185 -----------------------PEMFDAILLDAPCSG--EGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp -----------------------TTCEEEEEEECCCCC--GGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred -----------------------cccCCEEEECCCcCC--cccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 256999999984431 12211 11111 1357899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhcc
Q 004133 684 GLFIVNLVSRSQATKDMVISRMKMVFN 710 (772)
Q Consensus 684 Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 710 (772)
|.||+...+-..+..+.++..+.+-++
T Consensus 240 G~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 240 GTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CEEEEecccCCcccCHHHHHHHHHHCC
Confidence 999998766655544556666554444
No 381
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.47 E-value=9.5e-07 Score=88.66 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=80.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..|... ..++++||+++.+++.|++. .+++++.+|..++.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~----------- 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV----------- 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-----------
Confidence 34589999999999999999887 45899999999999999988 357889999877632211
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
..+.+||+|++..--. .. --..+|+.+++.|+|||.+++.....
T Consensus 112 ------------------~~~~~fD~v~~~~~l~-----~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 112 ------------------PVGKDYDLICANFALL-----HQ------DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp ------------------CCCCCEEEEEEESCCC-----SS------CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ------------------ccCCCccEEEECchhh-----hh------hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 1135699999842111 11 12689999999999999999987643
No 382
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.46 E-value=5.1e-07 Score=92.07 Aligned_cols=105 Identities=13% Similarity=0.100 Sum_probs=81.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
+...+||.||+|.|.++..+... ..+|++||+++.+++.|++.. ..++++++.+|+.++ .
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~----~----------- 111 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSL----P----------- 111 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBC----S-----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcC----C-----------
Confidence 35579999999999999999887 458999999999999999986 347899999997643 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|++-.. ...+. -...+|+.+++.|+|||.+++.....
T Consensus 112 ------------------~~~~~fD~v~~~~~----l~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 112 ------------------FENEQFEAIMAINS----LEWTE------EPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ------------------SCTTCEEEEEEESC----TTSSS------CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------------CCCCCccEEEEcCh----Hhhcc------CHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 11367999997311 11111 12589999999999999999987554
No 383
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.46 E-value=2.4e-07 Score=92.41 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=82.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+....+. +|++||+++.+++.|++.+.- .++++++.+|+.++ ..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~--~~------------ 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL--DF------------ 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC--CS------------
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC--CC------------
Confidence 34578999999999999988887544 899999999999999998752 46899999997653 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcC---CcC-----C-CcHHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCP---AAD-----F-VEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~P---p~~-----f-~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
....||+|+...-- ..+.|. +.. . -...+|+.+.+.|+|||.+++...
T Consensus 104 -------------------~~~~fD~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 104 -------------------PSASFDVVLEKGTL----DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp -------------------CSSCEEEEEEESHH----HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -------------------CCCcccEEEECcch----hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 13579999963210 000000 110 0 127899999999999999999876
Q ss_pred CC
Q 004133 692 SR 693 (772)
Q Consensus 692 ~~ 693 (772)
+.
T Consensus 161 ~~ 162 (215)
T 2pxx_A 161 AA 162 (215)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 384
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.46 E-value=1.2e-06 Score=101.09 Aligned_cols=175 Identities=9% Similarity=0.081 Sum_probs=112.7
Q ss_pred ccccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc----C---------------CCeEEEEeCCHHHHH
Q 004133 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G---------------FHGITNVDFSKVVIS 105 (772)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~----g---------------~~~V~gvDiS~~~I~ 105 (772)
++|.. ..+...+.+.+.. .++.+|||+|||+|.++..+++. + ..+++|+|+++.+++
T Consensus 150 ~fyTP-~~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 150 QYFTP-RPLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp CCCCC-HHHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred eeeCC-HHHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 34433 4566677777764 56789999999999999877653 1 126999999999999
Q ss_pred HHHHHhccCCC-C-----cEEEEeeccCcccccCCCccEEEecccccccccCc--c-----chHHHHHHHHHHHhccccC
Q 004133 106 DMLRRNVRDRS-D-----MRWRVMDMTSMQVFMDETFDVILDKGGLDALMEPE--L-----GHKLGNQYLSEVKRLLKSG 172 (772)
Q Consensus 106 ~a~~~~~~~~~-~-----v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~~~~--~-----~~~~~~~~l~ei~rvLkpG 172 (772)
.|+.++.-++. . ..+.++|....+....+.||+|+++..+....... . .......+++.+.+.||||
T Consensus 226 lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 226 LALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp HHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 99876543332 2 78999998765413457899999987665432210 0 0011247899999999999
Q ss_pred eEEEEEEcCc--------hhhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEecCC
Q 004133 173 GKFVCLTLAE--------SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 226 (772)
Q Consensus 173 G~~ii~~~~~--------~~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~~ 226 (772)
|++.++.... ..+++.|+.. .+...+..++...=.....+..+.+++|.+.
T Consensus 306 Gr~a~V~p~~~L~~~~~~~~iR~~L~~~---~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 306 GRAAVVVPDNVLFEGGKGTDIRRDLMDK---CHLHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp EEEEEEEEHHHHHCCTHHHHHHHHHHHH---EEEEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred CEEEEEecCcceecCcHHHHHHHHHhhc---CCEEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 9998875321 1123333332 2334444554311123356677888888654
No 385
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.46 E-value=2.8e-07 Score=94.41 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=78.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..|.... ..+|++||+++.+++.|++.+.-....+++++.+|..++ .
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF----T------------ 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC----C------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc----C------------
Confidence 56899999999999998887765 459999999999999999998532234689999996543 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
.....||+|+++.-- ..+ |.+. -..+|+.+++.|+|||.+++..
T Consensus 142 -----------------~~~~~fD~v~~~~~l----~~~--~~~~--~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 142 -----------------PEPDSYDVIWIQWVI----GHL--TDQH--LAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp -----------------CCSSCEEEEEEESCG----GGS--CHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------CCCCCEEEEEEcchh----hhC--CHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 113579999985210 001 1100 1479999999999999999843
No 386
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.45 E-value=3.3e-07 Score=93.80 Aligned_cols=140 Identities=19% Similarity=0.170 Sum_probs=99.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
+...+||.||+|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+.+.+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~~---------- 87 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFEE---------- 87 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG----------
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhcccc----------
Confidence 3447899999999999999999988779999999999999999886 55 56899999999875422
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
+..||+|++- ||- .-+-.++|......|+++|.||+.-...
T Consensus 88 -----------------------~~~~D~Ivia--------GmG----g~lI~~IL~~~~~~l~~~~~lIlqp~~~---- 128 (230)
T 3lec_A 88 -----------------------ADNIDTITIC--------GMG----GRLIADILNNDIDKLQHVKTLVLQPNNR---- 128 (230)
T ss_dssp -----------------------GGCCCEEEEE--------EEC----HHHHHHHHHHTGGGGTTCCEEEEEESSC----
T ss_pred -----------------------ccccCEEEEe--------CCc----hHHHHHHHHHHHHHhCcCCEEEEECCCC----
Confidence 1369999871 221 1134778999999999999999887543
Q ss_pred HHHHHHHHHHh-ccceEEEeecCC--ceEEEEEecCC
Q 004133 698 KDMVISRMKMV-FNHLFCLQLEED--VNLVLFGLSSE 731 (772)
Q Consensus 698 ~~~v~~~l~~v-F~~v~~~~~~~~--~N~vl~a~~~~ 731 (772)
.+.+...|.+. |.-+-..-+.++ .=+|+.+.+.+
T Consensus 129 ~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~~ 165 (230)
T 3lec_A 129 EDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHGH 165 (230)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEECC
T ss_pred hHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 23344444444 432222222222 34567776654
No 387
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.44 E-value=7.8e-07 Score=93.23 Aligned_cols=103 Identities=15% Similarity=0.246 Sum_probs=80.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|.. +..+|++||+++.+++.|++.+ ++++++++|+.++ .
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF----R----------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC----C-----------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC----C-----------
Confidence 3557999999999999998888 6679999999999999999986 5689999987552 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
. ...||+|++.. ....+. --..+|+.+++.|+|||.+++......
T Consensus 114 ------------------~-~~~fD~v~~~~----~l~~~~------d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 114 ------------------V-DKPLDAVFSNA----MLHWVK------EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp ------------------C-SSCEEEEEEES----CGGGCS------CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ------------------c-CCCcCEEEEcc----hhhhCc------CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 0 25799999732 101111 126899999999999999999876653
No 388
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.44 E-value=1.8e-06 Score=89.88 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=81.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+.... ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 124 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDL----P-------- 124 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccC----C--------
Confidence 455799999999999999998876 469999999999999999887 43 46899999997542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
..+..||+|+.-- ....+ |. ...+|+.+++.|+|||.+++..+.
T Consensus 125 ---------------------~~~~~fD~v~~~~----~l~~~--~~----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 125 ---------------------FEDASFDAVWALE----SLHHM--PD----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ---------------------SCTTCEEEEEEES----CTTTS--SC----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCccEEEEec----hhhhC--CC----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 1136799998621 11111 11 278999999999999999976644
No 389
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.44 E-value=5.5e-07 Score=99.52 Aligned_cols=134 Identities=14% Similarity=0.112 Sum_probs=91.8
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-CC-CeEEEEccHHHHHHhhcccCcccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DK-SLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-~~-rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+||.+|+|+|.++..+.... ..+|++||+++.+++.|++.+.... ++ +++++.+|+.+++.....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~---------- 281 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR---------- 281 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH----------
Confidence 4689999999999999988753 3489999999999999999873221 23 799999999999876531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC--cHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV--EGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~--~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
.+.+||+|++|.-....+.+. ..... -.+++..+.+.|+|||++++...+.... .
T Consensus 282 -------------------~~~~fD~Ii~DPP~~~~~~~~---~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~ 338 (385)
T 2b78_A 282 -------------------HHLTYDIIIIDPPSFARNKKE---VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-V 338 (385)
T ss_dssp -------------------TTCCEEEEEECCCCC-----C---CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-H
T ss_pred -------------------hCCCccEEEECCCCCCCChhh---HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-H
Confidence 135799999974221000010 01111 2347788899999999999887555432 2
Q ss_pred HHHHHHHHHhcc
Q 004133 699 DMVISRMKMVFN 710 (772)
Q Consensus 699 ~~v~~~l~~vF~ 710 (772)
+...+.+++.+.
T Consensus 339 ~~~~~~i~~~~~ 350 (385)
T 2b78_A 339 SQFKKQIEKGFG 350 (385)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 344555555554
No 390
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.44 E-value=5.1e-06 Score=91.03 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=79.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+.+.+|..+++++|+ |.+++.|++.+.- ...++++++.+|..+ ..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~----------- 265 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE---TI----------- 265 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---CC-----------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---CC-----------
Confidence 4568999999999999999999999999999999 9999999998721 125789999999752 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH---HHHHHHHHccCCCcEEEEEe
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~---~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++-- . -..+-+. .+|+.+++.|+|||.|++.-
T Consensus 266 ---------------------p~~~D~v~~~~--v---------lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 266 ---------------------PDGADVYLIKH--V---------LHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp ---------------------CSSCSEEEEES--C---------GGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ---------------------CCCceEEEhhh--h---------hccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 12699998721 0 1112223 59999999999999998753
No 391
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.44 E-value=1.1e-06 Score=94.05 Aligned_cols=120 Identities=17% Similarity=0.124 Sum_probs=84.2
Q ss_pred HHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccCcccccC
Q 004133 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQVFMD 133 (772)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~-~~v~f~~~D~~~l~~~~~ 133 (772)
+..++.. .++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++....+ .+++++++|+.++. ...
T Consensus 94 ~~~~l~~---~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~-~~~ 169 (309)
T 2b9e_A 94 PAMLLDP---PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS-PSD 169 (309)
T ss_dssp HHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC-TTC
T ss_pred HHHHhCC---CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC-ccc
Confidence 4445544 57899999999999999999885 33579999999999999988876544 47999999998876 322
Q ss_pred ---CCccEEEec------cccccccc--------Cccch---HHHHHHHHHHHhccccCeEEEEEEcC
Q 004133 134 ---ETFDVILDK------GGLDALME--------PELGH---KLGNQYLSEVKRLLKSGGKFVCLTLA 181 (772)
Q Consensus 134 ---~sfDvVi~~------~~l~~l~~--------~~~~~---~~~~~~l~ei~rvLkpGG~~ii~~~~ 181 (772)
.+||.|+.. +++..-.+ +++-. ....++|+.+.++|+ ||+++..|.+
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 579999863 22221111 01000 113467888888887 9999987765
No 392
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.44 E-value=4.9e-07 Score=95.25 Aligned_cols=107 Identities=21% Similarity=0.222 Sum_probs=83.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
..+.+||.||+|.|.++..+...+|. .+|++||++|.+++.|++.+... ..+++++++|+.++ .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~----~---------- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-PYDSEFLEGDATEI----E---------- 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-SSEEEEEESCTTTC----C----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEcchhhc----C----------
Confidence 45689999999999999999999884 79999999999999999987432 23899999998753 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
. ..+||+|++..--. .+. -...+|+.+++.|+|||.+++....
T Consensus 86 -------------------~-~~~fD~v~~~~~l~----~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -------------------L-NDKYDIAICHAFLL----HMT------TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -------------------C-SSCEEEEEEESCGG----GCS------SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------------------c-CCCeeEEEECChhh----cCC------CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 0 25799999843111 111 1168999999999999999976543
No 393
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.44 E-value=8.9e-07 Score=91.91 Aligned_cols=76 Identities=8% Similarity=0.176 Sum_probs=62.4
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCccc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQV 130 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~ 130 (772)
..+...+.+.+.. .++.+|||+|||+|.++..+++.|..+|+++|+++.+++.++++ ...+++++++|+.+++
T Consensus 17 ~~i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~- 89 (249)
T 3ftd_A 17 EGVLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFP- 89 (249)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCC-
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCC-
Confidence 3455556666654 57889999999999999999998756899999999999988765 3458999999999988
Q ss_pred ccC
Q 004133 131 FMD 133 (772)
Q Consensus 131 ~~~ 133 (772)
+++
T Consensus 90 ~~~ 92 (249)
T 3ftd_A 90 FCS 92 (249)
T ss_dssp GGG
T ss_pred hhH
Confidence 654
No 394
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.43 E-value=1.2e-06 Score=92.56 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=93.9
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
..+||.||+|.|.++..|... |..+|++||+++.++++|++.. |+ .++++++.+|..+.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~~~~------------- 187 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLEPFK------------- 187 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTGGGG-------------
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchhhcc-------------
Confidence 468999999999999999999 8899999999999999999886 44 4579999999877432
Q ss_pred ccccccccCCCCCCCCCCCCCCCce---eEEEEeCCCCCCCCCC-----CcCCcCCC----cHHHHHHHH-HccCCCcEE
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARV---DILIIDVDSPDSSSGM-----TCPAADFV----EGSFLLTVK-DALSEQGLF 686 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~y---D~IivD~~~~d~~~g~-----s~Pp~~f~----~~~fl~~~~-~~L~~~Gil 686 (772)
.+| |+|+.+.--......+ ..|...+. ...|++.+. +.|+|||.|
T Consensus 188 ----------------------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l 245 (284)
T 1nv8_A 188 ----------------------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIV 245 (284)
T ss_dssp ----------------------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEE
T ss_pred ----------------------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEE
Confidence 247 9999952100000001 01111111 127999999 999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHhccceEEEeecCCceEEEEEec
Q 004133 687 IVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLS 729 (772)
Q Consensus 687 v~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~vl~a~~ 729 (772)
++-+.... .+. +.+.|.....++--.+...++++..
T Consensus 246 ~~e~~~~q---~~~----v~~~~~~~~~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 246 LMEIGEDQ---VEE----LKKIVSDTVFLKDSAGKYRFLLLNR 281 (284)
T ss_dssp EEECCTTC---HHH----HTTTSTTCEEEECTTSSEEEEEEEC
T ss_pred EEEECchH---HHH----HHHHHHhCCeecccCCCceEEEEEE
Confidence 98653222 122 3334443222232335567777654
No 395
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.43 E-value=1.3e-06 Score=96.39 Aligned_cols=115 Identities=18% Similarity=0.209 Sum_probs=85.6
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
..+||.+|+|.|.++..+... ..+|++||+++.+++.|++.+....-++++++.+|+.+++.....
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~------------ 275 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK------------ 275 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH------------
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh------------
Confidence 368999999999999999887 458999999999999999987332223399999999999876531
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-----CcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
.+.+||+|++|.-.- +.+ +... .-.+++..+.+.|+|||++++...+..
T Consensus 276 -----------------~~~~fD~Ii~dpP~~----~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 276 -----------------EGERFDLVVLDPPAF----AKG--KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp -----------------TTCCEEEEEECCCCS----CCS--TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred -----------------cCCCeeEEEECCCCC----CCC--hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 135799999964211 100 1111 125688999999999999998765543
No 396
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.42 E-value=2.4e-07 Score=93.90 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=79.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-----CCCcEEEEEcCHHHHHHHHHhcCCCC-----CCCeEEEEccHHHHHHhhccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECM-----PFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSS 611 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~-----p~~~i~~VEiDp~v~~vA~~~Fg~~~-----~~rl~v~i~Dg~~~l~~~~~~ 611 (772)
...+||.||+|.|.++..+.... |..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK- 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc-
Confidence 45799999999999999998876 45699999999999999998873211 35799999998774311000
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 612 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
....||+|+++.... . +++.+.+.|+|||.+++.+.
T Consensus 159 ----------------------------~~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ----------------------------ELGLFDAIHVGASAS-----------E-----LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ----------------------------HHCCEEEEEECSBBS-----------S-----CCHHHHHHEEEEEEEEEEEE
T ss_pred ----------------------------cCCCcCEEEECCchH-----------H-----HHHHHHHhcCCCcEEEEEEc
Confidence 024699999853221 1 24788999999999999986
Q ss_pred C
Q 004133 692 S 692 (772)
Q Consensus 692 ~ 692 (772)
.
T Consensus 195 ~ 195 (227)
T 2pbf_A 195 E 195 (227)
T ss_dssp E
T ss_pred c
Confidence 5
No 397
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.42 E-value=1.3e-06 Score=87.40 Aligned_cols=125 Identities=15% Similarity=0.119 Sum_probs=88.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
+...+||.||+|.|.++..|... ..+|++||+++.+++.|++.++ ++++.+|..+.-
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~------~~~~~~d~~~~~--------------- 98 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLG------RPVRTMLFHQLD--------------- 98 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHT------SCCEECCGGGCC---------------
T ss_pred CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcC------CceEEeeeccCC---------------
Confidence 34579999999999999999887 4599999999999999999983 567778865431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh----
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA---- 696 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~---- 696 (772)
....||+|++.. ....+ |+. --..+|+.+++.|+|||.+++.+......
T Consensus 99 -------------------~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 151 (211)
T 3e23_A 99 -------------------AIDAYDAVWAHA----CLLHV--PRD--ELADVLKLIWRALKPGGLFYASYKSGEGEGRDK 151 (211)
T ss_dssp -------------------CCSCEEEEEECS----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT
T ss_pred -------------------CCCcEEEEEecC----chhhc--CHH--HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc
Confidence 136799999821 10000 000 12579999999999999999987654321
Q ss_pred --------HHHHHHHHHHHh--ccceEEE
Q 004133 697 --------TKDMVISRMKMV--FNHLFCL 715 (772)
Q Consensus 697 --------~~~~v~~~l~~v--F~~v~~~ 715 (772)
..+.+.+.+++. |..+...
T Consensus 152 ~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 152 LARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp TSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred cchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 245566666665 7654443
No 398
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.42 E-value=7.1e-07 Score=95.40 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=82.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+...+ ..+|++||+++.+++.|++.+.- ...++++++.+|..++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------------- 152 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--------------- 152 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC---------------
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC---------------
Confidence 345789999999999999888876 45999999999999999988721 1246799999997543
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCCh
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 695 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~ 695 (772)
...||+|++.- ....+ |+. --..+|+.+.+.|+|||.+++..+....
T Consensus 153 ---------------------~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 153 ---------------------AEPVDRIVSIE----AFEHF--GHE--NYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ---------------------CCCCSEEEEES----CGGGT--CGG--GHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ---------------------CCCcCEEEEeC----hHHhc--CHH--HHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 14699999731 00001 111 1278999999999999999998776543
No 399
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.41 E-value=3.5e-07 Score=96.96 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=82.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCC--CCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT--QDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~--~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|.+.+ +..+|++||+++.+++.|++.+... ..++++++++|+.++-....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-------- 106 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-------- 106 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT--------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccc--------
Confidence 356899999999999999999886 7889999999999999999987321 25789999999865311100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~ 688 (772)
.......||+|++.. . -..+--..+|+.+++.|+|||.|++
T Consensus 107 -------------------~~~~~~~fD~V~~~~--~---------l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 -------------------DSVDKQKIDMITAVE--C---------AHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp -------------------TTTTSSCEEEEEEES--C---------GGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------ccccCCCeeEEeHhh--H---------HHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 000125799999832 1 1111337899999999999999998
No 400
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.41 E-value=6.3e-07 Score=92.48 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|... ..+|++||+++.+++.|++.+ -...++++++.+|+.++ .
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~----~----------- 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAI----P----------- 99 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSC----C-----------
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccC----C-----------
Confidence 45679999999999998888876 368999999999999999998 22357899999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..+..||+|++.. . ...+ + -...+|+.+++.|+|||.+++..
T Consensus 100 ------------------~~~~~fD~v~~~~--~--l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 100 ------------------LPDESVHGVIVVH--L--WHLV---P---DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp ------------------SCTTCEEEEEEES--C--GGGC---T---THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEECC--c--hhhc---C---CHHHHHHHHHHHCCCCcEEEEEe
Confidence 1136799999831 1 0111 0 12789999999999999999873
No 401
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.41 E-value=6.7e-07 Score=91.63 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=78.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+....+ +|++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~----------- 82 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL----P----------- 82 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC----C-----------
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC----C-----------
Confidence 4567999999999999999988764 8999999999999999886211114799999997432 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..+..||+|++..-- ..+. --..+|+.+++.|+|||.+++-.
T Consensus 83 ------------------~~~~~fD~v~~~~~l----~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 83 ------------------FPDDSFDIITCRYAA----HHFS------DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp ------------------SCTTCEEEEEEESCG----GGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEEECCch----hhcc------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 113679999984211 1111 12789999999999999998743
No 402
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.40 E-value=5.5e-07 Score=93.41 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
+.+.+||.||+|.|.++..|.... .+|++||+++.+++.|++.+. +++++.+|..++ .
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~----~----------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDF----S----------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTC----C-----------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHC----C-----------
Confidence 345799999999999999988874 489999999999999999864 789999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC----CcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f----~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
. ...||+|++..+.- ..+ --..+|+.+++.|+|||.|++..
T Consensus 107 ------------------~-~~~fD~v~~~~~~l----------~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 ------------------L-GRRFSAVTCMFSSI----------GHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp ------------------C-SCCEEEEEECTTGG----------GGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ------------------c-cCCcCEEEEcCchh----------hhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 0 36799999832110 111 12478999999999999999964
No 403
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.40 E-value=3.5e-07 Score=100.74 Aligned_cols=101 Identities=13% Similarity=-0.001 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccC---------------CC-CcEEEEeeccCccc
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD---------------RS-DMRWRVMDMTSMQV 130 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~---------------~~-~v~f~~~D~~~l~~ 130 (772)
++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++.... +. ++++.++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3689999999999999999987 5557999999999999998876544 33 38999999987641
Q ss_pred ccCCCccEEEecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 131 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 131 ~~~~sfDvVi~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
...+.||+|+... . .. ...+++.+.+.||+||++++..
T Consensus 127 ~~~~~fD~I~lDP-~---~~-------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GS-------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SC-------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CC-------HHHHHHHHHHhcCCCCEEEEEe
Confidence 1245799998432 1 11 2478899999999999766543
No 404
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.40 E-value=6e-06 Score=86.78 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=85.1
Q ss_pred CCCeEEEEcccc---cHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHH--HHhhcc-cCccc
Q 004133 542 KSVKAVVIGLGA---GLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKS-SSATD 615 (772)
Q Consensus 542 ~~~~vLviGlG~---G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~--l~~~~~-~~~~~ 615 (772)
...+||.||+|. |.+...+....|..+|++||+||.|++.|++.+. ..++++++.+|..+. +-.... ..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~--- 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVRR--- 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHHH---
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhhc---
Confidence 347899999999 9888888888898999999999999999999885 357899999998753 211000 00
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 616 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
.....+||+|++-. . +..-+.. --..+|+.+++.|+|||.|++.....+
T Consensus 152 ----------------------~~d~~~~d~v~~~~--v-----lh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 152 ----------------------MIDFSRPAAIMLVG--M-----LHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp ----------------------HCCTTSCCEEEETT--T-----GGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred ----------------------cCCCCCCEEEEEec--h-----hhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 00014699998711 1 1100111 236899999999999999998887664
No 405
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.40 E-value=7.8e-07 Score=100.33 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=98.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
...+||.+|+|.|..+..|...+++ .+|+++|+++..++.+++.+ |+ ++++++.+|+.++....
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~--------- 326 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEII--------- 326 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSS---------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhh---------
Confidence 4468999999999999999998876 79999999999999999886 55 46999999976541111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC--------------CcHHHHHHHHHccCCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQ 683 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f--------------~~~~fl~~~~~~L~~~ 683 (772)
.+..||+|++|+-.+. .|+....++. +...+|+.+.+.|+||
T Consensus 327 ----------------------~~~~fD~Vl~D~Pcsg--~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 327 ----------------------GEEVADKVLLDAPCTS--SGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp ----------------------CSSCEEEEEEECCCCC--GGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----------------------ccCCCCEEEEcCCCCC--CeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1256999999874431 2221111111 1267899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhccc
Q 004133 684 GLFIVNLVSRSQATKDMVISRMKMVFNH 711 (772)
Q Consensus 684 Gilv~Nl~~~~~~~~~~v~~~l~~vF~~ 711 (772)
|.+++-..+..+...+.++..+-+-++.
T Consensus 383 G~lvy~tcs~~~~ene~~v~~~l~~~~~ 410 (450)
T 2yxl_A 383 GRLLYTTCSIFKEENEKNIRWFLNVHPE 410 (450)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCSS
T ss_pred cEEEEEeCCCChhhHHHHHHHHHHhCCC
Confidence 9999888777766666667766555544
No 406
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.39 E-value=9e-07 Score=89.90 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=78.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|....+ ++++||+++.+++.|++.+ ++++++.+|..++ .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDF----R----------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTC----C-----------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHc----c-----------
Confidence 3557999999999999999988865 8999999999999999986 3589999987643 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
. ...||+|++-.+.-. .+.. +. --..+|+.+++.|+|||.+++..+..
T Consensus 97 ------------------~-~~~~D~v~~~~~~~~---~~~~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 ------------------L-GRKFSAVVSMFSSVG---YLKT-TE--ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ------------------C-SSCEEEEEECTTGGG---GCCS-HH--HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ------------------c-CCCCcEEEEcCchHh---hcCC-HH--HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 0 257999995211110 0100 01 12679999999999999999976544
No 407
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.39 E-value=1.3e-06 Score=91.84 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+....+. +|++||+++.+++.|++.+.- ...++++++.+|..++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------------- 126 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------------- 126 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------------
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------------
Confidence 44579999999999999988866554 999999999999999988621 1246899999997432
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
...||+|++.- ....+ |+. --..+|+.+++.|+|||.+++..+...
T Consensus 127 ---------------------~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 ---------------------DEPVDRIVSIG----AFEHF--GHE--RYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ---------------------CCCCSEEEEES----CGGGT--CTT--THHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ---------------------CCCeeEEEEeC----chhhc--ChH--HHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 14699998731 00001 111 127899999999999999998776543
No 408
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.38 E-value=1.3e-06 Score=88.96 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=80.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+.... ..++++||+++.+++.|++.+.- .+++++.+|..++- .
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~------------ 103 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--L------------ 103 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--C------------
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--C------------
Confidence 355799999999999999888873 23899999999999999998753 47999999976531 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
....||+|++.. ....+. --..+|+.+++.|+|||.+++...
T Consensus 104 -------------------~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 -------------------PQDSFDLAYSSL----ALHYVE------DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -------------------CTTCEEEEEEES----CGGGCS------CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------CCCCceEEEEec----cccccc------hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 136799999732 111111 136899999999999999998764
No 409
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.38 E-value=2.3e-06 Score=94.76 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=79.9
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
..+||.+|+|+|.++..+.... ..|++||+++.+++.|++.+ |+. .+++.+|+.+++....
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~----~~~~~~D~~~~l~~~~---------- 278 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLR----VDIRHGEALPTLRGLE---------- 278 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCC----CEEEESCHHHHHHTCC----------
T ss_pred CCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCC----CcEEEccHHHHHHHhc----------
Confidence 5789999999999999988863 45999999999999999987 542 2577999999987643
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-----CcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
+. ||+|++|.-.- ....... ...+++..+.+.|+|||+|++-..+.
T Consensus 279 ---------------------~~-fD~Ii~dpP~f------~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 279 ---------------------GP-FHHVLLDPPTL------VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ---------------------CC-EEEEEECCCCC------CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ---------------------CC-CCEEEECCCcC------CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 24 99999964210 0001111 12478999999999999998655444
No 410
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.38 E-value=4.6e-06 Score=96.03 Aligned_cols=172 Identities=10% Similarity=0.071 Sum_probs=111.6
Q ss_pred ccchhhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHc--------C--------CCeEEEEeCCHHHHHHHHHH
Q 004133 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------G--------FHGITNVDFSKVVISDMLRR 110 (772)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~--------g--------~~~V~gvDiS~~~I~~a~~~ 110 (772)
|-....+...+.+.+.. .+ .+|||++||+|.+...+++. + ...++|+|+++.+++.|+.+
T Consensus 227 fyTP~~Vv~lmv~ll~p---~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 227 YYTPKSIVTLIVEMLEP---YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp TCCCHHHHHHHHHHHCC---CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHhc---CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 33446777788888864 33 49999999999998776432 1 23699999999999999877
Q ss_pred hccCCCC--cEEEEeeccCcccccCCCccEEEecccccccc--c---------------------CccchHHHHHHHHHH
Q 004133 111 NVRDRSD--MRWRVMDMTSMQVFMDETFDVILDKGGLDALM--E---------------------PELGHKLGNQYLSEV 165 (772)
Q Consensus 111 ~~~~~~~--v~f~~~D~~~l~~~~~~sfDvVi~~~~l~~l~--~---------------------~~~~~~~~~~~l~ei 165 (772)
+.-++.. +.+.++|....+.+.+..||+|+++-.+..-. . +..... --.+++.+
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~-~~~Fl~~~ 381 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNA-NFAWMLHM 381 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCT-HHHHHHHH
T ss_pred HHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcch-hHHHHHHH
Confidence 6444433 33378887665535568999999987665310 0 000000 12689999
Q ss_pred HhccccCeEEEEEEcCc---------hhhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEecCC
Q 004133 166 KRLLKSGGKFVCLTLAE---------SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 226 (772)
Q Consensus 166 ~rvLkpGG~~ii~~~~~---------~~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~~ 226 (772)
.+.|+|||++.++.-.. ..+++.++.. ++...+..++...=.....+..+.+++|.+.
T Consensus 382 l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~---~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 382 LYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQ---DLVECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHT---TCEEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred HHHhccCceEEEEecchhhhcCcchHHHHHHHHHhC---CcHhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 99999999988876321 1223333332 4555666665321123567888888888765
No 411
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.37 E-value=2e-06 Score=95.27 Aligned_cols=116 Identities=8% Similarity=0.107 Sum_probs=85.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++..+... +..+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~---------- 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK---------- 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh----------
Confidence 4578999999999999999886 44589999999999999999883321 23899999999999876431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-----CcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
...+||+|++|.-.- +. ..... .-.+++..+.+.|+|||++++...+.
T Consensus 286 -------------------~~~~fD~Vi~dpP~~----~~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 286 -------------------KGEKFDIVVLDPPAF----VQ--HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp -------------------TTCCEEEEEECCCCS----CS--SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred -------------------hCCCCCEEEECCCCC----CC--CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 135799999964211 00 01111 13568899999999999988776554
No 412
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.37 E-value=7.6e-07 Score=88.95 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=78.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|.|.++..+ +..++++||+++.+++.|++.+ ++++++.+|+.++ .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~------------ 90 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEAL----P------------ 90 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSC----C------------
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccC----C------------
Confidence 5679999999999987776 2238999999999999999987 5688888886542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChh
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 696 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 696 (772)
.....||+|++..- ...+. --..+|+.+++.|+|||.+++....+...
T Consensus 91 -----------------~~~~~fD~v~~~~~----l~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 91 -----------------FPGESFDVVLLFTT----LEFVE------DVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp -----------------SCSSCEEEEEEESC----TTTCS------CHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred -----------------CCCCcEEEEEEcCh----hhhcC------CHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 11367999997421 11111 12689999999999999999988776544
No 413
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.37 E-value=3.7e-07 Score=92.46 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCC-----CCCCeEEEEccHHHHHHhhcccCcc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT-----QDKSLKVHITDGIKFVREMKSSSAT 614 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~-----~~~rl~v~i~Dg~~~l~~~~~~~~~ 614 (772)
....+||.||+|.|.++..+.+.. +..+|++||+++.+++.|++.+.-. ..++++++.+|+......
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 148 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------- 148 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-------
Confidence 345799999999999999888875 5569999999999999999876210 135799999998632110
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 615 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
...||+|+++... .. +++.+.+.|+|||.+++.+.+..
T Consensus 149 --------------------------~~~fD~i~~~~~~-----------~~-----~~~~~~~~LkpgG~lv~~~~~~~ 186 (226)
T 1i1n_A 149 --------------------------EAPYDAIHVGAAA-----------PV-----VPQALIDQLKPGGRLILPVGPAG 186 (226)
T ss_dssp --------------------------GCCEEEEEECSBB-----------SS-----CCHHHHHTEEEEEEEEEEESCTT
T ss_pred --------------------------CCCcCEEEECCch-----------HH-----HHHHHHHhcCCCcEEEEEEecCC
Confidence 2469999985422 12 24688899999999999886543
No 414
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=2e-06 Score=87.98 Aligned_cols=112 Identities=13% Similarity=0.205 Sum_probs=82.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|....+ +|++||+++.+++.|++.+. ..+++++++|..+.-.....
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~---------- 119 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQI---------- 119 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHH----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc---ccCceEEECccccccccccc----------
Confidence 3457899999999999999999876 89999999999999999984 35899999998775332210
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
. ....||+|+...--.. + ++. --..+|+.+++.|+|||.+++.-+..
T Consensus 120 ~------------------~~~~~d~v~~~~~~~~----~--~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 120 H------------------SEIGDANIYMRTGFHH----I--PVE--KRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp H------------------HHHCSCEEEEESSSTT----S--CGG--GHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred c------------------cccCccEEEEcchhhc----C--CHH--HHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0 0134899998532211 1 111 12689999999999999866654443
No 415
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.37 E-value=6.1e-07 Score=90.05 Aligned_cols=104 Identities=16% Similarity=0.114 Sum_probs=77.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+.... |..+|++||+++.+++.|++.+.-..-++++++.+|+...+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------ 143 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP------------ 143 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG------------
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC------------
Confidence 345699999999999998888876 5579999999999999999886211114599999998432111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
...||+|+++..-. .+. +.+.+.|+|||.+++.+...
T Consensus 144 ---------------------~~~fD~v~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 ---------------------LAPYDRIYTTAAGP-----------KIP-----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ---------------------GCCEEEEEESSBBS-----------SCC-----HHHHHTEEEEEEEEEEESSS
T ss_pred ---------------------CCCeeEEEECCchH-----------HHH-----HHHHHHcCCCcEEEEEECCC
Confidence 24699999843211 111 48889999999999988654
No 416
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.37 E-value=2.4e-06 Score=87.72 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=91.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHH----HHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATD 615 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~----~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~ 615 (772)
....+||.||+|.|.++..+.... |..+|++||++|.++ +.|++. .++.++++|+...- ...
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------~nv~~i~~Da~~~~-~~~------ 141 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------PNIFPLLADARFPQ-SYK------ 141 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------TTEEEEECCTTCGG-GTT------
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------CCeEEEEcccccch-hhh------
Confidence 345789999999999999998875 567999999999774 455542 46899999986421 000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC-
Q 004133 616 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS- 694 (772)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~- 694 (772)
....+||+|++|+-..+ ....++..+++.|+|||.|++-+-.++
T Consensus 142 -----------------------~~~~~~D~I~~d~a~~~------------~~~il~~~~~~~LkpGG~lvisik~~~~ 186 (232)
T 3id6_C 142 -----------------------SVVENVDVLYVDIAQPD------------QTDIAIYNAKFFLKVNGDMLLVIKARSI 186 (232)
T ss_dssp -----------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred -----------------------ccccceEEEEecCCChh------------HHHHHHHHHHHhCCCCeEEEEEEccCCc
Confidence 01257999999863211 123345566779999999998764332
Q ss_pred ------hhHHHHHHHHHHHh-ccceEEEeec--CCceEEEEEec
Q 004133 695 ------QATKDMVISRMKMV-FNHLFCLQLE--EDVNLVLFGLS 729 (772)
Q Consensus 695 ------~~~~~~v~~~l~~v-F~~v~~~~~~--~~~N~vl~a~~ 729 (772)
.+..+.++..|++. |.-+-.+.++ +..+.+++|..
T Consensus 187 d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 187 DVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp ---CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 12234566777664 6655444442 33566666653
No 417
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.36 E-value=4.2e-07 Score=96.41 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=82.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC---CCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ---DKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~---~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
.+.+||.||+|.|.++..|... ..+|++||+++.+++.|++.+.-.. ..+++++.+|..++ .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~----~--------- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF----A--------- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----C---------
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----C---------
Confidence 3459999999999999988887 3689999999999999999874311 16799999997653 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc----HHHHHHHHHccCCCcEEEEEecCCC
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
....||+|++... ...+++ ..+|+.+++.|+|||.|++.+....
T Consensus 147 ---------------------~~~~fD~v~~~~~-----------~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 147 ---------------------LDKRFGTVVISSG-----------SINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ---------------------CSCCEEEEEECHH-----------HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ---------------------cCCCcCEEEECCc-----------ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 0367999986211 111222 7899999999999999999987664
Q ss_pred h
Q 004133 695 Q 695 (772)
Q Consensus 695 ~ 695 (772)
.
T Consensus 195 ~ 195 (299)
T 3g2m_A 195 A 195 (299)
T ss_dssp H
T ss_pred c
Confidence 3
No 418
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.36 E-value=9.1e-07 Score=97.41 Aligned_cols=102 Identities=12% Similarity=0.092 Sum_probs=83.0
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC---------------CCCCeEEEEccHHHHHHh
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVHITDGIKFVRE 607 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~---------------~~~rl~v~i~Dg~~~l~~ 607 (772)
..+||.+|.|.|.++..+....+..+|++||+|+..++.|++..... .-++++++.+|+.+++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 47899999999999999998877778999999999999999876221 112399999999999876
Q ss_pred hcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 608 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
.. .+||+|++|.+.. ..+|++.+.+.|+++|++.
T Consensus 128 ~~--------------------------------~~fD~I~lDP~~~--------------~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 128 RH--------------------------------RYFHFIDLDPFGS--------------PMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp ST--------------------------------TCEEEEEECCSSC--------------CHHHHHHHHHHEEEEEEEE
T ss_pred cc--------------------------------CCCCEEEeCCCCC--------------HHHHHHHHHHhcCCCCEEE
Confidence 42 4699999864311 1689999999999999988
Q ss_pred EEe
Q 004133 688 VNL 690 (772)
Q Consensus 688 ~Nl 690 (772)
+..
T Consensus 162 vt~ 164 (378)
T 2dul_A 162 VTA 164 (378)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 419
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.36 E-value=8.4e-07 Score=91.11 Aligned_cols=107 Identities=16% Similarity=0.119 Sum_probs=79.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|.... ..+|++||+++.+++.|++.+.- .++++++.+|..++ .
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG--MPVGKFILASMETA----T----------- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT--SSEEEEEESCGGGC----C-----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc--CCceEEEEccHHHC----C-----------
Confidence 456799999999999998888775 45799999999999999999853 26799999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++-- ....+ |+. --..+|+.+++.|+|||.+++-..
T Consensus 154 ------------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 154 ------------------LPPNTYDLIVIQW----TAIYL--TDA--DFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp ------------------CCSSCEEEEEEES----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------------CCCCCeEEEEEcc----hhhhC--CHH--HHHHHHHHHHHhcCCCeEEEEEec
Confidence 1135799999721 10001 000 126899999999999999998653
No 420
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.36 E-value=5.6e-07 Score=91.73 Aligned_cols=107 Identities=14% Similarity=0.171 Sum_probs=79.7
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
+.+||.||+|.|.++..|.. +..+|++||+++.+++.|++.+.-. ...+++++.+|+.++. .
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~------------ 129 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---P------------ 129 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC---C------------
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC---C------------
Confidence 35999999999999888865 4568999999999999999998531 2467999999986631 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
...||+|+.-..- ..+ |+. .-..+++.+++.|+|||.|++.....
T Consensus 130 -------------------~~~fD~v~~~~~l----~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 130 -------------------TELFDLIFDYVFF----CAI--EPE--MRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp -------------------SSCEEEEEEESST----TTS--CGG--GHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred -------------------CCCeeEEEEChhh----hcC--CHH--HHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 2479999972110 111 111 23689999999999999999866543
No 421
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.36 E-value=2.5e-06 Score=84.73 Aligned_cols=145 Identities=12% Similarity=0.092 Sum_probs=95.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHH-----HHhhcccCcccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF-----VREMKSSSATDE 616 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~-----l~~~~~~~~~~~ 616 (772)
...+||.||+|.|.++.++.+. ..+|++||++|.. ..++++++.+|..+. +.+.-.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~------ 85 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALR------ 85 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHH------
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhh------
Confidence 4578999999999999999887 5699999999851 235799999997542 111100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcC---CCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD---FVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~---f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....+||+|+.|.... ..|....... -+-...++.+.+.|+|||.|++-+...
T Consensus 86 ---------------------~~~~~~~D~Vlsd~~~~--~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 86 ---------------------EEGIEKVDDVVSDAMAK--VSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp ---------------------HHTCSSEEEEEECCCCC--CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---------------------cccCCcceEEecCCCcC--CCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 00013799999986322 1121100000 012467888999999999999988754
Q ss_pred ChhHHHHHHHHHHHhccceEEEeec----CCceEEEEEecC
Q 004133 694 SQATKDMVISRMKMVFNHLFCLQLE----EDVNLVLFGLSS 730 (772)
Q Consensus 694 ~~~~~~~v~~~l~~vF~~v~~~~~~----~~~N~vl~a~~~ 730 (772)
.. ...++..++..|..|...+.. +.....++|.+-
T Consensus 143 ~~--~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 143 DM--TNDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp TH--HHHHHHHHGGGEEEEEEECC------CCEEEEEEEEE
T ss_pred CC--HHHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeee
Confidence 43 356788899999998887642 223445666543
No 422
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.35 E-value=1.5e-06 Score=97.31 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=97.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.+|+|.|..+..+....++.+|+++|+++..++.+++.+ |+ +++++.+|+.++.....
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~~~~~~~--------- 312 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRYPSQWCG--------- 312 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTCTHHHHT---------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhhchhhcc---------
Confidence 456899999999999999999988789999999999999999886 44 37899999877643322
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC--------------CcHHHHHHHHHccCCCc
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQG 684 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f--------------~~~~fl~~~~~~L~~~G 684 (772)
+..||+|++|+-.+. .|+....+.. +...+|+.+.+.|+|||
T Consensus 313 ----------------------~~~fD~Vl~D~Pcsg--~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG 368 (429)
T 1sqg_A 313 ----------------------EQQFDRILLDAPCSA--TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 (429)
T ss_dssp ----------------------TCCEEEEEEECCCCC--GGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred ----------------------cCCCCEEEEeCCCCc--ccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 257999999874321 1221111111 12588999999999999
Q ss_pred EEEEEecCCChhHHHHHHHHHHHhccc
Q 004133 685 LFIVNLVSRSQATKDMVISRMKMVFNH 711 (772)
Q Consensus 685 ilv~Nl~~~~~~~~~~v~~~l~~vF~~ 711 (772)
.+++...+-.+...+.++..+-+.++.
T Consensus 369 ~lvystcs~~~~ene~~v~~~l~~~~~ 395 (429)
T 1sqg_A 369 TLVYATCSVLPEENSLQIKAFLQRTAD 395 (429)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTT
T ss_pred EEEEEECCCChhhHHHHHHHHHHhCCC
Confidence 999987666655555566655544443
No 423
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.34 E-value=8.5e-07 Score=91.44 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=98.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
+...+||.||+|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+.+.+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~~---------- 87 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIEK---------- 87 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG----------
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccCc----------
Confidence 3446899999999999999999988779999999999999999886 55 56899999999875322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhH
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 697 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 697 (772)
+..||+|++- ||- .-+-.++|....+.|+++|.||+.=....
T Consensus 88 -----------------------~~~~D~Ivia--------gmG----g~lI~~IL~~~~~~L~~~~~lIlq~~~~~--- 129 (244)
T 3gnl_A 88 -----------------------KDAIDTIVIA--------GMG----GTLIRTILEEGAAKLAGVTKLILQPNIAA--- 129 (244)
T ss_dssp -----------------------GGCCCEEEEE--------EEC----HHHHHHHHHHTGGGGTTCCEEEEEESSCH---
T ss_pred -----------------------cccccEEEEe--------CCc----hHHHHHHHHHHHHHhCCCCEEEEEcCCCh---
Confidence 1359999871 221 11337789999999999999998765432
Q ss_pred HHHHHHHHHHh-ccceEEEeecC--CceEEEEEecC
Q 004133 698 KDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLSS 730 (772)
Q Consensus 698 ~~~v~~~l~~v-F~~v~~~~~~~--~~N~vl~a~~~ 730 (772)
..+...|.+. |.-+-..-+.+ -.=+|+.+.+.
T Consensus 130 -~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 130 -WQLREWSEQNNWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp -HHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred -HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 3344455544 54222222222 23456666655
No 424
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.34 E-value=1.5e-06 Score=87.87 Aligned_cols=108 Identities=10% Similarity=0.158 Sum_probs=81.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-----CCCCeEEEEccHHHHHHhhcccCccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QDKSLKVHITDGIKFVREMKSSSATD 615 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-----~~~rl~v~i~Dg~~~l~~~~~~~~~~ 615 (772)
+...+||.||+|.|.++..+... ..+|++||+++.+++.|++.+.-. ...+++++.+|+.++ .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~----~------ 96 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL----S------ 96 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC----C------
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc----C------
Confidence 35679999999999999999887 469999999999999999987432 134689999987542 1
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc-H---HHHHHHHHccCCCcEEEEEec
Q 004133 616 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE-G---SFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~-~---~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++.. . -..+-+ . .+|+.+++.|+|||.+++...
T Consensus 97 -----------------------~~~~~~D~v~~~~--~---------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 97 -----------------------FHDSSFDFAVMQA--F---------LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp -----------------------SCTTCEEEEEEES--C---------GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------------CCCCceeEEEEcc--h---------hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 1136799999831 1 111112 2 799999999999999998766
Q ss_pred CCC
Q 004133 692 SRS 694 (772)
Q Consensus 692 ~~~ 694 (772)
.+.
T Consensus 143 ~~~ 145 (235)
T 3sm3_A 143 GQN 145 (235)
T ss_dssp BCC
T ss_pred Ccc
Confidence 553
No 425
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.34 E-value=2.6e-06 Score=94.38 Aligned_cols=120 Identities=13% Similarity=0.082 Sum_probs=86.6
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC--CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--DKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~--~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+||.+|+|.|.++..+.... ..+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~---------- 289 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD---------- 289 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh----------
Confidence 4689999999999999888863 4589999999999999999884322 23799999999999876431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCC-CCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSS-SGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~-~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
.+.+||+|++|.-....+ ..+ ....-.-.+++..+.+.|+|+|++++...+..
T Consensus 290 -------------------~~~~fD~Ii~dpP~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 290 -------------------RGEKFDVIVMDPPKFVENKSQL--MGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp -------------------TTCCEEEEEECCSSTTTCSSSS--SCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred -------------------cCCCCCEEEECCCCCCCChhHH--HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 125799999975221000 000 00001135789999999999999998665543
No 426
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.33 E-value=1.4e-06 Score=94.58 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=77.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
.+..+||.||+|.|.++.++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|+.++ .
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~----~-------- 126 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEV----H-------- 126 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS----C--------
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHh----c--------
Confidence 45679999999999999999987 445999999997 899999876 43 46899999998654 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
....+||+|+.+.-.. .+ ...-.-..+|..+.+.|+|||+++
T Consensus 127 ---------------------~~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 ---------------------LPVEKVDVIISEWMGY----FL---LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ---------------------CSCSCEEEEEECCCBT----TB---TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCCCcEEEEEEcCchh----hc---cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 1136799999853100 00 001112568999999999999998
No 427
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.33 E-value=1.3e-06 Score=86.08 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=76.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..+... ..++++||+++.+++.|++.+.-..-++++++.+|..++ .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL----T------------ 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC----C------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC----C------------
Confidence 4569999999999999999887 459999999999999999886321124699999997653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
. ...||+|+...--. .+ ++. --..+++.+++.|+|||.+++-
T Consensus 94 -----------------~-~~~~D~v~~~~~l~----~~--~~~--~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 94 -----------------F-DRQYDFILSTVVLM----FL--EAK--TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp -----------------C-CCCEEEEEEESCGG----GS--CGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----------------C-CCCceEEEEcchhh----hC--CHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 1 25799999742100 01 111 1277999999999999997653
No 428
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.33 E-value=3.1e-06 Score=91.19 Aligned_cols=103 Identities=16% Similarity=0.075 Sum_probs=79.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.||+|.|.++..+.+.+|..+++++|+ |.+++.|++++.- ...++++++.+|..+ ..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~------------ 232 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD---PL------------ 232 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS---CC------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC---CC------------
Confidence 457999999999999999999999999999999 9999999988721 124789999999752 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
...||+|++- .. --.+-+ ..+|+.+++.|+|||.+++.-.
T Consensus 233 --------------------p~~~D~v~~~----~v-------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 233 --------------------PAGAGGYVLS----AV-------LHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp --------------------CCSCSEEEEE----SC-------GGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred --------------------CCCCcEEEEe----hh-------hccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 1269999971 10 111222 5799999999999999987543
No 429
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.33 E-value=8.2e-07 Score=97.93 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=83.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhc--------CCCCCCCeEEEEccHHHHHHhhccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF--------GFTQDKSLKVHITDGIKFVREMKSS 611 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~F--------g~~~~~rl~v~i~Dg~~~l~~~~~~ 611 (772)
....+||.||+|.|.++..|...+ |..+|++||+++.+++.|++.+ |....++++++.+|..+......
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~-- 159 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP-- 159 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS--
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc--
Confidence 356799999999999999888876 6789999999999999999886 41234689999999865421100
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 612 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.......||+|+...--. .+ + . -..+|+.+++.|+|||.|++..+
T Consensus 160 -------------------------~~~~~~~fD~V~~~~~l~----~~---~-d--~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 160 -------------------------EGVPDSSVDIVISNCVCN----LS---T-N--KLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp -------------------------CCCCTTCEEEEEEESCGG----GC---S-C--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------------CCCCCCCEEEEEEccchh----cC---C-C--HHHHHHHHHHHcCCCCEEEEEEe
Confidence 001246799999843111 11 1 1 27899999999999999998643
No 430
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.32 E-value=6.1e-07 Score=91.56 Aligned_cols=107 Identities=19% Similarity=0.190 Sum_probs=76.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.||+|+|.++.+|...+ |..+|++||++|.+++.+.+.... .++++++.+|+.+...- .
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--~~~v~~~~~d~~~~~~~-~----------- 142 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--RTNIIPVIEDARHPHKY-R----------- 142 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--CTTEEEECSCTTCGGGG-G-----------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--cCCeEEEEcccCChhhh-c-----------
Confidence 45689999999999999999886 667999999998765544433321 15799999998764211 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
.....||+|++|....+ ....++..+.+.|+|||++++.+..
T Consensus 143 ------------------~~~~~~D~V~~~~~~~~------------~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 ------------------MLIAMVDVIFADVAQPD------------QTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ------------------GGCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ------------------ccCCcEEEEEEcCCCcc------------HHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 01257999999653111 1245688899999999999986543
No 431
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.32 E-value=3.5e-06 Score=83.41 Aligned_cols=164 Identities=13% Similarity=0.078 Sum_probs=92.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC--CCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP--FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p--~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
...+||.||+|.|.++..|...+| ..+|++||++|.. ..++++++.+|..+.....-... ..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~-----~~ 85 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNI-----NY 85 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccc-----cc
Confidence 346899999999999999999987 5799999999931 13568999998765310000000 00
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC----CcHHHHHHHHHccCCCcEEEEEecCCCh
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNLVSRSQ 695 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f----~~~~fl~~~~~~L~~~Gilv~Nl~~~~~ 695 (772)
+...... ........ ......||+|+.|..... .|...+ ... ....+++.+.+.|+|||.|++.++....
T Consensus 86 i~~~~~~-~~~~~~~~--~~~~~~fD~v~~~~~~~~--~g~~~~-d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 86 IDNMNNN-SVDYKLKE--ILQDKKIDIILSDAAVPC--IGNKID-DHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp ------C-HHHHHHHH--HHTTCCEEEEEECCCCCC--CSCHHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred cccccch-hhHHHHHh--hcCCCcccEEEeCCCcCC--CCCccc-CHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 0000000 00000000 001357999999652110 111000 000 0124788999999999999998765432
Q ss_pred hHHHHHHHHHHHhccceEEEeec----CCceEEEEEec
Q 004133 696 ATKDMVISRMKMVFNHLFCLQLE----EDVNLVLFGLS 729 (772)
Q Consensus 696 ~~~~~v~~~l~~vF~~v~~~~~~----~~~N~vl~a~~ 729 (772)
...+...++..|..+..++.. ......++|.+
T Consensus 160 --~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 160 --TNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp --HHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEE
T ss_pred --HHHHHHHHHHHHheEEEECCcccCCcCceEEEEEec
Confidence 345677788888877666532 22334555543
No 432
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.32 E-value=1.1e-06 Score=92.95 Aligned_cols=106 Identities=16% Similarity=0.236 Sum_probs=80.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|...++ .+|++||+++.+++.|++.+ |+ .++++++.+|..+. .
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 145 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEI----P-------- 145 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccC----C--------
Confidence 4567999999999999998888753 59999999999999999876 54 46899999997542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
..+..||+|++-- ....+ | . -..+|+.+++.|+|||.|++..+.
T Consensus 146 ---------------------~~~~~fD~v~~~~----~l~~~--~--~--~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 146 ---------------------CEDNSYDFIWSQD----AFLHS--P--D--KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp ---------------------SCTTCEEEEEEES----CGGGC--S--C--HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEecc----hhhhc--C--C--HHHHHHHHHHHcCCCeEEEEEEec
Confidence 1136799999731 10111 1 1 378999999999999999987543
No 433
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.32 E-value=3.1e-06 Score=82.24 Aligned_cols=136 Identities=11% Similarity=0.136 Sum_probs=88.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|+|.++..|.... +|++||+++.+++. .++++++.+|+.+.+.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~--------------- 75 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------HRGGNLVRADLLCSIN--------------- 75 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------CSSSCEEECSTTTTBC---------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------ccCCeEEECChhhhcc---------------
Confidence 45699999999999999998876 89999999999988 3578999999866311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC---cCCCcHHHHHHHHHccCCCcEEEEEecCCChhHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---ADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 698 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp---~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 698 (772)
..+||+|+.+.--. ....+. ..--..++++.+.+.| |||.+++-..... ..
T Consensus 76 -------------------~~~fD~i~~n~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~~ 129 (170)
T 3q87_B 76 -------------------QESVDVVVFNPPYV----PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--RP 129 (170)
T ss_dssp -------------------GGGCSEEEECCCCB----TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--CH
T ss_pred -------------------cCCCCEEEECCCCc----cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--CH
Confidence 25799999842110 000000 0011256888888888 9999998664332 22
Q ss_pred HHHHHHHHHh-ccceEEEeecCCceEEEEEecC
Q 004133 699 DMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSS 730 (772)
Q Consensus 699 ~~v~~~l~~v-F~~v~~~~~~~~~N~vl~a~~~ 730 (772)
+.+.+.+++. |..+...........++.....
T Consensus 130 ~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~ 162 (170)
T 3q87_B 130 KEVLARLEERGYGTRILKVRKILGETVYIIKGE 162 (170)
T ss_dssp HHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEE
T ss_pred HHHHHHHHHCCCcEEEEEeeccCCceEEEEEEe
Confidence 3445555554 6554444444444444444433
No 434
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.32 E-value=1.2e-06 Score=96.24 Aligned_cols=101 Identities=19% Similarity=0.247 Sum_probs=76.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
+.+.||.||+|+|.|++++++... .+|.+||.++ +++.|++.. |+ .++++++.+|..++ .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~----~--------- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETV----E--------- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTC----C---------
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeee----c---------
Confidence 346899999999999999988743 4899999997 788898775 54 57899999987554 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
-..++|+|+......- ...+-.-..++....+.|+|||+++
T Consensus 146 ---------------------lpe~~DvivsE~~~~~-------l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 ---------------------LPEQVDAIVSEWMGYG-------LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ---------------------CSSCEEEEECCCCBTT-------BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCccccEEEeeccccc-------ccccchhhhHHHHHHhhCCCCceEC
Confidence 1367999998553221 1122234778888889999999988
No 435
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.32 E-value=1e-06 Score=92.93 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=61.8
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCC---eEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccC
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFH---GITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~---~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~ 127 (772)
..+...+...+.. .++.+|||+|||+|.++..|++.+.. +|+++|+++.|++.++++. ..+++++++|+.+
T Consensus 28 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 28 HGVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhc
Confidence 3455556666654 57889999999999999999988542 2999999999999998873 4579999999999
Q ss_pred cccccC
Q 004133 128 MQVFMD 133 (772)
Q Consensus 128 l~~~~~ 133 (772)
++ +++
T Consensus 102 ~~-~~~ 106 (279)
T 3uzu_A 102 FD-FGS 106 (279)
T ss_dssp CC-GGG
T ss_pred CC-hhH
Confidence 87 543
No 436
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.32 E-value=9.2e-07 Score=94.34 Aligned_cols=90 Identities=14% Similarity=0.076 Sum_probs=70.5
Q ss_pred hhHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc
Q 004133 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (772)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g-~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~ 129 (772)
+.+...+..++.. .++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++....+.+++|+++|+.+++
T Consensus 12 pvLl~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 12 PVMVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp CTTHHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 3455556667754 578899999999999999999873 357999999999999999887654468999999998875
Q ss_pred c-cc---CCCccEEEecc
Q 004133 130 V-FM---DETFDVILDKG 143 (772)
Q Consensus 130 ~-~~---~~sfDvVi~~~ 143 (772)
. +. .++||.|+...
T Consensus 89 ~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHTTCSCEEEEEEEC
T ss_pred HHHHhcCCCCCCEEEEcC
Confidence 1 11 15799888643
No 437
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.32 E-value=1.5e-06 Score=91.57 Aligned_cols=117 Identities=12% Similarity=0.109 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CC-CCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GF-TQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
..+.+||.||+|.|.++..|.... .+|++||+++.+++.|++.. +. ....++.++.+|..++-...-
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------- 126 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP------- 126 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC-------
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc-------
Confidence 345799999999999999988873 49999999999999998764 11 122578899999887643321
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc-CCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA-DFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~-~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
....||+|++-.+.- ..+..+.. .=.-..+|+.+.+.|+|||+|++....
T Consensus 127 -----------------------~~~~fD~V~~~g~~l---~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 127 -----------------------AGDGFDAVICLGNSF---AHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp -----------------------CTTCEEEEEECTTCG---GGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -----------------------cCCCeEEEEEcChHH---hhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 136799999821110 01100000 001377999999999999999988754
No 438
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.31 E-value=1.3e-06 Score=95.22 Aligned_cols=104 Identities=18% Similarity=0.219 Sum_probs=78.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|.|.++.++.+. +..+|++||+++ +++.|++.. |+ .++++++.+|..++ ..
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~---------- 129 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL--DHVVTIIKGKVEEV--EL---------- 129 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTC--CC----------
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC--CCcEEEEECcHHHc--cC----------
Confidence 4578999999999999999988 566999999995 999999876 44 46799999998665 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
...+||+|+.+.-... + ...-.-..++..+.+.|+|||+++.+
T Consensus 130 ---------------------~~~~fD~Iis~~~~~~----l---~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 ---------------------PVEKVDIIISEWMGYC----L---FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ---------------------SSSCEEEEEECCCBBT----B---TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ---------------------CCCceEEEEEcccccc----c---cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1367999998531110 0 11112367899999999999999743
No 439
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.31 E-value=8e-07 Score=90.30 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=77.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC------CCcEEEEEcCHHHHHHHHHhcCCCC-----CCCeEEEEccHHHHHHhhcc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMP------FVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKS 610 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p------~~~i~~VEiDp~v~~vA~~~Fg~~~-----~~rl~v~i~Dg~~~l~~~~~ 610 (772)
...+||.||+|.|.++..|.+..+ ..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.+..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP--- 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG---
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc---
Confidence 346899999999999998888654 2589999999999999998863111 25799999998752111
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 611 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|+++.... . +++.+.+.|+|||.+++.+
T Consensus 161 ------------------------------~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 ------------------------------NAPYNAIHVGAAAP-----------D-----TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp ------------------------------GCSEEEEEECSCBS-----------S-----CCHHHHHTEEEEEEEEEEE
T ss_pred ------------------------------CCCccEEEECCchH-----------H-----HHHHHHHHhcCCCEEEEEE
Confidence 14699999854221 1 2278899999999999998
Q ss_pred cC
Q 004133 691 VS 692 (772)
Q Consensus 691 ~~ 692 (772)
..
T Consensus 195 ~~ 196 (227)
T 1r18_A 195 GP 196 (227)
T ss_dssp SC
T ss_pred ec
Confidence 65
No 440
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.31 E-value=9.8e-07 Score=94.72 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=78.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+.+..+ ..+|++||+++.+++.|++.+....-++++++.+|+.+.+..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~------------ 141 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE------------ 141 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG------------
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc------------
Confidence 3457999999999999999988876 367999999999999999987211113599999998764221
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
...||+|+++.--. ++. +.+.+.|+|||++++.+.+
T Consensus 142 ---------------------~~~fD~Iv~~~~~~-----------~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 ---------------------FSPYDVIFVTVGVD-----------EVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ---------------------GCCEEEEEECSBBS-----------CCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred ---------------------CCCeEEEEEcCCHH-----------HHH-----HHHHHhcCCCcEEEEEECC
Confidence 24699999953211 111 5778899999999998754
No 441
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.31 E-value=1.4e-06 Score=92.95 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=81.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|...+ ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 180 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDT----P-------- 180 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcC----C--------
Confidence 456799999999999999998875 469999999999999999886 44 46899999998542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|+.-- . + ..+--..+|+.+.+.|+|||.+++-.+..
T Consensus 181 ---------------------~~~~~fD~V~~~~--~-----l----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 181 ---------------------FDKGAVTASWNNE--S-----T----MYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp ---------------------CCTTCEEEEEEES--C-----G----GGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEECC--c-----h----hhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 1136799999721 1 1 01115889999999999999999766443
No 442
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.30 E-value=2.1e-06 Score=92.62 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=76.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|.|.+++++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|+.++ .
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~----~--------- 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNGF--SDKITLLRGKLEDV----H--------- 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS----C---------
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCCEEEEECchhhc----c---------
Confidence 4578999999999999999987 455999999995 899999886 44 46899999997654 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
....+||+|+.+.-.. .+ ...-.-..++..+++.|+|||+++
T Consensus 101 --------------------~~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 --------------------LPFPKVDIIISEWMGY----FL---LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp --------------------CSSSCEEEEEECCCBT----TB---STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCCcccEEEEeCchh----hc---ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 0135799999853211 00 011122578999999999999998
No 443
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.30 E-value=1.2e-06 Score=95.32 Aligned_cols=103 Identities=21% Similarity=0.174 Sum_probs=76.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 618 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~ 618 (772)
...+||.||+|.|.++.++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|..++ .
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~----~--------- 112 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEV----S--------- 112 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTC----C---------
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhC----C---------
Confidence 4579999999999999999886 556999999997 789998876 44 46899999997653 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 619 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...+||+|+...-.. .+ ... .-.+++..+++.|+|||+++++.
T Consensus 113 ---------------------~~~~~D~Ivs~~~~~----~~--~~~--~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 ---------------------LPEQVDIIISEPMGY----ML--FNE--RMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ---------------------CSSCEEEEEECCCBT----TB--TTT--SHHHHHHHGGGGEEEEEEEESCE
T ss_pred ---------------------CCCceeEEEEeCchh----cC--ChH--HHHHHHHHHHhhcCCCeEEEEec
Confidence 024699999842110 00 011 12567788899999999998653
No 444
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.30 E-value=1e-05 Score=92.97 Aligned_cols=179 Identities=12% Similarity=0.033 Sum_probs=116.3
Q ss_pred ccccccchhhHHHHHHHhhcCCC-CCCCCeEEEEcCCCchhHHHHHHc----CCCeEEEEeCCHHHHHHHHHHhccCCC-
Q 004133 43 SFEWYAEWPQLRDPLISLIGAPT-SSPPPQILVPGCGNSRLSEHLYDA----GFHGITNVDFSKVVISDMLRRNVRDRS- 116 (772)
Q Consensus 43 ~~eW~~~~~~l~~~l~~~l~~~~-~~~~~~ILDlGCG~G~ls~~La~~----g~~~V~gvDiS~~~I~~a~~~~~~~~~- 116 (772)
.-++|.. ..+...+.+++.... ..++.+|||++||+|.+...+++. +...++|+|+++.++..|+.+..-++.
T Consensus 196 ~G~fyTP-~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 196 AGEFYTP-QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CSSCCCC-HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCeeccc-HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 3444444 567777777775211 146789999999999999887765 245799999999999999776544433
Q ss_pred --CcEEEEeeccCc--ccccCCCccEEEecccccccccCc-----c------c---h-H-HHHHHHHHHHhccc-cCeEE
Q 004133 117 --DMRWRVMDMTSM--QVFMDETFDVILDKGGLDALMEPE-----L------G---H-K-LGNQYLSEVKRLLK-SGGKF 175 (772)
Q Consensus 117 --~v~f~~~D~~~l--~~~~~~sfDvVi~~~~l~~l~~~~-----~------~---~-~-~~~~~l~ei~rvLk-pGG~~ 175 (772)
++.+.++|.... +......||+|+++-.+..-.... + + + . .--.+++.+.+.|+ +||++
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~ 354 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVM 354 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEE
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeE
Confidence 578999998876 324567899999886654211000 0 0 0 0 01258999999999 99999
Q ss_pred EEEEcCch--------hhhhcccccccCCcEEEEEEcCCCCCCCCCcceEEEEEEecC
Q 004133 176 VCLTLAES--------HVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 225 (772)
Q Consensus 176 ii~~~~~~--------~~~~~l~~~~~~~w~~~~~~~~~~~~~~~~l~~f~~~~~K~~ 225 (772)
.++....- .+++.++.. .+...+..++..-=.....+..+.+++|.+
T Consensus 355 a~VlP~g~Lf~~~~~~~iRk~Lle~---~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 355 AIVLPHGVLFRGNAEGTIRKALLEE---GAIDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp EEEEETHHHHCCTHHHHHHHHHHHT---TCEEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred EEEecchHhhCCchhHHHHHHHHhC---CceeEEEEccccccCCCCCcEEEEEEecCC
Confidence 88764321 122233332 455566666532112456778888888865
No 445
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.30 E-value=9.2e-07 Score=97.61 Aligned_cols=101 Identities=13% Similarity=0.038 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCchhHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhccCCC-C--cEEEEeeccCccc-ccCCCccEEEe
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRS-D--MRWRVMDMTSMQV-FMDETFDVILD 141 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~--g~~~V~gvDiS~~~I~~a~~~~~~~~~-~--v~f~~~D~~~l~~-~~~~sfDvVi~ 141 (772)
++.+|||++||+|.++..++.. |...|+++|+++.+++.++++....+. + ++++++|+.++.. ...+.||+|+.
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4689999999999999999885 546799999999999999888765553 3 8999999987531 11467999987
Q ss_pred cccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 142 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 142 ~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
.. . .. ...+++.+.+.|++||++++..
T Consensus 132 DP-~---g~-------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-F---GT-------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-S---SC-------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-C---cC-------HHHHHHHHHHHhCCCCEEEEEe
Confidence 54 1 11 1468889999999999766554
No 446
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.29 E-value=1.9e-06 Score=93.49 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=94.5
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
..+||.||+|.|.++..+....|..+|++||+++.+++.|++.+.. .+...+++.+|..++.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~-~~~~~~~~~~d~~~~~----------------- 258 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA-NGVEGEVFASNVFSEV----------------- 258 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH-TTCCCEEEECSTTTTC-----------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-hCCCCEEEEccccccc-----------------
Confidence 4689999999999999999998888999999999999999998732 1223677888876531
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHHH
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVI 702 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v~ 702 (772)
..+||+|+++. .-. .|+. ...-....+++.+++.|+|||.+++-.. +.... -
T Consensus 259 ------------------~~~fD~Iv~~~--~~~-~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~~----~ 310 (343)
T 2pjd_A 259 ------------------KGRFDMIISNP--PFH-DGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVAN-AFLPY----P 310 (343)
T ss_dssp ------------------CSCEEEEEECC--CCC-SSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEE-TTSSH----H
T ss_pred ------------------cCCeeEEEECC--Ccc-cCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEc-CCCCc----H
Confidence 25799999832 100 0100 0000136899999999999999987442 22221 2
Q ss_pred HHHHHhccceEEEeecCCceEEEEEec
Q 004133 703 SRMKMVFNHLFCLQLEEDVNLVLFGLS 729 (772)
Q Consensus 703 ~~l~~vF~~v~~~~~~~~~N~vl~a~~ 729 (772)
..+.+.|..+..+. .+..-.|+-+.+
T Consensus 311 ~~l~~~f~~~~~~~-~~~gf~v~~~~k 336 (343)
T 2pjd_A 311 DVLDETFGFHEVIA-QTGRFKVYRAIM 336 (343)
T ss_dssp HHHHHHHSCCEEEE-ECSSEEEEEEEC
T ss_pred HHHHHhcCceEEEe-eCCCEEEEEEEe
Confidence 34566777665544 333445555544
No 447
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.29 E-value=2.3e-06 Score=94.39 Aligned_cols=142 Identities=18% Similarity=0.141 Sum_probs=96.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|.|.++..+... ..+|++||+|+.+++.|++.+... .-.++++.+|+.++...
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~-~~~v~~~~~D~~~~~~~-------------- 295 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN-ALKAQALHSDVDEALTE-------------- 295 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTTSCT--------------
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-CCCeEEEEcchhhcccc--------------
Confidence 4569999999999999988887 359999999999999999987421 12389999998765211
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 701 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 701 (772)
..+||+|+++.--. .+.. ...-....+++.+++.|+|||.+++-.. +... .
T Consensus 296 -------------------~~~fD~Ii~npp~~---~~~~--~~~~~~~~~l~~~~~~LkpGG~l~iv~n-~~l~----~ 346 (381)
T 3dmg_A 296 -------------------EARFDIIVTNPPFH---VGGA--VILDVAQAFVNVAAARLRPGGVFFLVSN-PFLK----Y 346 (381)
T ss_dssp -------------------TCCEEEEEECCCCC---TTCS--SCCHHHHHHHHHHHHHEEEEEEEEEEEC-TTSC----H
T ss_pred -------------------CCCeEEEEECCchh---hccc--ccHHHHHHHHHHHHHhcCcCcEEEEEEc-CCCC----h
Confidence 25799999842111 0000 0011236899999999999999998653 3222 2
Q ss_pred HHHHHHhccceEEEeecCCceEEEEEecCC
Q 004133 702 ISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 731 (772)
Q Consensus 702 ~~~l~~vF~~v~~~~~~~~~N~vl~a~~~~ 731 (772)
-..+.+.|..+..+ .+..=.|+-+.+.+
T Consensus 347 ~~~l~~~f~~v~~l--~~~gF~Vl~a~~~~ 374 (381)
T 3dmg_A 347 EPLLEEKFGAFQTL--KVAEYKVLFAEKRG 374 (381)
T ss_dssp HHHHHHHHSCCEEE--EESSSEEEEEECC-
T ss_pred HHHHHHhhccEEEE--eCCCEEEEEEEEec
Confidence 34566778887776 33333455554443
No 448
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.29 E-value=1.1e-06 Score=89.78 Aligned_cols=104 Identities=17% Similarity=0.271 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+....+ .+|++||+++.+++.|++.+....-++++++.+|+.. ...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~----------- 154 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---GFP----------- 154 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CCG-----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc---CCC-----------
Confidence 3456899999999999999998877 7999999999999999998621111359999999821 111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
....||+|+++..- ..+ ...+.+.|+|||.+++.+....
T Consensus 155 -------------------~~~~fD~Ii~~~~~-----------~~~-----~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 155 -------------------PKAPYDVIIVTAGA-----------PKI-----PEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp -------------------GGCCEEEEEECSBB-----------SSC-----CHHHHHTEEEEEEEEEEECSSS
T ss_pred -------------------CCCCccEEEECCcH-----------HHH-----HHHHHHhcCCCcEEEEEEecCC
Confidence 02359999985321 112 1367889999999999886543
No 449
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.29 E-value=6e-07 Score=93.28 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||||||+|.++..++.. +...++++|++..+....+. ....+.++.+...++.... ++.+.||+|++..+.
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~~g~~ii~~~~~~dv~~-l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQSLGWNIITFKDKTDIHR-LEPVKCDTLLCDIGE 150 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCBTTGGGEEEECSCCTTT-SCCCCCSEEEECCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCcCCCCeEEEeccceehh-cCCCCccEEEecCcc
Confidence 57889999999999999988876 55678999998532100000 0001125566666665555 778899999997766
Q ss_pred cccccCccchHHHHHHHHHHHhccccC-eEEEEEEcC
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSG-GKFVCLTLA 181 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpG-G~~ii~~~~ 181 (772)
+ .-....+......+|+.+.++|+|| |.|++-.|.
T Consensus 151 n-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 151 S-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred C-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 5 1111101111224589999999999 999998877
No 450
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.29 E-value=8.1e-07 Score=90.50 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=78.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.||+|.|.++..+... .++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~------------ 92 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME-TNRHVDFWVQDMREL----E------------ 92 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH-TTCCCEEEECCGGGC----C------------
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh-cCCceEEEEcChhhc----C------------
Confidence 3479999999999998888776 5899999999999999998742 125789999997653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
. ...||+|++..+.-.. + +..---..+|+.+++.|+|||.+++.+..
T Consensus 93 -----------------~-~~~fD~v~~~~~~~~~---~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 93 -----------------L-PEPVDAITILCDSLNY---L---QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp -----------------C-SSCEEEEEECTTGGGG---C---CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------C-CCCcCEEEEeCCchhh---c---CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 0 2569999984211100 0 00001257899999999999999998754
No 451
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.28 E-value=2.8e-06 Score=89.85 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=76.3
Q ss_pred CCCeEEEEcccccHHHH----HHHHhCCCCcE--EEEEcCHHHHHHHHHhcCCC---CCCCeEEEEccHHHHHHhhcccC
Q 004133 542 KSVKAVVIGLGAGLLPM----FLHECMPFVGI--EAVELDLTMLNLAEDYFGFT---QDKSLKVHITDGIKFVREMKSSS 612 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~----~L~~~~p~~~i--~~VEiDp~v~~vA~~~Fg~~---~~~rl~v~i~Dg~~~l~~~~~~~ 612 (772)
.+.+||.||+|+|.++. .+...+|...| ++||+++.|++.|++.+.-. ..-++.+..+|+.++......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE-- 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT--
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc--
Confidence 45689999999996543 33444577755 99999999999999986311 122344556777666432110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 613 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
+..+.+||+|++-. ....+.. -..+|+.+++.|+|||.|++-..+
T Consensus 130 -------------------------~~~~~~fD~V~~~~----~l~~~~d------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 130 -------------------------KKELQKWDFIHMIQ----MLYYVKD------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp -------------------------TTCCCCEEEEEEES----CGGGCSC------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -------------------------ccCCCceeEEEEee----eeeecCC------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 01136799999721 1111111 167999999999999999987655
Q ss_pred CCh
Q 004133 693 RSQ 695 (772)
Q Consensus 693 ~~~ 695 (772)
.+.
T Consensus 175 ~~~ 177 (292)
T 2aot_A 175 GSS 177 (292)
T ss_dssp TTS
T ss_pred CCc
Confidence 543
No 452
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.28 E-value=1.3e-06 Score=86.64 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=77.6
Q ss_pred eEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccccc
Q 004133 545 KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNE 624 (772)
Q Consensus 545 ~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~ 624 (772)
+||.||+|.|.++..+... ..++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~--------------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQE-KGVKITTVQSNLADF----D--------------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHH-HTCCEEEECCBTTTB----S---------------
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEEcChhhc----C---------------
Confidence 9999999999999888876 35999999999999999988731 112688998887553 1
Q ss_pred cccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 625 ITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|++.. .. + ++. .-..+|+.+++.|+|||.+++.....
T Consensus 90 --------------~~~~~fD~v~~~~-~~-----~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 --------------IVADAWEGIVSIF-CH-----L--PSS--LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --------------CCTTTCSEEEEEC-CC-----C--CHH--HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --------------CCcCCccEEEEEh-hc-----C--CHH--HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 1135799999732 11 0 111 13679999999999999999987544
No 453
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.28 E-value=2.2e-06 Score=94.32 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=78.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++.++.+.. ..+|++||++ .+++.|++.+.. ...++++++.+|..++ .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---------- 125 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI----S---------- 125 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC----C----------
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc----C----------
Confidence 456789999999999999999883 3499999999 999999988721 1246799999998654 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~ 688 (772)
. ..+||+|+.+.-..- ....-.-..++..+.+.|+|||++++
T Consensus 126 -------------------~-~~~~D~Iv~~~~~~~-------l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 -------------------L-PEKVDVIISEWMGYF-------LLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp -------------------C-SSCEEEEEECCCBTT-------BTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred -------------------c-CCcceEEEEcChhhc-------ccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 0 257999999541110 01111236789999999999999984
No 454
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.27 E-value=5.2e-07 Score=91.70 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=73.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..|... ..+|++||+++.+++.|++. .++++++.+|+.+.+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-------------- 105 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP-------------- 105 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC--------------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC--------------
Confidence 34579999999999999999888 46999999999999999998 2478999999753211
Q ss_pred cccccccCCCCCCCCCCCCC-CCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 621 HGNEITSNNTRSCNGNCTAS-NARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~-~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
.. ...||+|+.. .+ + ..+|+.+.+.|+|||.++
T Consensus 106 ------------------~~~~~~fD~v~~~---~~-------~------~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 ------------------AGLGAPFGLIVSR---RG-------P------TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ------------------TTCCCCEEEEEEE---SC-------C------SGGGGGHHHHEEEEEEEE
T ss_pred ------------------CcCCCCEEEEEeC---CC-------H------HHHHHHHHHHcCCCcEEE
Confidence 11 3579999985 11 1 466889999999999998
No 455
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.27 E-value=1.4e-06 Score=89.53 Aligned_cols=108 Identities=15% Similarity=0.163 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..|... ..+|++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~----~----------- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE-RNLKIEFLQGDVLEI----A----------- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-TTCCCEEEESCGGGC----C-----------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEECChhhc----c-----------
Confidence 34579999999999999988886 35899999999999999988732 123689999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
...+||+|++...... .. ++. --..+|+.+++.|+|||++++.+.+
T Consensus 102 -------------------~~~~fD~v~~~~~~~~----~~-~~~--~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 102 -------------------FKNEFDAVTMFFSTIM----YF-DEE--DLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp -------------------CCSCEEEEEECSSGGG----GS-CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------------cCCCccEEEEcCCchh----cC-CHH--HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 0256999997321110 00 000 1267899999999999999988754
No 456
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.26 E-value=1.5e-06 Score=91.27 Aligned_cols=104 Identities=11% Similarity=0.075 Sum_probs=78.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..|... ..+|++||+++.+++.|++.+... .-+++++.+|+.++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~--------------- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE-NLNISTALYDINAANI--------------- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCGGGCCC---------------
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc-CCceEEEEeccccccc---------------
Confidence 5679999999999999999887 359999999999999999987421 1279999999865311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..+||+|++..-- .-+ +++ .-..+++.+++.|+|||++++-.
T Consensus 182 -------------------~~~fD~i~~~~~~----~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 182 -------------------QENYDFIVSTVVF----MFL--NRE--RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -------------------CSCEEEEEECSSG----GGS--CGG--GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------cCCccEEEEccch----hhC--CHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 3679999983210 000 111 12589999999999999977644
No 457
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.26 E-value=2.9e-06 Score=85.97 Aligned_cols=100 Identities=21% Similarity=0.331 Sum_probs=77.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||.||+|.|.++..+.... .+|++||+++.+++.|++.+.-.. +++++.+|+.+.+..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~------------- 131 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEE------------- 131 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGG-------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCccccccc-------------
Confidence 345689999999999999999886 689999999999999999985322 799999998662111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
...||+|+++..- .++. ..+.+.|+|||.+++.....
T Consensus 132 --------------------~~~fD~v~~~~~~-----------~~~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 --------------------EKPYDRVVVWATA-----------PTLL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp --------------------GCCEEEEEESSBB-----------SSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred --------------------CCCccEEEECCcH-----------HHHH-----HHHHHHcCCCcEEEEEEcCC
Confidence 2569999985311 1121 36888999999999987544
No 458
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.25 E-value=1.3e-06 Score=86.97 Aligned_cols=109 Identities=16% Similarity=0.107 Sum_probs=76.9
Q ss_pred CCCCeEEEEcccccHH-HHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLL-PMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l-~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|+|.+ ..++.. +..+|++||+++.+++.|++.+.- ...+++++.+|+.++ .
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~---------- 84 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRE-NNFKLNISKGDIRKL----P---------- 84 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHH-HTCCCCEEECCTTSC----C----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEECchhhC----C----------
Confidence 3457999999999976 344433 346999999999999999988632 124688999987542 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|++. .....+ |+. --..+++.+++.|+|||.+++...+.
T Consensus 85 -------------------~~~~~fD~v~~~----~~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 -------------------FKDESMSFVYSY----GTIFHM--RKN--DVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -------------------SCTTCEEEEEEC----SCGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -------------------CCCCceeEEEEc----ChHHhC--CHH--HHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 113679999972 110111 111 13678999999999999999987654
No 459
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.25 E-value=9.6e-06 Score=87.06 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=78.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+...+|..+++++|++ .+++.|++.+ |+ .++++++.+|..+. ..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~--------- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEV--DY--------- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTS--CC---------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccC--CC---------
Confidence 45679999999999999999999999999999999 9999999886 43 45799999987542 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC---cHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~---~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++-- . ...+- -..+|+.+++.|+|||.+++.-
T Consensus 230 -----------------------~~~~D~v~~~~--~---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 230 -----------------------GNDYDLVLLPN--F---------LHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp -----------------------CSCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------CCCCcEEEEcc--h---------hccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 13499999811 0 11111 2589999999999999776643
No 460
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.24 E-value=4.1e-06 Score=82.48 Aligned_cols=128 Identities=13% Similarity=0.145 Sum_probs=86.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC---------CcEEEEEcCHHHHHHHHHhcCCCCCCCeEEE-EccHHHHHH--hhc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPF---------VGIEAVELDLTMLNLAEDYFGFTQDKSLKVH-ITDGIKFVR--EMK 609 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~---------~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~-i~Dg~~~l~--~~~ 609 (772)
...+||+||+|.|.++..|...++. .+|++||+++.. . -++++++ .+|....-. ...
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~---~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P---LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C---CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c---CCCCeEEEeccCCCHHHHHHHH
Confidence 4578999999999999999998764 799999999941 1 2467888 888544311 100
Q ss_pred ccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc--------HHHHHHHHHccC
Q 004133 610 SSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE--------GSFLLTVKDALS 681 (772)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~--------~~fl~~~~~~L~ 681 (772)
. ...+..||+|+.|..... .+. ...+ ..+++.+.+.|+
T Consensus 91 ~---------------------------~~~~~~fD~V~~~~~~~~--~~~-----~~~~~~~~~~~~~~~l~~~~~~Lk 136 (196)
T 2nyu_A 91 E---------------------------VLPGRRADVILSDMAPNA--TGF-----RDLDHDRLISLCLTLLSVTPDILQ 136 (196)
T ss_dssp H---------------------------HSGGGCEEEEEECCCCCC--CSC-----HHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred H---------------------------hcCCCCCcEEEeCCCCCC--CCC-----cccCHHHHHHHHHHHHHHHHHHhc
Confidence 0 001246999999652110 010 1111 378999999999
Q ss_pred CCcEEEEEecCCChhHHHHHHHHHHHhccceEEEe
Q 004133 682 EQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQ 716 (772)
Q Consensus 682 ~~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~ 716 (772)
|||.|++..+... . ...+...++..|..+..++
T Consensus 137 pgG~lv~~~~~~~-~-~~~~~~~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 137 PGGTFLCKTWAGS-Q-SRRLQRRLTEEFQNVRIIK 169 (196)
T ss_dssp EEEEEEEEECCSG-G-GHHHHHHHHHHEEEEEEEC
T ss_pred CCCEEEEEecCCc-c-HHHHHHHHHHHhcceEEEC
Confidence 9999999876543 2 2456777888898877665
No 461
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.24 E-value=4.5e-07 Score=93.66 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=40.7
Q ss_pred CCCeEEEEcccccHHHHHHHHh--CCCCcEEEEEcCHHHHHHHHHhcC
Q 004133 542 KSVKAVVIGLGAGLLPMFLHEC--MPFVGIEAVELDLTMLNLAEDYFG 587 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~--~p~~~i~~VEiDp~v~~vA~~~Fg 587 (772)
.+.+||.+|+|+|.++..+... .+..+|++||+|+.+++.|++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 4578999999999999999887 566799999999999999997763
No 462
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.24 E-value=1.2e-05 Score=87.58 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+ ++ .+|++++.+|..+. .
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 253 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKE----S-------- 253 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTS----C--------
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccC----C--------
Confidence 4567999999999999999999999999999999 99999999886 44 46799999997653 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCC---cHHHHHHHHHccCCCcEEEEE
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~---~~~fl~~~~~~L~~~Gilv~N 689 (772)
-..+|+|++.-- -..+- -..+|+.+++.|+|||.+++.
T Consensus 254 -----------------------~~~~D~v~~~~v-----------lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 254 -----------------------YPEADAVLFCRI-----------LYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp -----------------------CCCCSEEEEESC-----------GGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred -----------------------CCCCCEEEEech-----------hccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 022499987210 01111 267899999999999998654
No 463
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.24 E-value=1.3e-06 Score=87.73 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=77.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..+... + .++++||+++.+++.|++.+. +++.+|..++...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~~------------- 88 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDMP------------- 88 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCCC-------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCCC-------------
Confidence 35679999999999999999888 5 799999999999999998762 6777876542100
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
.....||+|++.- ....+.. ...+|+.+++.|+|||.+++.+...
T Consensus 89 ------------------~~~~~fD~v~~~~----~l~~~~~------~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 89 ------------------YEEEQFDCVIFGD----VLEHLFD------PWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp ------------------SCTTCEEEEEEES----CGGGSSC------HHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred ------------------CCCCccCEEEECC----hhhhcCC------HHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 1136799999731 1111111 1689999999999999999987554
No 464
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.24 E-value=1.2e-06 Score=91.06 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+||+||+|+|.++..+...+|..+|++||+++.+++.|++.. +++.++.+|+.+. .
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRL----P----------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSC----S-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhC----C-----------
Confidence 3457899999999999999999887789999999999999999885 4578888887542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
.....||+|+.- +. ..+++.+.+.|+|||.+++......
T Consensus 144 ------------------~~~~~fD~v~~~-~~----------------~~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 144 ------------------FSDTSMDAIIRI-YA----------------PCKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp ------------------BCTTCEEEEEEE-SC----------------CCCHHHHHHHEEEEEEEEEEEECTT
T ss_pred ------------------CCCCceeEEEEe-CC----------------hhhHHHHHHhcCCCcEEEEEEcCHH
Confidence 013579999961 11 1248999999999999998776543
No 465
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.24 E-value=1.1e-06 Score=88.29 Aligned_cols=110 Identities=13% Similarity=0.023 Sum_probs=75.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHH----HHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNL----AEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~v----A~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.||+|.|.++..|...+|..+|++||+++.+++. |++......-++++++++|+.++ .
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l----~------- 94 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL----P------- 94 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC----C-------
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC----C-------
Confidence 34578999999999999999999998999999999998874 33322111235799999998652 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCC-CCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSS-SGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~-~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..... |.|++........ .-+. -...+|+.+++.|+|||.|++.+
T Consensus 95 ----------------------~~~~~-d~v~~~~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 ----------------------PLSGV-GELHVLMPWGSLLRGVLG------SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ----------------------SCCCE-EEEEEESCCHHHHHHHHT------SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------------CCCCC-CEEEEEccchhhhhhhhc------cHHHHHHHHHHHcCCCcEEEEEe
Confidence 01233 7666433111000 0000 01688999999999999999854
No 466
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.22 E-value=8.8e-07 Score=98.06 Aligned_cols=74 Identities=8% Similarity=-0.118 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCHHHHHHHHHHhccC--C-CCcEEEEeeccCc-ccccCCCccEEEec
Q 004133 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD--R-SDMRWRVMDMTSM-QVFMDETFDVILDK 142 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~~~I~~a~~~~~~~--~-~~v~f~~~D~~~l-~~~~~~sfDvVi~~ 142 (772)
++.+|||+|||+|..+..++..+. +|+++|+|+.+++.+++++... + .+++|+++|+.+. +.+++++||+|+..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 478999999999999999988765 7999999999999998887543 2 4799999999984 31234689999974
No 467
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.22 E-value=2e-06 Score=93.24 Aligned_cols=104 Identities=9% Similarity=0.049 Sum_probs=79.6
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC-CCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 543 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-FTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 543 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg-~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
..+||.||+|.|.+...+.+.+|..+++++|+ |.+++.|++++. ....+|++++.+|..+.-...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------------- 245 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------------- 245 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-------------
Confidence 68999999999999999999999999999999 899999998862 112468999999975431001
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEe
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++-- . -..+-+ ..+|+.+++.|+|||.+++.-
T Consensus 246 -------------------~~~~D~v~~~~----v-------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 246 -------------------GGAADVVMLND----C-------LHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp -------------------TCCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------CCCccEEEEec----c-------cccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 24599999811 0 111122 579999999999999888753
No 468
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.22 E-value=2.1e-06 Score=94.82 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=83.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHHhcCCCC-CCC-eEEEEccHHHHHH-hhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQ-DKS-LKVHITDGIKFVR-EMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~Fg~~~-~~r-l~v~i~Dg~~~l~-~~~~~~~~~~~ 617 (772)
...+||.++.|.|.++..+....++ .+|++||+||..++.+++...+.. +++ ++++.+|+.++++ ...
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~-------- 123 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWG-------- 123 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCS--------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhC--------
Confidence 3468999999999999988887654 589999999999999999873321 345 9999999999987 642
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
.+||+|++|.+.. + .+|+..+.+.|+++|++++-.
T Consensus 124 ------------------------~~fD~V~lDP~g~--------~------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 124 ------------------------FGFDYVDLDPFGT--------P------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ------------------------SCEEEEEECCSSC--------C------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------------CCCcEEEECCCcC--------H------HHHHHHHHHHhCCCCEEEEEe
Confidence 5699999976311 1 579999999999999988754
No 469
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.22 E-value=1.4e-06 Score=93.14 Aligned_cols=115 Identities=10% Similarity=0.187 Sum_probs=72.4
Q ss_pred CCCeEEEEcccccH-HHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcC-CCCCC-----CeEEEEccHHH--HHHhhcccC
Q 004133 542 KSVKAVVIGLGAGL-LPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-FTQDK-----SLKVHITDGIK--FVREMKSSS 612 (772)
Q Consensus 542 ~~~~vLviGlG~G~-l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg-~~~~~-----rl~v~i~Dg~~--~l~~~~~~~ 612 (772)
...+||.||+|+|. +..++.. +..+|++||+++.+++.|++... ..... +++++++|... +-.++..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-- 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-- 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT--
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc--
Confidence 45789999999995 4444443 23589999999999999998862 10010 25677777621 0011110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 613 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
.....+||+|++-. .- .....+.+. ..+|+.++++|+|||+|++....
T Consensus 124 -------------------------~~~~~~FD~V~~~~-~l----hy~~~~~~~--~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 -------------------------VFYFGKFNIIDWQF-AI----HYSFHPRHY--ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp -------------------------TCCSSCEEEEEEES-CG----GGTCSTTTH--HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------------------cccCCCeeEEEECc-hH----HHhCCHHHH--HHHHHHHHHHcCCCCEEEEEeCC
Confidence 00135799998621 10 001112222 78999999999999999987754
No 470
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.22 E-value=2.1e-06 Score=90.29 Aligned_cols=114 Identities=13% Similarity=0.055 Sum_probs=81.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.+...+... +..++++||+++.+++.|++.+.-. ...+++++.+|+.+. ...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~---------- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR--HMD---------- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS--CCC----------
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc--ccC----------
Confidence 45579999999999887777776 4559999999999999999987421 235799999997653 000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
....||+|++..--. .+..+.. --..+|+.+++.|+|||.+++.....
T Consensus 130 --------------------~~~~fD~v~~~~~l~----~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 130 --------------------LGKEFDVISSQFSFH----YAFSTSE--SLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp --------------------CSSCEEEEEEESCGG----GGGSSHH--HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred --------------------CCCCcCEEEECchhh----hhcCCHH--HHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 136799999852100 0000000 12679999999999999999987543
No 471
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.21 E-value=1.3e-05 Score=87.58 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=79.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
....+||.||+|.|.++..|...+|..+++++|+ |.+++.|++.+ |+ .++++++.+|..+ ...
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~~-------- 246 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK---PLP-------- 246 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS---CCS--------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC---cCC--------
Confidence 4567999999999999999999999999999999 99999999886 43 4589999999753 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEec
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
..||+|++.- . -..+-+ ..+|+.+++.|+|||.+++.-.
T Consensus 247 ------------------------~~~D~v~~~~--v---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 ------------------------VTADVVLLSF--V---------LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ------------------------CCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ------------------------CCCCEEEEec--c---------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2399999831 0 011222 3799999999999998887544
No 472
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.21 E-value=7.3e-07 Score=93.05 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCCchhHHHHHHcCCCeEEEEeCCH-------HHHHHHHHHhccCC--CCcEEEEeeccCc-ccccC--C
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK-------VVISDMLRRNVRDR--SDMRWRVMDMTSM-QVFMD--E 134 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~g~~~V~gvDiS~-------~~I~~a~~~~~~~~--~~v~f~~~D~~~l-~~~~~--~ 134 (772)
.++.+|||+|||+|.++..++..|. +|+++|+|+ .+++.++++....+ .+++|+++|+.++ +.+++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3568999999999999999999875 699999999 99988876543222 2499999999885 22444 7
Q ss_pred CccEEEecccccc
Q 004133 135 TFDVILDKGGLDA 147 (772)
Q Consensus 135 sfDvVi~~~~l~~ 147 (772)
+||+|+...++.+
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 8999998776654
No 473
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.21 E-value=6.2e-07 Score=94.50 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=79.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.+|+|.|.++..++.. +..+|++||+||..++.|++...+. -.++++++.+|+.+|..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~------------- 189 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------- 189 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------------
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-------------
Confidence 44578999999999888877776 4468999999999999999887322 25789999999987632
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||.||+|.- + ...+||..+.++|++||++.+..
T Consensus 190 ---------------------~~~~D~Vi~~~p-----------~---~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 190 ---------------------ENIADRILMGYV-----------V---RTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ---------------------CSCEEEEEECCC-----------S---SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ---------------------ccCCCEEEECCC-----------C---cHHHHHHHHHHHcCCCCEEEEEe
Confidence 256999998531 1 23578999999999999987643
No 474
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.20 E-value=1e-06 Score=89.66 Aligned_cols=108 Identities=22% Similarity=0.225 Sum_probs=79.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..+.... .++++||+++.+++.|++.+.-. ..+++++.+|..++ .
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~------------ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDISNL----N------------ 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCGGGC----C------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-CCCeEEEecccccC----C------------
Confidence 56799999999999988888773 58999999999999999987321 22789999987653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
. ...||+|++..+.- ..+ +..---..+|+.+++.|+|||.+++.+..
T Consensus 98 -----------------~-~~~fD~v~~~~~~l---~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 98 -----------------I-NRKFDLITCCLDST---NYI---IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp -----------------C-SCCEEEEEECTTGG---GGC---CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----------------c-cCCceEEEEcCccc---ccc---CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 0 15699999832110 001 00001267999999999999999997754
No 475
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.20 E-value=5.1e-06 Score=90.48 Aligned_cols=108 Identities=17% Similarity=0.161 Sum_probs=82.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 617 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~ 617 (772)
...++|.+|+|+|.++..+.... |..+|+++|+||.+++.|++.+ |+ + +++++.+|+.++...
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--~-~i~~~~~D~~~~~~~---------- 269 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--S-WIRFLRADARHLPRF---------- 269 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--T-TCEEEECCGGGGGGT----------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEeCChhhCccc----------
Confidence 45689999999999999999887 7789999999999999999886 54 2 799999998875221
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcC-CcCC--CcHHHHHHHHHccCCCcEEEEEe
Q 004133 618 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCP-AADF--VEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~P-p~~f--~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++|.--+ .... ...+ +-..+++.+++.|+|||.+++-.
T Consensus 270 -----------------------~~~~D~Ii~npPyg-----~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 270 -----------------------FPEVDRILANPPHG-----LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp -----------------------CCCCSEEEECCCSC-----C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred -----------------------cCCCCEEEECCCCc-----CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 23489999954211 1100 1111 12689999999999999999854
No 476
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.20 E-value=2e-06 Score=94.04 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=78.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
.+.+||.||+|.|.++..|.+.+|..+++++|+ |.+++.|++.+.-. ..+|++++.+|..+. +..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~----------- 244 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDR--DVP----------- 244 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSS--SCC-----------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccccc--CCC-----------
Confidence 567999999999999999999999999999999 99999999987421 246899999996431 000
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
. ...||+|++----. .+ |.+ --..+|+.+++.|+|||.+++.
T Consensus 245 ------------------~-p~~~D~v~~~~vlh----~~--~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 245 ------------------F-PTGFDAVWMSQFLD----CF--SEE--EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ------------------C-CCCCSEEEEESCST----TS--CHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred ------------------C-CCCcCEEEEechhh----hC--CHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 0 14699998721000 00 000 1146899999999999988774
No 477
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.19 E-value=1.6e-06 Score=90.10 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=64.7
Q ss_pred hHHHHHHHhhcCCCCCCCCeEEEEcCCCchhHHHHHHcCCCe--EEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcc
Q 004133 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG--ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (772)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~La~~g~~~--V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~ 129 (772)
.+...+.+.+.. .++.+|||+|||+|.++. +.. + .+ |+++|+++.|++.++++... .++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhcc-CCceEEEECchhhCC
Confidence 455556666654 577899999999999999 754 4 35 99999999999999876632 357999999999987
Q ss_pred cccC-----CCccEEEecccc
Q 004133 130 VFMD-----ETFDVILDKGGL 145 (772)
Q Consensus 130 ~~~~-----~sfDvVi~~~~l 145 (772)
+++ +..|.|+++...
T Consensus 81 -~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 81 -FGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp -HHHHHHHHTSCEEEEEECCT
T ss_pred -HHHhhcccCCceEEEECCCC
Confidence 543 234677766543
No 478
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.18 E-value=8.6e-06 Score=88.75 Aligned_cols=102 Identities=18% Similarity=0.236 Sum_probs=77.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
....+|+.||+|.|.+...|.+.+|+.++++.|+ |.|++.|+++......+|++++.+|..+ . .
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~---~-~----------- 241 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFK---D-P----------- 241 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTT---S-C-----------
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcccc---C-C-----------
Confidence 3456899999999999999999999999999998 8999999999866567899999999632 1 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEE
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~N 689 (772)
...+|+|++ ... + -.+-+ ..+|+++++.|+|||.+++.
T Consensus 242 --------------------~~~~D~~~~----~~v---l----h~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 242 --------------------LPEADLYIL----ARV---L----HDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp --------------------CCCCSEEEE----ESS---G----GGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred --------------------CCCceEEEe----eee---c----ccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 245799987 110 0 11112 46799999999999976654
No 479
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.18 E-value=4.8e-06 Score=89.60 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=77.8
Q ss_pred CeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004133 544 VKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 622 (772)
Q Consensus 544 ~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 622 (772)
.+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+.-. ..++++++.+|..+ ..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~-------------- 230 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ---EV-------------- 230 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT---CC--------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC---CC--------------
Confidence 7999999999999999999999999999999 99999999886210 14689999998754 11
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 623 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++----. .+ +++ .-..+|+.+++.|+|||.+++.-
T Consensus 231 ------------------~~~~D~v~~~~vl~----~~--~~~--~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 231 ------------------PSNGDIYLLSRIIG----DL--DEA--ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp ------------------CSSCSEEEEESCGG----GC--CHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ------------------CCCCCEEEEchhcc----CC--CHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 14699999721100 00 000 11489999999999999888763
No 480
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.17 E-value=4.8e-06 Score=92.95 Aligned_cols=105 Identities=11% Similarity=0.043 Sum_probs=77.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHH-------HHhc---CCCCCCCeEEEEccHHH---HHHh
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLA-------EDYF---GFTQDKSLKVHITDGIK---FVRE 607 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA-------~~~F---g~~~~~rl~v~i~Dg~~---~l~~ 607 (772)
....+||.||+|.|.++..+....+..+|++||+++.+++.| ++.+ |+. -.+++++.+|+.. .+..
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCcccccccccc
Confidence 455789999999999999999987777899999999999999 7664 531 2579999987652 1221
Q ss_pred hcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEE
Q 004133 608 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 687 (772)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv 687 (772)
. ...||+|++...- + .+. -..+|..+.+.|+|||.++
T Consensus 320 ~--------------------------------~~~FDvIvvn~~l------~---~~d--~~~~L~el~r~LKpGG~lV 356 (433)
T 1u2z_A 320 L--------------------------------IPQCDVILVNNFL------F---DED--LNKKVEKILQTAKVGCKII 356 (433)
T ss_dssp H--------------------------------GGGCSEEEECCTT------C---CHH--HHHHHHHHHTTCCTTCEEE
T ss_pred c--------------------------------cCCCCEEEEeCcc------c---ccc--HHHHHHHHHHhCCCCeEEE
Confidence 1 1469999973110 0 011 1467889999999999998
Q ss_pred EE
Q 004133 688 VN 689 (772)
Q Consensus 688 ~N 689 (772)
+-
T Consensus 357 i~ 358 (433)
T 1u2z_A 357 SL 358 (433)
T ss_dssp ES
T ss_pred Ee
Confidence 74
No 481
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.16 E-value=2.5e-05 Score=77.67 Aligned_cols=116 Identities=19% Similarity=0.240 Sum_probs=81.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.+|+|.|.++..+.... ..+|++||+|+.+++.|++.+....- +++++.+|+.++ .
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~----~------------ 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF----N------------ 110 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC----C------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc----C------------
Confidence 45789999999999999988873 34899999999999999998743211 799999998763 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHHH
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 701 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 701 (772)
..||+|++|.--... ..-....+++.+.+.| +|++++.+. .....+.+
T Consensus 111 --------------------~~~D~v~~~~p~~~~--------~~~~~~~~l~~~~~~l--~~~~~~~~~--~~~~~~~~ 158 (207)
T 1wy7_A 111 --------------------SRVDIVIMNPPFGSQ--------RKHADRPFLLKAFEIS--DVVYSIHLA--KPEVRRFI 158 (207)
T ss_dssp --------------------CCCSEEEECCCCSSS--------STTTTHHHHHHHHHHC--SEEEEEEEC--CHHHHHHH
T ss_pred --------------------CCCCEEEEcCCCccc--------cCCchHHHHHHHHHhc--CcEEEEEeC--CcCCHHHH
Confidence 369999986421110 1123478899999988 777766532 23333444
Q ss_pred HHHHHH
Q 004133 702 ISRMKM 707 (772)
Q Consensus 702 ~~~l~~ 707 (772)
...+.+
T Consensus 159 ~~~l~~ 164 (207)
T 1wy7_A 159 EKFSWE 164 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444544
No 482
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.15 E-value=6.9e-06 Score=90.41 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=77.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHH----------hcCCCCCCCeEEEEccHHHHHHhhcc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAED----------YFGFTQDKSLKVHITDGIKFVREMKS 610 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~----------~Fg~~~~~rl~v~i~Dg~~~l~~~~~ 610 (772)
....+||.||+|.|.++..++...+..+|++||++|.++++|++ .+|+. .++++++.+|..+.--...
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d~- 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRER- 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHHH-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCccccc-
Confidence 45578999999999999999888776579999999999999986 34652 3589999999876421110
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 611 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
-..+|+|++. +. . + .+. -...|..+.+.|+|||.||+.
T Consensus 250 ------------------------------~~~aDVVf~N--n~-~---F---~pd--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 ------------------------------IANTSVIFVN--NF-A---F---GPE--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ------------------------------HHTCSEEEEC--CT-T---C---CHH--HHHHHHHHHTTSCTTCEEEES
T ss_pred ------------------------------cCCccEEEEc--cc-c---c---Cch--HHHHHHHHHHcCCCCcEEEEe
Confidence 0358999972 11 0 0 011 245677888999999999974
No 483
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.15 E-value=1.2e-06 Score=96.23 Aligned_cols=100 Identities=16% Similarity=0.210 Sum_probs=74.3
Q ss_pred CCCCeEEEEccc-------ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHH--HHHhhccc
Q 004133 541 GKSVKAVVIGLG-------AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIK--FVREMKSS 611 (772)
Q Consensus 541 ~~~~~vLviGlG-------~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~--~l~~~~~~ 611 (772)
.++.+||.||+| +|....++...+|..+|++||++|.+. + ..++++++++|+.+ |......
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---~~~rI~fv~GDa~dlpf~~~l~~- 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---DELRIRTIQGDQNDAEFLDRIAR- 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---CBTTEEEEECCTTCHHHHHHHHH-
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---cCCCcEEEEecccccchhhhhhc-
Confidence 456899999999 676667777778999999999999972 1 35789999999865 4433220
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEE
Q 004133 612 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 689 (772)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~N 689 (772)
....||+|+.|.. . . + . -...+|+.+.+.|+|||+|++.
T Consensus 285 ----------------------------~d~sFDlVisdgs-H-~---~----~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 285 ----------------------------RYGPFDIVIDDGS-H-I---N----A--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp ----------------------------HHCCEEEEEECSC-C-C---H----H--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------------------ccCCccEEEECCc-c-c---c----h--hHHHHHHHHHHhcCCCeEEEEE
Confidence 0156999998541 1 0 0 1 1267899999999999999985
No 484
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.15 E-value=1.8e-05 Score=83.65 Aligned_cols=109 Identities=22% Similarity=0.290 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhc------cCCCCcEEEEeeccCcccccCCCccEEE
Q 004133 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV------RDRSDMRWRVMDMTSMQVFMDETFDVIL 140 (772)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~------~~~~~v~f~~~D~~~l~~~~~~sfDvVi 140 (772)
...+||-+|.|.|..+.++.+. +..+|+.+||++.+++.+++-+. -..++++++.+|+...-.-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 4679999999999999999987 56789999999999999976542 2357899999999885424567999998
Q ss_pred ecccccccccCccchHHHHHHHHHHHhccccCeEEEEEE
Q 004133 141 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 179 (772)
Q Consensus 141 ~~~~l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~ 179 (772)
...+ +-...+. .-.-..+++.+++.|+|||++++-.
T Consensus 163 ~D~~-dp~~~~~--~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 163 SDCT-DPIGPGE--SLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ESCC-CCCCTTC--CSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EeCC-CcCCCch--hhcCHHHHHHHHHHhCCCCEEEEec
Confidence 5432 1110000 0002479999999999999999754
No 485
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.14 E-value=1.5e-06 Score=85.88 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=73.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
+.+.+||.||+|.|.++..+....|.++++++|+|+.++++|++.+... ...++++ .|...- ..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~---------- 112 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VY---------- 112 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HT----------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CC----------
Confidence 5678999999999999999999999999999999999999999998321 1224555 565443 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcH--HHHHHHHHccCCCcEEE
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG--SFLLTVKDALSEQGLFI 687 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~--~fl~~~~~~L~~~Gilv 687 (772)
...||+|+. .+- -++++. ..+..+.+.|+|+|+||
T Consensus 113 ---------------------~~~~DvVLa--~k~----------LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 113 ---------------------KGTYDVVFL--LKM----------LPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp ---------------------TSEEEEEEE--ETC----------HHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred ---------------------CCCcChhhH--hhH----------HHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 367999987 221 112211 23558999999999887
No 486
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.14 E-value=5e-07 Score=92.44 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=76.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.||+|.|.++..+.... .+|++||+++.+++.|++.+.... .++++++.+|+.++. .
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~----------- 141 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---S----------- 141 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---G-----------
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---c-----------
Confidence 56799999999999999998874 699999999999999998873211 358999999999874 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEe
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 690 (772)
...||+|++|.- ..+...+. ..+..+++.|+|||++++..
T Consensus 142 --------------------~~~~D~v~~~~~----~~~~~~~~------~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 --------------------FLKADVVFLSPP----WGGPDYAT------AETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp --------------------GCCCSEEEECCC----CSSGGGGG------SSSBCTTTSCSSCHHHHHHH
T ss_pred --------------------cCCCCEEEECCC----cCCcchhh------hHHHHHHhhcCCcceeHHHH
Confidence 256999998531 11111111 14456788899999877543
No 487
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.14 E-value=1.9e-06 Score=89.43 Aligned_cols=99 Identities=15% Similarity=0.068 Sum_probs=74.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
..+.+||.||+|.|.++..+.. +..+|++||++|.+++.|++.. +++++++|+.++ .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~----~----------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENL----A----------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSC----C-----------
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhC----C-----------
Confidence 4568999999999999999987 5679999999999999987765 789999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEec
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 691 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 691 (772)
.....||+|++-.-- ..+. --..+|+.+.+.|+ ||.+++-.+
T Consensus 90 ------------------~~~~~fD~v~~~~~l----~~~~------~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 90 ------------------LPDKSVDGVISILAI----HHFS------HLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp ------------------SCTTCBSEEEEESCG----GGCS------SHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred ------------------CCCCCEeEEEEcchH----hhcc------CHHHHHHHHHHHhC-CcEEEEEEc
Confidence 113679999983211 1111 12689999999999 995555443
No 488
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.13 E-value=2.4e-06 Score=92.62 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=85.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCC-CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 620 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~-~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~ 620 (772)
...+||.+|+|.|.++.. .. +..+|++||++|.+++.|++.+.... +++++++.+|+.+++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------------- 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------------- 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------
Confidence 457899999999999888 55 45699999999999999999873321 357999999998764
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCChhHHHH
Q 004133 621 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 700 (772)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 700 (772)
.+||+|++|. |. ...+++..+.+.|+|||++++...+.. .+.
T Consensus 257 ---------------------~~fD~Vi~dp------------P~--~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~ 298 (336)
T 2yx1_A 257 ---------------------VKGNRVIMNL------------PK--FAHKFIDKALDIVEEGGVIHYYTIGKD---FDK 298 (336)
T ss_dssp ---------------------CCEEEEEECC------------TT--TGGGGHHHHHHHEEEEEEEEEEEEESS---SHH
T ss_pred ---------------------CCCcEEEECC------------cH--hHHHHHHHHHHHcCCCCEEEEEEeecC---chH
Confidence 2499999953 11 113899999999999999988765555 344
Q ss_pred HHHHHHHhc
Q 004133 701 VISRMKMVF 709 (772)
Q Consensus 701 v~~~l~~vF 709 (772)
+.+.+++.+
T Consensus 299 ~~~~l~~~~ 307 (336)
T 2yx1_A 299 AIKLFEKKC 307 (336)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 566666664
No 489
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.12 E-value=6.3e-05 Score=79.74 Aligned_cols=148 Identities=19% Similarity=0.228 Sum_probs=97.4
Q ss_pred cCCCCeEEEEcccccHHH----HHHHHhCCCCcEEEEEcCHH-----------HHHHHHHhc----CCCCCC--CeEEEE
Q 004133 540 VGKSVKAVVIGLGAGLLP----MFLHECMPFVGIEAVELDLT-----------MLNLAEDYF----GFTQDK--SLKVHI 598 (772)
Q Consensus 540 ~~~~~~vLviGlG~G~l~----~~L~~~~p~~~i~~VEiDp~-----------v~~vA~~~F----g~~~~~--rl~v~i 598 (772)
.....+||.+|.|+|.-. ..+.+..|..+++.|.++.. ..++++..+ .+ ++. .+++++
T Consensus 94 ~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~-~~~~v~L~l~~ 172 (308)
T 3vyw_A 94 ERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY-EGERLSLKVLL 172 (308)
T ss_dssp HCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE-ECSSEEEEEEE
T ss_pred CCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc-cCCcEEEEEEe
Confidence 355678999999999422 12345567766655544321 122222221 11 123 567899
Q ss_pred ccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHH
Q 004133 599 TDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD 678 (772)
Q Consensus 599 ~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~ 678 (772)
||+.+.+.+.. +.++|+|++|.|++.. .|++.+.++|+.+.+
T Consensus 173 GDa~~~l~~l~-------------------------------~~~~Da~flDgFsP~k-------NPeLWs~e~f~~l~~ 214 (308)
T 3vyw_A 173 GDARKRIKEVE-------------------------------NFKADAVFHDAFSPYK-------NPELWTLDFLSLIKE 214 (308)
T ss_dssp SCHHHHGGGCC-------------------------------SCCEEEEEECCSCTTT-------SGGGGSHHHHHHHHT
T ss_pred chHHHHHhhhc-------------------------------ccceeEEEeCCCCccc-------CcccCCHHHHHHHHH
Confidence 99999988864 2479999999999853 678999999999999
Q ss_pred ccCCCcEEEEEecCCChhHHHHHHHHHHHhccceEEEeecCCceEEEEEecCCC
Q 004133 679 ALSEQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSES 732 (772)
Q Consensus 679 ~L~~~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~vl~a~~~~~ 732 (772)
+++|||+|+ .++..... -..|+++==.|...+-...--+.++|+....
T Consensus 215 ~~~pgg~la--TYtaag~V----RR~L~~aGF~V~k~~G~g~KReml~A~~~~~ 262 (308)
T 3vyw_A 215 RIDEKGYWV--SYSSSLSV----RKSLLTLGFKVGSSREIGRKRKGTVASLKAP 262 (308)
T ss_dssp TEEEEEEEE--ESCCCHHH----HHHHHHTTCEEEEEECC---CEEEEEESSSC
T ss_pred HhCCCcEEE--EEeCcHHH----HHHHHHCCCEEEecCCCCCCCceeEEecCCC
Confidence 999999998 45555543 3456666445666664344456788876543
No 490
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.12 E-value=7.6e-06 Score=89.01 Aligned_cols=103 Identities=16% Similarity=0.232 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 619 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~-~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~ 619 (772)
....+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+.- ...++++++.+|..+ ...
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~---------- 247 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLP---------- 247 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCS----------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCC----------
Confidence 4567999999999999999999999999999999 9999999988621 124589999999753 111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCc---HHHHHHHHHccCCCcEEEEEe
Q 004133 620 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 690 (772)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 690 (772)
..||+|++.-- -.++-+ ..+|+.+++.|+|||.+++.-
T Consensus 248 ----------------------~~~D~v~~~~v-----------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 248 ----------------------RKADAIILSFV-----------LLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ----------------------SCEEEEEEESC-----------GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------------CCccEEEEccc-----------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 24999987210 011222 379999999999999888654
No 491
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.12 E-value=1.5e-06 Score=90.38 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCCchhHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccCCCccEEEecccc
Q 004133 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMDETFDVILDKGGL 145 (772)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~La~~-g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~~sfDvVi~~~~l 145 (772)
.++.+|||||||+|.++...+.. +...|+|+|++..+...+.. ......++.+...++.... ++.+.+|+|++..+.
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~-l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFN-MEVIPGDTLLCDIGE 166 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGG-SCCCCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhh-cCCCCcCEEEecCcc
Confidence 57889999999999999988864 66679999998753211110 0011223444443333333 567899999998777
Q ss_pred cccccCccchHHHHHHHHHHHhccccC--eEEEEEEcC--chhh
Q 004133 146 DALMEPELGHKLGNQYLSEVKRLLKSG--GKFVCLTLA--ESHV 185 (772)
Q Consensus 146 ~~l~~~~~~~~~~~~~l~ei~rvLkpG--G~~ii~~~~--~~~~ 185 (772)
+ .-....+......+|+-+.++|+|| |.|++-.|. .+.+
T Consensus 167 n-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~ 209 (282)
T 3gcz_A 167 S-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLI 209 (282)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHH
T ss_pred C-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccH
Confidence 6 2111111111234588889999999 999998888 4443
No 492
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.12 E-value=9.2e-06 Score=84.15 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=76.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
.+.+||.||+|.|.++..|... ..++++||+++.+++.|++... . .++.+|+.++ .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~--~~~~~d~~~~----~------------ 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----K--NVVEAKAEDL----P------------ 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----S--CEEECCTTSC----C------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----C--CEEECcHHHC----C------------
Confidence 5679999999999999988876 3589999999999999999865 1 2777776542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecCCC
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 694 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 694 (772)
.....||+|++...-- ..+ +. -..+|+.+++.|+|||.+++.+.++.
T Consensus 110 -----------------~~~~~fD~v~~~~~~~------~~~-~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 110 -----------------FPSGAFEAVLALGDVL------SYV-EN--KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp -----------------SCTTCEEEEEECSSHH------HHC-SC--HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred -----------------CCCCCEEEEEEcchhh------hcc-cc--HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 1136799999721000 000 11 47899999999999999999876653
No 493
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.11 E-value=1.9e-05 Score=78.26 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=70.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 621 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 621 (772)
...+||.+|+|.|.++..+... +..+|++||++|.+++.|++.+. +++++.+|+.++ .
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~----~------------ 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI----S------------ 108 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC----C------------
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC----C------------
Confidence 4578999999999999998887 55579999999999999999875 689999998763 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE
Q 004133 622 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~ 688 (772)
..||+|++|.--.. + ..-....+++.+.+.| |+++++
T Consensus 109 --------------------~~~D~v~~~~p~~~----~----~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 109 --------------------GKYDTWIMNPPFGS----V----VKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp --------------------CCEEEEEECCCC---------------CHHHHHHHHHHE--EEEEEE
T ss_pred --------------------CCeeEEEECCCchh----c----cCchhHHHHHHHHHhc--CcEEEE
Confidence 46999998531110 0 0112367899999998 554443
No 494
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.10 E-value=3.2e-06 Score=86.25 Aligned_cols=111 Identities=10% Similarity=-0.077 Sum_probs=76.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcC-HHHHHHH---HHhcCCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELD-LTMLNLA---EDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 616 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD-p~v~~vA---~~~Fg~~~~~rl~v~i~Dg~~~l~~~~~~~~~~~ 616 (772)
....+||.||+|+|.++..|....|..+|++||++ +.|+++| ++...-..-++++++.+|+.++ ....
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~------- 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFEL------- 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGG-------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhc-------
Confidence 34568999999999999999887888899999999 8888887 6554211124689999998665 1100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEE
Q 004133 617 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 688 (772)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~ 688 (772)
...+|.|.+...-+. . . .........+|..+++.|+|||.|++
T Consensus 95 ------------------------~d~v~~i~~~~~~~~--~-~--~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 ------------------------KNIADSISILFPWGT--L-L--EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ------------------------TTCEEEEEEESCCHH--H-H--HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred ------------------------cCeEEEEEEeCCCcH--H-h--hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 145677665321000 0 0 00001236789999999999999998
No 495
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.09 E-value=5.6e-06 Score=86.12 Aligned_cols=113 Identities=15% Similarity=0.139 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHH------HHHHHHHhcCCC-CCCCeEEEEccHHHHHHhhcccC
Q 004133 541 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLT------MLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSS 612 (772)
Q Consensus 541 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~------v~~vA~~~Fg~~-~~~rl~v~i~Dg~~~l~~~~~~~ 612 (772)
....+||.||+|.|.++..+...+ |..+|++||+++. +++.|++.+.-. ..++++++.+| ++.....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~--- 116 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDLG--- 116 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCCG---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhccC---
Confidence 455799999999999999998885 6679999999997 899999887321 23689999998 2211110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCCCcHHHHHHHHHccCCCcEEEEEecC
Q 004133 613 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 692 (772)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 692 (772)
......||+|++.--- ..+. . ...+++.++.+++|||.+++..+.
T Consensus 117 -------------------------~~~~~~fD~v~~~~~l----~~~~--~----~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 117 -------------------------PIADQHFDRVVLAHSL----WYFA--S----ANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp -------------------------GGTTCCCSEEEEESCG----GGSS--C----HHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred -------------------------CCCCCCEEEEEEccch----hhCC--C----HHHHHHHHHHHhCCCCEEEEEEec
Confidence 0013679999973211 1111 1 134777777878889999987654
Q ss_pred C
Q 004133 693 R 693 (772)
Q Consensus 693 ~ 693 (772)
.
T Consensus 162 ~ 162 (275)
T 3bkx_A 162 M 162 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 496
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.09 E-value=1e-05 Score=76.10 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCc-hhHHHHHH-cCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccCcccccC-CCccEEEeccc
Q 004133 68 PPPQILVPGCGNS-RLSEHLYD-AGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQVFMD-ETFDVILDKGG 144 (772)
Q Consensus 68 ~~~~ILDlGCG~G-~ls~~La~-~g~~~V~gvDiS~~~I~~a~~~~~~~~~~v~f~~~D~~~l~~~~~-~sfDvVi~~~~ 144 (772)
++.+|||+|||+| +.+..|++ .|+ +|+++|+++.+++ |++.|+++.. ... ..||+|++..
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~--------------~v~dDiF~P~-~~~Y~~~DLIYsir- 97 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG--------------IVRDDITSPR-MEIYRGAALIYSIR- 97 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT--------------EECCCSSSCC-HHHHTTEEEEEEES-
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc--------------eEEccCCCCc-ccccCCcCEEEEcC-
Confidence 4689999999999 79999997 788 6999999996654 8999999854 321 4899998743
Q ss_pred ccccccCccchHHHHHHHHHHHhccccCeEEEEEEcCchhh
Q 004133 145 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 185 (772)
Q Consensus 145 l~~l~~~~~~~~~~~~~l~ei~rvLkpGG~~ii~~~~~~~~ 185 (772)
+++| +...+-++++. -|.-+++..++.+..
T Consensus 98 ----PP~E-----l~~~i~~lA~~--v~adliI~pL~~E~~ 127 (153)
T 2k4m_A 98 ----PPAE-----IHSSLMRVADA--VGARLIIKPLTGEDI 127 (153)
T ss_dssp ----CCTT-----THHHHHHHHHH--HTCEEEEECBTTBCC
T ss_pred ----CCHH-----HHHHHHHHHHH--cCCCEEEEcCCCCcC
Confidence 2222 44555555553 367788888776553
No 497
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.08 E-value=1.8e-05 Score=86.57 Aligned_cols=115 Identities=16% Similarity=0.094 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCchhHHHHHHc------------C----CCeEEEEeCCHHHHHHHHHHhccCC-------------CCcE
Q 004133 69 PPQILVPGCGNSRLSEHLYDA------------G----FHGITNVDFSKVVISDMLRRNVRDR-------------SDMR 119 (772)
Q Consensus 69 ~~~ILDlGCG~G~ls~~La~~------------g----~~~V~gvDiS~~~I~~a~~~~~~~~-------------~~v~ 119 (772)
..+|+|+|||+|.++..+... | --+|..-|.........-+.+.... .+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 589999999999999877331 1 1247777766655443333222110 0112
Q ss_pred EEEeeccC---cccccCCCccEEEecccccccccCccch-------------------------------HHHHHHHHHH
Q 004133 120 WRVMDMTS---MQVFMDETFDVILDKGGLDALMEPELGH-------------------------------KLGNQYLSEV 165 (772)
Q Consensus 120 f~~~D~~~---l~~~~~~sfDvVi~~~~l~~l~~~~~~~-------------------------------~~~~~~l~ei 165 (772)
|..+.... -. |++++||+|+++.+|||+...+..- .....+|+..
T Consensus 133 f~~gvpgSFy~rl-fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRL-FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCC-SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhccc-CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433332 23 7899999999999999997433110 1255679999
Q ss_pred HhccccCeEEEEEEcCchh
Q 004133 166 KRLLKSGGKFVCLTLAESH 184 (772)
Q Consensus 166 ~rvLkpGG~~ii~~~~~~~ 184 (772)
++.|+|||++++...+...
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHEEEEEEEEEEEEECCC
T ss_pred HHHhCCCCEEEEEEecCCC
Confidence 9999999999999887643
No 498
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.08 E-value=2.7e-06 Score=90.76 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=80.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhcCCC-------CCCCeEEEEccHHHHHHhhcccCcc
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-------QDKSLKVHITDGIKFVREMKSSSAT 614 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg~~-------~~~rl~v~i~Dg~~~l~~~~~~~~~ 614 (772)
.+.+||.||+|.|.+...+... +..++++||+++.+++.|++.+.-. ...+++++++|+.+..-...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----- 107 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDK----- 107 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTT-----
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhh-----
Confidence 5679999999999888888774 5669999999999999999886310 23478999999765310000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCC-CcHHHHHHHHHccCCCcEEEEEecCC
Q 004133 615 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVSR 693 (772)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~IivD~~~~d~~~g~s~Pp~~f-~~~~fl~~~~~~L~~~Gilv~Nl~~~ 693 (772)
+ ......||+|++.. . ...+ ..+. --..+|..+++.|+|||+|++.+...
T Consensus 108 -----~-----------------~~~~~~fD~V~~~~--~--l~~~---~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 108 -----F-----------------RDPQMCFDICSCQF--V--CHYS---FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp -----C-----------------SSTTCCEEEEEEET--C--GGGG---GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred -----c-----------------ccCCCCEEEEEEec--c--hhhc---cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 0 00124799999832 1 0000 0000 11589999999999999999988654
No 499
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.06 E-value=2.1e-05 Score=80.97 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=51.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHHhc---CCCCCCCeEEEEccHHH
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIK 603 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---g~~~~~rl~v~i~Dg~~ 603 (772)
.+.+||.||+|+|.+...+....|..+|++||+++.+++.|++.. ++ .++++++.+|+.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 127 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL--SDLIKVVKVPQKT 127 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC--CccEEEEEcchhh
Confidence 457899999999998888887777789999999999999999887 43 4579999999765
No 500
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.06 E-value=2.2e-05 Score=82.61 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=74.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEc-CHHHHHHHHHhc-----CCCC-C----CCeEEEEcc---HHHHH-H
Q 004133 542 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVEL-DLTMLNLAEDYF-----GFTQ-D----KSLKVHITD---GIKFV-R 606 (772)
Q Consensus 542 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEi-Dp~v~~vA~~~F-----g~~~-~----~rl~v~i~D---g~~~l-~ 606 (772)
...+||.||+|+|.++..+.... ..+|++||+ ++.+++.|++.. .... + ++++++..| ...-+ .
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 45689999999999998888763 348999999 999999999887 2111 1 467877443 22222 1
Q ss_pred hhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEE-eCCCCCCCCCCCcCCcCCCcHHHHHHHHHccC---C
Q 004133 607 EMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILII-DVDSPDSSSGMTCPAADFVEGSFLLTVKDALS---E 682 (772)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Iiv-D~~~~d~~~g~s~Pp~~f~~~~fl~~~~~~L~---~ 682 (772)
... ..+||+|+. |+.-.. + .-..+++.+++.|+ |
T Consensus 158 ~~~-------------------------------~~~fD~Ii~~dvl~~~---------~--~~~~ll~~l~~~Lk~~~p 195 (281)
T 3bzb_A 158 CTG-------------------------------LQRFQVVLLADLLSFH---------Q--AHDALLRSVKMLLALPAN 195 (281)
T ss_dssp HHS-------------------------------CSSBSEEEEESCCSCG---------G--GHHHHHHHHHHHBCCTTT
T ss_pred hcc-------------------------------CCCCCEEEEeCcccCh---------H--HHHHHHHHHHHHhcccCC
Confidence 111 257999987 442210 0 13789999999999 9
Q ss_pred --CcEEEEEecCC
Q 004133 683 --QGLFIVNLVSR 693 (772)
Q Consensus 683 --~Gilv~Nl~~~ 693 (772)
||.+++-+..+
T Consensus 196 ~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 196 DPTAVALVTFTHH 208 (281)
T ss_dssp CTTCEEEEEECC-
T ss_pred CCCCEEEEEEEee
Confidence 99877655443
Done!