Query 004141
Match_columns 771
No_of_seqs 583 out of 4422
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 15:36:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 6.1E-56 2.1E-60 520.5 52.5 610 47-771 67-726 (740)
2 3azo_A Aminopeptidase; POP fam 100.0 2.1E-52 7.2E-57 485.7 53.8 587 53-771 33-649 (662)
3 3o4h_A Acylamino-acid-releasin 100.0 8.1E-53 2.8E-57 481.1 47.8 560 24-771 9-580 (582)
4 2xdw_A Prolyl endopeptidase; a 100.0 6E-51 2E-55 476.1 60.6 592 50-771 80-705 (710)
5 1xfd_A DIP, dipeptidyl aminope 100.0 3.8E-53 1.3E-57 497.3 41.9 616 46-771 65-722 (723)
6 2bkl_A Prolyl endopeptidase; m 100.0 1.7E-50 5.8E-55 470.8 53.5 586 48-771 74-676 (695)
7 2ecf_A Dipeptidyl peptidase IV 100.0 1.1E-50 3.6E-55 477.8 50.9 598 46-771 113-740 (741)
8 1z68_A Fibroblast activation p 100.0 1.2E-50 4.2E-55 475.4 48.5 607 45-771 63-719 (719)
9 1yr2_A Prolyl oligopeptidase; 100.0 1.2E-49 4E-54 466.9 55.7 587 47-771 112-718 (741)
10 3iuj_A Prolyl endopeptidase; h 100.0 1.3E-49 4.5E-54 461.9 52.8 603 28-771 66-685 (693)
11 2z3z_A Dipeptidyl aminopeptida 100.0 2.3E-49 8E-54 463.6 53.5 591 47-770 87-706 (706)
12 2xe4_A Oligopeptidase B; hydro 100.0 1.2E-47 4.2E-52 447.6 54.8 598 27-771 103-742 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 2.2E-38 7.4E-43 360.0 43.6 468 218-771 216-707 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 9.9E-25 3.4E-29 235.2 18.9 329 73-468 12-385 (388)
15 4ao6_A Esterase; hydrolase, th 99.9 6E-24 2E-28 214.8 22.1 209 514-771 36-259 (259)
16 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.8E-23 2.7E-27 222.0 32.1 266 52-443 142-408 (415)
17 3hxk_A Sugar hydrolase; alpha- 99.9 9E-24 3.1E-28 216.2 21.1 231 513-770 19-266 (276)
18 3f67_A Putative dienelactone h 99.9 1.7E-23 5.8E-28 209.3 17.6 214 517-769 14-241 (241)
19 2wtm_A EST1E; hydrolase; 1.60A 99.9 3E-23 1E-27 209.1 18.4 241 516-771 8-250 (251)
20 3bxp_A Putative lipase/esteras 99.9 1.4E-22 4.9E-27 207.4 23.5 225 516-769 11-270 (277)
21 3k2i_A Acyl-coenzyme A thioest 99.9 1.3E-22 4.4E-27 220.7 22.8 234 520-771 144-412 (422)
22 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.6E-22 5.4E-27 217.6 22.1 229 517-771 135-365 (386)
23 3doh_A Esterase; alpha-beta hy 99.9 2E-22 6.8E-27 216.1 21.8 216 512-771 148-380 (380)
24 3ebl_A Gibberellin receptor GI 99.9 1.5E-22 5E-27 215.1 19.4 237 513-771 69-352 (365)
25 3bjr_A Putative carboxylestera 99.9 8E-23 2.7E-27 210.0 16.4 225 515-769 26-282 (283)
26 3hlk_A Acyl-coenzyme A thioest 99.9 2E-22 7E-27 220.2 20.3 234 520-771 160-428 (446)
27 1vlq_A Acetyl xylan esterase; 99.9 2.1E-22 7.3E-27 212.5 19.3 241 513-771 73-335 (337)
28 2o2g_A Dienelactone hydrolase; 99.9 6E-22 2.1E-26 195.2 20.1 201 517-771 20-223 (223)
29 3pfb_A Cinnamoyl esterase; alp 99.9 2.4E-22 8.1E-27 204.7 17.5 241 514-769 27-267 (270)
30 3ga7_A Acetyl esterase; phosph 99.9 7.4E-22 2.5E-26 207.2 21.5 226 513-770 68-322 (326)
31 4fbl_A LIPS lipolytic enzyme; 99.9 5.3E-22 1.8E-26 203.4 19.9 222 535-769 49-281 (281)
32 2i3d_A AGR_C_3351P, hypothetic 99.9 2.9E-21 9.8E-26 194.2 24.8 202 514-771 29-234 (249)
33 4a5s_A Dipeptidyl peptidase 4 99.9 2.7E-21 9.2E-26 226.4 28.3 309 46-467 21-400 (740)
34 2gop_A Trilobed protease; beta 99.9 1.3E-21 4.6E-26 207.2 23.2 318 32-464 9-330 (347)
35 1zi8_A Carboxymethylenebutenol 99.9 4.9E-22 1.7E-26 197.9 18.5 208 513-771 8-233 (236)
36 3fak_A Esterase/lipase, ESTE5; 99.9 8.3E-22 2.8E-26 206.0 20.0 224 520-770 66-308 (322)
37 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-20 3.9E-25 204.9 28.4 243 108-466 141-386 (415)
38 3fcy_A Xylan esterase 1; alpha 99.9 2.7E-22 9.3E-27 212.5 15.0 241 512-769 86-344 (346)
39 3ksr_A Putative serine hydrola 99.9 1.3E-22 4.4E-27 209.1 11.9 228 517-770 14-241 (290)
40 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-20 5.1E-25 220.7 29.6 322 32-465 26-413 (741)
41 2zsh_A Probable gibberellin re 99.9 6E-21 2E-25 202.4 23.0 228 518-769 80-351 (351)
42 1l7a_A Cephalosporin C deacety 99.9 2.4E-21 8.2E-26 202.3 19.6 239 513-771 61-317 (318)
43 3c5m_A Oligogalacturonate lyas 99.9 2.6E-21 8.8E-26 208.8 20.1 311 46-468 40-385 (396)
44 2hdw_A Hypothetical protein PA 99.9 3.1E-21 1.1E-25 206.1 20.5 247 512-770 72-367 (367)
45 3trd_A Alpha/beta hydrolase; c 99.9 1E-20 3.5E-25 184.4 21.2 194 513-766 11-207 (208)
46 3hju_A Monoglyceride lipase; a 99.9 7.8E-21 2.7E-25 200.8 21.3 245 512-770 39-312 (342)
47 3pe7_A Oligogalacturonate lyas 99.9 6.6E-21 2.3E-25 205.2 20.1 280 47-424 41-386 (388)
48 3fcx_A FGH, esterase D, S-form 99.9 2.1E-21 7.2E-26 199.1 15.2 231 515-771 24-281 (282)
49 3pe6_A Monoglyceride lipase; a 99.9 2E-20 6.7E-25 193.3 22.6 246 512-770 21-294 (303)
50 2hm7_A Carboxylesterase; alpha 99.9 1.9E-21 6.4E-26 202.6 14.7 231 515-771 55-310 (310)
51 3i6y_A Esterase APC40077; lipa 99.9 4.2E-21 1.4E-25 196.7 17.0 234 515-771 25-279 (280)
52 1lzl_A Heroin esterase; alpha/ 99.9 7.1E-21 2.4E-25 199.4 18.5 237 513-771 56-317 (323)
53 1mpx_A Alpha-amino acid ester 99.9 3E-21 1E-25 218.7 16.3 254 512-771 29-355 (615)
54 3h04_A Uncharacterized protein 99.9 3.5E-20 1.2E-24 188.6 22.5 233 513-771 8-274 (275)
55 2fuk_A XC6422 protein; A/B hyd 99.9 2.4E-20 8.1E-25 183.5 20.2 199 514-771 16-217 (220)
56 2wir_A Pesta, alpha/beta hydro 99.9 2.8E-21 9.6E-26 201.6 14.2 233 515-771 58-312 (313)
57 1vkh_A Putative serine hydrola 99.9 2.5E-21 8.6E-26 197.6 13.5 210 533-766 37-272 (273)
58 1xfd_A DIP, dipeptidyl aminope 99.9 5.3E-20 1.8E-24 215.4 26.6 314 44-466 19-394 (723)
59 3qh4_A Esterase LIPW; structur 99.9 4.1E-21 1.4E-25 200.2 15.1 228 512-771 64-316 (317)
60 3ain_A 303AA long hypothetical 99.9 1.5E-20 5.2E-25 196.3 19.3 227 520-770 76-320 (323)
61 1jfr_A Lipase; serine hydrolas 99.8 1.9E-20 6.6E-25 189.8 19.1 188 522-771 40-232 (262)
62 4e15_A Kynurenine formamidase; 99.8 2.4E-21 8.3E-26 201.0 12.6 199 521-748 68-280 (303)
63 3vis_A Esterase; alpha/beta-hy 99.8 1.1E-20 3.8E-25 196.1 17.5 185 523-771 85-276 (306)
64 2o7r_A CXE carboxylesterase; a 99.8 4.6E-21 1.6E-25 202.2 14.6 235 518-770 63-331 (338)
65 3k6k_A Esterase/lipase; alpha/ 99.8 2.5E-20 8.5E-25 194.9 19.9 222 517-771 66-309 (322)
66 3llc_A Putative hydrolase; str 99.8 3.7E-20 1.2E-24 188.1 20.4 239 514-768 18-268 (270)
67 2c7b_A Carboxylesterase, ESTE1 99.8 1.3E-20 4.3E-25 196.4 16.7 232 515-771 55-309 (311)
68 3ls2_A S-formylglutathione hyd 99.8 1.3E-20 4.4E-25 193.1 16.5 233 516-771 24-279 (280)
69 2b9v_A Alpha-amino acid ester 99.8 2.1E-20 7.3E-25 212.3 19.9 254 512-771 41-367 (652)
70 3e4d_A Esterase D; S-formylglu 99.8 1.1E-20 3.9E-25 193.3 15.3 234 515-771 23-278 (278)
71 3fnb_A Acylaminoacyl peptidase 99.8 2.1E-20 7.2E-25 202.1 17.7 238 517-771 143-402 (405)
72 1jkm_A Brefeldin A esterase; s 99.8 2E-20 6.7E-25 199.0 16.9 241 513-770 87-358 (361)
73 4h0c_A Phospholipase/carboxyle 99.8 3.6E-21 1.2E-25 187.0 10.2 189 533-767 18-209 (210)
74 1z68_A Fibroblast activation p 99.8 5E-20 1.7E-24 215.4 21.9 312 46-466 20-392 (719)
75 3og9_A Protein YAHD A copper i 99.8 6.6E-20 2.3E-24 178.8 19.2 191 525-769 8-208 (209)
76 1lns_A X-prolyl dipeptidyl ami 99.8 9E-20 3.1E-24 210.1 22.0 246 514-771 179-522 (763)
77 1fj2_A Protein (acyl protein t 99.8 5.1E-20 1.8E-24 182.7 17.4 195 525-771 14-229 (232)
78 1ufo_A Hypothetical protein TT 99.8 4.8E-20 1.6E-24 183.4 17.1 211 521-771 13-236 (238)
79 2ojh_A Uncharacterized protein 99.8 8E-19 2.7E-23 180.5 26.7 263 69-455 19-294 (297)
80 2pbl_A Putative esterase/lipas 99.8 2.2E-20 7.5E-25 189.3 14.0 192 518-751 48-246 (262)
81 3dkr_A Esterase D; alpha beta 99.8 4.3E-20 1.5E-24 185.2 15.4 220 535-770 20-249 (251)
82 3bdi_A Uncharacterized protein 99.8 1.9E-19 6.5E-24 175.0 18.6 194 515-768 10-206 (207)
83 1auo_A Carboxylesterase; hydro 99.8 1.7E-19 5.9E-24 177.0 18.4 197 525-771 5-218 (218)
84 3cn9_A Carboxylesterase; alpha 99.8 6.6E-19 2.2E-23 174.0 20.6 184 533-770 20-226 (226)
85 3rm3_A MGLP, thermostable mono 99.8 5.1E-19 1.7E-23 179.9 19.2 219 536-770 39-269 (270)
86 4f0j_A Probable hydrolytic enz 99.8 6E-19 2.1E-23 183.4 20.2 238 517-768 28-313 (315)
87 4fhz_A Phospholipase/carboxyle 99.8 1.9E-19 6.4E-24 182.8 15.6 198 524-770 55-266 (285)
88 3mve_A FRSA, UPF0255 protein V 99.8 2.7E-19 9.2E-24 193.0 17.7 229 517-771 176-414 (415)
89 3b5e_A MLL8374 protein; NP_108 99.8 3.2E-19 1.1E-23 175.9 16.8 198 518-770 15-217 (223)
90 3c5m_A Oligogalacturonate lyas 99.8 2.1E-19 7.3E-24 193.7 16.9 261 101-468 38-330 (396)
91 1jji_A Carboxylesterase; alpha 99.8 7.8E-20 2.7E-24 190.2 12.9 226 516-768 64-310 (311)
92 4b6g_A Putative esterase; hydr 99.8 8.4E-20 2.9E-24 187.3 12.7 233 515-771 30-283 (283)
93 2uz0_A Esterase, tributyrin es 99.8 1.2E-19 4.3E-24 183.8 13.7 231 516-771 16-257 (263)
94 2h1i_A Carboxylesterase; struc 99.8 6.8E-19 2.3E-23 173.9 18.6 183 535-770 36-226 (226)
95 1jjf_A Xylanase Z, endo-1,4-be 99.8 6.4E-19 2.2E-23 179.2 18.7 206 517-769 42-260 (268)
96 3d7r_A Esterase; alpha/beta fo 99.8 7.6E-19 2.6E-23 184.0 19.7 219 521-770 84-322 (326)
97 1k32_A Tricorn protease; prote 99.8 4.7E-18 1.6E-22 206.7 29.6 328 42-454 53-493 (1045)
98 2qjw_A Uncharacterized protein 99.8 9.7E-19 3.3E-23 165.3 17.2 174 535-768 2-175 (176)
99 3d0k_A Putative poly(3-hydroxy 99.8 4.8E-19 1.6E-23 183.7 15.8 216 515-768 34-286 (304)
100 3u0v_A Lysophospholipase-like 99.8 3.1E-18 1.1E-22 170.7 21.1 195 533-771 19-232 (239)
101 2y6u_A Peroxisomal membrane pr 99.8 6.8E-19 2.3E-23 190.2 16.9 249 512-770 24-345 (398)
102 1k8q_A Triacylglycerol lipase, 99.8 4.6E-19 1.6E-23 189.7 15.0 251 513-769 32-377 (377)
103 2r8b_A AGR_C_4453P, uncharacte 99.8 7.5E-19 2.6E-23 176.7 15.1 185 535-771 60-249 (251)
104 1tht_A Thioesterase; 2.10A {Vi 99.8 1.6E-18 5.6E-23 179.1 17.7 221 514-750 13-244 (305)
105 2qru_A Uncharacterized protein 99.8 8.6E-18 2.9E-22 171.2 22.5 229 517-769 13-274 (274)
106 1imj_A CIB, CCG1-interacting f 99.8 3.1E-19 1.1E-23 174.0 11.2 192 515-768 13-208 (210)
107 2fx5_A Lipase; alpha-beta hydr 99.8 1.9E-18 6.4E-23 174.6 17.1 184 523-770 34-228 (258)
108 4ezi_A Uncharacterized protein 99.8 4.7E-18 1.6E-22 179.3 20.7 254 511-771 48-371 (377)
109 1qlw_A Esterase; anisotropic r 99.8 3.6E-18 1.2E-22 178.9 19.0 199 521-770 50-321 (328)
110 3o4h_A Acylamino-acid-releasin 99.8 1.8E-18 6.1E-23 196.9 16.8 233 100-454 23-266 (582)
111 3ia2_A Arylesterase; alpha-bet 99.8 1.9E-18 6.6E-23 175.8 14.8 230 514-767 4-270 (271)
112 3r0v_A Alpha/beta hydrolase fo 99.8 1.3E-17 4.4E-22 168.4 20.8 222 513-768 7-262 (262)
113 1k32_A Tricorn protease; prote 99.8 1.1E-17 3.8E-22 203.4 23.9 326 46-467 19-461 (1045)
114 3azo_A Aminopeptidase; POP fam 99.8 4.6E-18 1.6E-22 196.8 19.6 272 99-468 24-326 (662)
115 2ojh_A Uncharacterized protein 99.8 3.7E-17 1.3E-21 167.9 24.2 249 45-411 45-294 (297)
116 2pl5_A Homoserine O-acetyltran 99.8 1.5E-17 5.1E-22 177.3 21.5 247 517-769 29-365 (366)
117 1q0r_A RDMC, aclacinomycin met 99.8 1.1E-17 3.7E-22 172.9 19.6 231 516-770 8-294 (298)
118 1tqh_A Carboxylesterase precur 99.8 5E-18 1.7E-22 170.2 16.5 217 537-769 16-245 (247)
119 3v48_A Aminohydrolase, putativ 99.8 1.9E-18 6.5E-23 175.6 13.3 218 536-770 14-261 (268)
120 3fob_A Bromoperoxidase; struct 99.8 5.8E-18 2E-22 173.4 16.8 227 514-767 12-280 (281)
121 1sfr_A Antigen 85-A; alpha/bet 99.8 5.6E-18 1.9E-22 175.3 16.7 233 518-771 20-284 (304)
122 1brt_A Bromoperoxidase A2; hal 99.8 5.3E-18 1.8E-22 173.3 16.4 213 538-767 24-276 (277)
123 2z3z_A Dipeptidyl aminopeptida 99.8 9.1E-17 3.1E-21 187.4 28.8 263 100-468 83-392 (706)
124 4fle_A Esterase; structural ge 99.8 3.1E-18 1E-22 166.0 13.6 187 537-767 2-190 (202)
125 1zoi_A Esterase; alpha/beta hy 99.8 1.9E-17 6.6E-22 168.9 20.0 230 515-767 6-275 (276)
126 1a8s_A Chloroperoxidase F; hal 99.8 3E-17 1E-21 167.2 21.3 229 515-767 5-272 (273)
127 1a88_A Chloroperoxidase L; hal 99.8 3.7E-17 1.3E-21 166.7 22.0 231 515-767 5-274 (275)
128 2yys_A Proline iminopeptidase- 99.8 7E-18 2.4E-22 173.2 16.6 229 516-768 10-275 (286)
129 3sty_A Methylketone synthase 1 99.8 6.7E-18 2.3E-22 171.1 16.1 221 534-769 9-266 (267)
130 1a8q_A Bromoperoxidase A1; hal 99.8 2.4E-17 8.2E-22 168.0 19.7 228 515-767 5-273 (274)
131 3kxp_A Alpha-(N-acetylaminomet 99.8 4.6E-18 1.6E-22 177.1 14.6 221 517-767 56-313 (314)
132 3vdx_A Designed 16NM tetrahedr 99.8 1.1E-17 3.8E-22 183.1 18.1 232 513-770 8-280 (456)
133 3dqz_A Alpha-hydroxynitrIle ly 99.8 6.7E-18 2.3E-22 170.1 14.9 218 538-770 5-258 (258)
134 4f21_A Carboxylesterase/phosph 99.8 3.4E-17 1.2E-21 162.7 19.4 203 521-771 25-245 (246)
135 3om8_A Probable hydrolase; str 99.7 5E-18 1.7E-22 172.3 13.6 227 514-767 10-265 (266)
136 3iii_A COCE/NOND family hydrol 99.7 4.5E-18 1.5E-22 188.3 13.6 242 512-771 45-321 (560)
137 3u1t_A DMMA haloalkane dehalog 99.7 7E-18 2.4E-22 174.8 14.3 227 517-770 17-297 (309)
138 1r88_A MPT51/MPB51 antigen; AL 99.7 1.9E-17 6.4E-22 169.1 16.9 233 517-770 21-273 (280)
139 3i1i_A Homoserine O-acetyltran 99.7 1.1E-17 3.7E-22 179.0 15.5 246 519-770 27-373 (377)
140 1mtz_A Proline iminopeptidase; 99.7 2.8E-18 9.5E-23 176.9 10.5 233 517-770 13-293 (293)
141 3i2k_A Cocaine esterase; alpha 99.7 5.7E-18 2E-22 190.3 13.8 243 513-771 14-323 (587)
142 2r11_A Carboxylesterase NP; 26 99.7 1.1E-17 3.8E-22 173.5 15.1 226 517-767 53-305 (306)
143 2xua_A PCAD, 3-oxoadipate ENOL 99.7 6.9E-18 2.3E-22 171.3 13.2 228 517-768 10-264 (266)
144 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 1.3E-17 4.5E-22 171.2 15.3 216 537-768 33-285 (286)
145 3fsg_A Alpha/beta superfamily 99.7 5.7E-18 2E-22 171.8 12.4 217 537-770 21-269 (272)
146 2ocg_A Valacyclovir hydrolase; 99.7 5.4E-17 1.8E-21 163.4 19.0 224 517-766 10-253 (254)
147 3qit_A CURM TE, polyketide syn 99.7 1.5E-17 5.1E-22 169.8 15.0 210 515-750 10-272 (286)
148 3nwo_A PIP, proline iminopepti 99.7 2.6E-17 9E-22 172.7 16.9 237 516-769 35-322 (330)
149 3oos_A Alpha/beta hydrolase fa 99.7 4.7E-18 1.6E-22 173.0 10.8 213 537-765 23-277 (278)
150 3g8y_A SUSD/RAGB-associated es 99.7 7.8E-18 2.7E-22 180.5 12.7 140 512-654 91-262 (391)
151 1c4x_A BPHD, protein (2-hydrox 99.7 2.8E-17 9.4E-22 168.7 16.2 232 516-768 14-284 (285)
152 2qs9_A Retinoblastoma-binding 99.7 2.3E-17 8E-22 158.6 14.7 181 536-770 3-186 (194)
153 1iup_A META-cleavage product h 99.7 1.4E-17 4.7E-22 170.6 13.6 227 517-768 13-272 (282)
154 4dnp_A DAD2; alpha/beta hydrol 99.7 1.9E-17 6.5E-22 167.7 14.4 220 536-768 19-268 (269)
155 2qm0_A BES; alpha-beta structu 99.7 7.5E-18 2.6E-22 171.6 11.0 217 517-766 28-272 (275)
156 1hkh_A Gamma lactamase; hydrol 99.7 1.3E-17 4.6E-22 170.4 13.0 213 538-767 24-278 (279)
157 3qvm_A OLEI00960; structural g 99.7 2.9E-17 9.8E-22 167.5 15.3 219 537-770 28-279 (282)
158 2wue_A 2-hydroxy-6-OXO-6-pheny 99.7 2.4E-17 8.4E-22 169.6 14.5 231 517-768 21-289 (291)
159 3d59_A Platelet-activating fac 99.7 2E-17 7E-22 177.2 14.3 192 533-771 94-351 (383)
160 3bf7_A Esterase YBFF; thioeste 99.7 1.8E-17 6.2E-22 167.0 13.1 215 536-769 15-255 (255)
161 1b6g_A Haloalkane dehalogenase 99.7 2.2E-17 7.4E-22 171.6 13.8 230 519-768 34-308 (310)
162 3h2g_A Esterase; xanthomonas o 99.7 9.7E-17 3.3E-21 172.8 19.3 131 519-654 61-212 (397)
163 3e0x_A Lipase-esterase related 99.7 2.8E-17 9.7E-22 163.8 13.1 207 536-765 15-244 (245)
164 3hss_A Putative bromoperoxidas 99.7 6.4E-17 2.2E-21 166.4 15.7 215 536-768 42-290 (293)
165 3r40_A Fluoroacetate dehalogen 99.7 1E-16 3.4E-21 165.8 17.2 234 515-769 19-303 (306)
166 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 6.7E-17 2.3E-21 166.2 15.7 215 538-767 37-287 (289)
167 2xt0_A Haloalkane dehalogenase 99.7 5.9E-17 2E-21 167.2 15.4 229 519-767 33-296 (297)
168 1uxo_A YDEN protein; hydrolase 99.7 7.5E-17 2.5E-21 154.7 14.6 164 537-751 4-170 (192)
169 3nuz_A Putative acetyl xylan e 99.7 5.2E-17 1.8E-21 174.5 14.6 140 512-654 96-267 (398)
170 2b61_A Homoserine O-acetyltran 99.7 9.9E-17 3.4E-21 171.7 16.7 246 517-768 42-376 (377)
171 1j1i_A META cleavage compound 99.7 8.4E-17 2.9E-21 166.0 15.3 229 517-770 24-283 (296)
172 2wfl_A Polyneuridine-aldehyde 99.7 9.9E-17 3.4E-21 162.5 15.1 218 535-767 8-263 (264)
173 1gkl_A Endo-1,4-beta-xylanase 99.7 3.9E-16 1.3E-20 160.4 19.7 194 515-749 48-272 (297)
174 3g9x_A Haloalkane dehalogenase 99.7 1.9E-17 6.6E-22 170.6 9.3 227 515-768 16-292 (299)
175 3afi_E Haloalkane dehalogenase 99.7 8.6E-17 3E-21 167.6 14.0 229 517-769 15-301 (316)
176 3bwx_A Alpha/beta hydrolase; Y 99.7 2.1E-16 7.2E-21 162.0 16.7 231 514-768 11-284 (285)
177 3p2m_A Possible hydrolase; alp 99.7 5.2E-17 1.8E-21 170.5 12.3 224 518-768 69-329 (330)
178 2xmz_A Hydrolase, alpha/beta h 99.7 1.4E-16 4.7E-21 161.9 14.8 212 538-769 17-266 (269)
179 2e3j_A Epoxide hydrolase EPHB; 99.7 3E-16 1E-20 166.6 17.9 122 516-651 10-131 (356)
180 3i28_A Epoxide hydrolase 2; ar 99.7 2E-16 6.7E-21 178.7 17.4 232 516-770 245-546 (555)
181 1dqz_A 85C, protein (antigen 8 99.7 2.1E-16 7.1E-21 161.6 15.8 217 538-770 30-278 (280)
182 3vgz_A Uncharacterized protein 99.7 1.4E-14 4.7E-19 153.2 30.5 281 48-453 47-334 (353)
183 1xkl_A SABP2, salicylic acid-b 99.7 2.3E-16 7.8E-21 160.6 15.8 218 537-769 4-259 (273)
184 2xdw_A Prolyl endopeptidase; a 99.7 6.4E-16 2.2E-20 179.9 21.3 268 105-466 78-367 (710)
185 1wm1_A Proline iminopeptidase; 99.7 8.4E-16 2.9E-20 160.2 19.9 118 517-651 23-140 (317)
186 4g9e_A AHL-lactonase, alpha/be 99.7 4.3E-17 1.5E-21 166.0 9.8 216 536-769 23-269 (279)
187 2cjp_A Epoxide hydrolase; HET: 99.7 7E-16 2.4E-20 161.7 19.2 120 517-650 19-138 (328)
188 2vat_A Acetyl-COA--deacetylcep 99.7 5E-17 1.7E-21 178.1 10.7 242 518-770 93-443 (444)
189 3c6x_A Hydroxynitrilase; atomi 99.7 1.6E-16 5.5E-21 160.2 13.0 218 537-769 3-256 (257)
190 2gop_A Trilobed protease; beta 99.7 3.7E-16 1.3E-20 165.1 16.0 248 100-464 16-290 (347)
191 1l0q_A Surface layer protein; 99.7 7.3E-15 2.5E-19 157.9 26.4 243 100-468 33-276 (391)
192 3guu_A Lipase A; protein struc 99.7 1.8E-15 6E-20 161.6 21.0 245 511-770 80-406 (462)
193 1ehy_A Protein (soluble epoxid 99.7 1E-15 3.5E-20 157.7 18.3 228 516-766 16-293 (294)
194 2rau_A Putative esterase; NP_3 99.7 6.9E-17 2.3E-21 171.4 9.7 221 536-769 49-353 (354)
195 3bdv_A Uncharacterized protein 99.7 1.6E-15 5.4E-20 145.3 17.7 171 536-770 16-188 (191)
196 3kda_A CFTR inhibitory factor 99.7 1.8E-16 6.2E-21 163.6 11.9 227 515-769 16-294 (301)
197 2bkl_A Prolyl endopeptidase; m 99.7 1.9E-15 6.4E-20 175.5 21.4 270 101-466 70-350 (695)
198 1wom_A RSBQ, sigma factor SIGB 99.7 1.1E-16 3.7E-21 162.9 9.6 220 537-770 20-271 (271)
199 2qvb_A Haloalkane dehalogenase 99.7 1.2E-16 4E-21 164.5 9.8 230 516-769 15-292 (297)
200 1azw_A Proline iminopeptidase; 99.7 2E-15 6.7E-20 157.0 18.4 118 517-651 20-137 (313)
201 1isp_A Lipase; alpha/beta hydr 99.7 9.9E-16 3.4E-20 145.3 14.6 169 537-769 3-176 (181)
202 1yr2_A Prolyl oligopeptidase; 99.7 3E-15 1E-19 175.1 21.6 270 101-466 109-394 (741)
203 3fla_A RIFR; alpha-beta hydrol 99.6 2.3E-16 7.8E-21 159.8 9.8 218 533-769 16-249 (267)
204 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 4.1E-16 1.4E-20 157.6 11.1 226 517-767 7-263 (264)
205 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 2.7E-16 9.2E-21 162.4 9.8 232 515-770 15-294 (302)
206 1ycd_A Hypothetical 27.3 kDa p 99.6 1.7E-15 5.9E-20 151.2 14.9 205 536-771 4-239 (243)
207 3iuj_A Prolyl endopeptidase; h 99.6 1.3E-14 4.3E-19 168.1 24.3 265 46-432 133-415 (693)
208 1m33_A BIOH protein; alpha-bet 99.6 3.3E-16 1.1E-20 157.9 9.7 207 539-768 15-255 (258)
209 3u4y_A Uncharacterized protein 99.6 2.1E-13 7.2E-18 142.7 31.1 267 72-466 20-303 (331)
210 1pja_A Palmitoyl-protein thioe 99.6 1.2E-15 4.2E-20 157.7 13.6 216 534-766 33-301 (302)
211 3s25_A Hypothetical 7-bladed b 99.6 2.2E-14 7.7E-19 146.4 22.6 259 51-466 23-292 (302)
212 1r3d_A Conserved hypothetical 99.6 1.5E-15 5.1E-20 153.7 13.5 210 537-770 16-263 (264)
213 2qmq_A Protein NDRG2, protein 99.6 2.7E-15 9.2E-20 153.8 14.9 235 515-767 17-285 (286)
214 2q0x_A Protein DUF1749, unchar 99.6 2.6E-15 9E-20 157.3 15.1 207 536-769 37-294 (335)
215 3l80_A Putative uncharacterize 99.6 3.3E-16 1.1E-20 161.0 6.9 215 537-770 41-290 (292)
216 3c8d_A Enterochelin esterase; 99.6 1.5E-15 5E-20 162.7 11.9 212 517-769 178-397 (403)
217 2psd_A Renilla-luciferin 2-mon 99.6 2.8E-15 9.6E-20 156.2 13.7 227 517-769 29-305 (318)
218 3b12_A Fluoroacetate dehalogen 99.4 5.1E-17 1.7E-21 167.8 0.0 220 536-769 24-292 (304)
219 3u4y_A Uncharacterized protein 99.6 3.8E-13 1.3E-17 140.8 28.5 258 46-430 44-312 (331)
220 2gzs_A IROE protein; enterobac 99.6 4.8E-15 1.6E-19 150.7 13.3 211 518-768 24-264 (278)
221 1pby_B Quinohemoprotein amine 99.6 1.1E-13 3.7E-18 145.1 23.2 261 101-468 36-311 (337)
222 3hfq_A Uncharacterized protein 99.6 1.8E-13 6.3E-18 144.3 23.7 267 49-430 47-327 (347)
223 1gxr_A ESG1, transducin-like e 99.6 1.2E-12 4.2E-17 136.8 28.7 265 50-452 60-326 (337)
224 3scy_A Hypothetical bacterial 99.6 5.7E-13 1.9E-17 141.4 26.2 269 72-453 27-326 (361)
225 2wj6_A 1H-3-hydroxy-4-oxoquina 99.6 9.7E-15 3.3E-19 148.7 11.4 228 517-768 12-271 (276)
226 1l0q_A Surface layer protein; 99.6 3.7E-13 1.3E-17 144.5 24.4 245 47-429 37-282 (391)
227 1nr0_A Actin interacting prote 99.6 5.8E-13 2E-17 152.1 27.0 313 50-444 27-379 (611)
228 1ri6_A Putative isomerase YBHE 99.5 2.1E-12 7.3E-17 135.4 29.0 243 100-452 39-296 (343)
229 3vgz_A Uncharacterized protein 99.5 2.2E-12 7.7E-17 136.1 28.8 248 101-467 43-303 (353)
230 3bws_A Protein LP49; two-domai 99.5 1.6E-13 5.3E-18 149.7 20.1 290 101-465 125-430 (433)
231 3ow8_A WD repeat-containing pr 99.5 1.2E-12 4.1E-17 136.4 25.3 224 99-451 81-309 (321)
232 1ri6_A Putative isomerase YBHE 99.5 2E-12 6.8E-17 135.7 27.2 257 49-429 45-317 (343)
233 2ymu_A WD-40 repeat protein; u 99.5 1.3E-13 4.3E-18 156.5 19.1 263 99-451 304-568 (577)
234 3qyj_A ALR0039 protein; alpha/ 99.5 5.5E-14 1.9E-18 144.3 14.2 120 515-650 11-130 (291)
235 3hfq_A Uncharacterized protein 99.5 2.1E-12 7.1E-17 136.2 26.8 275 73-465 17-315 (347)
236 4gqb_B Methylosome protein 50; 99.5 1.6E-12 5.5E-17 136.7 25.7 230 100-452 84-319 (344)
237 3qmv_A Thioesterase, REDJ; alp 99.5 8.8E-15 3E-19 149.5 8.0 199 536-751 50-264 (280)
238 1nr0_A Actin interacting prote 99.5 5.3E-13 1.8E-17 152.4 23.6 184 50-262 68-258 (611)
239 4i19_A Epoxide hydrolase; stru 99.5 8E-14 2.7E-18 148.6 15.2 122 515-651 74-204 (388)
240 2xe4_A Oligopeptidase B; hydro 99.5 9.4E-13 3.2E-17 153.3 25.4 263 45-430 177-466 (751)
241 3s25_A Hypothetical 7-bladed b 99.5 3.2E-13 1.1E-17 137.8 18.8 235 106-468 21-256 (302)
242 1qe3_A PNB esterase, para-nitr 99.5 3.6E-15 1.2E-19 163.4 4.4 228 515-751 79-316 (489)
243 3c5v_A PME-1, protein phosphat 99.5 1.5E-13 5.1E-18 143.0 16.0 104 537-650 38-145 (316)
244 4h5i_A Guanine nucleotide-exch 99.5 1.7E-12 6E-17 137.8 23.4 236 65-420 97-343 (365)
245 4g56_B MGC81050 protein; prote 99.5 2E-13 6.9E-18 144.7 15.5 284 99-466 43-342 (357)
246 1r5m_A SIR4-interacting protei 99.5 1.6E-12 5.5E-17 140.7 22.9 266 99-452 109-414 (425)
247 2ymu_A WD-40 repeat protein; u 99.5 9.9E-13 3.4E-17 149.1 21.9 264 99-451 263-527 (577)
248 1gxr_A ESG1, transducin-like e 99.5 9.2E-13 3.2E-17 137.8 19.0 279 99-467 10-296 (337)
249 3scy_A Hypothetical bacterial 99.5 2.3E-12 7.8E-17 136.7 22.3 266 49-430 57-347 (361)
250 2pm9_A Protein WEB1, protein t 99.5 2.4E-12 8.2E-17 139.3 22.8 293 49-424 20-339 (416)
251 3gff_A IROE-like serine hydrol 99.5 1E-13 3.5E-18 143.4 10.7 207 518-766 23-262 (331)
252 3zwl_B Eukaryotic translation 99.5 9.2E-12 3.1E-16 131.9 26.1 279 49-467 40-346 (369)
253 3ow8_A WD repeat-containing pr 99.5 3.9E-12 1.3E-16 132.5 21.9 193 99-417 123-318 (321)
254 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.7E-11 5.9E-16 134.3 28.0 260 100-466 104-392 (450)
255 3fm0_A Protein CIAO1; WDR39,SG 99.4 6.6E-12 2.2E-16 132.3 22.9 285 100-452 18-323 (345)
256 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.4E-11 8.3E-16 129.0 26.2 270 100-465 41-339 (365)
257 1got_B GT-beta; complex (GTP-b 99.4 5.5E-12 1.9E-16 132.6 20.8 268 99-451 56-331 (340)
258 3fle_A SE_1780 protein; struct 99.4 2.1E-12 7.2E-17 127.6 16.3 211 537-766 6-247 (249)
259 4ery_A WD repeat-containing pr 99.4 1.4E-11 4.6E-16 127.8 22.9 274 99-456 24-303 (312)
260 3pic_A CIP2; alpha/beta hydrol 99.4 6.5E-12 2.2E-16 127.5 18.4 217 518-771 89-346 (375)
261 4gqb_B Methylosome protein 50; 99.4 7E-12 2.4E-16 131.8 19.2 230 65-419 96-330 (344)
262 3zwl_B Eukaryotic translation 99.4 2.6E-11 8.8E-16 128.4 23.8 245 99-454 33-281 (369)
263 4g56_B MGC81050 protein; prote 99.4 1.1E-12 3.8E-17 138.9 13.1 286 49-419 50-342 (357)
264 3lcr_A Tautomycetin biosynthet 99.4 4.7E-12 1.6E-16 131.4 17.4 214 535-769 79-302 (319)
265 3bws_A Protein LP49; two-domai 99.4 6.8E-12 2.3E-16 136.6 19.6 206 201-467 174-390 (433)
266 3iz6_a 40S ribosomal protein R 99.4 1E-10 3.5E-15 124.9 28.3 275 99-450 67-362 (380)
267 4h5i_A Guanine nucleotide-exch 99.4 1.8E-11 6E-16 130.0 21.9 197 50-359 142-344 (365)
268 3vl1_A 26S proteasome regulato 99.4 9.7E-12 3.3E-16 134.7 19.8 278 55-467 61-365 (420)
269 3ei3_B DNA damage-binding prot 99.4 2.4E-10 8.1E-15 122.1 30.1 274 71-465 95-380 (383)
270 2pbi_B Guanine nucleotide-bind 99.4 2.1E-11 7.1E-16 128.9 21.0 269 99-451 65-345 (354)
271 4g4g_A 4-O-methyl-glucuronoyl 99.4 6.7E-12 2.3E-16 128.6 16.1 215 519-771 123-380 (433)
272 1erj_A Transcriptional repress 99.4 2.2E-11 7.4E-16 130.9 21.0 277 99-442 65-362 (393)
273 3g02_A Epoxide hydrolase; alph 99.4 2.1E-12 7.2E-17 138.0 12.7 120 517-650 93-219 (408)
274 3ds8_A LIN2722 protein; unkonw 99.4 1.9E-12 6.6E-17 129.6 11.5 210 538-770 4-243 (254)
275 4fol_A FGH, S-formylglutathion 99.4 3.7E-12 1.3E-16 129.5 13.2 227 517-771 24-297 (299)
276 1jmx_B Amine dehydrogenase; ox 99.4 2.8E-11 9.4E-16 127.3 20.2 262 103-468 4-326 (349)
277 3fm0_A Protein CIAO1; WDR39,SG 99.4 4.4E-11 1.5E-15 125.9 21.6 299 49-419 24-334 (345)
278 2j04_A TAU60, YPL007P, hypothe 99.3 2.9E-11 1E-15 131.1 20.1 259 99-463 16-295 (588)
279 1kez_A Erythronolide synthase; 99.3 1.8E-12 6.2E-17 133.6 10.3 210 533-769 63-281 (300)
280 3frx_A Guanine nucleotide-bind 99.3 2.3E-10 7.9E-15 118.9 25.9 222 99-452 66-306 (319)
281 2d81_A PHB depolymerase; alpha 99.3 1.8E-12 6.2E-17 132.5 9.5 149 611-770 6-176 (318)
282 3sfz_A APAF-1, apoptotic pepti 99.3 3.6E-11 1.2E-15 149.4 23.2 235 154-468 963-1208(1249)
283 2ynn_A Coatomer subunit beta'; 99.3 2.6E-11 9E-16 125.1 18.4 262 99-446 14-284 (304)
284 3lp5_A Putative cell surface h 99.3 8.5E-12 2.9E-16 123.2 13.8 198 538-767 5-232 (250)
285 1pby_B Quinohemoprotein amine 99.3 4.7E-11 1.6E-15 124.8 20.3 228 125-468 12-270 (337)
286 1got_B GT-beta; complex (GTP-b 99.3 2.1E-11 7.3E-16 128.1 17.4 260 69-416 74-339 (340)
287 3i2n_A WD repeat-containing pr 99.3 3.4E-11 1.1E-15 127.0 19.0 291 99-466 19-352 (357)
288 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.3E-10 4.3E-15 123.5 23.5 256 49-421 47-342 (365)
289 1vyh_C Platelet-activating fac 99.3 2.1E-11 7.1E-16 131.8 17.5 278 56-417 114-408 (410)
290 3mkq_A Coatomer beta'-subunit; 99.3 1.4E-11 4.7E-16 146.0 17.5 236 47-361 19-262 (814)
291 1vyh_C Platelet-activating fac 99.3 6.3E-11 2.1E-15 128.0 21.0 267 99-451 109-399 (410)
292 4e54_B DNA damage-binding prot 99.3 3.3E-10 1.1E-14 123.4 26.8 265 65-449 135-417 (435)
293 3dw8_B Serine/threonine-protei 99.3 1.2E-10 4E-15 127.2 23.1 178 195-429 176-380 (447)
294 1r5m_A SIR4-interacting protei 99.3 6.7E-11 2.3E-15 127.9 20.5 289 99-468 46-362 (425)
295 3dwl_C Actin-related protein 2 99.3 9.7E-12 3.3E-16 132.6 13.6 234 100-449 13-268 (377)
296 3sfz_A APAF-1, apoptotic pepti 99.3 2.6E-11 8.9E-16 150.6 18.3 272 100-451 963-1237(1249)
297 4aez_A CDC20, WD repeat-contai 99.3 3.3E-10 1.1E-14 121.9 24.6 274 58-468 99-381 (401)
298 3ils_A PKS, aflatoxin biosynth 99.3 1.4E-11 4.7E-16 124.4 12.8 211 534-766 18-264 (265)
299 1ukc_A ESTA, esterase; fungi, 99.3 1.8E-12 6.1E-17 143.0 6.2 222 515-750 82-327 (522)
300 2xzm_R RACK1; ribosome, transl 99.3 1.4E-10 4.7E-15 122.0 20.2 248 99-419 77-339 (343)
301 1tca_A Lipase; hydrolase(carbo 99.3 7.6E-12 2.6E-16 129.0 10.2 215 520-768 15-243 (317)
302 2k2q_B Surfactin synthetase th 99.3 2.7E-12 9.2E-17 127.7 6.6 208 535-768 11-236 (242)
303 2pbi_B Guanine nucleotide-bind 99.3 8.9E-11 3E-15 124.0 18.7 262 68-416 82-353 (354)
304 3mkq_A Coatomer beta'-subunit; 99.3 4.3E-11 1.5E-15 141.6 17.9 262 99-447 14-285 (814)
305 1nir_A Nitrite reductase; hemo 99.3 6.1E-10 2.1E-14 124.4 25.9 267 100-468 223-515 (543)
306 3i2n_A WD repeat-containing pr 99.3 8.4E-11 2.9E-15 123.9 18.1 293 49-418 26-351 (357)
307 4ery_A WD repeat-containing pr 99.3 1.4E-10 4.8E-15 120.1 19.2 273 49-418 31-310 (312)
308 2pm9_A Protein WEB1, protein t 99.3 2.9E-11 1E-15 130.6 14.6 293 100-468 14-338 (416)
309 1jmx_B Amine dehydrogenase; ox 99.3 3.8E-10 1.3E-14 118.5 22.8 115 100-252 44-160 (349)
310 2aq5_A Coronin-1A; WD40 repeat 99.3 2.6E-10 9E-15 122.7 21.7 256 70-448 55-329 (402)
311 1k8k_C P40, ARP2/3 complex 41 99.3 6E-10 2.1E-14 118.1 24.1 252 49-420 16-274 (372)
312 2mad_H Methylamine dehydrogena 99.3 1.1E-08 3.8E-13 108.2 33.6 258 103-468 70-351 (373)
313 3frx_A Guanine nucleotide-bind 99.2 7.3E-10 2.5E-14 115.1 23.4 230 99-451 18-256 (319)
314 2ynn_A Coatomer subunit beta'; 99.2 7E-11 2.4E-15 122.0 15.2 233 50-361 22-262 (304)
315 2vdu_B TRNA (guanine-N(7)-)-me 99.2 5.7E-10 1.9E-14 122.1 23.2 175 218-465 125-337 (450)
316 1k8k_C P40, ARP2/3 complex 41 99.2 7.2E-10 2.5E-14 117.5 23.0 249 99-467 9-274 (372)
317 3vl1_A 26S proteasome regulato 99.2 1.9E-10 6.6E-15 124.4 18.8 255 101-468 59-323 (420)
318 2xzm_R RACK1; ribosome, transl 99.2 4.6E-10 1.6E-14 118.0 20.8 276 99-451 22-328 (343)
319 3jrp_A Fusion protein of prote 99.2 2.3E-09 8E-14 113.7 26.2 244 99-466 12-286 (379)
320 3dm0_A Maltose-binding peripla 99.2 5.6E-10 1.9E-14 129.4 22.9 279 67-418 400-691 (694)
321 3dwl_C Actin-related protein 2 99.2 8.1E-11 2.8E-15 125.4 14.3 210 50-361 20-239 (377)
322 3k26_A Polycomb protein EED; W 99.2 7.5E-09 2.6E-13 109.2 29.3 289 51-452 31-355 (366)
323 2pm7_B Protein transport prote 99.2 1.3E-09 4.4E-14 111.9 22.6 234 99-452 10-274 (297)
324 1sq9_A Antiviral protein SKI8; 99.2 2.5E-10 8.7E-15 122.4 17.9 293 67-419 31-394 (397)
325 1pgu_A Actin interacting prote 99.2 2.4E-09 8.2E-14 122.0 27.0 277 50-466 27-327 (615)
326 3lrv_A PRE-mRNA-splicing facto 99.2 8E-09 2.7E-13 108.4 28.9 164 155-426 128-298 (343)
327 4e54_B DNA damage-binding prot 99.2 3.1E-09 1.1E-13 115.6 25.9 206 99-425 120-330 (435)
328 4aow_A Guanine nucleotide-bind 99.2 1.1E-09 3.8E-14 114.4 21.1 287 99-468 39-338 (340)
329 2j04_A TAU60, YPL007P, hypothe 99.2 1.4E-10 4.7E-15 125.9 13.3 183 99-335 86-286 (588)
330 4aez_A CDC20, WD repeat-contai 99.2 3.5E-09 1.2E-13 113.8 24.3 239 101-467 96-336 (401)
331 1erj_A Transcriptional repress 99.2 3.7E-09 1.3E-13 113.3 24.3 246 49-419 131-388 (393)
332 3ei3_B DNA damage-binding prot 99.2 3.9E-09 1.3E-13 112.6 24.0 204 99-424 74-284 (383)
333 2aq5_A Coronin-1A; WD40 repeat 99.2 1.3E-09 4.5E-14 117.2 20.4 183 218-468 104-300 (402)
334 3dm0_A Maltose-binding peripla 99.2 6.1E-10 2.1E-14 129.1 18.9 244 99-427 383-637 (694)
335 1yfq_A Cell cycle arrest prote 99.1 2.3E-09 7.8E-14 112.2 20.2 241 99-468 12-283 (342)
336 2hes_X YDR267CP; beta-propelle 99.1 1.2E-08 4.1E-13 106.4 25.6 262 67-449 29-314 (330)
337 4aow_A Guanine nucleotide-bind 99.1 4.5E-09 1.5E-13 109.8 22.2 276 70-424 59-339 (340)
338 1yfq_A Cell cycle arrest prote 99.1 1.2E-08 4.1E-13 106.7 25.5 275 50-455 20-315 (342)
339 1sq9_A Antiviral protein SKI8; 99.1 1.8E-09 6.3E-14 115.6 19.5 274 99-445 17-367 (397)
340 3e5z_A Putative gluconolactona 99.1 8.8E-09 3E-13 105.6 23.8 252 100-468 29-287 (296)
341 1ei9_A Palmitoyl protein thioe 99.1 6.7E-10 2.3E-14 112.3 15.0 105 539-650 7-115 (279)
342 1thg_A Lipase; hydrolase(carbo 99.1 4.1E-11 1.4E-15 132.7 6.5 132 515-651 102-252 (544)
343 3iz6_a 40S ribosomal protein R 99.1 6.5E-10 2.2E-14 118.6 15.7 273 65-418 81-373 (380)
344 2h7c_A Liver carboxylesterase 99.1 5.4E-11 1.8E-15 132.0 6.7 133 515-652 95-233 (542)
345 1nir_A Nitrite reductase; hemo 99.1 6.5E-09 2.2E-13 116.0 23.5 236 105-467 144-402 (543)
346 1pgu_A Actin interacting prote 99.1 2.9E-09 1E-13 121.2 20.5 241 99-467 19-283 (615)
347 3dr2_A Exported gluconolactona 99.1 1.5E-08 5.3E-13 104.3 24.1 251 101-464 47-303 (305)
348 4a11_B DNA excision repair pro 99.1 1.1E-07 3.9E-12 101.7 31.7 259 99-468 100-366 (408)
349 1gpl_A RP2 lipase; serine este 99.1 6.5E-11 2.2E-15 127.5 6.0 112 535-651 68-181 (432)
350 3jrp_A Fusion protein of prote 99.1 5.2E-09 1.8E-13 111.0 20.8 239 48-420 18-287 (379)
351 1llf_A Lipase 3; candida cylin 99.1 4.3E-11 1.5E-15 132.2 4.6 131 515-650 94-243 (534)
352 4gga_A P55CDC, cell division c 99.1 2.4E-09 8.2E-14 116.0 17.9 266 71-418 124-393 (420)
353 2oiz_A Aromatic amine dehydrog 99.1 8.9E-08 3.1E-12 101.0 29.5 121 322-468 205-335 (361)
354 3bg1_A Protein SEC13 homolog; 99.1 7.9E-09 2.7E-13 107.1 20.3 233 99-452 14-282 (316)
355 2pm7_B Protein transport prote 99.1 8.9E-09 3.1E-13 105.6 20.5 242 50-426 18-290 (297)
356 3odt_A Protein DOA1; ubiquitin 99.0 7.3E-09 2.5E-13 106.7 19.7 271 99-468 19-297 (313)
357 2xyi_A Probable histone-bindin 99.0 1.1E-08 3.8E-13 111.1 22.0 180 218-465 204-408 (430)
358 2ogt_A Thermostable carboxyles 99.0 3.5E-10 1.2E-14 124.1 9.9 134 515-652 81-224 (498)
359 2dg1_A DRP35, lactonase; beta 99.0 4.3E-08 1.5E-12 102.2 25.6 258 101-466 47-315 (333)
360 3g4e_A Regucalcin; six bladed 99.0 3.9E-08 1.3E-12 100.8 24.6 243 101-455 15-264 (297)
361 2xyi_A Probable histone-bindin 99.0 7.4E-09 2.5E-13 112.4 19.7 147 218-419 254-409 (430)
362 3c75_H MADH, methylamine dehyd 99.0 1.1E-07 3.6E-12 101.3 27.7 299 51-468 82-403 (426)
363 4gga_A P55CDC, cell division c 99.0 1.1E-07 3.8E-12 102.7 28.3 247 99-468 106-354 (420)
364 3sjl_D Methylamine dehydrogena 99.0 4.5E-07 1.6E-11 94.6 31.5 125 321-468 230-364 (386)
365 3dw8_B Serine/threonine-protei 99.0 1.5E-08 5.2E-13 110.3 21.6 158 99-361 178-376 (447)
366 3jro_A Fusion protein of prote 99.0 1.3E-08 4.6E-13 118.7 22.0 230 99-451 10-273 (753)
367 2ha2_A ACHE, acetylcholinester 99.0 2.8E-10 9.7E-15 126.2 7.2 132 515-651 93-232 (543)
368 3mmy_A MRNA export factor; mRN 99.0 3.1E-08 1.1E-12 104.4 22.5 109 99-287 40-158 (368)
369 4ggc_A P55CDC, cell division c 99.0 1.5E-08 5.3E-13 104.5 19.3 262 72-417 45-312 (318)
370 2j04_B YDR362CP, TAU91; beta p 99.0 4.1E-09 1.4E-13 116.8 15.5 303 66-445 177-496 (524)
371 2ghs_A AGR_C_1268P; regucalcin 99.0 7.8E-08 2.7E-12 100.0 24.4 236 101-455 51-294 (326)
372 3f3f_A Nucleoporin SEH1; struc 99.0 6.7E-08 2.3E-12 100.7 23.7 204 99-420 12-249 (351)
373 2bce_A Cholesterol esterase; h 99.0 3.5E-10 1.2E-14 125.7 5.9 131 515-650 77-222 (579)
374 3vu4_A KMHSV2; beta-propeller 99.0 3.6E-08 1.2E-12 103.9 20.8 230 99-418 20-269 (355)
375 3bg1_A Protein SEC13 homolog; 98.9 2.9E-08 9.9E-13 102.8 19.6 246 50-428 22-300 (316)
376 2fj0_A JuvenIle hormone estera 98.9 2E-10 7E-15 127.5 3.4 131 515-651 87-233 (551)
377 3icv_A Lipase B, CALB; circula 98.9 2.6E-09 9E-14 107.9 11.0 117 521-652 50-170 (316)
378 2oaj_A Protein SNI1; WD40 repe 98.9 3.2E-08 1.1E-12 117.5 22.2 216 99-427 18-247 (902)
379 1qks_A Cytochrome CD1 nitrite 98.9 4.4E-07 1.5E-11 101.0 30.1 317 17-468 113-478 (567)
380 1jmk_C SRFTE, surfactin synthe 98.9 3.4E-09 1.2E-13 104.2 11.6 197 537-767 17-227 (230)
381 3v7d_B Cell division control p 98.9 5.1E-07 1.8E-11 98.8 30.3 296 61-453 131-452 (464)
382 3odt_A Protein DOA1; ubiquitin 98.9 1.1E-08 3.6E-13 105.4 15.6 266 65-425 32-299 (313)
383 3f3f_A Nucleoporin SEH1; struc 98.9 4.3E-08 1.5E-12 102.2 19.9 199 50-359 20-250 (351)
384 2cb9_A Fengycin synthetase; th 98.9 2.6E-09 8.9E-14 106.0 9.9 192 536-769 21-225 (244)
385 1p0i_A Cholinesterase; serine 98.9 2.6E-09 9.1E-14 118.1 10.9 131 515-651 89-227 (529)
386 1ex9_A Lactonizing lipase; alp 98.9 2.5E-09 8.5E-14 108.7 9.7 102 535-651 5-109 (285)
387 3k26_A Polycomb protein EED; W 98.9 3.3E-08 1.1E-12 104.2 18.6 237 70-416 93-362 (366)
388 1bu8_A Protein (pancreatic lip 98.9 1E-09 3.5E-14 118.5 6.4 112 535-651 68-181 (452)
389 1ea5_A ACHE, acetylcholinester 98.9 2.9E-09 1E-13 117.8 9.9 131 515-651 91-229 (537)
390 3jro_A Fusion protein of prote 98.9 8E-08 2.7E-12 112.2 22.4 241 45-419 13-284 (753)
391 4a11_B DNA excision repair pro 98.9 1.8E-07 6.2E-12 100.1 23.6 227 99-427 44-281 (408)
392 1ys1_X Lipase; CIS peptide Leu 98.9 4.9E-09 1.7E-13 107.9 10.3 105 535-651 6-114 (320)
393 3mmy_A MRNA export factor; mRN 98.9 2.8E-08 9.7E-13 104.7 16.5 251 71-408 63-335 (368)
394 1w52_X Pancreatic lipase relat 98.9 1.7E-09 5.7E-14 116.8 6.7 112 535-651 68-181 (452)
395 2hes_X YDR267CP; beta-propelle 98.9 1.8E-07 6.1E-12 97.5 22.0 199 99-419 15-229 (330)
396 3gre_A Serine/threonine-protei 98.9 1.9E-07 6.6E-12 101.3 23.1 261 65-427 79-364 (437)
397 2x5x_A PHB depolymerase PHAZ7; 98.9 5.6E-09 1.9E-13 107.8 10.1 122 521-652 28-166 (342)
398 4ggc_A P55CDC, cell division c 98.9 1.2E-06 4.1E-11 90.1 27.6 244 101-467 28-273 (318)
399 2mad_H Methylamine dehydrogena 98.8 4.6E-07 1.6E-11 95.8 24.6 84 322-428 272-356 (373)
400 2oiz_A Aromatic amine dehydrog 98.8 2.4E-07 8.3E-12 97.7 22.2 98 322-445 259-360 (361)
401 1dx4_A ACHE, acetylcholinester 98.8 7.6E-09 2.6E-13 115.6 10.9 118 534-651 138-267 (585)
402 3bix_A Neuroligin-1, neuroligi 98.8 2.2E-09 7.5E-14 119.7 6.0 130 515-650 108-248 (574)
403 4gq1_A NUP37; propeller, trans 98.8 8.9E-08 3E-12 102.5 18.2 258 103-451 94-378 (393)
404 3tej_A Enterobactin synthase c 98.8 1.2E-08 4.2E-13 106.1 11.1 210 536-766 100-327 (329)
405 2hfk_A Pikromycin, type I poly 98.8 3.9E-09 1.3E-13 109.5 7.1 208 539-769 91-311 (319)
406 3n2z_B Lysosomal Pro-X carboxy 98.8 2.2E-08 7.4E-13 107.0 12.1 109 536-649 38-159 (446)
407 4gq1_A NUP37; propeller, trans 98.8 1.2E-07 4.1E-12 101.4 18.2 90 65-170 104-204 (393)
408 3sjl_D Methylamine dehydrogena 98.8 1.7E-06 5.8E-11 90.3 25.5 101 320-443 283-384 (386)
409 2j04_B YDR362CP, TAU91; beta p 98.8 9.8E-08 3.4E-12 105.7 16.4 164 218-451 235-416 (524)
410 3vu4_A KMHSV2; beta-propeller 98.8 3.9E-07 1.3E-11 95.9 20.3 188 100-360 60-273 (355)
411 3gre_A Serine/threonine-protei 98.8 3.6E-07 1.2E-11 99.1 20.7 205 99-428 64-298 (437)
412 3e5z_A Putative gluconolactona 98.7 9.5E-07 3.2E-11 90.2 22.4 252 47-427 33-291 (296)
413 2ece_A 462AA long hypothetical 98.7 2E-06 6.8E-11 90.3 24.6 200 216-451 162-399 (462)
414 3c75_H MADH, methylamine dehyd 98.7 1.2E-06 4E-11 93.3 23.3 84 322-428 324-408 (426)
415 1qks_A Cytochrome CD1 nitrite 98.7 5.4E-07 1.9E-11 100.3 21.6 240 103-467 158-421 (567)
416 1hpl_A Lipase; hydrolase(carbo 98.7 7.5E-09 2.6E-13 110.9 6.1 112 535-651 67-180 (449)
417 2zyr_A Lipase, putative; fatty 98.7 6.9E-09 2.4E-13 110.4 5.6 111 535-652 20-167 (484)
418 2oaj_A Protein SNI1; WD40 repe 98.7 2.7E-07 9.1E-12 109.6 19.6 202 156-467 21-242 (902)
419 2dg1_A DRP35, lactonase; beta 98.7 2.2E-06 7.5E-11 89.1 23.8 236 72-421 66-315 (333)
420 1npe_A Nidogen, entactin; glyc 98.7 6.4E-06 2.2E-10 82.6 26.3 204 100-428 37-244 (267)
421 1rp1_A Pancreatic lipase relat 98.7 9.4E-09 3.2E-13 110.2 5.4 111 535-651 68-180 (450)
422 1mda_H Methylamine dehydrogena 98.7 1.9E-06 6.6E-11 90.0 22.3 257 103-468 69-347 (368)
423 3dsm_A Uncharacterized protein 98.6 1.2E-06 4.2E-11 90.9 19.6 189 218-466 105-301 (328)
424 3v7d_B Cell division control p 98.6 1.1E-06 3.9E-11 96.0 20.2 273 105-468 127-422 (464)
425 3lrv_A PRE-mRNA-splicing facto 98.6 2.9E-06 1E-10 88.6 22.3 155 100-359 127-293 (343)
426 1npe_A Nidogen, entactin; glyc 98.6 3.9E-06 1.3E-10 84.2 22.2 179 218-467 58-238 (267)
427 3dr2_A Exported gluconolactona 98.6 1.3E-06 4.6E-11 89.6 19.2 252 46-420 49-304 (305)
428 3tjm_A Fatty acid synthase; th 98.6 4.4E-08 1.5E-12 99.6 7.6 96 535-650 22-123 (283)
429 2ghs_A AGR_C_1268P; regucalcin 98.6 2E-06 6.9E-11 89.2 19.2 233 46-411 53-294 (326)
430 3dsm_A Uncharacterized protein 98.6 7.1E-06 2.4E-10 85.1 23.3 150 218-426 152-305 (328)
431 2ece_A 462AA long hypothetical 98.6 7.4E-06 2.5E-10 86.0 22.7 87 318-426 322-430 (462)
432 3hrp_A Uncharacterized protein 98.6 8.3E-06 2.9E-10 87.3 23.7 220 99-430 131-362 (409)
433 2dst_A Hypothetical protein TT 98.5 2.1E-07 7.1E-12 82.1 8.8 82 537-639 22-103 (131)
434 3g4e_A Regucalcin; six bladed 98.5 2.2E-06 7.4E-11 87.6 16.7 201 156-466 16-228 (297)
435 2w18_A PALB2, fancn, partner a 98.5 1.1E-05 3.7E-10 82.1 20.7 42 280-338 305-348 (356)
436 2oit_A Nucleoporin 214KDA; NH2 98.5 9.5E-06 3.3E-10 87.7 21.3 168 100-359 94-279 (434)
437 2w18_A PALB2, fancn, partner a 98.5 1E-05 3.5E-10 82.3 19.8 231 97-418 110-355 (356)
438 2ovr_B FBW7, F-BOX/WD repeat p 98.5 1.3E-05 4.6E-10 86.9 22.5 306 61-467 128-442 (445)
439 2oit_A Nucleoporin 214KDA; NH2 98.4 4.4E-06 1.5E-10 90.3 17.1 94 217-357 117-222 (434)
440 2hih_A Lipase 46 kDa form; A1 98.4 1.1E-06 3.8E-11 93.2 10.7 107 536-651 51-212 (431)
441 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 6.3E-05 2.2E-09 77.0 24.0 196 218-466 92-298 (314)
442 2iwa_A Glutamine cyclotransfer 98.3 2.6E-05 8.9E-10 76.9 18.8 181 217-468 43-238 (266)
443 1fwx_A Nitrous oxide reductase 98.3 7E-06 2.4E-10 89.3 16.0 114 99-253 85-208 (595)
444 1ijq_A LDL receptor, low-densi 98.3 9.8E-05 3.4E-09 75.9 23.8 229 112-468 3-239 (316)
445 2dsn_A Thermostable lipase; T1 98.3 2.4E-06 8.2E-11 89.3 10.8 103 536-651 5-164 (387)
446 3v65_B Low-density lipoprotein 98.3 0.00012 4E-09 77.7 24.0 180 218-467 138-318 (386)
447 3fvz_A Peptidyl-glycine alpha- 98.3 0.00038 1.3E-08 72.0 27.4 115 319-466 198-321 (329)
448 1mda_H Methylamine dehydrogena 98.3 3.5E-05 1.2E-09 80.4 19.0 83 322-430 269-354 (368)
449 3v64_C Agrin; beta propeller, 98.2 0.00019 6.4E-09 74.9 24.1 177 218-464 95-272 (349)
450 1rwi_B Serine/threonine-protei 98.2 0.00012 4E-09 73.2 21.8 175 218-466 87-263 (270)
451 2iwa_A Glutamine cyclotransfer 98.2 5E-05 1.7E-09 74.9 18.0 204 102-422 24-237 (266)
452 2qe8_A Uncharacterized protein 98.2 0.00021 7.3E-09 74.4 24.1 111 319-452 197-309 (343)
453 1fwx_A Nitrous oxide reductase 98.2 1.5E-05 5.1E-10 86.8 15.4 104 218-358 254-361 (595)
454 2p4o_A Hypothetical protein; p 98.2 0.00029 9.9E-09 72.0 24.4 228 101-453 34-278 (306)
455 3v64_C Agrin; beta propeller, 98.2 0.00053 1.8E-08 71.4 26.2 162 99-360 73-236 (349)
456 3p5b_L Low density lipoprotein 98.2 0.00027 9.1E-09 75.2 23.9 182 218-468 134-321 (400)
457 3v65_B Low-density lipoprotein 98.2 0.00024 8.3E-09 75.2 23.5 161 99-360 116-279 (386)
458 3hrp_A Uncharacterized protein 98.1 0.00035 1.2E-08 74.5 23.1 158 104-360 176-356 (409)
459 3sov_A LRP-6, low-density lipo 98.1 0.00051 1.8E-08 70.4 23.4 161 100-360 36-199 (318)
460 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.00027 9.3E-09 76.5 21.6 264 105-468 124-392 (445)
461 1ijq_A LDL receptor, low-densi 98.0 0.00077 2.6E-08 69.1 22.5 160 99-360 30-197 (316)
462 1p22_A F-BOX/WD-repeat protein 98.0 8.9E-05 3.1E-09 80.1 15.8 185 104-361 137-328 (435)
463 3sov_A LRP-6, low-density lipo 98.0 0.00065 2.2E-08 69.6 21.4 181 218-468 57-239 (318)
464 3no2_A Uncharacterized protein 98.0 0.00079 2.7E-08 67.5 21.5 111 319-464 127-250 (276)
465 1q7f_A NHL, brain tumor CG1071 98.0 0.0029 9.9E-08 63.5 25.9 175 218-465 100-278 (286)
466 3nol_A Glutamine cyclotransfer 98.0 0.00019 6.4E-09 69.9 15.8 178 217-466 64-255 (262)
467 1rwi_B Serine/threonine-protei 97.9 0.00046 1.6E-08 68.7 19.4 134 218-421 129-263 (270)
468 3p5b_L Low density lipoprotein 97.9 0.001 3.5E-08 70.6 22.2 162 99-361 112-280 (400)
469 1n7d_A LDL receptor, low-densi 97.9 7.5E-05 2.6E-09 85.5 13.6 180 218-467 428-614 (699)
470 3m0c_C LDL receptor, low-densi 97.8 0.0024 8.3E-08 73.5 25.1 182 218-468 446-633 (791)
471 1n7d_A LDL receptor, low-densi 97.8 0.0002 6.9E-09 81.9 15.1 146 217-429 474-621 (699)
472 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0037 1.3E-07 70.3 24.9 163 99-361 37-200 (628)
473 1p22_A F-BOX/WD-repeat protein 97.8 0.00087 3E-08 72.2 19.2 211 70-360 151-367 (435)
474 3nol_A Glutamine cyclotransfer 97.7 0.0017 5.7E-08 63.2 17.3 200 102-420 46-254 (262)
475 3m0c_C LDL receptor, low-densi 97.7 0.0036 1.2E-07 72.1 23.0 162 99-361 424-592 (791)
476 1whs_A Serine carboxypeptidase 97.7 0.00028 9.7E-09 68.4 11.6 135 517-654 30-189 (255)
477 3s94_A LRP-6, low-density lipo 97.6 0.0041 1.4E-07 69.9 22.7 205 99-426 40-247 (619)
478 2fp8_A Strictosidine synthase; 97.6 0.0041 1.4E-07 63.8 21.2 194 219-466 102-312 (322)
479 4a0p_A LRP6, LRP-6, low-densit 97.6 0.012 4.1E-07 66.1 26.3 178 218-468 59-238 (628)
480 3mbr_X Glutamine cyclotransfer 97.6 0.0033 1.1E-07 60.5 18.5 179 216-466 41-234 (243)
481 1q7f_A NHL, brain tumor CG1071 97.6 0.0019 6.6E-08 64.8 17.6 94 218-357 142-237 (286)
482 4ebb_A Dipeptidyl peptidase 2; 97.6 0.00031 1.1E-08 75.9 12.1 112 536-651 42-163 (472)
483 3qqz_A Putative uncharacterize 97.6 0.0073 2.5E-07 59.0 20.6 210 99-422 27-253 (255)
484 3qqz_A Putative uncharacterize 97.6 0.017 5.8E-07 56.4 23.0 202 156-464 30-250 (255)
485 1ivy_A Human protective protei 97.6 0.00038 1.3E-08 74.4 12.1 126 518-653 31-183 (452)
486 3fvz_A Peptidyl-glycine alpha- 97.5 0.0076 2.6E-07 62.0 21.5 155 217-428 68-233 (329)
487 2z2n_A Virginiamycin B lyase; 97.5 0.014 4.7E-07 58.6 23.1 274 99-466 15-294 (299)
488 3nok_A Glutaminyl cyclase; bet 97.5 0.0017 5.6E-08 63.2 14.8 175 218-465 75-264 (268)
489 2qc5_A Streptogramin B lactona 97.5 0.035 1.2E-06 55.5 25.2 171 218-465 83-258 (300)
490 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.015 5.1E-07 59.0 21.3 161 100-360 118-301 (314)
491 3no2_A Uncharacterized protein 97.4 0.0039 1.3E-07 62.3 16.1 186 213-468 10-196 (276)
492 2p4o_A Hypothetical protein; p 97.3 0.052 1.8E-06 55.0 23.7 40 100-141 73-113 (306)
493 2qe8_A Uncharacterized protein 97.3 0.0042 1.5E-07 64.4 15.6 67 99-169 67-136 (343)
494 2px6_A Thioesterase domain; th 97.2 0.00074 2.5E-08 69.3 9.1 96 535-650 44-145 (316)
495 3s94_A LRP-6, low-density lipo 97.2 0.078 2.7E-06 59.4 25.9 163 99-361 349-513 (619)
496 2qc5_A Streptogramin B lactona 97.1 0.24 8.4E-06 49.2 26.8 169 218-465 125-298 (300)
497 3mbr_X Glutamine cyclotransfer 97.1 0.043 1.5E-06 52.8 19.2 205 101-421 23-234 (243)
498 3nok_A Glutaminyl cyclase; bet 96.9 0.022 7.6E-07 55.3 15.7 144 217-420 115-264 (268)
499 3tc9_A Hypothetical hydrolase; 96.9 0.016 5.4E-07 62.1 16.1 158 100-358 138-301 (430)
500 3sre_A PON1, serum paraoxonase 96.9 0.16 5.5E-06 52.2 22.5 109 217-359 140-253 (355)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=6.1e-56 Score=520.46 Aligned_cols=610 Identities=15% Similarity=0.179 Sum_probs=427.8
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
.+.||||++|+|.......-+......+|++++.+ ++.++|+..+ +.+..|+|||||++|||+++. .+
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~~~-----~i 134 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK--RQLITEERIP-----NNTQWVTWSPVGHKLAYVWNN-----DI 134 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCC-----TTEEEEEECSSTTCEEEEETT-----EE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCC--CcEEEcccCC-----CcceeeEECCCCCEEEEEECC-----eE
Confidence 34589999999988654433334457888988743 3556665543 568899999999999999764 48
Q ss_pred EEEe-cCCcceEEEecCC------cccccccCC---CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCC
Q 004141 127 FELW-SQSQLEKEFHVPQ------TVHGSVYAD---GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 196 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~------~~~g~~~~~---~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (771)
++++ .+++.++++.... +....||.+ +....+.|||||++|||.+.+..... .|......... ...
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~-~~~~~~~~~~~---~~~ 210 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP-LIEYSFYSDES---LQY 210 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC-EEEEEECCSTT---CSS
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc-eEEEEeecCCC---CCC
Confidence 8777 5666666654211 111112221 12246899999999999986554221 11110000000 000
Q ss_pred CCCCcccccCCcCcccCCccCceEEEEEccC---C---ceeeccCCC-----CCCccceEEEecCCCCCccEEEEEeecC
Q 004141 197 SWKGQGDWEEDWGETYAGKRQPSLFVININS---G---EVQAVKGIP-----KSLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 197 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~---~---~~~~l~~~~-----~~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
.....+.|...+ . ......|+++|+++ + +.+.+. .+ ....+..++|||||+. +++..++.
T Consensus 211 ~~~~~~~yp~~G-~---~~~~~~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~----~~~~~~r~ 281 (740)
T 4a5s_A 211 PKTVRVPYPKAG-A---VNPTVKFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERI----SLQWLRRI 281 (740)
T ss_dssp CEEEEEECCBTT-S---CCCEEEEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEE----EEEEEESS
T ss_pred CcceeecCCCCc-C---cCCeeEEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeE----EEEEeCCC
Confidence 000122232221 1 01234799999999 8 666663 21 4446778999999998 88877543
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-------ceec--CCCCcc-----ccceeecCCCCEE
Q 004141 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-------VVNL--TESISS-----AFFPRFSPDGKFL 331 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~l--t~~~~~-----~~~p~~SpDG~~l 331 (771)
. ....|+++|+ ++++ ..++ ..+... ..+|.|||||+.|
T Consensus 282 ~-----------~~~~i~~~d~-----------------~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 282 Q-----------NYSVMDICDY-----------------DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp T-----------TEEEEEEEEE-----------------ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred C-----------CEEEEEEEEC-----------------CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 3 2237999998 5655 2333 112222 3489999999999
Q ss_pred E-EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-
Q 004141 332 V-FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 409 (771)
Q Consensus 332 ~-f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~- 409 (771)
+ |.+.++ | ..+||++|++++..+++|.+..++.. .+++|++.|+|.++.
T Consensus 334 ~~~~s~~~----G----~~~l~~~~~~~~~~~~lT~g~~~v~~---------------------~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 334 YKIISNEE----G----YRHICYFQIDKKDCTFITKGTWEVIG---------------------IEALTSDYLYYISNEY 384 (740)
T ss_dssp EEEEECTT----S----CEEEEEEETTCSSCEESCCSSSCEEE---------------------EEEECSSEEEEEESCG
T ss_pred EEEEEcCC----C----ceEEEEEECCCCceEecccCCEEEEE---------------------EEEEeCCEEEEEEecC
Confidence 8 666553 3 57899999999888888876543322 134568899999876
Q ss_pred ---CCeeEEEEEECCCCcEE-EecCC----CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCC
Q 004141 410 ---GSSQVIISVNVSSGELL-RITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSS 481 (771)
Q Consensus 410 ---~~~~~l~~~d~~tg~~~-~l~~~----~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 481 (771)
.+..+||++++++++.+ +|+.. ........||++++++++.+++++ |+.+++.+..+++ .+.
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~---~~~------ 454 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK---GLR------ 454 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE---EEE------
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc---EEE------
Confidence 45679999999887765 67743 234566899999999999999987 8889988865432 111
Q ss_pred CCCCCchhhhhccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-Ccch-HHH
Q 004141 482 PISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-KSL 559 (771)
Q Consensus 482 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~-~~~ 559 (771)
+.+.++.+...+....+...+. .++ ..+|.++.++++.|+++++.+++|+||++||+++.... ..|. ...
T Consensus 455 -~l~~n~~~~~~~~~~~~~~~~~------~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~ 526 (740)
T 4a5s_A 455 -VLEDNSALDKMLQNVQMPSKKL------DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWA 526 (740)
T ss_dssp -EEECCHHHHHHHTTEECCEEEE------EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHH
T ss_pred -EeccChhhhhhhhhccCCccEE------EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHH
Confidence 1122333333333322211110 122 55789999999999987778899999999998876421 2222 233
Q ss_pred HHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCC
Q 004141 560 AFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP 638 (771)
Q Consensus 560 ~~la-~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p 638 (771)
..|+ ++||+|+++|+||++++|..+.......++..+++|+.++++++.+++.+|++||+|+||||||++++.++.++|
T Consensus 527 ~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (740)
T 4a5s_A 527 TYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS 606 (740)
T ss_dssp HHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCC
Confidence 4555 599999999999999999988877777888888999999999999888789999999999999999999999999
Q ss_pred CceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCC-ChhhHHHHhhcCcccccCCCCC-cEEEEeeCCCC
Q 004141 639 DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDL 716 (771)
Q Consensus 639 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-P~lii~G~~D~ 716 (771)
++|+++|+.+|+.++..+. ..+.+. +...+ ..+....+...+|...+.++++ |+||+||+.|.
T Consensus 607 ~~~~~~v~~~p~~~~~~~~-------~~~~~~--------~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 671 (740)
T 4a5s_A 607 GVFKCGIAVAPVSRWEYYD-------SVYTER--------YMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADD 671 (740)
T ss_dssp SCCSEEEEESCCCCGGGSB-------HHHHHH--------HHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCS
T ss_pred CceeEEEEcCCccchHHhh-------hHHHHH--------HcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCC
Confidence 9999999999998765331 111111 11122 1345567888899999999986 99999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+||++++.+++++|+.++++++++++|+++|.+........++..+.+||+++|+
T Consensus 672 ~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 672 NVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp SSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999986666677889999999999874
No 2
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=2.1e-52 Score=485.65 Aligned_cols=587 Identities=18% Similarity=0.236 Sum_probs=419.6
Q ss_pred cceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccc----cccceEEEeC--CCCCe-EEEEecCCCCCCe
Q 004141 53 GTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE----MTGASAVVPS--PSGSK-LLVVRNPENESPI 125 (771)
Q Consensus 53 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~----~~~~~~~~~S--PdG~~-la~~~~~~~~~~~ 125 (771)
|..++|.....+ ...+..||.+ ..++..++++..+.... ......+.|| |||++ |||.... ..+
T Consensus 33 ~~~~~~~~~~~~---~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~---~~~ 103 (662)
T 3azo_A 33 GDEVWWVAPRPA---EAGRATLVRR---RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG---DQR 103 (662)
T ss_dssp TTEEEEEEEETT---TTTEEEEEEE---CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT---TCC
T ss_pred CCeEEEEecCcc---cCCcEEEEEE---CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC---CCe
Confidence 457888876432 1245677775 23446677765542210 0001145565 99999 9998754 356
Q ss_pred EEEEecC----CcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 004141 126 QFELWSQ----SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 201 (771)
Q Consensus 126 ~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (771)
+|.+..+ +..++++......++ .....++|||||++|+|.+.+.....
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~~~~~~spDg~~l~~~~~~~~~~~----------------------- 155 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGG-----LRWADPVLLPERGEVWCMAEEFTGEG----------------------- 155 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTC-----EEEEEEEEETTTTEEEEEEEEECSSS-----------------------
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCC-----ccccCcEECCCCCEEEEEEecccCCC-----------------------
Confidence 8888843 666666553211110 12258999999999999976531100
Q ss_pred ccccCCcCcccCCccCceEEEEEccC------CceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004141 202 GDWEEDWGETYAGKRQPSLFVININS------GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 202 ~~~~~d~g~~~~~~~~~~l~v~d~~~------~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
. .....+|+++|+++ ++.+.+ + .....+..++|||||++ |+|+++......
T Consensus 156 --------~---~~~~~~i~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~SpDG~~----la~~~~~~~~~~----- 213 (662)
T 3azo_A 156 --------P---SDVRRFLAAVPLDGSAAADRSAVREL--SDDAHRFVTGPRLSPDGRQ----AVWLAWDHPRMP----- 213 (662)
T ss_dssp --------T---TCEEEEEEEEETTSTTTTCGGGSEES--SCSCSSEECCCEECTTSSE----EEEEEECTTCCT-----
T ss_pred --------C---CCceeEEEEEECCCCccccCCceeEE--EecCCCcccCceECCCCCE----EEEEECCCCCCC-----
Confidence 0 11447899999999 888888 5 55556778999999999 999986442100
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCC-CC---cceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004141 275 CYNRPCALYAVRVSLYKSEASELELKESSSE-DL---PVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~---~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
-...+||++|+ + ++ +.++|+.. ...+..|.|||||+ |+|.+..+ | ..
T Consensus 214 --~~~~~i~~~d~-----------------~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~----~----~~ 265 (662)
T 3azo_A 214 --WEGTELKTARV-----------------TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT----G----WW 265 (662)
T ss_dssp --TTCEEEEEEEE-----------------CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT----S----SC
T ss_pred --CCCcEEEEEEE-----------------CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC----C----Ce
Confidence 02248999998 5 45 66777754 46788999999999 88888664 2 45
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004141 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
+||++|+.+++.++++..... ...| .|......++|++|++ ++++... +..+||.+|++++++++|+
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~----------~~~p-~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEE----------FAGP-LWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSB----------SSCC-CCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred EEEEEECCCCceeeccccccc----------ccCc-cccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCCCcEEEec
Confidence 799999877765555432211 0001 1222234567778887 6666666 8889999999999999887
Q ss_pred CCCCCceeeEE-eecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcce-eeeeccc
Q 004141 430 PAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-IMKIPVK 507 (771)
Q Consensus 430 ~~~~~~~~~~~-s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~ 507 (771)
..... ...+ +++++.+++++++.+.|..+|+.++.+++ . ..++....+ .+ ....+. ...
T Consensus 333 ~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~-~~l~~~~~~--~~--------~~~~~~~~~~---- 393 (662)
T 3azo_A 333 GPWTE--WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR--A-RTIGARHTD--PV--------DPAYYPEPQI---- 393 (662)
T ss_dssp SSCCE--EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC--E-EEEESCCCC--SS--------CGGGSCCCEE----
T ss_pred CCCCe--EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc--e-EEeecCCcc--cC--------CccccCcceE----
Confidence 66542 2344 88999999999999999999999876543 1 111111000 01 111110 111
Q ss_pred CcccccccCCCceEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChh
Q 004141 508 GVSANLTKGAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEE 583 (771)
Q Consensus 508 ~~~~~~~~~~g~~l~~~~~~P~~~~----~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~ 583 (771)
..+...+|..++++++.|++.. ..++.|+||++||+++......|...++.|+++||.|+++|+||++++|.+
T Consensus 394 ---~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 394 ---RTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp ---EEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ---EEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 1334457889999999998653 456789999999998776556788889999999999999999999999999
Q ss_pred hhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc-CCCC
Q 004141 584 ALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTDI 662 (771)
Q Consensus 584 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-~~~~ 662 (771)
+.......++..+++|+.++++++++++.++++||+|+||||||++++.++.+ |++|+++|+.+|+.++..+.. ....
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 549 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHD 549 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCG
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccc
Confidence 98776677777789999999999999988899999999999999999998886 999999999999998766543 1111
Q ss_pred CcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004141 663 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
....+... +.... .+..+.+...+|+..+.++++|+|++||++|.+||++++++++++|+..|++++++++
T Consensus 550 ~~~~~~~~--------~~~~~-~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 620 (662)
T 3azo_A 550 FESRYLDF--------LIGSF-EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSF 620 (662)
T ss_dssp GGTTHHHH--------HTCCT-TTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEE
T ss_pred hhhHhHHH--------HhCCC-ccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 00011111 11111 2455677788999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 743 PNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 743 ~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++++|++...+...+++..+.+||.++|+
T Consensus 621 ~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 649 (662)
T 3azo_A 621 EGEGHGFRRKETMVRALEAELSLYAQVFG 649 (662)
T ss_dssp TTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence 99999987666667889999999999875
No 3
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=8.1e-53 Score=481.14 Aligned_cols=560 Identities=16% Similarity=0.214 Sum_probs=408.7
Q ss_pred HHHHHHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceE
Q 004141 24 YASLSKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA 103 (771)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~ 103 (771)
+.+..+.++++...|-. ...+ |+||++|+|..... ....||. + .+++.+++|... ...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~----~~DG~~la~~s~~~------g~~~lw~--~--~~g~~~~lt~~~----~~~~~~ 69 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKY-SLQG----VVDGDKLLVVGFSE------GSVNAYL--Y--DGGETVKLNREP----INSVLD 69 (582)
T ss_dssp HHHHHHHHHHHHHSCEE-EEEE----EETTTEEEEEEEET------TEEEEEE--E--ETTEEEECCSSC----CSEECE
T ss_pred HHHHHHHHHHHhccchh-eeec----CCCCCeEEEEEccC------CceeEEE--E--cCCCcEeeeccc----cccccc
Confidence 45555566777666632 2222 45999999987532 3456776 4 344667776543 125778
Q ss_pred EEeCCCCCeEEEEecCC--CCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 104 VVPSPSGSKLLVVRNPE--NESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
|+|||| +++|.+... .....+|.+.. .+...+++... .. ...+|||||+.++|++...
T Consensus 70 ~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~-~~----------~~~~~s~dg~~~~~~s~~~----- 131 (582)
T 3o4h_A 70 PHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM----------RILSGVDTGEAVVFTGATE----- 131 (582)
T ss_dssp ECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSC-SB----------EEEEEEECSSCEEEEEECS-----
T ss_pred ccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCCC-Cc----------eeeeeCCCCCeEEEEecCC-----
Confidence 999999 677877652 23345666664 55544332221 22 3679999999999986432
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
..+.+||+++++.+++. .... .+++|||||+. |+
T Consensus 132 --------------------------------------~~~~l~d~~~g~~~~l~--~~~~--~~~~~spDG~~----la 165 (582)
T 3o4h_A 132 --------------------------------------DRVALYALDGGGLRELA--RLPG--FGFVSDIRGDL----IA 165 (582)
T ss_dssp --------------------------------------SCEEEEEEETTEEEEEE--EESS--CEEEEEEETTE----EE
T ss_pred --------------------------------------CCceEEEccCCcEEEee--cCCC--ceEEECCCCCE----EE
Confidence 23447899999988883 3222 78999999999 99
Q ss_pred EEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCC
Q 004141 260 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 339 (771)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~ 339 (771)
+.+...+. ...||++|+ ++++.++|+.+.+.+.+|+|||||++|+ .+...
T Consensus 166 ~~~~~~~~-----------~~~i~~~d~-----------------~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~- 215 (582)
T 3o4h_A 166 GLGFFGGG-----------RVSLFTSNL-----------------SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETA- 215 (582)
T ss_dssp EEEEEETT-----------EEEEEEEET-----------------TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECS-
T ss_pred EEEEcCCC-----------CeEEEEEcC-----------------CCCCceEeecCCCccccceECCCCCEEE-EccCC-
Confidence 98753321 136999998 8888999998888899999999999998 43332
Q ss_pred CCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc--------cccCCCEEEEEeeeCC
Q 004141 340 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP--------WLSDGCTMLLSSIWGS 411 (771)
Q Consensus 340 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~--------~s~Dg~~l~~~~~~~~ 411 (771)
| ..+|+++|+++++.+ ++..... .+..+. ||||| .++++...++
T Consensus 216 ---~----~~~i~~~d~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~spdg-~~~~~~~~~g 267 (582)
T 3o4h_A 216 ---R----EARLVTVDPRDGSVE-DLELPSK-------------------DFSSYRPTAITWLGYLPDG-RLAVVARREG 267 (582)
T ss_dssp ---S----CEEEEEECTTTCCEE-ECCCSCS-------------------HHHHHCCSEEEEEEECTTS-CEEEEEEETT
T ss_pred ---C----eeEEEEEcCCCCcEE-EccCCCc-------------------ChhhhhhccccceeEcCCC-cEEEEEEcCC
Confidence 1 357999999887764 2222100 112334 99999 6888888888
Q ss_pred eeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhh
Q 004141 412 SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVK 491 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (771)
...||.+ |+..+.. .+.+....|+ ++ .++++.++..+|+++|+.+..+ + + ..+ .+++...
T Consensus 268 ~~~l~~~----g~~~~~~--~~~v~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~----~--~~l-----~~~~~~~ 327 (582)
T 3o4h_A 268 RSAVFID----GERVEAP--QGNHGRVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-P----L--LEG-----GLPEDLR 327 (582)
T ss_dssp EEEEEET----TEEECCC--SSEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC-E----E--ECC-----CCCHHHH
T ss_pred cEEEEEE----CCeeccC--CCceEEEEec-CC-EEEEEEcCCCCCCeEEEEcCCC-c----e--EEE-----ecCCccc
Confidence 8888876 6555422 2334456677 55 5567788889999999987543 1 1 111 1111000
Q ss_pred hccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEE
Q 004141 492 SLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLI 571 (771)
Q Consensus 492 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~ 571 (771)
... ..... ..+...+|.+++++++.|++.. .+.|+||++||+++......|...++.|+++||.|++
T Consensus 328 --~~~--~~~~~-------~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~ 394 (582)
T 3o4h_A 328 --RSI--AGSRL-------VWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVM 394 (582)
T ss_dssp --HTE--EEEEE-------EEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEE
T ss_pred --ccc--CcceE-------EEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEE
Confidence 000 01111 2445567889999999998643 3789999999988776666788899999999999999
Q ss_pred ECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 572 VNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 572 ~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
+|+||++++|.++.......++...++|+.++++++.+++.++ +++|+|||+||++++.++.++|++++++|+.+|+.
T Consensus 395 ~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 472 (582)
T 3o4h_A 395 PNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV 472 (582)
T ss_dssp ECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCC
T ss_pred eccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCcc
Confidence 9999999999998877777777788999999999999987666 99999999999999999999999999999999999
Q ss_pred chhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHH
Q 004141 652 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALR 731 (771)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~ 731 (771)
++..+....+.....+.+.+ .+ ...+.+...+|...+.++++|+|++||++|.++|++++++++++++
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~ 540 (582)
T 3o4h_A 473 DWEEMYELSDAAFRNFIEQL--------TG----GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELL 540 (582)
T ss_dssp CHHHHHHTCCHHHHHHHHHH--------TT----TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred CHHHHhhcccchhHHHHHHH--------cC----cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHH
Confidence 88766544332110011111 11 3456678889999999999999999999999999999999999999
Q ss_pred hCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 732 EKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 732 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
..|++++++++|+++|.+..++...++++.+.+||+++|+
T Consensus 541 ~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 541 ARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp HTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988666677899999999999985
No 4
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=6e-51 Score=476.05 Aligned_cols=592 Identities=13% Similarity=0.132 Sum_probs=416.0
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Cccc-cccceEEEeCCCCCeEEEEecCCCC-CCeE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPVE-MTGASAVVPSPSGSKLLVVRNPENE-SPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~~-~~~~~~~~~SPdG~~la~~~~~~~~-~~~~ 126 (771)
++||++++|.....+ .....||+.+. .+++.+.|.... +... ......++|||||++|||.+...+. ..++
T Consensus 80 ~~dG~~~~~~~~~~~----~~~~~l~~~~~--~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGL----QNQRVLYVQDS--LEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTI 153 (710)
T ss_dssp EEETTEEEEEEECSS----CSSCEEEEESS--TTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEE
T ss_pred EEECCEEEEEEEcCC----ceEEEEEEEcC--CCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEE
Confidence 369999999986432 34557888654 233444343221 1110 0136789999999999999886532 2377
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004141 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
++++ .+++..+.+...... ..++|||||+.|+|.+........ .
T Consensus 154 ~v~d~~tg~~~~~~~~~~~~----------~~~~wspDg~~l~~~~~~~~~~~~--------~----------------- 198 (710)
T 2xdw_A 154 KFMKVDGAKELPDVLERVKF----------SCMAWTHDGKGMFYNAYPQQDGKS--------D----------------- 198 (710)
T ss_dssp EEEETTTTEEEEEEEEEECS----------CCEEECTTSSEEEEEECCCCSSCC--------S-----------------
T ss_pred EEEECCCCCCCcccccCccc----------ceEEEEeCCCEEEEEEECCccccc--------c-----------------
Confidence 7777 566655543322122 589999999999999865431100 0
Q ss_pred CCcCcccCCccCceEEEEEccCCcee--ec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004141 206 EDWGETYAGKRQPSLFVININSGEVQ--AV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~--~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
+..-.......||++++.+++.. .+ ...........+.|||||+. |++.+..... ...+|
T Consensus 199 ---~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~~----------~~~~l 261 (710)
T 2xdw_A 199 ---GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY----VLLSIREGCD----------PVNRL 261 (710)
T ss_dssp ---SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECSSS----------SCCEE
T ss_pred ---ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE----EEEEEEccCC----------CccEE
Confidence 00000113468999999888632 22 11111233568899999999 9998753211 13589
Q ss_pred EEEecccccchhhhhhhhcCCCCC------C--cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004141 283 YAVRVSLYKSEASELELKESSSED------L--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~------~--~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
|++|+ .+ + ..++|+....... ..|+|||++|+|.++.. ....+|+++
T Consensus 262 ~~~d~-----------------~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~-------~~~~~l~~~ 316 (710)
T 2xdw_A 262 WYCDL-----------------QQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH-------SPNYRLINI 316 (710)
T ss_dssp EEEEG-----------------GGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT-------CTTCEEEEE
T ss_pred EEEEC-----------------cccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC-------CCCCEEEEE
Confidence 99998 43 3 4677776554443 46999999999998764 235689999
Q ss_pred ecCCCCC---CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecC
Q 004141 355 DWPTNGN---FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITP 430 (771)
Q Consensus 355 d~~~~~~---~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~ 430 (771)
|+.+++. +.++.... . ..+..+.|+++ ..|+++...++..+|+.+++.+|+ ++.|..
T Consensus 317 d~~~~~~~~~~~l~~~~~-----------~-------~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~ 377 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHE-----------K-------DVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATGALLKIFPL 377 (710)
T ss_dssp ETTSCCGGGCEEEECCCS-----------S-------CEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTCCEEEEECC
T ss_pred eCCCCCcccceeccCCCC-----------C-------CeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCCCEEEecCC
Confidence 9887642 12211110 0 01234678854 568888888888999999996665 577776
Q ss_pred CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcc
Q 004141 431 AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVS 510 (771)
Q Consensus 431 ~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 510 (771)
..+.+....++++++.+++..++.++|.++|++++.+++. ....++.. ++..++ ...+....+
T Consensus 378 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~-~~~~l~~~--~~~~~~--------~~~~~~~~~------ 440 (710)
T 2xdw_A 378 EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL-EPRVFREV--TVKGID--------ASDYQTVQI------ 440 (710)
T ss_dssp CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC-CCEEEEEC--CCTTCC--------GGGEEEEEE------
T ss_pred CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCcc-ceEEeeec--ccCCcC--------ccccEEEEE------
Confidence 5443444567789999999999999999999999865431 01111111 111122 111222222
Q ss_pred cccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCC
Q 004141 511 ANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 511 ~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
.+...+|.+++++++.|++....++.|+||++||+++......|......|++ +||+|+++|+||++++|..|.....
T Consensus 441 -~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~ 519 (710)
T 2xdw_A 441 -FYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGI 519 (710)
T ss_dssp -EEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTS
T ss_pred -EEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhh
Confidence 44566789999999999876566789999999999877666667776677777 9999999999999999998877655
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004141 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
.......++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ..
T Consensus 520 ~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~ 597 (710)
T 2xdw_A 520 LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW--TT 597 (710)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HH
T ss_pred hhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhH--HH
Confidence 5556667899999999999998889999999999999999999999999999999999999887655432211112 12
Q ss_pred hccCCCCccCCCCCChhhHHHHhhcCcccccC-----CCCC-cEEEEeeCCCCccCcHHHHHHHHHHHhC-------CCC
Q 004141 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHIS-----KVKT-PTIFLLGAQDLRVPVSNGLQYARALREK-------GVE 736 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~i~~-P~lii~G~~D~~vp~~~~~~~~~~l~~~-------g~~ 736 (771)
.++. ....+....+...+|+.++. ++++ |+||+||++|.+||+.++.+++++|+.. |.+
T Consensus 598 ~~g~--------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 598 DYGC--------SDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp HHCC--------TTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSC
T ss_pred hCCC--------CCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcC
Confidence 2221 12245556677889999988 7886 9999999999999999999999999988 889
Q ss_pred EEEEEeCCCCccCCCCC-ChHHHHHHHHHHHHHhhC
Q 004141 737 TKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~L~ 771 (771)
+++++++++||++..+. ...+.+..+.+||.++|+
T Consensus 670 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 670 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp EEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999987643 345788899999999874
No 5
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=3.8e-53 Score=497.27 Aligned_cols=616 Identities=16% Similarity=0.170 Sum_probs=414.8
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.+..||||++|+|........+......++++++.+. +.++++... .....+..++|||||++|||+++. +
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~--~~~~~~~~~~~SPdG~~la~~~~~-----~ 135 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPE--VSNAKLQYAGWGPKGQQLIFIFEN-----N 135 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTT--CCSCCCSBCCBCSSTTCEEEEETT-----E
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCC--ceEeccCCc--cccccccccEECCCCCEEEEEECC-----e
Confidence 4556889999999876443333334578889887443 334454322 111226679999999999999863 4
Q ss_pred EEEEe-cCCcceEEEecCCc-c-----cccccCCC---cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004141 126 QFELW-SQSQLEKEFHVPQT-V-----HGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~-~-----~g~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
+++++ .+++.++++..... . .+.+|.++ ....++|||||++|+|.+.+.... ..+........ .
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~-~~~~~~~~~~~-----~ 209 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV-PIMELPTYTGS-----I 209 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS-CEEEECCCSSS-----S
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCcc-ceEEeeccCCc-----C
Confidence 77777 66677777654211 1 11111111 124799999999999998654321 11111100000 0
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCC------CCccceEEEecCCCCCccEEEEEeecCcce
Q 004141 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPK------SLSVGQVVWAPLNEGLHQYLVFVGWSSETR 268 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~------~~~~~~~~wspDg~~~~~~l~~~~~~~~~~ 268 (771)
......+.|.+++ .. .....|++||+.+++. +.+. .. ...+..++|||||+. |++.+.+..
T Consensus 210 ~~~~~~~~~~~~G-~~---~~~~~l~~~d~~~~~~~~~l~--~~~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~-- 277 (723)
T 1xfd_A 210 YPTVKPYHYPKAG-SE---NPSISLHVIGLNGPTHDLEMM--PPDDPRMREYYITMVKWATSTKV----AVTWLNRAQ-- 277 (723)
T ss_dssp SCCCEEEECCBTT-SC---CCEEEEEEEESSSSCCCEECC--CCCCGGGSSEEEEEEEESSSSEE----EEEEEETTS--
T ss_pred CCcceeccCCCCC-CC---CCeeEEEEEECCCCceeEEee--CCccCCCccceeEEEEEeCCCeE----EEEEEcCCC--
Confidence 0111233344432 21 2345899999999884 6662 22 345678999999997 877654322
Q ss_pred eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC--Cccc----cceeecCCCCEEEEE-ecCCCCC
Q 004141 269 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSA----FFPRFSPDGKFLVFL-SAKSSVD 341 (771)
Q Consensus 269 ~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~--~~~~----~~p~~SpDG~~l~f~-~~~~~~~ 341 (771)
....|+++|+ .+++..++... ...+ ..|+|||||++|+|. +..+
T Consensus 278 ---------~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--- 328 (723)
T 1xfd_A 278 ---------NVSILTLCDA-----------------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--- 328 (723)
T ss_dssp ---------CEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC---
T ss_pred ---------CeEEEEEEeC-----------------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc---
Confidence 2247999998 77776655322 1222 489999999999998 4433
Q ss_pred CCCccccccceeee-cCCCC---CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC--CeeEE
Q 004141 342 SGAHSATDSLHRID-WPTNG---NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG--SSQVI 415 (771)
Q Consensus 342 ~g~~~~~~~l~~~d-~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~--~~~~l 415 (771)
|.+....+||++| ..++. .+.++.+...+ ...++|||||+.|+|.+..+ +..+|
T Consensus 329 -~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-------------------~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 329 -GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV-------------------TKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp -SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE-------------------EEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred -CCCcceeEEEEEeccCCCCccceeEeecCCeEE-------------------EeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 3223356899999 46655 45554322111 11257999999999888765 67889
Q ss_pred EEEECCCC-cEEEecCC---CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhh
Q 004141 416 ISVNVSSG-ELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVK 491 (771)
Q Consensus 416 ~~~d~~tg-~~~~l~~~---~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (771)
|.++..++ +.+.|+.. ...+....||+||+.+++.+++++.|..+++ +...+ .++.+ + +.+..+.
T Consensus 389 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~---~~~~~--~-----~~~~~~~ 457 (723)
T 1xfd_A 389 YSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDK---KKMFD--L-----ETNEHVK 457 (723)
T ss_dssp EEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTC---CEEEE--E-----ECCHHHH
T ss_pred EEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCC---CEEEE--e-----ccChhhh
Confidence 99998765 45666642 3345567899999999999999999987665 43222 22211 1 1122222
Q ss_pred hccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CC--cchHHHHHHHHCCcE
Q 004141 492 SLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LS--SYSKSLAFLSSVGYS 568 (771)
Q Consensus 492 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~--~~~~~~~~la~~G~~ 568 (771)
..+....+. +.+. +.+...+| +++++++.|+++...+++|+||++||+++... .. .+......|+++||.
T Consensus 458 ~~~~~~~~~----~~~~--~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~ 530 (723)
T 1xfd_A 458 KAINDRQMP----KVEY--RDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAV 530 (723)
T ss_dssp HHHHTSCCC----BCCB--CCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCE
T ss_pred hhhhhccCC----CceE--EEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEE
Confidence 222222221 1111 23445567 99999999997666788999999999887632 22 233556677789999
Q ss_pred EEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC----CCceeEE
Q 004141 569 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAA 644 (771)
Q Consensus 569 Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~~~ 644 (771)
|+++|+||++++|..+.......++...++|+.++++++.+++.+|++||+|+||||||++++.++.++ |++++++
T Consensus 531 vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~ 610 (723)
T 1xfd_A 531 VVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCG 610 (723)
T ss_dssp EECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEE
T ss_pred EEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEE
Confidence 999999999888887766556666667799999999999888778899999999999999999999999 9999999
Q ss_pred EecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCC-CcEEEEeeCCCCccCcHHH
Q 004141 645 AARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 645 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~lii~G~~D~~vp~~~~ 723 (771)
|+.+|+.++..+ ...+.+.+.. .+. .....+...++...+.+++ +|+||+||++|.++|++++
T Consensus 611 v~~~~~~~~~~~-------~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~ 674 (723)
T 1xfd_A 611 SALSPITDFKLY-------ASAFSERYLG--------LHG-LDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHT 674 (723)
T ss_dssp EEESCCCCTTSS-------BHHHHHHHHC--------CCS-SCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHH
T ss_pred EEccCCcchHHh-------hhhccHhhcC--------Ccc-CChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHH
Confidence 999998765422 1111111100 010 1112344556777888999 7999999999999999999
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++++++|+.++++++++++|+++|.+...+...+++..+.+||+++|+
T Consensus 675 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 675 AELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999986556667889999999999875
No 6
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.7e-50 Score=470.81 Aligned_cols=586 Identities=13% Similarity=0.135 Sum_probs=415.0
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Ccc-ccccceEEEeCCCCCeEEEEecCCC-CCC
Q 004141 48 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPV-EMTGASAVVPSPSGSKLLVVRNPEN-ESP 124 (771)
Q Consensus 48 ~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~-~~~~~~~~~~SPdG~~la~~~~~~~-~~~ 124 (771)
..++||++++|.+.... .....||+.+. .+++.++|+... +.. .......++|||||++|||.....+ +..
T Consensus 74 ~p~~dG~~~~~~~~~~~----~~~~~l~~~~~--~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKD----KEKAILYWRQG--ESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp CCEEETTEEEEEEECTT----CSSCEEEEEES--TTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCC
T ss_pred CCEEECCEEEEEEEcCC----CeEEEEEEEcC--CCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceE
Confidence 34479999999886532 33567888664 344566666532 100 0124678999999999999988653 346
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004141 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.+++++ .+++..+....... .+..++|||||+.|+|.+.+......
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~---------~~~~~~wspDg~~l~~~~~d~~~~~~------------------------ 194 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGG---------KYATPKWTPDSKGFYYEWLPTDPSIK------------------------ 194 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCC---------TTCCCEECTTSSEEEEEECCCCTTSC------------------------
T ss_pred EEEEEECCCCCCcCCcccCcc---------cccceEEecCCCEEEEEEecCCCCCc------------------------
Confidence 777777 55543211111111 12589999999999999765421100
Q ss_pred ccCCcCcccCCccCceEEEEEccCCce--eeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004141 204 WEEDWGETYAGKRQPSLFVININSGEV--QAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
.-......+||++++.+++. +.+...+ .......+.|||||+. |++.++... ...
T Consensus 195 -------~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~-----------~~~ 252 (695)
T 2bkl_A 195 -------VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY----LFVYILRGW-----------SEN 252 (695)
T ss_dssp -------GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC----EEEEEEETT-----------TEE
T ss_pred -------cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE----EEEEEeCCC-----------Cce
Confidence 00011346899999998873 3331112 2235668899999999 999875431 223
Q ss_pred eeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 281 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+||+++. .+++.++|+........+.| |||+ |+|.++.+ ....+|+++|+.+++
T Consensus 253 ~l~~~~~-----------------~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~-------~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 253 DVYWKRP-----------------GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEG-------APRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECT-----------------TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTT-------CTTCEEEEEBTTBCS
T ss_pred EEEEEcC-----------------CCCceEEeecCCCceEEEEe-cCCc-EEEEECCC-------CCCCEEEEEeCCCCC
Confidence 7999986 66778888877766777877 7888 88887653 235689999987765
Q ss_pred C---CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCce
Q 004141 361 N---FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFS 436 (771)
Q Consensus 361 ~---~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~ 436 (771)
. +.+.... .. ..+..++|+ +..|+++...++..+||.++++++..+.+... .+.+.
T Consensus 307 ~~~~~~l~~~~-----------~~-------~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~ 366 (695)
T 2bkl_A 307 RASWKEIVPED-----------SS-------ASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAAS 366 (695)
T ss_dssp GGGCEEEECCC-----------SS-------CEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEEC
T ss_pred ccCCeEEecCC-----------CC-------CeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEE
Confidence 3 1221110 00 012345666 44688888888999999999876667777644 33334
Q ss_pred eeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccccccC
Q 004141 437 WSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKG 516 (771)
Q Consensus 437 ~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 516 (771)
...++++++.+++..++.++|.++|+.++.+++ .+ .++... . .++ ...+....+ .+...
T Consensus 367 ~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~--~~-~l~~~~--~-~~~--------~~~~~~~~~-------~~~~~ 425 (695)
T 2bkl_A 367 NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK--SE-LWAKVD--V-PMN--------PEQYQVEQV-------FYASK 425 (695)
T ss_dssp CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC--EE-EEEECC--C-SSC--------GGGEEEEEE-------EEECT
T ss_pred EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc--EE-EEecCC--C-CCC--------HHHCeEEEE-------EEECC
Confidence 456778999999999999999999999986553 11 111111 0 111 111222222 34566
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.+++++++.|++....++.|+||++|||++......|......|+++||+|+++|+||++++|..|............
T Consensus 426 dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~ 505 (695)
T 2bkl_A 426 DGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNV 505 (695)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHH
T ss_pred CCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCc
Confidence 78999999999987656678999999999887765556766677788999999999999999999998766555555667
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+...... ......++.
T Consensus 506 ~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~--~~~~~~~g~--- 580 (695)
T 2bkl_A 506 FDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSG--RTWIPEYGT--- 580 (695)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG--GGGHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCC--cchHHHhCC---
Confidence 899999999999998889999999999999999999999999999999999999887654332211 111122221
Q ss_pred ccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEeeCCCCccCcHHHHHHHHHHHh---CCCCEEEEEeCCCCccCCC
Q 004141 677 DSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~lii~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~ 751 (771)
....+....+...+|+.++.+++ +|+||+||++|.+||+.++.+++++|+. .|.++++++++++||++..
T Consensus 581 -----~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 655 (695)
T 2bkl_A 581 -----AEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGAD 655 (695)
T ss_dssp -----TTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCS
T ss_pred -----CCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCC
Confidence 11234556677889999998876 7999999999999999999999999998 6789999999999999854
Q ss_pred C-CChHHHHHHHHHHHHHhhC
Q 004141 752 P-QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ~-~~~~~~~~~i~~fl~~~L~ 771 (771)
+ ....+.+..+++||.++|+
T Consensus 656 ~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 656 QVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHcC
Confidence 3 3345678889999999874
No 7
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.1e-50 Score=477.79 Aligned_cols=598 Identities=18% Similarity=0.228 Sum_probs=411.0
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCC
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.+..||||++|+|... ..||++++.+.. ...++++... ..+..++|||||++|||+++.
T Consensus 113 ~~~~SpDg~~l~~~~~----------~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SPDG~~la~~~~~----- 172 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG----------GELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSPKGGFVSFIRGR----- 172 (741)
T ss_dssp CCEECTTSSEEEEEET----------TEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECTTSSEEEEEETT-----
T ss_pred eeEECCCCCEEEEEeC----------CcEEEEECCCCCcceEEEcccCC-----cccccccCCCCCCEEEEEeCC-----
Confidence 4456889999999864 478888874331 0445554443 457889999999999999753
Q ss_pred eEEEEe-cCCcceEEEecCCc-c----cccccCC--CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCC
Q 004141 125 IQFELW-SQSQLEKEFHVPQT-V----HGSVYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 196 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~-~----~g~~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (771)
++++++ .+++..+++..... + ...++.+ +....++|||||++|+|.+.+..... .+... ..... .
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~-~~~~~-----~~~p~-~ 245 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP-VQKRY-----EVYAD-R 245 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC-EEEEE-----EECSS-C
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc-eEecC-----CCCCC-c
Confidence 477777 55555554432211 0 0000000 01257999999999999876542211 00000 00000 0
Q ss_pred CCCCcccccCCcCcccCCccCceEEEEEccC-CceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004141 197 SWKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 197 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
.....+.|... |+ ......|+++|+++ ++.+.+... .....+..++| |||+. |++.+....
T Consensus 246 ~~~~~~~~~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~----l~~~~~~~~-------- 308 (741)
T 2ecf_A 246 TDVIEQRYPAA-GD---ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH----LSFQRQSRD-------- 308 (741)
T ss_dssp EEEEEEECCBT-TS---CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE----EEEEEEETT--------
T ss_pred ccceEeecCCC-CC---CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE----EEEEEeccc--------
Confidence 00001111111 11 11235899999999 988777311 23446778999 99999 998874221
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc-----cccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004141 275 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-----~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
.....|+++|+ .+++.+.+..... .+..+.|||||+ ++|.+..+ | ..
T Consensus 309 --~~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~----g----~~ 360 (741)
T 2ecf_A 309 --QKKLDLVEVTL-----------------ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT----G----FQ 360 (741)
T ss_dssp --SSEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT----S----SC
T ss_pred --CCeEEEEEEEC-----------------CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC----C----cc
Confidence 12348999998 7777666543322 346899999999 66766553 2 46
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCC-ccccCCCEEEEEeeeCC--eeEEEEEECCCCcEE
Q 004141 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN-PWLSDGCTMLLSSIWGS--SQVIISVNVSSGELL 426 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~-~~s~Dg~~l~~~~~~~~--~~~l~~~d~~tg~~~ 426 (771)
+||.+|+.++ .+.++..... +..+ .|||||+.|++.+..++ ..+||.++.+++..+
T Consensus 361 ~l~~~~~~~~-~~~l~~~~~~--------------------v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 361 HLYRIDSKGK-AAALTHGNWS--------------------VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EEEEECSSSC-EEESCCSSSC--------------------EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EEEEEcCCCC-eeeeeecceE--------------------EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 7999987655 4444332211 2233 59999999998887665 678999998777788
Q ss_pred EecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhh-ccccC--cc-eee
Q 004141 427 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKS-LLSSR--QF-SIM 502 (771)
Q Consensus 427 ~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~-~~~ 502 (771)
+|+... ......||+||+.|++..+++..|+++++.+...+. +. .+. ..+..+.. .+... .+ ...
T Consensus 420 ~l~~~~-~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~----~~--~l~----~~~~~~~~~~~~~~~~~~~~~~ 488 (741)
T 2ecf_A 420 RLSKAP-GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK----IA--TLV----ENDLADPKHPYARYREAQRPVE 488 (741)
T ss_dssp ECCCSC-SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE----EE--CSS----CCCSSSTTSTTHHHHTTCCCEE
T ss_pred ecccCC-CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe----EE--Eec----cCcccccccchhhhhccCCCcE
Confidence 888733 345678999999999999999999999998864321 11 111 11100000 01111 11 111
Q ss_pred eecccCcccccccCCC-ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-Ccch-----HHHHHHHHCCcEEEEECCC
Q 004141 503 KIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 503 ~~~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~-----~~~~~la~~G~~Vv~~d~r 575 (771)
.+ .+...+| .+++++++.|++....++.|+||++||++..... ..|. ..++.|+++||.|+++|+|
T Consensus 489 ~~-------~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 561 (741)
T 2ecf_A 489 FG-------TLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNR 561 (741)
T ss_dssp EE-------EEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCT
T ss_pred EE-------EEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecC
Confidence 12 3445678 8999999999876556778999999998876421 2343 5788899999999999999
Q ss_pred CCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh
Q 004141 576 GSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 576 G~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 655 (771)
|.++++..+.......++...++|+.++++++.+++.++.++|+|+||||||++++.++.++|++++++|+.+|+.++..
T Consensus 562 G~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 562 GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL 641 (741)
T ss_dssp TCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh
Confidence 99888887776666667777799999999999998778889999999999999999999999999999999999877542
Q ss_pred hhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004141 656 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
+. ..+.+.+ ...+ ......+...+|...+.++++|+|++||++|.++|++++++++++++..++
T Consensus 642 ~~-------~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 705 (741)
T 2ecf_A 642 YD-------SHYTERY--------MDLP-ARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQ 705 (741)
T ss_dssp SB-------HHHHHHH--------HCCT-GGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred hc-------cccchhh--------cCCc-ccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCC
Confidence 21 0111111 1111 234556667889999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+++++++++++|.+..... .++++.+.+||+++|+
T Consensus 706 ~~~~~~~~~~~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 706 PFELMTYPGAKHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp CCEEEEETTCCSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 9999999999999874433 6788999999999986
No 8
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=475.36 Aligned_cols=607 Identities=14% Similarity=0.145 Sum_probs=405.4
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc---cceeecCCccccccceEEEeCCCCCeEEEEecCCC
Q 004141 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS---VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN 121 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~ 121 (771)
..+..||||++|+|.......-+......++++++.++ +. .+++ ..+..++|||||++|||+++.
T Consensus 63 ~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l~--------~~~~~~~~SPDG~~la~~~~~-- 130 (719)
T 1z68_A 63 SNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNELP--------RPIQYLCWSPVGSKLAYVYQN-- 130 (719)
T ss_dssp SEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCCC--------SSBCCEEECSSTTCEEEEETT--
T ss_pred eeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--ccccceecC--------cccccceECCCCCEEEEEECC--
Confidence 34566899999999876432111123468888886433 33 3332 246789999999999999753
Q ss_pred CCCeEEEEe-cCCcceEEEecCCc------ccccccCCC---cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCC
Q 004141 122 ESPIQFELW-SQSQLEKEFHVPQT------VHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSS 191 (771)
Q Consensus 122 ~~~~~~~~~-~~~~~~~~~~~~~~------~~g~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~ 191 (771)
.++..+ .++...+++..... ....+|.++ ....++|||||++|||.+.+..... .+........
T Consensus 131 ---~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~-~~~~~~~~~~-- 204 (719)
T 1z68_A 131 ---NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP-VIAYSYYGDE-- 204 (719)
T ss_dssp ---EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC-EEEEEECCSS--
T ss_pred ---eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc-eEEeeccCCC--
Confidence 466665 45555555432110 001111111 1148999999999999886532211 1110000000
Q ss_pred CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee---eccC----CCCCCccceEEEecCCCCCccEEEEEeec
Q 004141 192 DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKG----IPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 192 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~---~l~~----~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
.......+.|... |. ......|++||+++++.. .+.. ......+..++|||||+ ++|+...
T Consensus 205 ---~~~~~~~~~yp~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-----~~~~~~~ 272 (719)
T 1z68_A 205 ---QYPRTINIPYPKA-GA---KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-----VCLQWLK 272 (719)
T ss_dssp ---SSCEEEEEECCBT-TS---CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-----EEEEEEE
T ss_pred ---CCccceeecCCCC-CC---CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-----EEEEEec
Confidence 0000011122111 11 113358999999998753 4410 11334567899999965 6665321
Q ss_pred CcceeeeeeeeccCCceeEEEe----cccccchhhhhhhhcCCCCCCcceecC-----CCCcccc-----ceeecCCCCE
Q 004141 265 SETRKLGIKYCYNRPCALYAVR----VSLYKSEASELELKESSSEDLPVVNLT-----ESISSAF-----FPRFSPDGKF 330 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~lt-----~~~~~~~-----~p~~SpDG~~ 330 (771)
.. .....||++| + .+++.+.++ .+...+. .|.|||||+.
T Consensus 273 ~~----------~~~~~l~~~d~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 273 RV----------QNVSVLSICDFREDW-----------------QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp SS----------TTEEEEEEEEECSSS-----------------SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred cc----------cCeEEEEEEcccCCC-----------------CCCceEEEEecccccCCceEccccCCccEECCCCCe
Confidence 11 1223799999 6 667766666 2333344 8999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 409 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~- 409 (771)
|+|..... .+..+|+++|+.+++.++++..... +..+.++ ||+.|+|.+..
T Consensus 326 l~~~~~~~-------~g~~~l~~~~~~~~~~~~lt~~~~~--------------------v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 326 YYKIFSDK-------DGYKHIHYIKDTVENAIQITSGKWE--------------------AINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp EEEEEECT-------TSCEEEEEESSCSTTCEECSCSSSC--------------------EEEEEEE-CSSEEEEEESCG
T ss_pred EEEEEEcc-------CCceEEEEEECCCCceEecccCceE--------------------EEEEEEE-eCCEEEEEEecC
Confidence 99965543 1246799999988776555543211 1123455 89999998876
Q ss_pred ---CCeeEEEEEECCCC--cEEEecCC----CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccC
Q 004141 410 ---GSSQVIISVNVSSG--ELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVS 480 (771)
Q Consensus 410 ---~~~~~l~~~d~~tg--~~~~l~~~----~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 480 (771)
.+..+||.+++++| +.++++.. ...+....|++|++.+++.+++++.| .+++.++.+++ .+.
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~---~~~----- 448 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQ---EIK----- 448 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCC---EEE-----
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCC---EEE-----
Confidence 56789999998777 46777642 22345678999999999999999887 57777765442 111
Q ss_pred CCCCCCchhhhhccccCcc-eeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcch-H
Q 004141 481 SPISRCPEKVKSLLSSRQF-SIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-K 557 (771)
Q Consensus 481 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~-~ 557 (771)
+.+.++.+...+....+ ....+ ++...+ .+++++++.|+++...++.|+||++||++.... ...|. .
T Consensus 449 --~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~ 518 (719)
T 1z68_A 449 --ILEENKELENALKNIQLPKEEIK-------KLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVN 518 (719)
T ss_dssp --EEECCHHHHHHTTSBCCCEEEEE-------EEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCC
T ss_pred --EeecchhhhhhhccccCCceEEE-------EEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhh
Confidence 11223333222333222 11112 233344 889999999987666778999999999887643 22332 2
Q ss_pred HHHHH-HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhh
Q 004141 558 SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 636 (771)
Q Consensus 558 ~~~~l-a~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~ 636 (771)
....| +++||.|+++|+||+++++..+.......++...++|+.++++++.+++.+|++||+|+||||||++++.++.+
T Consensus 519 ~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 598 (719)
T 1z68_A 519 WISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALAS 598 (719)
T ss_dssp HHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTT
T ss_pred HHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHh
Confidence 34444 47999999999999999888877666667777789999999999999877889999999999999999999999
Q ss_pred CCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCC-hhhHHHHhhcCcccccCCCCC-cEEEEeeCC
Q 004141 637 APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-VEDLTRFHSKSPISHISKVKT-PTIFLLGAQ 714 (771)
Q Consensus 637 ~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~-P~lii~G~~ 714 (771)
+|++++++|+.+|+.++..+. ..+.+.+ .+.+. .+....+...+|...+.++++ |+|++||++
T Consensus 599 ~p~~~~~~v~~~~~~~~~~~~-------~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~ 663 (719)
T 1z68_A 599 GTGLFKCGIAVAPVSSWEYYA-------SVYTERF--------MGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTA 663 (719)
T ss_dssp SSSCCSEEEEESCCCCTTTSB-------HHHHHHH--------HCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETT
T ss_pred CCCceEEEEEcCCccChHHhc-------cccchhh--------cCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCC
Confidence 999999999999988654320 0111111 01111 233456677788888999988 899999999
Q ss_pred CCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 715 DLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 715 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
|.++|++++++++++|+..+++++++++|+++|.+ ..+...++++.+.+||+++|+
T Consensus 664 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 664 DDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999998 444566888999999999985
No 9
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.2e-49 Score=466.91 Aligned_cols=587 Identities=14% Similarity=0.125 Sum_probs=403.1
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCCCccceeecC-Ccccc-ccceEEEeCCCCCeEEEEecCCCC-
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENENSVTFQWAP-FPVEM-TGASAVVPSPSGSKLLVVRNPENE- 122 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lt~~~-~~~~~-~~~~~~~~SPdG~~la~~~~~~~~- 122 (771)
+..++||++++|...... .....||+.+... ++++..+|.... +.... .....++|||||++|||.+...+.
T Consensus 112 ~~p~pdG~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e 187 (741)
T 1yr2_A 112 GLPQRRGASVFYSWNSGL----MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD 187 (741)
T ss_dssp CCCEEETTEEEEEEECSS----CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS
T ss_pred CCCEEECCEEEEEEEcCC----CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc
Confidence 344579999999986432 3356788866421 033445543322 11110 246789999999999999876532
Q ss_pred CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 004141 123 SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 201 (771)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (771)
..++++++ .+++.......... +..++|||| +.|+|.+.+.....
T Consensus 188 ~~~i~v~dl~tg~~~~~~~~~~~----------~~~~~wspD-~~l~~~~~~~~~~~----------------------- 233 (741)
T 1yr2_A 188 WRTVKFVGVADGKPLADELKWVK----------FSGLAWLGN-DALLYSRFAEPKEG----------------------- 233 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEE----------SCCCEESTT-SEEEEEECCCC--------------------------
T ss_pred eEEEEEEECCCCCCCCccCCCce----------eccEEEECC-CEEEEEEecCcccc-----------------------
Confidence 25677777 56655433211111 148899999 99999875542100
Q ss_pred ccccCCcCcccCCccCceEEEEEccCCce--eeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccC
Q 004141 202 GDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 278 (771)
Q Consensus 202 ~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~ 278 (771)
++.........||++++.++.. +.+...+. ......+.|||||+. |+|.+.... +.
T Consensus 234 -------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~----------~~ 292 (741)
T 1yr2_A 234 -------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW----VVITSSEGT----------DP 292 (741)
T ss_dssp ------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECTT----------CS
T ss_pred -------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE----EEEEEEccC----------CC
Confidence 0000011246899999988763 23311112 123668899999999 999885331 12
Q ss_pred CceeEEEecccccchhhhhhhhcCCCCCC--c-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeee
Q 004141 279 PCALYAVRVSLYKSEASELELKESSSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 355 (771)
Q Consensus 279 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d 355 (771)
..+||++|+ +++ + .++|+........+ ++|||++|+|.++.. ....+|+++|
T Consensus 293 ~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~-------~~~~~l~~~d 347 (741)
T 1yr2_A 293 VNTVHVARV-----------------TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG-------APLKKIVRVD 347 (741)
T ss_dssp CCEEEEEEE-----------------ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT-------CTTCEEEEEE
T ss_pred cceEEEEEC-----------------CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC-------CCCCEEEEEe
Confidence 358999998 555 6 77787665555556 469999999999874 2356899999
Q ss_pred cCCCC--CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-C
Q 004141 356 WPTNG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-E 432 (771)
Q Consensus 356 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~ 432 (771)
+.++. .+.++.... . .+..+.|+ +..|+++...++..+||.++++++..+.++.+ .
T Consensus 348 ~~~~~~~~~~l~~~~~-----------~--------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 406 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESK-----------D--------NLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGI 406 (741)
T ss_dssp CSSSSCEEEEEECCCS-----------S--------EEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSS
T ss_pred CCCCccccEEEecCCC-----------C--------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCC
Confidence 87642 122211110 0 12233455 55788888888999999999877767777653 3
Q ss_pred CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccc
Q 004141 433 SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSAN 512 (771)
Q Consensus 433 ~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 512 (771)
+.+....++++++.+++..++.++|.++|+.++.+++ .+ .+..+...++ ...+....+ .
T Consensus 407 ~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~--~~----~l~~~~~~~~--------~~~~~~~~~-------~ 465 (741)
T 1yr2_A 407 GSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK--TT----PWEPVHLTFD--------PADFRVEQV-------F 465 (741)
T ss_dssp CEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE--EE----ECSCCCCSSC--------GGGEEEEEE-------E
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc--EE----EEecCCCCCC--------hhHCEEEEE-------E
Confidence 3344556788999999999999999999999986543 11 1111111111 111222222 3
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+...+|.+++++++.|++. .++.|+||++|||++......|......|+++||+|+++|+||++++|..|........
T Consensus 466 ~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 543 (741)
T 1yr2_A 466 YPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDK 543 (741)
T ss_dssp EECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGG
T ss_pred EEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhc
Confidence 4556789999999999854 56789999999998876666777778889999999999999999999998876555555
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004141 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
+...++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...++
T Consensus 544 ~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~g 621 (741)
T 1yr2_A 544 KQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW--VDDYG 621 (741)
T ss_dssp THHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG--HHHHC
T ss_pred CCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh--HHHcC
Confidence 5567899999999999998889999999999999999999999999999999999999887654332211111 12222
Q ss_pred CCCCccCCCCCChhhHHHHhhcCcccccCC-CCC-cEEEEeeCCCCccCcHHHHHHHHHHHh---CCCCEEEEEeCCCCc
Q 004141 673 SKGKDSFTESPSVEDLTRFHSKSPISHISK-VKT-PTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVH 747 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~-P~lii~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~~H 747 (771)
. ....+....+...+|+.++.. +++ |+||+||++|.+||+.++.+++++|+. .|.++++++++++||
T Consensus 622 ~--------~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH 693 (741)
T 1yr2_A 622 Y--------PEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGH 693 (741)
T ss_dssp C--------TTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-----
T ss_pred C--------CCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCc
Confidence 1 112355666788899999987 884 999999999999999999999999999 889999999999999
Q ss_pred cCCCCC-ChHHHHHHHHHHHHHhhC
Q 004141 748 GIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~-~~~~~~~~i~~fl~~~L~ 771 (771)
++..+. ...+.+..+.+||.++|+
T Consensus 694 ~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 694 GSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 976542 335778899999999874
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.3e-49 Score=461.93 Aligned_cols=603 Identities=15% Similarity=0.129 Sum_probs=411.5
Q ss_pred HHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccc-cccceEEEe
Q 004141 28 SKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE-MTGASAVVP 106 (771)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~-~~~~~~~~~ 106 (771)
.+|++++..+-... -.+..+.+|.+..|.+.... .....+|+... .++..+.|....+..+ ......++|
T Consensus 66 ~~l~~~~~~~~~~~---~~~~p~~~g~~~y~~~~~~~----~~~~~~~r~~~--~~~~~vllD~n~la~~~~~~l~~~~~ 136 (693)
T 3iuj_A 66 AAIKEKLAASWNYA---KEGAPFREGRYHYFFKNDGL----QNQNVLWRQQE--GKPAEVFLDPNTLSPDGTTALDQLSF 136 (693)
T ss_dssp HHHHHHHHHHSCCC---EECCCEEETTEEEEEEECSS----CSSCEEEEECT--TSCCEEEECGGGGSTTSCCEEEEEEE
T ss_pred HHHHHHHHHhhccc---cCCCCEEECCEEEEEEEcCC----CceeEEEEeCC--CCCcEEEEehhhccCCCcEEEEEEEE
Confidence 34555555433221 12333457888888765322 22334554321 2212122211111111 123567899
Q ss_pred CCCCCeEEEEecCCC-CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004141 107 SPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 107 SPdG~~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
||||++|||..+..+ +...+++++ .+++....+. .... +..++|| ||+.|+|.+.+.....
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k---------~~~~~Ws-Dg~~l~y~~~~~~~~~------ 199 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVK---------FSGISWL-GNEGFFYSSYDKPDGS------ 199 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEE---------SCCCEEE-TTTEEEEEESSCCC--------
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCce---------eccEEEe-CCCEEEEEEecCcccc------
Confidence 999999999987653 235677777 5565443321 1110 1588999 9999999986642100
Q ss_pred CCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCC--CCccceEEEecCCCCCccEEEE
Q 004141 185 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK--SLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~--~~~~~~~~wspDg~~~~~~l~~ 260 (771)
+.-......+||++++.++.. +.+...+. .....++.|||||+. |++
T Consensus 200 -------------------------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~----l~~ 250 (693)
T 3iuj_A 200 -------------------------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF----LLI 250 (693)
T ss_dssp ------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE----EEE
T ss_pred -------------------------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE----EEE
Confidence 000011346899999987653 33411111 223457899999999 998
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cceecCCCCccccceeecCCCCEEEEEecCC
Q 004141 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
.+.... ..++||++|+ +++ +.++|+........+ |++||++|+|.++.+
T Consensus 251 ~~~~~~-----------~~~~i~~~d~-----------------~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 251 SAANST-----------SGNRLYVKDL-----------------SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEESSS-----------SCCEEEEEET-----------------TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTT
T ss_pred EEccCC-----------CCcEEEEEEC-----------------CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCC
Confidence 874322 2248999998 444 677887766655566 899999999999875
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
....+|+++|+.+++..... .+++ . .. .. . .|+++++.|++....++..+|+.+
T Consensus 302 -------~~~~~l~~~d~~~~~~~~~~----~l~~---~--~~--------~~-~-~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 302 -------APNRRLVTVDAANPGPAHWR----DLIP---E--RQ--------QV-L-TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp -------CTTCEEEEEETTSCCGGGCE----EEEC---C--CS--------SC-E-EEEEETTEEEEEEEETTEEEEEEE
T ss_pred -------CCCCEEEEEeCCCCCccccE----EEec---C--CC--------CE-E-EEEEECCEEEEEEEECCeeEEEEE
Confidence 22468999999876541110 1111 0 00 01 1 799999999999988888999999
Q ss_pred ECCCCcEEEecCCC-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccC
Q 004141 419 NVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSR 497 (771)
Q Consensus 419 d~~tg~~~~l~~~~-~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 497 (771)
+++++..+.+.... +......++++++.+++..+++++|.++|++++.+++ .+ .++... ..+ ...
T Consensus 356 d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~--~~-~l~~~~---~~~--------~~~ 421 (693)
T 3iuj_A 356 DYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA--IS-LYRASA---APF--------KPE 421 (693)
T ss_dssp CTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC--EE-EEECCC---SSC--------CGG
T ss_pred ECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe--EE-EEEeCC---CCc--------Chh
Confidence 99988888886543 2233345567899999999999999999999986543 11 111110 011 111
Q ss_pred cceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCC
Q 004141 498 QFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS 577 (771)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~ 577 (771)
.+....+ .+...+|.+++++++.|++....++.|+||++|||++......|...+..|+++||+|+++|+||+
T Consensus 422 ~~~~~~~-------~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~ 494 (693)
T 3iuj_A 422 DYVSEQR-------FYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGG 494 (693)
T ss_dssp GEEEEEE-------EEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTS
T ss_pred hCeeEEE-------EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCC
Confidence 2223222 345668899999999999766677899999999998876677788888889999999999999999
Q ss_pred CCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh
Q 004141 578 LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 578 ~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~ 657 (771)
+++|..|............++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+.
T Consensus 495 g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~ 574 (693)
T 3iuj_A 495 GEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH 574 (693)
T ss_dssp STTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG
T ss_pred CccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc
Confidence 99999998776666666778999999999999988999999999999999999999999999999999999999876543
Q ss_pred cCCCCCcchhhhhccCCCCccCCCCCChhh-HHHHhhcCcccccCC-CCCc-EEEEeeCCCCccCcHHHHHHHHHHHhC-
Q 004141 658 GTTDIPDWCYVESYGSKGKDSFTESPSVED-LTRFHSKSPISHISK-VKTP-TIFLLGAQDLRVPVSNGLQYARALREK- 733 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~-i~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~- 733 (771)
.......| ...++. ....+. ...+...+|+.++.+ +++| +||+||++|.+||+.++.+++++|+..
T Consensus 575 ~~~~~~~~--~~~~g~--------p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~ 644 (693)
T 3iuj_A 575 TFTAGTGW--AYDYGT--------SADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADN 644 (693)
T ss_dssp GSGGGGGC--HHHHCC--------TTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHC
T ss_pred cCCCchhH--HHHcCC--------ccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhC
Confidence 32111111 112221 112233 556778899999999 8987 999999999999999999999999998
Q ss_pred --CCCEEEEEeCCCCccCCCC-CChHHHHHHHHHHHHHhhC
Q 004141 734 --GVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 734 --g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~~~L~ 771 (771)
|+++++++++++||++..+ ....+.+..+.+||.++|+
T Consensus 645 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 645 AGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp CSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999998764 4456778899999999875
No 11
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2.3e-49 Score=463.62 Aligned_cols=591 Identities=17% Similarity=0.229 Sum_probs=403.4
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
...|+| +.++|+.+ +.++++++. +++.++++... ..+..++|||||++|||+++. .+
T Consensus 87 ~~~spd-~~~~~~~~----------~~i~~~d~~--~~~~~~l~~~~-----~~~~~~~~SpdG~~la~~~~~-----~i 143 (706)
T 2z3z_A 87 TLDAGR-GLVVLFTQ----------GGLVGFDML--ARKVTYLFDTN-----EETASLDFSPVGDRVAYVRNH-----NL 143 (706)
T ss_dssp EEETTT-TEEEEEET----------TEEEEEETT--TTEEEEEECCT-----TCCTTCEECTTSSEEEEEETT-----EE
T ss_pred EEECCC-CeEEEEEC----------CEEEEEECC--CCceEEccCCc-----ccccCCcCCCCCCEEEEEECC-----eE
Confidence 345789 88888753 478887763 33555555433 446779999999999997542 47
Q ss_pred EEEe-cC-----CcceEEEecCCc-c-ccc-ccCC--CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004141 127 FELW-SQ-----SQLEKEFHVPQT-V-HGS-VYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 127 ~~~~-~~-----~~~~~~~~~~~~-~-~g~-~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
++++ .+ ++.++++..... + .|. ++.+ .....++|||||++|+|.+.+..... .+............
T Consensus 144 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~~~~~~~~~~~~~~-- 220 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-PTPIVDYHPLEAES-- 220 (706)
T ss_dssp EEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-CEEEEECCSSSCEE--
T ss_pred EEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-eEEeeccCCCCCce--
Confidence 7666 45 555555443221 0 000 0000 01258999999999999874432211 11100000000000
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004141 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
....|... |. ......|++||+++++.+.+... .....+..++|||||+. |++.+....
T Consensus 221 ----~~~~y~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~-------- 280 (706)
T 2z3z_A 221 ----KPLYYPMA-GT---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI----LYVAEVNRA-------- 280 (706)
T ss_dssp ----EEECCCBT-TS---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE----EEEEEECTT--------
T ss_pred ----EEeeCCCC-CC---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE----EEEEEeCCC--------
Confidence 00011111 11 12347899999999998777311 23345778999999998 988763221
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCC--Cc---cccceeecC--CCCEEEEEecCCCCCCCCcc
Q 004141 275 CYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTES--IS---SAFFPRFSP--DGKFLVFLSAKSSVDSGAHS 346 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~--~~---~~~~p~~Sp--DG~~l~f~~~~~~~~~g~~~ 346 (771)
+....|+++|+ .++ ..+.+... .. ....+.||| ||+.| +.+..+ |
T Consensus 281 --~~~~~v~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~----g--- 333 (706)
T 2z3z_A 281 --QNECKVNAYDA-----------------ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRD----G--- 333 (706)
T ss_dssp --SCEEEEEEEET-----------------TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTT----S---
T ss_pred --CCeeEEEEEEC-----------------CCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccC----C---
Confidence 12237999998 666 44444321 11 135789999 99854 555443 2
Q ss_pred ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC-CccccCCCEEEEEeeeCC--eeEEEEEECCCC
Q 004141 347 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGS--SQVIISVNVSSG 423 (771)
Q Consensus 347 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~-~~~s~Dg~~l~~~~~~~~--~~~l~~~d~~tg 423 (771)
..+||.++..++..+.++.... .+.. +.|+|||+.|++.+..++ ...||.++++++
T Consensus 334 -~~~l~~~~~~~~~~~~l~~~~~--------------------~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 334 -WNHLYLYDTTGRLIRQVTKGEW--------------------EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp -SCEEEEEETTSCEEEECCCSSS--------------------CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred -ccEEEEEECCCCEEEecCCCCe--------------------EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 4678988866544444432211 1122 579999999998887654 568999999999
Q ss_pred cEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeee
Q 004141 424 ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMK 503 (771)
Q Consensus 424 ~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 503 (771)
+.++++.... +....||+||+.+++.+++.+.|.++++.++.+++ ... ++ ..+ .+.. ......+.
T Consensus 393 ~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~----~~~--~~----~~~-~~~~-~~~~~~~~-- 457 (706)
T 2z3z_A 393 KTKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS----HTL--LE----AKN-PDTG-YAMPEIRT-- 457 (706)
T ss_dssp CCEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE----EEE--EE----CC--------CCCCEEE--
T ss_pred CceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe----Eee--cc----ccc-hhhh-cCCCCcEE--
Confidence 9888875433 55678999999999999999999999999876542 111 11 001 1100 00111111
Q ss_pred ecccCcccccccCCC-ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchH----HHHHHHHCCcEEEEECCCCC
Q 004141 504 IPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSK----SLAFLSSVGYSLLIVNYRGS 577 (771)
Q Consensus 504 ~~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~----~~~~la~~G~~Vv~~d~rG~ 577 (771)
..+...+| .+++++++.|+++++.+++|+||++|||++.... ..|.. .++.|+++||.|+++|+||.
T Consensus 458 -------~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~ 530 (706)
T 2z3z_A 458 -------GTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGS 530 (706)
T ss_dssp -------EEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTC
T ss_pred -------EEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCC
Confidence 23445567 8999999999876666788999999998876532 24443 57889999999999999999
Q ss_pred CCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh
Q 004141 578 LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 578 ~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~ 657 (771)
++++..+.......++...++|+.++++++.+++.++.+|++|+||||||++++.++.++|++++++|+.+|+.++..+.
T Consensus 531 g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 610 (706)
T 2z3z_A 531 ANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA 610 (706)
T ss_dssp SSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSB
T ss_pred cccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHH
Confidence 88888777666667777778999999999988877889999999999999999999999999999999999987754221
Q ss_pred cCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCE
Q 004141 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 737 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 737 (771)
..+.+.+ ...+ ......+...+|...+.++++|+|++||++|.++|++++++++++|+..++++
T Consensus 611 -------~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 674 (706)
T 2z3z_A 611 -------IMYGERY--------FDAP-QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYP 674 (706)
T ss_dssp -------HHHHHHH--------HCCT-TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCC
T ss_pred -------hhhhhhh--------cCCc-ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCe
Confidence 0111111 1112 23345667778888999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 738 KVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 738 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++++|+++|.+... ...++++.+.+||+++|
T Consensus 675 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 675 DYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp EEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 999999999998765 56688999999999886
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=1.2e-47 Score=447.62 Aligned_cols=598 Identities=14% Similarity=0.095 Sum_probs=404.7
Q ss_pred HHHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCC--C-ccceeecCCccccc--c
Q 004141 27 LSKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENE--N-SVTFQWAPFPVEMT--G 100 (771)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~lt~~~~~~~~~--~ 100 (771)
-.+||+++...-..... ....++|.+++|+.... ++....+++.+... .++ . .+.+....+....+ .
T Consensus 103 ~~~l~~e~~~~~~~~~~---~~p~~~g~~~yy~~~~~----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~ 175 (751)
T 2xe4_A 103 RDDIYAEHISHINEDDM---SAPYVYGKYRYYTREVK----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCD 175 (751)
T ss_dssp HHHHHHHHHHTSCSSEE---CCCEEETTEEEEEEECT----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCE
T ss_pred HHHHHHHHHHhcccccC---CCCeEECCEEEEEEECC----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEE
Confidence 34566776655443331 11124889999986532 22234455544210 222 2 22222211110001 3
Q ss_pred ceEEEeC-CCCCeEEEEecCCC-CCCeEEEEe-cCC-cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 101 ASAVVPS-PSGSKLLVVRNPEN-ESPIQFELW-SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 101 ~~~~~~S-PdG~~la~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
...++|| |||++|||+.+..+ +..++++++ .++ +. +.. ... +.+.+++|||||+.|+|++.+...
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~---~~~------~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD---KVS------GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC---CEE------EECSCCEECSSTTEEEEEEECTTC
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc---ccc------CceeeEEEecCCCEEEEEEECCCC
Confidence 5679999 99999999988653 234588888 555 31 111 000 012589999999999998654210
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCCCCccceEEEecCCCCC
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~~~~~~~~~wspDg~~~ 254 (771)
...+||++++.+++. +.+...+......++.|||||+.
T Consensus 245 ---------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~- 284 (751)
T 2xe4_A 245 ---------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT- 284 (751)
T ss_dssp ---------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE-
T ss_pred ---------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE-
Confidence 125899999988753 23310122223457899999999
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cc--eecCCCCccccceeecCC---
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PV--VNLTESISSAFFPRFSPD--- 327 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~--~~lt~~~~~~~~p~~SpD--- 327 (771)
|+|.++.. ..++||++|+ +++ +. +.|+... ..+.||||
T Consensus 285 ---l~~~~~~~------------~~~~l~~~d~-----------------~~~~~~~~~~~l~~~~---~~~~~s~~~~~ 329 (751)
T 2xe4_A 285 ---LCIGSQSP------------ETAEVHLLDL-----------------RKGNAHNTLEIVRPRE---KGVRYDVQMHG 329 (751)
T ss_dssp ---EEEEEECS------------SCEEEEEEES-----------------SSCTTCCCEEESSCCC---TTCCEEEEEET
T ss_pred ---EEEEecCC------------CCceEEEEEC-----------------CCCCCCceeEEeecCC---CCceEEEeeee
Confidence 99988532 2348999998 443 45 6666543 35567777
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCC-CCCC-CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~ 405 (771)
|+.|+|.++.+ + ....+|+++|+.+. +.+. +.....++ .+. .|+.+++.|++
T Consensus 330 g~~l~~~t~~~----~--a~~~~L~~~d~~~~~~~~~~li~~~~~~------------------~l~--~~~~~~~~lv~ 383 (751)
T 2xe4_A 330 TSHLVILTNEG----G--AVNHKLLIAPRGQPSDWSHVLVDHSEDV------------------FME--SIAVRSNYLVV 383 (751)
T ss_dssp TTEEEEEECTT----T--CTTCEEEEEETTSTTCCCCEEECCCSSE------------------EEE--EEEECSSEEEE
T ss_pred CCEEEEEeCCC----C--CCCcEEEEEcCCCcccceeeEECCCCCc------------------EEE--EEEEECCEEEE
Confidence 99999999874 1 23578999998752 3232 22111000 011 24556778999
Q ss_pred EeeeCCeeEEEEEEC-------CCCc-EEEecCCCCCceeeEE------eecCCEEEEEEeCCCCCCeEEEEEecccCCC
Q 004141 406 SSIWGSSQVIISVNV-------SSGE-LLRITPAESNFSWSLL------TLDGDNIIAVSSSPVDVPQVKYGYFVDKANK 471 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~-------~tg~-~~~l~~~~~~~~~~~~------s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~ 471 (771)
....++...|+.+++ ++++ .+.|+..... ....+ +.+++.+++..+++++|+++|++++.+++
T Consensus 384 ~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~-- 460 (751)
T 2xe4_A 384 AGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPI-FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS-- 460 (751)
T ss_dssp EEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSS-CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC--
T ss_pred EEEeCCEEEEEEEecccccccccCCccceEECCCCce-eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc--
Confidence 999999999999996 6777 7888644332 22234 45888999999999999999999876543
Q ss_pred ceeeeeccCCCCC-CCchhhhhccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC
Q 004141 472 GTWSWLNVSSPIS-RCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV 550 (771)
Q Consensus 472 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~ 550 (771)
. ..++.. +.. .++ ...+....+ .+...+|.+++++++.|++....++.|+||++|||++..
T Consensus 461 ~-~~l~~~--~~~~~~~--------~~~~~~~~~-------~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~ 522 (751)
T 2xe4_A 461 R-TAVKVR--EVGGGFD--------AANYKVERR-------FATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLS 522 (751)
T ss_dssp E-EEEEEC--CCCTTCC--------GGGEEEEEE-------EEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCC
T ss_pred E-EEEecc--ccccCCC--------ccceEEEEE-------EEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcC
Confidence 1 111111 110 111 111222222 445667899999999998765567899999999998776
Q ss_pred CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh-cCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHH
Q 004141 551 SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFL 629 (771)
Q Consensus 551 ~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~ 629 (771)
....|...+..|+++||+|+++|+||++++|..|.. .....++...++|+.+++++|++++.+|++||+|+|+|+||++
T Consensus 523 ~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l 602 (751)
T 2xe4_A 523 MDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLL 602 (751)
T ss_dssp CCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHH
T ss_pred CCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHH
Confidence 555676677788999999999999999999999877 6555566678999999999999998899999999999999999
Q ss_pred HHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCc-EE
Q 004141 630 TTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TI 708 (771)
Q Consensus 630 a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~l 708 (771)
++.++.++|++|+++|+.+|+.++..+......+... ..+ ..+......+....+...+|+.++.++++| +|
T Consensus 603 a~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~-----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~L 675 (751)
T 2xe4_A 603 MGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTT--GEW-----EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIM 675 (751)
T ss_dssp HHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHH--HHT-----TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEE
T ss_pred HHHHHHhCchheeEEEEeCCcchHHhhhcccCcccch--hhH-----HHcCCCCCHHHHHHHHhcChhhhhccCCCCcee
Confidence 9999999999999999999999887654322222110 011 011111123344566788999999999997 99
Q ss_pred EEeeCCCCccCcHHHHHHHHHHHhCCC---CEEEEEeCCCCccCCCCC-ChHHHHHHHHHHHHHhhC
Q 004141 709 FLLGAQDLRVPVSNGLQYARALREKGV---ETKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 709 ii~G~~D~~vp~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~fl~~~L~ 771 (771)
|+||++|.+||+.++.+++++|+..++ .+.+.++++++|++.... ...+.+..+.+||.++|+
T Consensus 676 ii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 676 VQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999854 556777799999987543 334566789999999875
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=2.2e-38 Score=360.00 Aligned_cols=468 Identities=13% Similarity=0.131 Sum_probs=326.1
Q ss_pred ceEEEEEccCCc--eeec-cCCCCCCccceEEEecCCCCCccEE---EEEeecCcceeeeeeeeccCCceeEEEeccccc
Q 004141 218 PSLFVININSGE--VQAV-KGIPKSLSVGQVVWAPLNEGLHQYL---VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 218 ~~l~v~d~~~~~--~~~l-~~~~~~~~~~~~~wspDg~~~~~~l---~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 291 (771)
..+|.+.+.+.. -+.+ .+...+.. -++.-++|++. . ++++...+ ...+++|.++++.
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~-~~~~~~~~~~~----~~~~~~i~~~~~----------~~~~~~~~~~~~~-- 278 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIY-VSAGKLLSDTI----SSSLIFISANKD----------FYNYDNYILDTKY-- 278 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCE-EEEEESSCTTT----CSSEEEEEEESS----------SSCEEEEEEECSS--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceE-EEEEEecCCCc----eEEEEEEEEecc----------cCceeEEEEcCCC--
Confidence 578888876652 2222 21222222 23455778775 3 33331111 1235899998621
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC-----C---C
Q 004141 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-----F---S 363 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-----~---~ 363 (771)
..++.++|.... ...+.++++|+.++++..+... .|......+|+.+|+++... . .
T Consensus 279 -------------~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 279 -------------KNLKLQKINMPS--DATLQGSFKEYVFWLLRSDWKF-KSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp -------------SSCEEEECCSCT--TCEEEEEETTEEEEECSSCEEE-TTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred -------------CCCcceEeecCC--cceEeeeECCEEEEEECccccc-ccccCCCCeEEEEECCcccccccccccceE
Confidence 225556664332 2335677777654444333110 01112346799999876421 1 0
Q ss_pred -CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEE-ecCC-CCCceee
Q 004141 364 -SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR-ITPA-ESNFSWS 438 (771)
Q Consensus 364 -~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~-l~~~-~~~~~~~ 438 (771)
++...+ ..+..+.|+.| .|++....++...|+.+++.+|+ .+. +..+ .+.+...
T Consensus 343 ~~~~~~~-------------------~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~ 401 (711)
T 4hvt_A 343 LFTPTAN-------------------EVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGM 401 (711)
T ss_dssp EECCCTT-------------------EEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEE
T ss_pred EECCCCC-------------------CeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEE
Confidence 111111 12345567765 58888888899999999987774 445 4433 2334444
Q ss_pred EEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccccccCCC
Q 004141 439 LLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQ 518 (771)
Q Consensus 439 ~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 518 (771)
..+++++.+++..+++++|+++|++++. ++ . +.+..+ +. .+....+....+ .+...+|
T Consensus 402 ~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~--~----~~l~~~----~~----~~~~~~~~~e~v-------~~~s~DG 459 (711)
T 4hvt_A 402 SSYEEEEEALITIENSIVPPTIYLWVKT-HE--L----KIIRKA----LY----SFDSENYVLEQK-------EATSFDG 459 (711)
T ss_dssp ECCTTCSCEEEEEECSSSCCEEEEECTT-SC--E----EEEECC----SS----CCCGGGEEEEEE-------EEECTTS
T ss_pred eecCcCCEEEEEEecCCCCCEEEEEeCC-Cc--E----EEEecC----Cc----ccCcccCeeEEE-------EEECCCC
Confidence 4567888999999999999999999875 32 1 111111 11 011222222222 4556789
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+++++++.|++....++.|+||++|||++......|.... +.|+++||+|+++|+||++++|..|.......++...+
T Consensus 460 ~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~ 539 (711)
T 4hvt_A 460 VKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAF 539 (711)
T ss_dssp CEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred eEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcH
Confidence 99999999999776678899999999998877666776655 48899999999999999999999998887777788889
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCc
Q 004141 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 677 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (771)
+|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........|. ..++.
T Consensus 540 ~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~--~~~G~---- 613 (711)
T 4hvt_A 540 NDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWV--TEYGD---- 613 (711)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGH--HHHCC----
T ss_pred HHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHH--HHhCC----
Confidence 999999999999998999999999999999999999999999999999999999876654432222221 22222
Q ss_pred cCCCCCChhhHHHHhhcCcccccCCCCC--cEEEEeeCCCCccCcHHHHHHHHHH-HhCCCCEEEEEeCCCCccCCCCC-
Q 004141 678 SFTESPSVEDLTRFHSKSPISHISKVKT--PTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQ- 753 (771)
Q Consensus 678 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~--P~lii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~- 753 (771)
....+....+...||+.++.++++ |+||+||++|.+||+.++.+++++| +..|++++++++++++|++....
T Consensus 614 ----p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~ 689 (711)
T 4hvt_A 614 ----PEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLK 689 (711)
T ss_dssp ----TTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHH
T ss_pred ----CcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcc
Confidence 122355677888999999999886 9999999999999999999999999 99999999999999999986533
Q ss_pred ChHHHHHHHHHHHHHhhC
Q 004141 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~fl~~~L~ 771 (771)
.....+..+.+||.++|+
T Consensus 690 ~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 690 ESANYFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhC
Confidence 344566788999999985
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=9.9e-25 Score=235.20 Aligned_cols=329 Identities=14% Similarity=0.099 Sum_probs=204.7
Q ss_pred EEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccC
Q 004141 73 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYA 151 (771)
Q Consensus 73 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 151 (771)
.+|. ....+...++||..+..........|+|||||++|||.+..+ +..++|.++ .+++.++++......
T Consensus 12 ~~~~--~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~------ 82 (388)
T 3pe7_A 12 DTYQ--DASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDN------ 82 (388)
T ss_dssp EEEE--CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBC------
T ss_pred eEEe--cCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCC------
Confidence 4554 223444566776554110001122389999999999998754 567899888 666666666543222
Q ss_pred CCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc--ccccCCcCcc------------------
Q 004141 152 DGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ--GDWEEDWGET------------------ 211 (771)
Q Consensus 152 ~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~g~~------------------ 211 (771)
...+.|||||++|+|.+...... .++...............+... ..+++|....
T Consensus 83 ---~~~~~~spdg~~l~~~~~~~~l~--~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 83 ---TFGGFLSPDDDALFYVKDGRNLM--RVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp ---SSSCEECTTSSEEEEEETTTEEE--EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred ---ccceEEcCCCCEEEEEeCCCeEE--EEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 12678999999999998542110 1111111100000001111100 1112221111
Q ss_pred ----cCCccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEe
Q 004141 212 ----YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 286 (771)
Q Consensus 212 ----~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d 286 (771)
+.......|+++|+.+++.+.+ +.....+..+.||| ||+. |+|++.... .....+||.+|
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~~~~l~~~d 222 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDST----VAFCHEGPH---------DLVDARMWLIN 222 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCT---------TTSSCSEEEEE
T ss_pred hhhhhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCE----EEEEEecCC---------CCCcceEEEEe
Confidence 1122347899999999999888 45555678899999 9999 999874211 01244899999
Q ss_pred cccccchhhhhhhhcCCCCCCcceecCCCCc--cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC
Q 004141 287 VSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 364 (771)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 364 (771)
+ +++..++|+.... .+..|.|||||++|+|.+.+. | .....|+++|+.+++.+.+
T Consensus 223 ~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~----~--~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 223 E-----------------DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK----G--SPDRFIYSADPETLENRQL 279 (388)
T ss_dssp T-----------------TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET----T--CCCEEEEEECTTTCCEEEE
T ss_pred C-----------------CCCceEEeeeCCCCcccccceECCCCCEEEEEecCC----C--CCcceEEEEecCCCceEEE
Confidence 8 7788888887653 477899999999999998764 2 1123599999998876444
Q ss_pred ccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee------CCeeEEEEEECCCCcEEEecCCCC-----
Q 004141 365 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPAES----- 433 (771)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~------~~~~~l~~~d~~tg~~~~l~~~~~----- 433 (771)
+..... . .+........|||||+.|++.... .+...||++|+++++.++|+....
T Consensus 280 ~~~~~~-~-------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 345 (388)
T 3pe7_A 280 TSMPAC-S-------------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVF 345 (388)
T ss_dssp EEECCE-E-------------EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCB
T ss_pred EcCCCc-e-------------eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCccccc
Confidence 321110 0 000113345799999999887643 556789999999999999986654
Q ss_pred ------CceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 434 ------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 434 ------~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
....+.|+|||+.|++.... ...++||++++.+.
T Consensus 346 ~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 346 EGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp TTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred ccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 34567899999999988755 45577999887643
No 15
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.92 E-value=6e-24 Score=214.81 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=143.2
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+.||.+|.++++.|. ..++.|+||++||++.......+...++.|+++||+|+++|+||++..+............
T Consensus 36 ~~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~ 112 (259)
T 4ao6_A 36 LEVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVV 112 (259)
T ss_dssp EEETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGG
T ss_pred EeeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhh
Confidence 3568999999999997 4567899999999887655556777889999999999999999966543332111111111
Q ss_pred ---------------ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc
Q 004141 594 ---------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG 658 (771)
Q Consensus 594 ---------------~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~ 658 (771)
...+.|..++++++... +++++|+++|+|+||++++.++...|+ ++++|+..+....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~----- 184 (259)
T 4ao6_A 113 GLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEG----- 184 (259)
T ss_dssp GSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS-----
T ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccc-----
Confidence 01134666777777655 678999999999999999999998775 5665543332110
Q ss_pred CCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 659 TTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. ..++...+.+|++|+|++||++|++||+++++++++++.. .+.+
T Consensus 185 ------------------------~~--------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~--~~k~ 230 (259)
T 4ao6_A 185 ------------------------VN--------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT--KQKT 230 (259)
T ss_dssp ------------------------TT--------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC--SSEE
T ss_pred ------------------------cc--------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC--CCeE
Confidence 00 1123445678899999999999999999999999998843 4567
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++++|+..|.+ ...+.+..+++||++|||
T Consensus 231 l~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 231 LHVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred EEEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 88898744433 345778899999999997
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=7.8e-23 Score=222.03 Aligned_cols=266 Identities=17% Similarity=0.198 Sum_probs=198.9
Q ss_pred CcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-
Q 004141 52 NGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW- 130 (771)
Q Consensus 52 dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~- 130 (771)
.+.+|+|...... +...+.|++++++ +...+.++... ..+..++|||||++|||.+... +...+++.+
T Consensus 142 ~~~~l~~~s~~~~---~~~~~~i~i~d~~--g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~ 210 (415)
T 2hqs_A 142 FRTRIAYVVQTNG---GQFPYELRVSDYD--GYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQTL 210 (415)
T ss_dssp TTCEEEEEEECSS---SSCCEEEEEEETT--SCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-SSCEEEEEET
T ss_pred CCCEEEEEEecCC---CCccceEEEEcCC--CCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-CCcEEEEEEC
Confidence 4667787765421 1223788998874 34556665543 5688999999999999998654 445666666
Q ss_pred cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCc
Q 004141 131 SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGE 210 (771)
Q Consensus 131 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~ 210 (771)
.+++.+++....... ..++|||||++|+|.+...
T Consensus 211 ~tg~~~~l~~~~~~~----------~~~~~spdg~~la~~~~~~------------------------------------ 244 (415)
T 2hqs_A 211 ANGAVRQVASFPRHN----------GAPAFSPDGSKLAFALSKT------------------------------------ 244 (415)
T ss_dssp TTCCEEEEECCSSCE----------EEEEECTTSSEEEEEECTT------------------------------------
T ss_pred CCCcEEEeecCCCcc----------cCEEEcCCCCEEEEEEecC------------------------------------
Confidence 556555554433222 5899999999999975432
Q ss_pred ccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccc
Q 004141 211 TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 290 (771)
Q Consensus 211 ~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 290 (771)
+...||+||+.+++.+.+ +.....+..+.|||||+. |+|.+... ...+||.+|+
T Consensus 245 -----g~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~spdg~~----l~~~s~~~------------g~~~i~~~d~--- 298 (415)
T 2hqs_A 245 -----GSLNLYVMDLASGQIRQV--TDGRSNNTEPTWFPDSQN----LAFTSDQA------------GRPQVYKVNI--- 298 (415)
T ss_dssp -----SSCEEEEEETTTCCEEEC--CCCSSCEEEEEECTTSSE----EEEEECTT------------SSCEEEEEET---
T ss_pred -----CCceEEEEECCCCCEEeC--cCCCCcccceEECCCCCE----EEEEECCC------------CCcEEEEEEC---
Confidence 346899999999999888 555556788999999999 99987422 2237999998
Q ss_pred cchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceee
Q 004141 291 KSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 370 (771)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 370 (771)
.+++.++++.....+..++|||||++|++.+.+. | ...|+++|+.+++.+.++...
T Consensus 299 --------------~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~----g----~~~i~~~d~~~~~~~~l~~~~-- 354 (415)
T 2hqs_A 299 --------------NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG----G----QQHIAKQDLATGGVQVLSSTF-- 354 (415)
T ss_dssp --------------TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS----S----CEEEEEEETTTCCEEECCCSS--
T ss_pred --------------CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC----C----ceEEEEEECCCCCEEEecCCC--
Confidence 7778888887777788999999999999998764 2 467999999887654432211
Q ss_pred EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeec
Q 004141 371 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 443 (771)
Q Consensus 371 ~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d 443 (771)
....++|+|||+.|++.+...+...||.+|++++..++|+...+.+..+.|+|.
T Consensus 355 -------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 355 -------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred -------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 234678999999999988888888999999998899999887776777888874
No 17
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.91 E-value=9e-24 Score=216.21 Aligned_cols=231 Identities=16% Similarity=0.194 Sum_probs=170.6
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~ 591 (771)
+...+|..+.+++..|......++.|+||++||+++... ...+...+..|+++||.|+++|+||.+.... ..
T Consensus 19 ~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-------~~ 91 (276)
T 3hxk_A 19 FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN-------YN 91 (276)
T ss_dssp CCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC-------SC
T ss_pred ccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC-------CC
Confidence 344567888877665543223377899999999775432 3356678889999999999999999644210 01
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhh-CCCceeEEEecCCccchhhhhcCCCCCcchh
Q 004141 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCY 667 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~ 667 (771)
.......|+.++++++.++. .+++++|+|+|||+||.+++.++.+ .+.+++++|+.+|+.++....... ..
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~--~~--- 166 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSD--LS--- 166 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSS--SS---
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcc--hh---
Confidence 11235789999999998864 3788999999999999999999988 788999999999987654321110 00
Q ss_pred hhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCc
Q 004141 668 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 747 (771)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H 747 (771)
...+. + .. . ...++...+.++.+|+|++||++|..+|++++..+++.++..+.+++++++++++|
T Consensus 167 --------~~~~~--~--~~--~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H 231 (276)
T 3hxk_A 167 --------HFNFE--I--EN--I-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPH 231 (276)
T ss_dssp --------SSCCC--C--SC--C-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCT
T ss_pred --------hhhcC--c--hh--h-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 01111 1 11 1 44567777888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCC------------hHHHHHHHHHHHHHhh
Q 004141 748 GIERPQS------------DFESFLNIGLWFKKYC 770 (771)
Q Consensus 748 ~~~~~~~------------~~~~~~~i~~fl~~~L 770 (771)
.+..... ..+++..+.+||+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 232 GVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 8775333 3568888999999875
No 18
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.7e-23 Score=209.27 Aligned_cols=214 Identities=17% Similarity=0.216 Sum_probs=161.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh-------cCC
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-------SLP 589 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~-------~~~ 589 (771)
+|.++.++++.|++ ..++.|+||++||..+. ...+...+..|+++||.|+++|++|.++....+.. ...
T Consensus 14 ~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~ 89 (241)
T 3f67_A 14 QGENMPAYHARPKN--ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVS 89 (241)
T ss_dssp TTEEEEEEEEEETT--CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGG
T ss_pred CCcceEEEEecCCC--CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhh
Confidence 67899999999984 33568999999996554 34567788899999999999999986554332110 000
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004141 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
........+|+.++++++.+++ +|.++|+|+|||+||.+++.++.++|+ ++++++..+..... .
T Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~-------~------- 153 (241)
T 3f67_A 90 KVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE-------K------- 153 (241)
T ss_dssp GSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-------C-------
T ss_pred cCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-------C-------
Confidence 0111234789999999998886 778999999999999999999999887 66666654432100 0
Q ss_pred hccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004141 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
..+...+|...+.++++|+|+++|++|..+|++++..+++.+++.+.+++++++++++|.+
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 154 -------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp -------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred -------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 0112234556677889999999999999999999999999999999999999999999988
Q ss_pred CCC-------CChHHHHHHHHHHHHHh
Q 004141 750 ERP-------QSDFESFLNIGLWFKKY 769 (771)
Q Consensus 750 ~~~-------~~~~~~~~~i~~fl~~~ 769 (771)
... ....+.++.+++||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 632 22356788999999764
No 19
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.90 E-value=3e-23 Score=209.11 Aligned_cols=241 Identities=13% Similarity=0.153 Sum_probs=160.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc-c
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-S 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~-~ 594 (771)
.+|.+++++++.|++ ..++.|+||++||.+.+.....|...+..|+++||.|+++|+||.+.+.... .... .
T Consensus 8 ~~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~ 80 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKF-----EDHTLF 80 (251)
T ss_dssp ETTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG-----GGCCHH
T ss_pred cCCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcc-----ccCCHH
Confidence 367899999998863 2346789999999776532345777888999999999999999944332111 0111 1
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
...+|+.++++++.+...+ ++++|+||||||.+++.++.++|++++++|+.+|.................+.......
T Consensus 81 ~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T 2wtm_A 81 KWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPD 158 (251)
T ss_dssp HHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCS
T ss_pred HHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcch
Confidence 2367788888888655323 58999999999999999999999999999999987543221100000000000000000
Q ss_pred CCccCCCCC-ChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC
Q 004141 675 GKDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 753 (771)
Q Consensus 675 ~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 753 (771)
....+.... ...........++...+.++++|+|+++|++|..+|++.++.+++.+. +++++++++++|.+ .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~--~~ 232 (251)
T 2wtm_A 159 ELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIPGDTHCY--DH 232 (251)
T ss_dssp EEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEETTCCTTC--TT
T ss_pred HHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEECCCCccc--ch
Confidence 000000000 001111222334445567789999999999999999999888877663 48999999999988 56
Q ss_pred ChHHHHHHHHHHHHHhhC
Q 004141 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~fl~~~L~ 771 (771)
...++.+.+.+||+++++
T Consensus 233 ~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 233 HLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcc
Confidence 666899999999998874
No 20
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=1.4e-22 Score=207.35 Aligned_cols=225 Identities=17% Similarity=0.207 Sum_probs=162.2
Q ss_pred CCCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004141 516 GAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~---~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+|.++.+.+|.|+.. ...++.|+||++|||++... ...+...+..|+++||.|+++||||.+..+ .
T Consensus 11 ~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~--------~- 81 (277)
T 3bxp_A 11 TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ--------S- 81 (277)
T ss_dssp STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC--------C-
T ss_pred cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC--------c-
Confidence 3566788889999731 24567899999999764432 345677888899999999999999943211 1
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhC--------------CCceeEEEecCCccchh
Q 004141 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------------PDKFVAAAARNPLCNLA 654 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--------------p~~~~~~v~~~p~~~~~ 654 (771)
......+|+.++++++.+.. .+++++|+|+|||+||.+++.++.++ +.+++++|+.+|..+..
T Consensus 82 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 161 (277)
T 3bxp_A 82 VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLT 161 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTT
T ss_pred cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCC
Confidence 12235788999999888752 26778999999999999999999885 67899999999987643
Q ss_pred hhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004141 655 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
..... ...+...+. ......+|...+.++.+|+|++||++|.++|+++++.+++.+++.+
T Consensus 162 ~~~~~----~~~~~~~~~----------------~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~ 221 (277)
T 3bxp_A 162 AGFPT----TSAARNQIT----------------TDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQ 221 (277)
T ss_dssp SSSSS----SHHHHHHHC----------------SCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTT
T ss_pred CCCCC----ccccchhcc----------------chhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCC
Confidence 21000 000000000 0223456667777888999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCccCCCCCC--------------hHHHHHHHHHHHHHh
Q 004141 735 VETKVIVFPNDVHGIERPQS--------------DFESFLNIGLWFKKY 769 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~--------------~~~~~~~i~~fl~~~ 769 (771)
.+++++++++++|.+..... ..++++.+.+||+++
T Consensus 222 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 222 VATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp CCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 99999999999997654332 357788999999875
No 21
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=220.72 Aligned_cols=234 Identities=16% Similarity=0.172 Sum_probs=163.9
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004141 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
.+.++++.|+ ..++.|+||++||++.. .+...+..|+++||.|+++||||.++. +........+|
T Consensus 144 ~l~~~l~~P~---~~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~--------~~~~~~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPP---GPGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDL--------PNNMDNISLEY 208 (422)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTS--------CSSCSCEETHH
T ss_pred cEEEEEEcCC---CCCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCC--------CCCcccCCHHH
Confidence 5899999997 45678999999997654 234568889999999999999995443 22233356899
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc---CCCCCcchhh-h--hccC
Q 004141 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG---TTDIPDWCYV-E--SYGS 673 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~---~~~~~~~~~~-~--~~~~ 673 (771)
+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+.+|......... ....+..... . ....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999887888999999999999999999999998 899998888753211000 0000000000 0 0000
Q ss_pred CCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCccCCC
Q 004141 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 751 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~~~~ 751 (771)
.....+.. ...........+....+.++++|+|+++|++|.++|.++. +.+.+.|++.+++ +++++||+++|.+..
T Consensus 288 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~ 365 (422)
T 3k2i_A 288 SGLVDIVD--IRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 365 (422)
T ss_dssp TSCEECTT--CBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCS
T ss_pred chhHHHHH--HHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECC
Confidence 00000000 0000001112233345678899999999999999998866 6899999999988 999999999999732
Q ss_pred C---------------------------CChHHHHHHHHHHHHHhhC
Q 004141 752 P---------------------------QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ~---------------------------~~~~~~~~~i~~fl~~~L~ 771 (771)
+ ....+.++.+++||+++|+
T Consensus 366 p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 366 PYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp TTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 3456789999999999984
No 22
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.90 E-value=1.6e-22 Score=217.60 Aligned_cols=229 Identities=14% Similarity=0.092 Sum_probs=167.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|++ .++.|+||++||++... ..+......|+++||.|+++|+|| +|.+.. ........
T Consensus 135 dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG---~G~s~~---~~~~~~~~ 203 (386)
T 2jbw_A 135 DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTK--EESFQMENLVLDRGMATATFDGPG---QGEMFE---YKRIAGDY 203 (386)
T ss_dssp TTEEEEEEEECCSS---SCCEEEEEEECCSSCCT--TTTHHHHHHHHHTTCEEEEECCTT---SGGGTT---TCCSCSCH
T ss_pred CCEEEEEEEEcCCC---CCCCCEEEEeCCCCccH--HHHHHHHHHHHhCCCEEEEECCCC---CCCCCC---CCCCCccH
Confidence 68999999999984 36789999999976543 234445888899999999999999 444411 11111122
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
.+++.++++++.+++.++.++|+|+|+|+||++++.++.+ |++++++|+. |+.++...... .+. ...... .
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~--~~~-~~~~~~----~ 274 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL--ETP-LTKESW----K 274 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG--SCH-HHHHHH----H
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh--ccH-HHHHHH----H
Confidence 3568888899998877888999999999999999999998 8899999999 88775433220 000 000000 0
Q ss_pred ccCCCCCChhhH-HHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHH-HhCCCCEEEEEeCCCCccCCCCCC
Q 004141 677 DSFTESPSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 677 ~~~~~~~~~~~~-~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
..+......+.. ..+...++...+.++++|+|+++|++|. +|+++++++++.+ +. +++++++++++|.+ ...
T Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~gH~~--~~~ 348 (386)
T 2jbw_A 275 YVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGDHCC--HNL 348 (386)
T ss_dssp HHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCCGGG--GGG
T ss_pred HHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCCcCC--ccc
Confidence 001111112233 4556778888889999999999999999 9999999999988 64 58999999999976 334
Q ss_pred hHHHHHHHHHHHHHhhC
Q 004141 755 DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 755 ~~~~~~~i~~fl~~~L~ 771 (771)
..+++..+.+||+++|+
T Consensus 349 ~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 349 GIRPRLEMADWLYDVLV 365 (386)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 45889999999999874
No 23
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=2e-22 Score=216.09 Aligned_cols=216 Identities=16% Similarity=0.162 Sum_probs=168.2
Q ss_pred ccccC-CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch----------HHHHHHHHCCcEEEEECCCCCCCC
Q 004141 512 NLTKG-AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS----------KSLAFLSSVGYSLLIVNYRGSLGF 580 (771)
Q Consensus 512 ~~~~~-~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~----------~~~~~la~~G~~Vv~~d~rG~~~~ 580 (771)
.+.+. +|.++.+++|.|+++.+.+++|+||++||+++........ ....+....|+.|+++|++|.+++
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 44556 7899999999999766678899999999987553221111 112234577899999999998888
Q ss_pred ChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCC
Q 004141 581 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 660 (771)
Q Consensus 581 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~ 660 (771)
+..+.............+|+.++++++.++..+|++||+|+||||||++++.++.++|++++++++.+|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------- 300 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------- 300 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------
Confidence 7766543333344566889999999999987788999999999999999999999999999999999887410
Q ss_pred CCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCC-CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004141 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
..+..+ .+|+|++||+.|..+|++++++++++|++.|.++++
T Consensus 301 -------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 343 (380)
T 3doh_A 301 -------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRY 343 (380)
T ss_dssp -------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEE
T ss_pred -------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEE
Confidence 111223 389999999999999999999999999999999999
Q ss_pred EEeCCC---CccCCCCCChHHHHH--HHHHHHHHhhC
Q 004141 740 IVFPND---VHGIERPQSDFESFL--NIGLWFKKYCK 771 (771)
Q Consensus 740 ~~~~~~---~H~~~~~~~~~~~~~--~i~~fl~~~L~ 771 (771)
++++++ +|++.........+. .+++||.++.+
T Consensus 344 ~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~~r 380 (380)
T 3doh_A 344 TEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFEQSR 380 (380)
T ss_dssp EEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHTCC-
T ss_pred EEecCCcccCCCCCCchhHHHhcCCHHHHHHHHhhcC
Confidence 999999 454444444456666 89999987643
No 24
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.89 E-value=1.5e-22 Score=215.08 Aligned_cols=237 Identities=19% Similarity=0.222 Sum_probs=159.4
Q ss_pred cccCCCceEEEEEEe-cCCC--------------------CCCCCCcEEEEEcCCCCCCCCCc---chHHHHHHHHC-Cc
Q 004141 513 LTKGAQKPFEAIFVS-SSHK--------------------KDCSCDPLIVVLHGGPHSVSLSS---YSKSLAFLSSV-GY 567 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~-P~~~--------------------~~~~~~p~vv~~HGg~~~~~~~~---~~~~~~~la~~-G~ 567 (771)
+...+| +.+.+|. |... ...++.|+||++|||++...... |...+..|+++ ||
T Consensus 69 ~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~ 146 (365)
T 3ebl_A 69 IDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKG 146 (365)
T ss_dssp EETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTS
T ss_pred ecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCC
Confidence 344556 6667777 8642 23467899999999987544332 45677778775 99
Q ss_pred EEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC----CCCCC-eEEEEEcChhHHHHHHHHhhCCC---
Q 004141 568 SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD--- 639 (771)
Q Consensus 568 ~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-ri~l~G~S~GG~~a~~~a~~~p~--- 639 (771)
.|+++|||+++++. ....++|+.++++|+.++. .+|++ ||+|+|+|+||++|+.++.+.++
T Consensus 147 ~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~ 215 (365)
T 3ebl_A 147 VVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGV 215 (365)
T ss_dssp EEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCC
Confidence 99999999865432 2235799999999999764 57898 99999999999999999987655
Q ss_pred ceeEEEecCCccchhhhhc----CCCCC--cchhhhhccCCCCccCCCCCChhhHHHHhhcCccc-ccCCCC----CcEE
Q 004141 640 KFVAAAARNPLCNLALMVG----TTDIP--DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVK----TPTI 708 (771)
Q Consensus 640 ~~~~~v~~~p~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~----~P~l 708 (771)
.++++|+.+|+++...... ....+ .......+. ..+..... .......+|+. ....++ +|+|
T Consensus 216 ~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~p~~~~~~~l~~~~~pP~L 288 (365)
T 3ebl_A 216 KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYW----KAYLPEDA---DRDHPACNPFGPNGRRLGGLPFAKSL 288 (365)
T ss_dssp CCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHH----HHHSCTTC---CTTSTTTCTTSTTCCCCTTSCCCCEE
T ss_pred ceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHH----HHhCCCCC---CCCCcccCCCCCcchhhccCCCCCEE
Confidence 7999999999876431100 00000 000000000 00000000 00001122332 223333 6899
Q ss_pred EEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC---CCCChHHHHHHHHHHHHHhhC
Q 004141 709 FLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE---RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 709 ii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~fl~~~L~ 771 (771)
|+||+.|..+ .++.+++++|++.|++++++++++++|++. ..+...++++.+.+||+++++
T Consensus 289 i~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 289 IIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp EEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 9999999776 567899999999999999999999999876 234456788999999999875
No 25
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.89 E-value=8e-23 Score=210.00 Aligned_cols=225 Identities=18% Similarity=0.179 Sum_probs=162.4
Q ss_pred cCCCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 515 KGAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~---~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
..+|..+...+| |+.. ...++.|+||++||+++.... ..|...+..|+++||.|+++|+||.+.++
T Consensus 26 ~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~--------- 95 (283)
T 3bjr_A 26 KLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ--------- 95 (283)
T ss_dssp ECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS---------
T ss_pred ecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc---------
Confidence 334555666777 6531 144678999999997753322 34667788899999999999999965432
Q ss_pred CccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhCCCc-------------eeEEEecCCccchh
Q 004141 591 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK-------------FVAAAARNPLCNLA 654 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~-------------~~~~v~~~p~~~~~ 654 (771)
........|+.++++++.+.. .+++++|+|+||||||.+++.++.++|+. ++++|+.+|..+..
T Consensus 96 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 175 (283)
T 3bjr_A 96 PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPL 175 (283)
T ss_dssp SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTT
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccc
Confidence 011234778899999988753 36778999999999999999999999987 89999999987532
Q ss_pred hhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004141 655 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
....... . ....+. ..+...++...+.++.+|+|+++|++|..+|++++..+++.++..+
T Consensus 176 ~~~~~~~-------~-----~~~~~~--------~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g 235 (283)
T 3bjr_A 176 LGFPKDD-------A-----TLATWT--------PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAK 235 (283)
T ss_dssp SBC--------------------CCC--------CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTT
T ss_pred ccccccc-------c-----hHHHHH--------HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCC
Confidence 1100000 0 000000 0133456666778889999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCccCCCCC------------ChHHHHHHHHHHHHHh
Q 004141 735 VETKVIVFPNDVHGIERPQ------------SDFESFLNIGLWFKKY 769 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~fl~~~ 769 (771)
.+++++++++++|.+.... ...++...+.+||+++
T Consensus 236 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 236 IPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 9999999999999764321 2247788999999864
No 26
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.89 E-value=2e-22 Score=220.16 Aligned_cols=234 Identities=14% Similarity=0.171 Sum_probs=161.6
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004141 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
.+.+++|.|+ ..++.|+||++||++.. .+...+..|+++||.|+++||||.++.+ ........+|
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~----~~~~~a~~La~~Gy~Vla~D~rG~~~~~--------~~~~~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGG----LLEYRASLLAGKGFAVMALAYYNYEDLP--------KTMETLHLEY 224 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCS----CCCHHHHHHHTTTCEEEEECCSSSTTSC--------SCCSEEEHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcc----hhhHHHHHHHhCCCEEEEeccCCCCCCC--------cchhhCCHHH
Confidence 5899999997 45678999999997654 2334588899999999999999955432 2233345899
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh---cCCCCCcchh-hh--hccC
Q 004141 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCY-VE--SYGS 673 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~---~~~~~~~~~~-~~--~~~~ 673 (771)
+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+.+|........ .....+.... .. ....
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999888888999999999999999999999988 89999888865321100 0000000000 00 0000
Q ss_pred CCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCccCCC
Q 004141 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 751 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~~~~ 751 (771)
.....+.. ................+.++++|+|+++|++|.++|.++. ..+++.|++.|.+ +++++||+++|.+..
T Consensus 304 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 304 DGYADIVD--VLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp SSCEECTT--CBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred chHHHHHH--HHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 00000000 0000000111122233677889999999999999998554 7899999999988 899999999998831
Q ss_pred ---------------------------CCChHHHHHHHHHHHHHhhC
Q 004141 752 ---------------------------PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ---------------------------~~~~~~~~~~i~~fl~~~L~ 771 (771)
.....+.++.+++||+++|+
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11256789999999999984
No 27
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.89 E-value=2.1e-22 Score=212.51 Aligned_cols=241 Identities=14% Similarity=0.169 Sum_probs=168.4
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcC-C--
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-P-- 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~-~-- 589 (771)
+...+|.++.++++.|++. .++.|+||++||++.... +......|+++||.|+++|+||.++++....... +
T Consensus 73 ~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~ 147 (337)
T 1vlq_A 73 FSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEG 147 (337)
T ss_dssp EECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSS
T ss_pred EEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---CchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccc
Confidence 4445688999999999742 567899999999876532 3334457788999999999999775432100000 0
Q ss_pred ---CCc---------------cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 590 ---GKV---------------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 590 ---~~~---------------~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
..+ ....++|+.++++++.+++.+|+++|+|+|+|+||.+++.++.++| .++++|+.+|..
T Consensus 148 ~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~ 226 (337)
T 1vlq_A 148 PVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFL 226 (337)
T ss_dssp SBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCS
T ss_pred cCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcc
Confidence 000 0134789999999999987788899999999999999999999988 588999888854
Q ss_pred c-hhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004141 652 N-LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 652 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l 730 (771)
. ...+........+.....+.. .. ..........+...+|...+.++++|+|+++|+.|.++|++++.++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l 301 (337)
T 1vlq_A 227 CHFRRAVQLVDTHPYAEITNFLK----TH-RDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYY 301 (337)
T ss_dssp CCHHHHHHHCCCTTHHHHHHHHH----HC-TTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred cCHHHHHhcCCCcchHHHHHHHH----hC-chhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhc
Confidence 3 322221111111111000000 00 00011222334456777788899999999999999999999999998887
Q ss_pred HhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 731 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+. +++++++++++|.+. ..+....+.+||.++|+
T Consensus 302 ~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 302 AG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp CS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred CC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 64 589999999999863 34677899999999874
No 28
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.88 E-value=6e-22 Score=195.24 Aligned_cols=201 Identities=20% Similarity=0.247 Sum_probs=156.0
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC--C-Ccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--G-KVG 593 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~--~-~~~ 593 (771)
+|.++.++++.|.+ +.|+||++||++.......+...+..|+++||.|+++|+|| +|.+...... . ...
T Consensus 20 ~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLT---QEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSC---HHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCC---cCCCCccchhhcccCcH
Confidence 68899999999863 57999999997765433234567888999999999999998 5544322111 0 111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
....+|+.++++++..++.++.++++++|||+||.+++.++.++|++++++|+.+|..+..
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------- 152 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------------
Confidence 2236788899999988877888999999999999999999999999999999998864310
Q ss_pred CCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC
Q 004141 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 753 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 753 (771)
...+.++++|+|+++|++|..+|.+. .+.+.+.+.+++++++++++|.+..++
T Consensus 153 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~~~~~ 205 (223)
T 2o2g_A 153 -----------------------PSALPHVKAPTLLIVGGYDLPVIAMN----EDALEQLQTSKRLVIIPRASHLFEEPG 205 (223)
T ss_dssp -----------------------TTTGGGCCSCEEEEEETTCHHHHHHH----HHHHHHCCSSEEEEEETTCCTTCCSTT
T ss_pred -----------------------HHHHhcCCCCEEEEEccccCCCCHHH----HHHHHhhCCCeEEEEeCCCCcccCChH
Confidence 02345577999999999999997332 344555667899999999999977666
Q ss_pred ChHHHHHHHHHHHHHhhC
Q 004141 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~fl~~~L~ 771 (771)
...++.+.+.+||+++|+
T Consensus 206 ~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 206 ALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 667889999999999986
No 29
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.88 E-value=2.4e-22 Score=204.65 Aligned_cols=241 Identities=10% Similarity=0.051 Sum_probs=163.4
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.+++++++.|. ..+.|+||++||++.......|...+..|+++||.|+++|+||.+....... . ...
T Consensus 27 ~~~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~-~~~ 98 (270)
T 3pfb_A 27 LERDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE---N-MTV 98 (270)
T ss_dssp EEETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG---G-CCH
T ss_pred eccCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC---c-cCH
Confidence 3457899999999886 2357999999998766434456778889999999999999999544322110 0 111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
....+|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++|+.+|.................+......
T Consensus 99 ~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3pfb_A 99 LNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIP 176 (270)
T ss_dssp HHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCC
T ss_pred HHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCccccc
Confidence 223678888899887763 346999999999999999999999999999999999876543211000000000000000
Q ss_pred CCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC
Q 004141 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 753 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 753 (771)
.................+........+.++++|+|+++|++|..+|++.+..+.+.+. +++++++++++|.+. .+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~ 251 (270)
T 3pfb_A 177 DRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ----NSTLHLIEGADHCFS-DS 251 (270)
T ss_dssp SEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEETTCCTTCC-TH
T ss_pred ccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC----CCeEEEcCCCCcccC-cc
Confidence 0000000000011223334445556788899999999999999999999888877753 489999999999876 44
Q ss_pred ChHHHHHHHHHHHHHh
Q 004141 754 SDFESFLNIGLWFKKY 769 (771)
Q Consensus 754 ~~~~~~~~i~~fl~~~ 769 (771)
...++.+.+.+||+++
T Consensus 252 ~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 252 YQKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred chHHHHHHHHHHHhhc
Confidence 4567888899998764
No 30
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.88 E-value=7.4e-22 Score=207.15 Aligned_cols=226 Identities=15% Similarity=0.207 Sum_probs=161.1
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
+...+| ++.+++|.|.+ ...|+||++|||++... ...+...+..|++ .||.|+++|||+++++.
T Consensus 68 ~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~--------- 133 (326)
T 3ga7_A 68 VPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR--------- 133 (326)
T ss_dssp ECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC---------
T ss_pred eecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC---------
Confidence 344456 89999999973 22399999999885432 3456677888877 89999999999866542
Q ss_pred CccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhCCCc------eeEEEecCCccchhhhhcCCC
Q 004141 591 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK------FVAAAARNPLCNLALMVGTTD 661 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~------~~~~v~~~p~~~~~~~~~~~~ 661 (771)
....++|+.++++|+.++. .+|++||+|+|+|+||++++.++.++++. ++++++.+|+.+......
T Consensus 134 --~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~--- 208 (326)
T 3ga7_A 134 --YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVS--- 208 (326)
T ss_dssp --TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHH---
T ss_pred --CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChh---
Confidence 2234789999999999863 47899999999999999999999877654 899999999865421100
Q ss_pred CCcchhhhhccCCCCccCCCCCChhhHHHH---------hhcCcc-----cccCCCCCcEEEEeeCCCCccCcHHHHHHH
Q 004141 662 IPDWCYVESYGSKGKDSFTESPSVEDLTRF---------HSKSPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQYA 727 (771)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~sp~-----~~~~~i~~P~lii~G~~D~~vp~~~~~~~~ 727 (771)
...+... .. .........+ ...+|. ..+.+..+|+||+||+.|+++ .++..++
T Consensus 209 ------~~~~~~~----~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~ 275 (326)
T 3ga7_A 209 ------RRLFGGA----WD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLH 275 (326)
T ss_dssp ------HHHCCCT----TT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHH
T ss_pred ------HhhhcCC----CC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHH
Confidence 0000000 00 0000000000 011221 123345679999999999998 5889999
Q ss_pred HHHHhCCCCEEEEEeCCCCccCCCCC----ChHHHHHHHHHHHHHhh
Q 004141 728 RALREKGVETKVIVFPNDVHGIERPQ----SDFESFLNIGLWFKKYC 770 (771)
Q Consensus 728 ~~l~~~g~~~~~~~~~~~~H~~~~~~----~~~~~~~~i~~fl~~~L 770 (771)
++|++.|+++++++|++++|++.... ...++++.+.+||+++|
T Consensus 276 ~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 276 QTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999985322 34678899999999987
No 31
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.88 E-value=5.3e-22 Score=203.44 Aligned_cols=222 Identities=18% Similarity=0.206 Sum_probs=148.2
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..+.||++||.+.+ ...|...++.|+++||.|+++|+|| ||.+........ ....++|+.++++++.+.
T Consensus 49 G~~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~G---hG~S~~~~~~~~-~~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTG---HGTTPAEMAAST-ASDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTT---SSSCHHHHHTCC-HHHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCC---CCCCCccccCCC-HHHHHHHHHHHHHHHHhC----
Confidence 345679999996654 4468889999999999999999999 555432211111 112267888888888765
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh-----hcCCCCCcch--hhhhccCCCCccCC--CCCCh
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTTDIPDWC--YVESYGSKGKDSFT--ESPSV 685 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~ 685 (771)
.++++|+||||||.+++.++.++|++++++|+.+|....... .......... .............. ..+ .
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 197 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTP-V 197 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEE-G
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCc-h
Confidence 368999999999999999999999999999999987643211 0000000000 00000000000000 000 0
Q ss_pred hhHHHHhh--cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHH
Q 004141 686 EDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 763 (771)
Q Consensus 686 ~~~~~~~~--~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 763 (771)
.....+.. ......+.++++|+|+++|++|.++|++.++.+++.+.. .++++++++++||.+........+.+.|.
T Consensus 198 ~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 01111110 011234678999999999999999999999999887753 45899999999998766555668899999
Q ss_pred HHHHHh
Q 004141 764 LWFKKY 769 (771)
Q Consensus 764 ~fl~~~ 769 (771)
+||++|
T Consensus 276 ~FL~~H 281 (281)
T 4fbl_A 276 AFIRKH 281 (281)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999986
No 32
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.88 E-value=2.9e-21 Score=194.25 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=157.2
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC---CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~---~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
...+| ++.++++.|. .++.|+||++||.+.... ...+...+..|+++||.|+++|+||.+..... .
T Consensus 29 ~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~------~ 97 (249)
T 2i3d_A 29 NGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE------F 97 (249)
T ss_dssp EETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC------C
T ss_pred ECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC------C
Confidence 34455 8999988875 356799999999643221 12346678889999999999999995432211 1
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.......+|+.++++++.++. .+.++++|+|||+||.+++.++.++|+ ++++|+.+|..+...
T Consensus 98 ~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------------- 160 (249)
T 2i3d_A 98 DHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--------------- 160 (249)
T ss_dssp CSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---------------
T ss_pred CCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---------------
Confidence 122334689999999998875 477799999999999999999999998 999999988753110
Q ss_pred ccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHh-CCCCEEEEEeCCCCccC
Q 004141 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE-KGVETKVIVFPNDVHGI 749 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~ 749 (771)
...+.++++|+|+++|++|..+|++.++++++.+.. .+.+++++++++++|.+
T Consensus 161 --------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 214 (249)
T 2i3d_A 161 --------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFF 214 (249)
T ss_dssp --------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTC
T ss_pred --------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCccc
Confidence 122456789999999999999999999999999986 45679999999999987
Q ss_pred CCCCChHHHHHHHHHHHHHhhC
Q 004141 750 ERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
. ....++++.+.+||+++++
T Consensus 215 ~--~~~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 215 N--GKVDELMGECEDYLDRRLN 234 (249)
T ss_dssp T--TCHHHHHHHHHHHHHHHHT
T ss_pred c--cCHHHHHHHHHHHHHHhcC
Confidence 6 3566889999999998863
No 33
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=2.7e-21 Score=226.39 Aligned_cols=309 Identities=12% Similarity=0.086 Sum_probs=196.0
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeec-CCccccccceEEEeCCCCCeEEEEecCCC---
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWA-PFPVEMTGASAVVPSPSGSKLLVVRNPEN--- 121 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~-~~~~~~~~~~~~~~SPdG~~la~~~~~~~--- 121 (771)
.+.+++||+.++.. + +.|+++++.++ +..++... .+.........++|||||++|||..+...
T Consensus 21 ~~~w~~dg~~~~~~----~-------~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ----E-------NNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CEEECSSSEEEEEE----T-------TEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred ccEECCCCcEEEEc----C-------CcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 45567899755542 2 36778776433 33333222 11111111234899999999999886421
Q ss_pred --CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCC
Q 004141 122 --ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSW 198 (771)
Q Consensus 122 --~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (771)
....+++++ .+++.++++..... ...++|||||++|||++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~l~~~~~~----------~~~~~~SPdG~~la~~~--------------------------- 130 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLITEERIPNN----------TQWVTWSPVGHKLAYVW--------------------------- 130 (740)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCTT----------EEEEEECSSTTCEEEEE---------------------------
T ss_pred EccceEEEEEECCCCcEEEcccCCCc----------ceeeEECCCCCEEEEEE---------------------------
Confidence 113456655 45554443332222 25899999999999973
Q ss_pred CCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC------------------ccceEEEecCCCCCccEEEE
Q 004141 199 KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 199 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~------------------~~~~~~wspDg~~~~~~l~~ 260 (771)
+.+||++|+.+++.++++ ..+.. ....+.|||||+. |+|
T Consensus 131 ------------------~~~i~~~~~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~----la~ 187 (740)
T 4a5s_A 131 ------------------NNDIYVKIEPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF----LAY 187 (740)
T ss_dssp ------------------TTEEEEESSTTSCCEECC-SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE----EEE
T ss_pred ------------------CCeEEEEECCCCceEEEc-CCCCccceecCcccccccchhcCCCcceEECCCCCE----EEE
Confidence 257999999999988884 11111 1135899999999 999
Q ss_pred EeecCccee-----------------eeeeeec----cCCceeEEEecccccchhhhhhhhcCCCCC---C---cceecC
Q 004141 261 VGWSSETRK-----------------LGIKYCY----NRPCALYAVRVSLYKSEASELELKESSSED---L---PVVNLT 313 (771)
Q Consensus 261 ~~~~~~~~~-----------------~g~~~~~----~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~~lt 313 (771)
.+......+ ..+.|.. +....|+++|+ ++ + ..++|+
T Consensus 188 ~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~-----------------~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 188 AQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT-----------------DSLSSVTNATSIQIT 250 (740)
T ss_dssp EEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET-----------------TSCCSSSCCCEEEEC
T ss_pred EEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC-----------------CCCCCCCcceEEEec
Confidence 875433111 0011100 12236899998 66 5 556665
Q ss_pred C------CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC----C---CCCccceeeEEecccccCC
Q 004141 314 E------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG----N---FSSLEKIVDVIPVVQCAEG 380 (771)
Q Consensus 314 ~------~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~----~---~~~~~~~~~~~~~~~~~~~ 380 (771)
. +...+.+|+|||||+.+++..++. .....|+++|+.+++ . ..+.... .+
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-------~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~----------~~ 313 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRI-------QNYSVMDICDYDESSGRWNCLVARQHIEMS----------TT 313 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESS-------TTEEEEEEEEEETTTTEEEECGGGCEEEEC----------SS
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-------CCEEEEEEEECCCCccccceeEEEEeeecc----------CC
Confidence 4 455688999999999888887764 234679999998877 1 1111000 00
Q ss_pred CCCcccccC--CCCCCccccCCCEEE-EEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeC---C
Q 004141 381 DCFPGLYSS--SILSNPWLSDGCTML-LSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---P 454 (771)
Q Consensus 381 ~~f~g~~~~--~~~~~~~s~Dg~~l~-~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~---~ 454 (771)
. |.. ....+.|||||+.|+ +.+..++..+||.+++++++.++|+.....+. ..+++|++.|+|+++. .
T Consensus 314 ~-----~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~-~~~~~d~~~i~f~~~~~~~~ 387 (740)
T 4a5s_A 314 G-----WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVI-GIEALTSDYLYYISNEYKGM 387 (740)
T ss_dssp S-----CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEE-EEEEECSSEEEEEESCGGGC
T ss_pred c-----eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEE-EEEEEeCCEEEEEEecCCCC
Confidence 0 000 124688999999988 66667788899999999999999998765433 3445779999998865 1
Q ss_pred CCCCeEEEEEecc
Q 004141 455 VDVPQVKYGYFVD 467 (771)
Q Consensus 455 ~~p~~l~~~~~~~ 467 (771)
..-..||++++.+
T Consensus 388 ~~~~~ly~v~~~g 400 (740)
T 4a5s_A 388 PGGRNLYKIQLID 400 (740)
T ss_dssp TTCBEEEEEETTE
T ss_pred CceeEEEEEECCC
Confidence 2335688877654
No 34
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=1.3e-21 Score=207.16 Aligned_cols=318 Identities=13% Similarity=0.137 Sum_probs=201.8
Q ss_pred HHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCC
Q 004141 32 QDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGS 111 (771)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~ 111 (771)
++|..++.+....+ ||++|+|+....+...+.....||++++. +++.+++ ..+..++|||||+
T Consensus 9 ~~l~~~~~~~~~~~------dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l---------~~~~~~~~SpDg~ 71 (347)
T 2gop_A 9 KTFAKFAYLSDPRT------KGELVAYVLTKANLKDNKYENTIVIENLK--NNARRFI---------ENATMPRISPDGK 71 (347)
T ss_dssp -CCCCSCEEEEEEE------ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCEEEE---------ESCEEEEECTTSS
T ss_pred ccceeeEEcccceE------CCcEEEEEEeecCcccCCccceEEEEeCC--CCceEEc---------ccCCCeEECCCCC
Confidence 45556666655444 89999999877665556667889998764 3345555 2367899999999
Q ss_pred eEEEEecCCC-CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC
Q 004141 112 KLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 189 (771)
Q Consensus 112 ~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 189 (771)
+|||++...+ +..++|.++ .+++.++++.... . ..+.|||||++|+|.+.......
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~----------~~~~wspdg~~l~~~~~~~~~~~----------- 129 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-I----------RSLEWNEDSRKLLIVGFKRREDE----------- 129 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-E----------EEEEECTTSSEEEEEEECCCC-------------
T ss_pred EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-c----------cceeECCCCCEEEEEEccCCCcC-----------
Confidence 9999987542 445688888 6677777776543 3 58999999999999975421100
Q ss_pred CCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcce
Q 004141 190 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETR 268 (771)
Q Consensus 190 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~ 268 (771)
.........|..+ |..+......+||++|+.+++. +.++ . . .+..+.||||| . ++... .....
T Consensus 130 -----~~~~~~~~~~~~~-g~~~~~~~~~~l~~~d~~~~~~~~~l~--~-~-~~~~~~~spdg-~----~~~~~-~~~~~ 193 (347)
T 2gop_A 130 -----DFIFEDDVPAWFD-DLGFFDGEKTTFWIFDTESEEVIEEFE--K-P-RFSSGIWHRDK-I----VVNVP-HREII 193 (347)
T ss_dssp ------------CCCC----------CEEEEEEEETTTTEEEEEEE--E-E-TTCEEEEETTE-E----EEEEE-CCCSS
T ss_pred -----CcEEEcccceeec-CcccccCccceEEEEECCCCeEEeeec--C-C-CcccccCCCCe-E----EEEEe-ccccc
Confidence 0000011112222 2222223457899999999988 7773 3 3 77899999998 5 54443 22100
Q ss_pred eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCcccc
Q 004141 269 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 348 (771)
Q Consensus 269 ~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~ 348 (771)
. +.....+||.+| . ++.++|+.. .....+ ||||++|+|.+.... ......
T Consensus 194 ~-----~~~~~~~l~~~d-~------------------~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~---~~~~~~ 243 (347)
T 2gop_A 194 P-----QYFKFWDIYIWE-D------------------GKEEKMFEK-VSFYAV--DSDGERILLYGKPEK---KYMSEH 243 (347)
T ss_dssp C-----CSSCCEEEEEEE-T------------------TEEEEEEEE-ESEEEE--EECSSCEEEEECCSS---SCCCSS
T ss_pred c-----cccccccEEEeC-C------------------CceEEeccC-cceeeE--CCCCCEEEEEEcccc---CCcccc
Confidence 0 000134788887 2 455666655 444444 999999999987642 111234
Q ss_pred ccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC-CccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004141 349 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 349 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~-~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
.+||++| +++.+.++..... .+.. +.|+ || +++....++...|| ++ +|+.++
T Consensus 244 ~~l~~~d--~~~~~~l~~~~~~-------------------~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~--~g~~~~ 296 (347)
T 2gop_A 244 NKLYIYD--GKEVMGILDEVDR-------------------GVGQAKIKD-GK--VYFTLFEEGSVNLY-IW--DGEIKP 296 (347)
T ss_dssp CEEEEEC--SSCEEESSTTCCS-------------------EEEEEEEET-TE--EEEEEEETTEEEEE-EE--SSSEEE
T ss_pred ceEEEEC--CCceEeccccCCc-------------------ccCCccEEc-Cc--EEEEEecCCcEEEE-Ec--CCceEE
Confidence 6799998 4444444332110 1223 6799 87 77888888888999 99 577777
Q ss_pred ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004141 428 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 428 l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~ 464 (771)
++.....+....+++ .++++.++...|++||+.+
T Consensus 297 ~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 297 IAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred EecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 776544344445555 5888888999999999986
No 35
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.88 E-value=4.9e-22 Score=197.90 Aligned_cols=208 Identities=18% Similarity=0.152 Sum_probs=157.7
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhc-----
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS----- 587 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~----- 587 (771)
+...+|.++.++++.|. .++.|+||++||.+.. ...+...+..|+++||.|+++|+||.+..+......
T Consensus 8 ~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 81 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQR 81 (236)
T ss_dssp EECTTSCEECEEEECCS----SCSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHH
T ss_pred EecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhh
Confidence 44567889999999886 3568999999997654 336777888999999999999999855443210000
Q ss_pred ------CCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC
Q 004141 588 ------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD 661 (771)
Q Consensus 588 ------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~ 661 (771)
..........+|+.++++++.++..++ ++++|+|||+||.+++.++.++| ++++++.+|....
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~-------- 150 (236)
T 1zi8_A 82 EQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE-------- 150 (236)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG--------
T ss_pred hhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc--------
Confidence 000011223678889999988775444 69999999999999999999988 8888877664210
Q ss_pred CCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 662 IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
++...+.++++|+|+++|++|..+|++.++.+++.++..+ ++++++
T Consensus 151 ---------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~ 196 (236)
T 1zi8_A 151 ---------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHW 196 (236)
T ss_dssp ---------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEE
T ss_pred ---------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEE
Confidence 1233456778999999999999999999999999997655 799999
Q ss_pred eCCCCccCCCCCC-------hHHHHHHHHHHHHHhhC
Q 004141 742 FPNDVHGIERPQS-------DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 742 ~~~~~H~~~~~~~-------~~~~~~~i~~fl~~~L~ 771 (771)
+++++|.+..... ..+.++.+.+||+++|+
T Consensus 197 ~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 197 YEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp ETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred ECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 9999998775432 34688999999998874
No 36
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.88 E-value=8.3e-22 Score=206.02 Aligned_cols=224 Identities=17% Similarity=0.255 Sum_probs=157.9
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004141 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+.+++|.|+ ..++.|+||++|||++..... .+...+..|+. .||.|+++|||+++++. ....+
T Consensus 66 ~i~~~~~~p~---~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAP---GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAAV 131 (322)
T ss_dssp TEEEEEEECT---TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred CeEEEEEeCC---CCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcHH
Confidence 3788899997 345789999999988654332 44556666665 69999999999866532 23357
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004141 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
+|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+.+|+.+...... .+ ......
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~--~~~~~~ 203 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND-----SF--KTRAEA 203 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT-----HH--HHTTTT
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc-----CH--HHhCcc
Confidence 9999999999998 57999999999999999999999876554 899999999987532100 00 000000
Q ss_pred CCCccCCCCCChh-hHHH--------HhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 674 KGKDSFTESPSVE-DLTR--------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 674 ~~~~~~~~~~~~~-~~~~--------~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
..+....... .... ....+|....-...+|+||++|+.|.++ .++..++++|++.|+++++++|++
T Consensus 204 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g 278 (322)
T 3fak_A 204 ---DPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDD 278 (322)
T ss_dssp ---CCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred ---CcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 0000000000 0000 1123444322222369999999999885 688999999999999999999999
Q ss_pred CCccCCC----CCChHHHHHHHHHHHHHhh
Q 004141 745 DVHGIER----PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~----~~~~~~~~~~i~~fl~~~L 770 (771)
++|++.. .+...++++.+.+||+++|
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 9998753 2234678899999999887
No 37
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=1.1e-20 Score=204.95 Aligned_cols=243 Identities=17% Similarity=0.155 Sum_probs=183.1
Q ss_pred CCCCeEEEEecCCCCC--CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004141 108 PSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 108 PdG~~la~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
+.+++++|++...++. ..++..+ +++..+.++.....+ .+++|||||++|+|.+.+.
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v----------~~~~~Spdg~~la~~s~~~---------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES---------- 200 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCE----------EEEEECTTSSEEEEEECTT----------
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcc----------eeeEEcCCCCEEEEEEecC----------
Confidence 4588999998764221 4566555 544555555443333 5899999999999987542
Q ss_pred CCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeec
Q 004141 185 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
+...|++||+.+++.+.+ ......+..++|||||+. |+|++..
T Consensus 201 -------------------------------~~~~i~~~d~~tg~~~~l--~~~~~~~~~~~~spdg~~----la~~~~~ 243 (415)
T 2hqs_A 201 -------------------------------GRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK----LAFALSK 243 (415)
T ss_dssp -------------------------------SSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTSSE----EEEEECT
T ss_pred -------------------------------CCcEEEEEECCCCcEEEe--ecCCCcccCEEEcCCCCE----EEEEEec
Confidence 236899999999998888 444456789999999999 9988632
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004141 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
+....||++|+ .+++.++++.+...+..+.|||||++|+|.+.+. |
T Consensus 244 ------------~g~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~----g- 289 (415)
T 2hqs_A 244 ------------TGSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA----G- 289 (415)
T ss_dssp ------------TSSCEEEEEET-----------------TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT----S-
T ss_pred ------------CCCceEEEEEC-----------------CCCCEEeCcCCCCcccceEECCCCCEEEEEECCC----C-
Confidence 22347999998 7788888988887889999999999999998653 2
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004141 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+||++|+.+++.+.++.... ....++|||||+.|++.+..++...|+.+|+++++
T Consensus 290 ---~~~i~~~d~~~~~~~~l~~~~~--------------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 290 ---RPQVYKVNINGGAPQRITWEGS--------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ---SCEEEEEETTSSCCEECCCSSS--------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ---CcEEEEEECCCCCEEEEecCCC--------------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 4579999998876544432211 12356899999999988877677889999999999
Q ss_pred EEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 425 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 425 ~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
.+.++... ....+.|+|||+.|++...... ...||+.++.
T Consensus 347 ~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~ 386 (415)
T 2hqs_A 347 VQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTD 386 (415)
T ss_dssp EEECCCSS-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETT
T ss_pred EEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECC
Confidence 98887654 5667899999999988776443 4578888765
No 38
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.88 E-value=2.7e-22 Score=212.51 Aligned_cols=241 Identities=14% Similarity=0.133 Sum_probs=165.4
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC-
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG- 590 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~- 590 (771)
.+...+|.++.++++.|++ .++.|+||++||+++... .|.... .++++||.|+++|+||.++++.........
T Consensus 86 ~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~--~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~ 159 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSG--DWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT 159 (346)
T ss_dssp EEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSC--CSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCSSCC
T ss_pred EEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCC--Chhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccCCCC
Confidence 4455578899999999983 567899999999876643 344333 567899999999999976554332110000
Q ss_pred -----------Cc----cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccch-h
Q 004141 591 -----------KV----GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A 654 (771)
Q Consensus 591 -----------~~----~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~-~ 654 (771)
.. ....++|+.++++++.....+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|.... .
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~ 238 (346)
T 3fcy_A 160 LNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYK 238 (346)
T ss_dssp SBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHH
T ss_pred cCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHH
Confidence 00 01125899999999988877888999999999999999999999998 9999999997532 2
Q ss_pred hhhcCC-CCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004141 655 LMVGTT-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 655 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
...... ....+.....+... ..............+...++...+.++++|+|+++|+.|.++|++.+.++++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 315 (346)
T 3fcy_A 239 RVWDLDLAKNAYQEITDYFRL--FDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS- 315 (346)
T ss_dssp HHHHTTCCCGGGHHHHHHHHH--HCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-
T ss_pred HHhhccccccchHHHHHHHHh--cCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-
Confidence 221111 11111000000000 00000011222333444566677888999999999999999999988888776653
Q ss_pred CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 734 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++++++++++|.+. .++.+.+.+||++.
T Consensus 316 --~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 316 --KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp --SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred --CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 689999999999886 35678999999864
No 39
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.87 E-value=1.3e-22 Score=209.14 Aligned_cols=228 Identities=17% Similarity=0.198 Sum_probs=164.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|. +.|+||++||++.. ...|...+..|+++||.|+++|+|| +|.+...... ......
T Consensus 14 ~g~~l~~~~~~p~------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~g~s~~~~~~-~~~~~~ 81 (290)
T 3ksr_A 14 GQDELSGTLLTPT------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRG---HEGYASMRQS-VTRAQN 81 (290)
T ss_dssp TTEEEEEEEEEEE------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTT---SGGGGGGTTT-CBHHHH
T ss_pred CCeEEEEEEecCC------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCC---CCCCCCCccc-ccHHHH
Confidence 5789999999985 67999999998765 4467788899999999999999999 4444322111 112234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
.+|+.++++++.+++.++.++|+|+|||+||.+++.++.++| ++++++.+|........ ..+...... ....
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~---~~~~~~~~~---~~~~ 153 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW---DQPKVSLNA---DPDL 153 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT---TSBHHHHHH---STTH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh---hcccccccC---Chhh
Confidence 689999999999887778889999999999999999999887 77888888865422110 000000000 0000
Q ss_pred ccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004141 677 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
..+..... .....++...+.++++|+|+++|+.|..+++++++.+++.+...+ +++++++++++|.+.......
T Consensus 154 ~~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 227 (290)
T 3ksr_A 154 MDYRRRAL-----APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKEHQQ 227 (290)
T ss_dssp HHHTTSCC-----CGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHHHHH
T ss_pred hhhhhhhh-----hhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcchHHH
Confidence 00000000 011122334456788999999999999999999999999987765 789999999999887665666
Q ss_pred HHHHHHHHHHHHhh
Q 004141 757 ESFLNIGLWFKKYC 770 (771)
Q Consensus 757 ~~~~~i~~fl~~~L 770 (771)
.++..+.+||++++
T Consensus 228 ~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 228 EYTRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88899999999875
No 40
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=1.5e-20 Score=220.75 Aligned_cols=322 Identities=13% Similarity=0.091 Sum_probs=206.4
Q ss_pred HHhhcCccccc-eEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcc--------c-----
Q 004141 32 QDFTNISSIDK-AWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPV--------E----- 97 (771)
Q Consensus 32 ~~~~~~~~~~~-~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~--------~----- 97 (771)
+++.+-+.+.. ....+..|+||++|+|..... .+.....||++++.+ ++.++++...-.. +
T Consensus 26 ~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (741)
T 2ecf_A 26 EAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARR 100 (741)
T ss_dssp HHHTSSSCTTCCCCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTT--CCEEEEECGGGTC--------------
T ss_pred HHHhccCCcCCCCCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhh
Confidence 34443333333 344667789999999986421 112245888887643 3444444321000 0
Q ss_pred -------cccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCC---cceEEEecCCcccccccCCCcccceeecCCCCe
Q 004141 98 -------MTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVHGSVYADGWFEGISWNSDETL 166 (771)
Q Consensus 98 -------~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~ 166 (771)
...+..++|||||++|+|.+. ..+++++ .++ ..++++...... ..++|||||++
T Consensus 101 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~~~~~~~----------~~~~~SPDG~~ 165 (741)
T 2ecf_A 101 ERQRIAAMTGIVDYQWSPDAQRLLFPLG-----GELYLYDLKQEGKAAVRQLTHGEGFA----------TDAKLSPKGGF 165 (741)
T ss_dssp ------CCEESCCCEECTTSSEEEEEET-----TEEEEEESSSCSTTSCCBCCCSSSCE----------EEEEECTTSSE
T ss_pred hhhhhccccCcceeEECCCCCEEEEEeC-----CcEEEEECCCCCcceEEEcccCCccc----------ccccCCCCCCE
Confidence 012578999999999999876 3577666 455 444444332222 58999999999
Q ss_pred EEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCc-----
Q 004141 167 IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS----- 241 (771)
Q Consensus 167 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~----- 241 (771)
|||+++ ..|++||+.+++.++++ .....
T Consensus 166 la~~~~---------------------------------------------~~i~~~d~~~g~~~~~~--~~~~~~~~~g 198 (741)
T 2ecf_A 166 VSFIRG---------------------------------------------RNLWVIDLASGRQMQLT--ADGSTTIGNG 198 (741)
T ss_dssp EEEEET---------------------------------------------TEEEEEETTTTEEEECC--CCCCSSEEES
T ss_pred EEEEeC---------------------------------------------CcEEEEecCCCCEEEec--cCCccceecc
Confidence 999731 47999999999988883 32211
Q ss_pred ------------cceEEEecCCCCCccEEEEEeecCccee--------------eeeeee----ccCCceeEEEeccccc
Q 004141 242 ------------VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYK 291 (771)
Q Consensus 242 ------------~~~~~wspDg~~~~~~l~~~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~ 291 (771)
+..+.|||||+. |+|.+....... ....|. .+....||++|+
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---- 270 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSA----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---- 270 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSC----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS----
T ss_pred ccceeeeeccccccceEECCCCCE----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC----
Confidence 467999999999 999875432110 000010 012237999998
Q ss_pred chhhhhhhhcCCCCC-CcceecCC---CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004141 292 SEASELELKESSSED-LPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~-~~~~~lt~---~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
.+ ++.+.+.. ....+..++| |||++|++...... .....|+++|+.+++.+.+...
T Consensus 271 -------------~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~------~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 271 -------------AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD------QKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp -------------STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT------SSEEEEEEEETTTCCEEEEEEE
T ss_pred -------------CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc------CCeEEEEEEECCCCceEEEEEc
Confidence 77 77666653 3455788999 99999999886431 2356899999988765433221
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceee-EEeecCCE
Q 004141 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS-LLTLDGDN 446 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~-~~s~dg~~ 446 (771)
.. .. |......+.|||||+ +++++..++..+||.++++++ .+.++.....+... .|++||+.
T Consensus 331 ~~----------~~-----~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~ 393 (741)
T 2ecf_A 331 TS----------PT-----WVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGL 393 (741)
T ss_dssp EC----------SS-----CCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTE
T ss_pred CC----------CC-----cCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCE
Confidence 10 00 101235789999999 777777777889999998766 88887765544444 59999999
Q ss_pred EEEEEeCCCC-CCeEEEEEe
Q 004141 447 IIAVSSSPVD-VPQVKYGYF 465 (771)
Q Consensus 447 l~~~~~~~~~-p~~l~~~~~ 465 (771)
|++..+.... ..+||..+.
T Consensus 394 l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 394 AYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEEECSSCTTCBEEEEEET
T ss_pred EEEEEeCCCCceEEEEEEEc
Confidence 9887754321 344666554
No 41
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=6e-21 Score=202.39 Aligned_cols=228 Identities=17% Similarity=0.202 Sum_probs=158.9
Q ss_pred CceEEEEEEecCCCC--------------CCCCCcEEEEEcCCCCCCCCCc---chHHHHHHH-HCCcEEEEECCCCCCC
Q 004141 518 QKPFEAIFVSSSHKK--------------DCSCDPLIVVLHGGPHSVSLSS---YSKSLAFLS-SVGYSLLIVNYRGSLG 579 (771)
Q Consensus 518 g~~l~~~~~~P~~~~--------------~~~~~p~vv~~HGg~~~~~~~~---~~~~~~~la-~~G~~Vv~~d~rG~~~ 579 (771)
+..+.+.+|.|++.. ..++.|+||++|||++...... |...+..|+ +.||.|+++||||+++
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 445777899997542 2467899999999886543332 666778888 7899999999999654
Q ss_pred CChhhhhcCCCCccccchhhHHHHHHHHHHcC----CCCCC-eEEEEEcChhHHHHHHHHhhCCC---ceeEEEecCCcc
Q 004141 580 FGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 651 (771)
Q Consensus 580 ~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-ri~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~p~~ 651 (771)
+. ....++|+.++++++.++. .+|++ ||+|+|||+||.+++.++.++|+ +++++|+.+|+.
T Consensus 160 ~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~ 228 (351)
T 2zsh_A 160 NP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMF 228 (351)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCC
T ss_pred CC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCcc
Confidence 31 1235789999999998753 47889 99999999999999999998888 899999999987
Q ss_pred chhhhhc----CCCCC--cch----hhhhccCCCCccCCCCCChhhHHHHhhcCcc----cccCCCCC-cEEEEeeCCCC
Q 004141 652 NLALMVG----TTDIP--DWC----YVESYGSKGKDSFTESPSVEDLTRFHSKSPI----SHISKVKT-PTIFLLGAQDL 716 (771)
Q Consensus 652 ~~~~~~~----~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~-P~lii~G~~D~ 716 (771)
+...... ....+ ... +...+..... . ......+|. ..+.++++ |+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 229 GGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGE-------D----REHPACNPFSPRGKSLEGVSFPKSLVVVAGLDL 297 (351)
T ss_dssp CCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTC-------C----TTSTTTCTTSTTSCCCTTCCCCEEEEEEETTST
T ss_pred CCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCC-------C----CCCcccCCCCCCccchhhCCCCCEEEEEcCCCc
Confidence 5321100 00000 000 0000000000 0 000011221 23455565 99999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC---CCChHHHHHHHHHHHHHh
Q 004141 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~fl~~~ 769 (771)
+++ ++..+++++++.+++++++++++++|.+.. .+...++++.+.+||+++
T Consensus 298 ~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred chH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 885 678899999999999999999999998765 244567888999998753
No 42
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=2.4e-21 Score=202.31 Aligned_cols=239 Identities=17% Similarity=0.156 Sum_probs=163.8
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC-
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG- 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~- 590 (771)
+...+|.++.++++.|++ .++.|+||++||+++. .. .+ .....|+++||.|+++|+||.+++..........
T Consensus 61 ~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~--~~-~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 61 YKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDG--EI-HEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp EEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGG--GH-HHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred EEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCCC--Cc-ccccchhhCCcEEEEecCCCCCCCCCcccccCCcc
Confidence 344467899999999974 5678999999998764 21 23 3344778899999999999976654332100000
Q ss_pred ----Cc---------cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccc-hhhh
Q 004141 591 ----KV---------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALM 656 (771)
Q Consensus 591 ----~~---------~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~-~~~~ 656 (771)
.. ....++|+.++++++.++..+|+++|+|+|||+||.+++.++.++|+ ++++|+.+|... ....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~ 213 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA 213 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH
Confidence 00 02347899999999999877888999999999999999999999876 677777888643 2222
Q ss_pred hcCCCCCcchhhhhccCCCCccCCCCCC--hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004141 657 VGTTDIPDWCYVESYGSKGKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
........+.....+.. .. ..+. ..........++...+.++++|+|+++|+.|..+|++++..+++.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-- 286 (318)
T 1l7a_A 214 IDVALEQPYLEINSFFR----RN-GSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-- 286 (318)
T ss_dssp HHHCCSTTTTHHHHHHH----HS-CCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS--
T ss_pred HhcCCcCccHHHHHHHh----cc-CCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC--
Confidence 11111111111000000 00 0000 111122233456667788899999999999999999999988887754
Q ss_pred CCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 735 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+++++++++++|.. ..+....+.+||+++|+
T Consensus 287 -~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 287 -KKELKVYRYFGHEY-----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp -SEEEEEETTCCSSC-----CHHHHHHHHHHHHHHHC
T ss_pred -CeeEEEccCCCCCC-----cchhHHHHHHHHHHHhC
Confidence 48999999999983 24678999999999885
No 43
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=2.6e-21 Score=208.83 Aligned_cols=311 Identities=13% Similarity=0.141 Sum_probs=203.5
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcccccc-ceEEEeCCCCCeEEEEecCCCCCC
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTG-ASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~-~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.+..||||++|+|..+. .....||++++ .+++.++++... .. ...+.|||||++|+|++...
T Consensus 40 ~~~~SpdG~~l~~~~~~------~g~~~l~~~d~--~~~~~~~l~~~~-----~~~~~~~~~spdg~~l~~~~~~~---- 102 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDF------DGNRNYYLLNL--ETQQAVQLTEGK-----GDNTFGGFISTDERAFFYVKNEL---- 102 (396)
T ss_dssp SCCBCTTSCEEEEEECT------TSSCEEEEEET--TTTEEEECCCSS-----CBCTTTCEECTTSSEEEEEETTT----
T ss_pred cCcCCCCCCEEEEEEec------CCCceEEEEEC--CCCcEEEeecCC-----CCccccceECCCCCEEEEEEcCC----
Confidence 35678999999998754 23457888775 344556665443 22 23388999999999998653
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004141 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
+++.++ .+++.++++.... . |+|||++|+|.+...... .+.....
T Consensus 103 ~l~~~d~~~~~~~~~~~~~~-------------~--~~~~g~~l~~~~~~~~~~-------------------~~~~~~~ 148 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVDE-------------E--WKGYGTWVANSDCTKLVG-------------------IEILKRD 148 (396)
T ss_dssp EEEEEETTTCCEEEEEECCT-------------T--EEEEEEEEECTTSSEEEE-------------------EEEEGGG
T ss_pred cEEEEECCCCCcEEEEeccc-------------c--cCCCCCEEEeccCCcccc-------------------ccccccc
Confidence 588777 5666666655321 1 788888888754321100 0000112
Q ss_pred ccCCcCcccC-----CccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCCCCccEEEEEeecCcceeeeeeeecc
Q 004141 204 WEEDWGETYA-----GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYN 277 (771)
Q Consensus 204 ~~~d~g~~~~-----~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~ 277 (771)
+++|...... ......|+++|+.+++.+.+ ......+..+.||| ||+. |+|++.... ..
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~ 213 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--HQDTAWLGHPIYRPFDDST----VGFCHEGPH---------DL 213 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCS---------SS
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCCcEEee--ccCCcccccceECCCCCCE----EEEEecCCC---------CC
Confidence 2333211111 12457899999999998888 44455677899999 8998 999873111 01
Q ss_pred CCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCC--ccccceeecCCCCEEEEEecCCCCCCCCccccccceeee
Q 004141 278 RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI--SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 355 (771)
Q Consensus 278 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~--~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d 355 (771)
...+||.+++ ++++.+.++... ..+..+.|||||++|+|.+.+. | .....|+++|
T Consensus 214 ~~~~l~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~----~--~~~~~l~~~d 270 (396)
T 3c5m_A 214 VDARMWLVNE-----------------DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK----G--QTDRVIYKAN 270 (396)
T ss_dssp CSCCCEEEET-----------------TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET----T--TCCEEEEEEC
T ss_pred CCceEEEEEC-----------------CCCceeEeeccCCCccccceEECCCCCEEEEEecCC----C--CccceEEEEE
Confidence 2248999998 677777777642 3477899999999999998764 2 1123499999
Q ss_pred cCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEee-------------eCCeeEEEEEECC
Q 004141 356 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSI-------------WGSSQVIISVNVS 421 (771)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-Dg~~l~~~~~-------------~~~~~~l~~~d~~ 421 (771)
+.+++.+.++. +++ .. +.|+| ||+.|++... ..+...||.+|+.
T Consensus 271 ~~~g~~~~l~~----------------~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 271 PETLENEEVMV----------------MPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp TTTCCEEEEEE----------------CCS-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CCCCCeEEeee----------------CCC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 98766433211 111 11 67999 9997766432 1244689999999
Q ss_pred CCcEEEecCCCC-----------CceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 422 SGELLRITPAES-----------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 422 tg~~~~l~~~~~-----------~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
+++.++++.... ....+.|++||+.|++..... .+.+||++++.++
T Consensus 329 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 329 AKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPES 385 (396)
T ss_dssp TTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTT
T ss_pred cCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccc
Confidence 999888875543 134468999999999887654 4567999887654
No 44
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.87 E-value=3.1e-21 Score=206.10 Aligned_cols=247 Identities=13% Similarity=0.081 Sum_probs=165.2
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH-HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
.+...+|..+.++++.|++ .+.++.|+||++||++.. ...+.. .+..|+++||.|+++|+||.+...... ...
T Consensus 72 ~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~ 145 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQP---RNV 145 (367)
T ss_dssp EEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSS---SSC
T ss_pred EEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcC---ccc
Confidence 3445568899999999985 235678999999997754 334543 678899999999999999954432211 111
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh-cCCCC-------
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GTTDI------- 662 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~-~~~~~------- 662 (771)
.......+|+.++++++.++..++.++|+|+|||+||.+++.++.++| .++++|+.+|+....... +....
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRT 224 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHH
Confidence 112345789999999999887778899999999999999999999988 589999998863211100 00000
Q ss_pred -------------------------C---c---ch---hhhhccCCCC--cc---CCCCCChhhHHHHhhcCcccccCCC
Q 004141 663 -------------------------P---D---WC---YVESYGSKGK--DS---FTESPSVEDLTRFHSKSPISHISKV 703 (771)
Q Consensus 663 -------------------------~---~---~~---~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~sp~~~~~~i 703 (771)
+ . .. ....+..... .. ............+...++...+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 304 (367)
T 2hdw_A 225 RTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEI 304 (367)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGG
T ss_pred HHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhh
Confidence 0 0 00 0000000000 00 0000001223445566777788889
Q ss_pred C-CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 704 K-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 704 ~-~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+ +|+|+++|++|. +++.++++++. .+.+++++++++++|..........+.+.+.+||+++|
T Consensus 305 ~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 305 SPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp TTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred cCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 9 999999999998 77777777665 56789999999999974321111126789999999876
No 45
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.86 E-value=1e-20 Score=184.42 Aligned_cols=194 Identities=13% Similarity=0.166 Sum_probs=145.0
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCC---CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP---HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~---~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+| +++++++.|. ..++.|+||++||++ .......+...+..|+++||.|+++|+||.+.....
T Consensus 11 ~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 80 (208)
T 3trd_A 11 IQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR------ 80 (208)
T ss_dssp EECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC------
T ss_pred EECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC------
Confidence 445567 9999999986 345789999999954 222223456678889999999999999995443221
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004141 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
........+|+.++++++.++ .+.++++++|||+||.+++.++ .+| +++++|+.+|..+..
T Consensus 81 ~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~--------------- 141 (208)
T 3trd_A 81 YDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE--------------- 141 (208)
T ss_dssp CCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG---------------
T ss_pred ccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC---------------
Confidence 122334578999999999887 3558999999999999999999 667 899999988875100
Q ss_pred hccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004141 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
....+..+++|+|+++|++|..+|++.++++++.+.. +++++++++++|.+
T Consensus 142 --------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~ 192 (208)
T 3trd_A 142 --------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS---PVEFVVMSGASHFF 192 (208)
T ss_dssp --------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS---CCEEEEETTCCSSC
T ss_pred --------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC---ceEEEEeCCCCCcc
Confidence 0122344579999999999999999998888877654 38999999999987
Q ss_pred CCCCChHHHHHHHHHHH
Q 004141 750 ERPQSDFESFLNIGLWF 766 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~fl 766 (771)
... ..++.+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 643 245556666665
No 46
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.86 E-value=7.8e-21 Score=200.83 Aligned_cols=245 Identities=16% Similarity=0.181 Sum_probs=163.9
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+...+|..+.++++.|. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||. |.+........
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGH---GQSEGERMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTTS---TTSCSSTTCCS
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCCC---cCCCCcCCCcC
Confidence 345667899999999885 3457999999997765 34788889999999999999999994 44322111111
Q ss_pred ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcc--hhhh
Q 004141 592 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW--CYVE 669 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~--~~~~ 669 (771)
.....++|+.++++++..+ .+..+|+|+|||+||.+++.++.++|++++++|+.+|........... .... ....
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~ 186 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATT-FKVLAAKVLN 186 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSH-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhH-HHHHHHHHHH
Confidence 2223378999999998877 456789999999999999999999999999999999976432110000 0000 0000
Q ss_pred hccC-CC---CccCCCCCChhhHHHHh---------------------hcCcccccCCCCCcEEEEeeCCCCccCcHHHH
Q 004141 670 SYGS-KG---KDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 724 (771)
Q Consensus 670 ~~~~-~~---~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~ 724 (771)
.+.. .. ...............+. .......+.++++|+|+++|++|..++++.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~ 266 (342)
T 3hju_A 187 LVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 266 (342)
T ss_dssp HHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHH
Confidence 0000 00 00000000001001100 00112446788999999999999999999999
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCC--hHHHHHHHHHHHHHhh
Q 004141 725 QYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 770 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~~~L 770 (771)
.+++.+.. .+++++++++++|.+..... ..+++..+++||++++
T Consensus 267 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 267 LLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 88887753 25899999999998765432 4467788999998875
No 47
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=6.6e-21 Score=205.16 Aligned_cols=280 Identities=13% Similarity=0.130 Sum_probs=171.8
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
|..||||++|+|..+. ....+||++++ .+++.++++... ......+.|||||++|+|.+... .+
T Consensus 41 ~~~SpDg~~l~~~~~~------~g~~~l~~~d~--~~g~~~~lt~~~----~~~~~~~~~spdg~~l~~~~~~~----~l 104 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF------DGPWNYYLLDL--NTQVATQLTEGR----GDNTFGGFLSPDDDALFYVKDGR----NL 104 (388)
T ss_dssp CCBCTTSCEEEEEECT------TSSCEEEEEET--TTCEEEECCCSS----CBCSSSCEECTTSSEEEEEETTT----EE
T ss_pred ccCCCCCCEEEEEEcC------CCCceEEEEeC--CCCceEEeeeCC----CCCccceEEcCCCCEEEEEeCCC----eE
Confidence 7789999999998752 13457898776 445667776553 11223578999999999987532 34
Q ss_pred EEEe-cCCcceEEEecCC-------------------------------------------------------ccccccc
Q 004141 127 FELW-SQSQLEKEFHVPQ-------------------------------------------------------TVHGSVY 150 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~-------------------------------------------------------~~~g~~~ 150 (771)
+.++ .+++.+.++..+. +....+.
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 4444 3333222221110 0000000
Q ss_pred -CCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004141 151 -ADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 151 -~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
.......+.||| ||++|+|.+..... .....||++|++++
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~--------------------------------------~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEGPHD--------------------------------------LVDARMWLINEDGT 226 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCTT--------------------------------------TSSCSEEEEETTSC
T ss_pred cCCccccccEECCCCCCEEEEEEecCCC--------------------------------------CCcceEEEEeCCCC
Confidence 112345788999 99999998753210 02468999999999
Q ss_pred ceeeccCCCCC--CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004141 229 EVQAVKGIPKS--LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 229 ~~~~l~~~~~~--~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
+.+.+ +... ..+..+.|||||+. |+|++...+. ....||++|+ ++
T Consensus 227 ~~~~l--~~~~~~~~~~~~~~spdg~~----l~~~~~~~~~----------~~~~l~~~d~-----------------~~ 273 (388)
T 3pe7_A 227 NMRKV--KTHAEGESCTHEFWVPDGSA----LVYVSYLKGS----------PDRFIYSADP-----------------ET 273 (388)
T ss_dssp CCEES--CCCCTTEEEEEEEECTTSSC----EEEEEEETTC----------CCEEEEEECT-----------------TT
T ss_pred ceEEe--eeCCCCcccccceECCCCCE----EEEEecCCCC----------CcceEEEEec-----------------CC
Confidence 98888 4433 34668899999999 9998854321 1125999998 77
Q ss_pred CcceecCCCCc------cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC
Q 004141 307 LPVVNLTESIS------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG 380 (771)
Q Consensus 307 ~~~~~lt~~~~------~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (771)
++.+.++...+ ....+.|||||++|+|...+..... ..+..+|+++|+.+++.++++......
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~--~~~~~~i~~~d~~~~~~~~l~~~~~~~--------- 342 (388)
T 3pe7_A 274 LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK--IENDPFLYVFNMKNGTQHRVARHDTSW--------- 342 (388)
T ss_dssp CCEEEEEEECCEEEEEECTTSSEEEEEECCC--------------CCCCEEEEEETTTTEEEEEEECCCCC---------
T ss_pred CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc--cCCCCEEEEEeccCCceEEeccccCcc---------
Confidence 87777654332 1334589999999999765421000 012467999999887654443221100
Q ss_pred CCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004141 381 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 381 ~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+.+-.......++|||||++|+|.+...+..+||.+++..+.
T Consensus 343 ~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 343 KVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESV 386 (388)
T ss_dssp CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGG
T ss_pred cccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhc
Confidence 00000000024578999999999999988888999999986543
No 48
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.86 E-value=2.1e-21 Score=199.12 Aligned_cols=231 Identities=14% Similarity=0.121 Sum_probs=154.2
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECC--CCCCCCChhh-----
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNY--RGSLGFGEEA----- 584 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~Vv~~d~--rG~~~~g~~~----- 584 (771)
...|.++.+.+|.|++.. .+++|+||++||+++.. ..+... .+.++++||.|+++|+ ||.+..|...
T Consensus 24 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g 100 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100 (282)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CC
T ss_pred hhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcchHHHHhhcCCeEEEEeccccCcccccccccccccc
Confidence 345788999999998542 36899999999987653 234333 5778899999999999 8766544321
Q ss_pred -----hhcCCC-Ccc--ccchhhHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh
Q 004141 585 -----LQSLPG-KVG--SQDVNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 585 -----~~~~~~-~~~--~~~~~D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 655 (771)
...... .+. .....++. .++.++.++..+|++||+|+|+||||++|+.++.++|++++++++.+|+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~ 180 (282)
T 3fcx_A 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180 (282)
T ss_dssp CCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG
T ss_pred CCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc
Confidence 000000 000 01122233 444455545557889999999999999999999999999999999999876432
Q ss_pred hhcCCCCCcch---hhhhccCCCCccCCCCCChhhHHHHhhcCccccc---CCCCCcEEEEeeCCCCccCcHH--HHHHH
Q 004141 656 MVGTTDIPDWC---YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKVKTPTIFLLGAQDLRVPVSN--GLQYA 727 (771)
Q Consensus 656 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i~~P~lii~G~~D~~vp~~~--~~~~~ 727 (771)
. .|. +...++. ....+...+|...+ ..+++|+|++||+.|.++|..+ ++.++
T Consensus 181 ~-------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 181 C-------PWGKKAFSGYLGT-------------DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp S-------HHHHHHHHHHHC----------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred C-------chhHHHHHHhcCC-------------chhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 1 010 0011111 01122233444333 3447999999999999997655 56899
Q ss_pred HHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 728 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 728 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++|++.|++++++++|+++|.+.. ....+.+.+.|+.++|+
T Consensus 241 ~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 241 AACTEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 999999999999999999998642 23567788899999885
No 49
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.86 E-value=2e-20 Score=193.30 Aligned_cols=246 Identities=15% Similarity=0.194 Sum_probs=162.2
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+...+|..++++++.|. +++.|+||++||.+.. ...|...+..|+++||.|+++|+||. |.+........
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGH---GQSEGERMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTS---TTSCSSTTCCS
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCCC---CCCCCCCCCCC
Confidence 345667899999999875 3457999999997765 34788889999999999999999994 44322111111
Q ss_pred ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc-----------CC
Q 004141 592 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TT 660 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----------~~ 660 (771)
.....++|+.++++++..+ .+.++++++|||+||.+++.++.++|++++++|+.+|......... ..
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 1223368888888888776 3457899999999999999999999999999999999764321100 00
Q ss_pred CCCcch--------------hhhhccCCCCccCCCCCChhhHHHHh-hcCcccccCCCCCcEEEEeeCCCCccCcHHHHH
Q 004141 661 DIPDWC--------------YVESYGSKGKDSFTESPSVEDLTRFH-SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 725 (771)
Q Consensus 661 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~ 725 (771)
..+... ....+...................+. .......+.++++|+|+++|++|..++++.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 249 (303)
T 3pe6_A 170 VLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 249 (303)
T ss_dssp TCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHH
T ss_pred hcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHH
Confidence 000000 00000000000000000000000000 001123467889999999999999999999888
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCCCC--hHHHHHHHHHHHHHhh
Q 004141 726 YARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 770 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~fl~~~L 770 (771)
+++.+.. ..+++++++++||.+..... ..+.+..+++||++++
T Consensus 250 ~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 250 LMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 8887752 25899999999998764432 4467788999999876
No 50
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.86 E-value=1.9e-21 Score=202.61 Aligned_cols=231 Identities=19% Similarity=0.213 Sum_probs=160.6
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+| ++.+++|.|++. .++.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 55 ~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~----------- 120 (310)
T 2hm7_A 55 LPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK----------- 120 (310)
T ss_dssp ETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------
T ss_pred cCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC-----------
Confidence 3345 899999999742 46789999999987543 334677788888875 9999999999966532
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhCCC----ceeEEEecCCccchhhhhcCCCCCcc
Q 004141 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDW 665 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~p~~~~~~~~~~~~~~~~ 665 (771)
.....+|+.++++++.++. .+++++|+|+|||+||.+++.++.++|+ .++++|+.+|..+..... ..+.+
T Consensus 121 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~---~~~~~ 197 (310)
T 2hm7_A 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH---PPASI 197 (310)
T ss_dssp TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTS---CCHHH
T ss_pred CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCccc---CCcch
Confidence 1234789999999998864 3678899999999999999999987765 699999999987643100 00000
Q ss_pred hhhhhccCC-C---------CccCCCCCChhhHHHHhhcCcccc--cCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004141 666 CYVESYGSK-G---------KDSFTESPSVEDLTRFHSKSPISH--ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 666 ~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~sp~~~--~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
...... . ...+.... .. ......+|... +..+ +|+||++|++|.++ .++..+++.+++.
T Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~ 268 (310)
T 2hm7_A 198 ---EENAEGYLLTGGMMLWFRDQYLNSL--EE-LTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKA 268 (310)
T ss_dssp ---HHTSSSSSSCHHHHHHHHHHHCSSG--GG-GGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHT
T ss_pred ---hhcCCCCCCCHHHHHHHHHHhCCCC--Cc-cCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHC
Confidence 000000 0 00000000 00 00012233321 2333 49999999999988 6788999999999
Q ss_pred CCCEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHhhC
Q 004141 734 GVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~L~ 771 (771)
|++++++++++++|++.. .+...+++..+.+||+++|+
T Consensus 269 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 269 GVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 999999999999997653 12335788999999999875
No 51
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.86 E-value=4.2e-21 Score=196.73 Aligned_cols=234 Identities=11% Similarity=0.068 Sum_probs=158.2
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCC-----------C
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------F 580 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vv~~d~rG~~~-----------~ 580 (771)
...|.++.+.+|.|+++...+++|+||++||++... ..|.. ....+++.||.|+++|.++.+. .
T Consensus 25 ~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 25 NTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp TTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred cccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 345788999999998765578899999999987653 23433 3456678899999999875321 1
Q ss_pred ChhhhhcCC-CCcc-ccc-hhhHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh
Q 004141 581 GEEALQSLP-GKVG-SQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 581 g~~~~~~~~-~~~~-~~~-~~D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~ 656 (771)
|.++..... ..+. ... ...+. +.+.++.+...+ ++|++|+|||+||++++.++.++|++++++++.+|+.+....
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 181 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNC 181 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGS
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccC
Confidence 111110000 0000 001 12222 344455454434 589999999999999999999999999999999998764321
Q ss_pred hcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEeeCCCCccCcHH-HHHHHHHHHhC
Q 004141 657 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQYARALREK 733 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~lii~G~~D~~vp~~~-~~~~~~~l~~~ 733 (771)
... ...+...++. ....+...+|...+.+++ +|+|++||+.|.+++.+. ++++++.|++.
T Consensus 182 ~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3i6y_A 182 PWG----QKAFTAYLGK-------------DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSN 244 (280)
T ss_dssp HHH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHT
T ss_pred chH----HHHHHHhcCC-------------chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHc
Confidence 100 0000011111 112334556665555554 899999999999998755 88999999999
Q ss_pred CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 734 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
|++++++++|+++|.+. .....+.++++|+.++|+
T Consensus 245 g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 245 NYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp TCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 99999999999999763 233567889999999885
No 52
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.86 E-value=7.1e-21 Score=199.38 Aligned_cols=237 Identities=20% Similarity=0.207 Sum_probs=160.3
Q ss_pred cccCCCc-eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCC
Q 004141 513 LTKGAQK-PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~-~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+|. ++.+++|.|++ ..++.|+||++|||++... ...+...+..|++ .||.|+++||||.+++.
T Consensus 56 i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~-------- 125 (323)
T 1lzl_A 56 APGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT-------- 125 (323)
T ss_dssp ECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC--------
T ss_pred ecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC--------
Confidence 3344565 79999999974 3457899999999885432 3356677778876 59999999999965431
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhCCC----ceeEEEecCCccchhhh----hc
Q 004141 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALM----VG 658 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~p~~~~~~~----~~ 658 (771)
.....+|+.++++++.+. ..+|+++|+|+|||+||.+++.++.++++ .++++++.+|+.+.... ..
T Consensus 126 ---~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 202 (323)
T 1lzl_A 126 ---FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTN 202 (323)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHHH
T ss_pred ---CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHHH
Confidence 123478999999998874 23677899999999999999999987665 48999999998764321 00
Q ss_pred CCCCCcch------hhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEeeCCCCccCcHHHHHHHHHH
Q 004141 659 TTDIPDWC------YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 659 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~lii~G~~D~~vp~~~~~~~~~~l 730 (771)
......+. +...+....... ..........+|... ..+. +|+||++|++|.++ .++..++++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l 273 (323)
T 1lzl_A 203 FVDTPLWHRPNAILSWKYYLGESYSG------PEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIEYALRL 273 (323)
T ss_dssp CSSCSSCCHHHHHHHHHHHHCTTCCC------TTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCccc------ccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHHHHHHH
Confidence 00000000 000000000000 000000111233322 1222 79999999999988 6888999999
Q ss_pred HhCCCCEEEEEeCCCCccCCCCC---ChHHHHHHHHHHHHHhhC
Q 004141 731 REKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~fl~~~L~ 771 (771)
++.|++++++++++++|++.... ...++++.+.+||+++++
T Consensus 274 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 274 LQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp HHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999865322 245788999999998874
No 53
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.85 E-value=3e-21 Score=218.66 Aligned_cols=254 Identities=14% Similarity=0.162 Sum_probs=171.8
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC----C-CCcchH-HH---HHHHHCCcEEEEECCCCCCCCCh
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV----S-LSSYSK-SL---AFLSSVGYSLLIVNYRGSLGFGE 582 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~----~-~~~~~~-~~---~~la~~G~~Vv~~d~rG~~~~g~ 582 (771)
.+...||.+|+++++.|++ .++.|+||++||.+... . ...|.. .. +.|+++||+|+.+|+||+++++.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 3456688999999999974 36789999999844321 1 112221 22 78999999999999999887766
Q ss_pred hhhhcCC-----CCccccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh-
Q 004141 583 EALQSLP-----GKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL- 655 (771)
Q Consensus 583 ~~~~~~~-----~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~- 655 (771)
.+....+ ..++..+.+|+.++++||.++ +..+ .||+|+|+||||++++.++..+|+.++++|+.+|+.++..
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~~~~ 184 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMG 184 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCTTTT
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccccccc
Confidence 5432211 111226789999999999998 6665 5999999999999999999888999999999999988422
Q ss_pred -hh---cCCCCC--cchhhhhccCCC--------C---c-------------cC-C-CCCChh-------hHHHHhhcCc
Q 004141 656 -MV---GTTDIP--DWCYVESYGSKG--------K---D-------------SF-T-ESPSVE-------DLTRFHSKSP 696 (771)
Q Consensus 656 -~~---~~~~~~--~~~~~~~~~~~~--------~---~-------------~~-~-~~~~~~-------~~~~~~~~sp 696 (771)
.. +..... .|.+........ . . .+ . ..+.++ ..+.|...||
T Consensus 185 ~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp 264 (615)
T 1mpx_A 185 DDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQAL 264 (615)
T ss_dssp SSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCH
T ss_pred cccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcCh
Confidence 11 000000 010000000000 0 0 00 0 000000 1134557789
Q ss_pred ccccCC--CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC---EEEEEeCCCCccCCC------------CCChHH-H
Q 004141 697 ISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE---TKVIVFPNDVHGIER------------PQSDFE-S 758 (771)
Q Consensus 697 ~~~~~~--i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~---~~~~~~~~~~H~~~~------------~~~~~~-~ 758 (771)
..++++ |++|+|++||..|.+ ++.++.+++++|+..|++ +++++.|. +|+... .+.... .
T Consensus 265 ~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 342 (615)
T 1mpx_A 265 DKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTARQFR 342 (615)
T ss_dssp HHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCcccchhhh
Confidence 889999 999999999999998 888999999999998753 88888887 697511 111112 2
Q ss_pred HHHHHHHHHHhhC
Q 004141 759 FLNIGLWFKKYCK 771 (771)
Q Consensus 759 ~~~i~~fl~~~L~ 771 (771)
.+.+++||++|||
T Consensus 343 ~~~~~~wfd~~Lk 355 (615)
T 1mpx_A 343 HDVLRPFFDQYLV 355 (615)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhc
Confidence 5778999999996
No 54
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.85 E-value=3.5e-20 Score=188.58 Aligned_cols=233 Identities=12% Similarity=0.173 Sum_probs=155.9
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~-~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
+...+|.++.+.++.|. ..++.|+||++||+++... ...+. .....|++. |.|+++|+||++...
T Consensus 8 ~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~--------- 74 (275)
T 3h04_A 8 VITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS--------- 74 (275)
T ss_dssp EECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC---------
T ss_pred EecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc---------
Confidence 44567889999999987 4457899999999874322 22343 566677666 999999999854321
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcc-----
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW----- 665 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~----- 665 (771)
.....+|+.++++++.++ ++.++++|+||||||.+++.++.+ +.++++|+.+|..+.............
T Consensus 75 --~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T 3h04_A 75 --LDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQ 148 (275)
T ss_dssp --HHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHT
T ss_pred --cchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccc
Confidence 123478999999999887 567899999999999999999998 789999999998765211100000000
Q ss_pred ----hhhhhccCCCCccCCCCCChhhHHHH------------hh--------cC-cccccCCCCCcEEEEeeCCCCccCc
Q 004141 666 ----CYVESYGSKGKDSFTESPSVEDLTRF------------HS--------KS-PISHISKVKTPTIFLLGAQDLRVPV 720 (771)
Q Consensus 666 ----~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--------~s-p~~~~~~i~~P~lii~G~~D~~vp~ 720 (771)
.....+.. ...............+ .. .. ....+.+++ |+|+++|++|..+|+
T Consensus 149 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~ 225 (275)
T 3h04_A 149 SINETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPV 225 (275)
T ss_dssp TSCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCT
T ss_pred cchHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCCh
Confidence 00000000 0000000000000000 00 00 111235666 999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCCh--HHHHHHHHHHHHHhhC
Q 004141 721 SNGLQYARALREKGVETKVIVFPNDVHGIERPQSD--FESFLNIGLWFKKYCK 771 (771)
Q Consensus 721 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~fl~~~L~ 771 (771)
+.++.+++.+. +.+++++++++|.+...... .+++..+.+||+++|.
T Consensus 226 ~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 226 EESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp HHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99888876554 47899999999998766654 6899999999999873
No 55
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.85 E-value=2.4e-20 Score=183.54 Aligned_cols=199 Identities=11% Similarity=0.085 Sum_probs=150.2
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~---~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
...+| ++.++++.|.+. ..++.|+||++||++... ....+...+..|+++||.|+++|+||.+..... .
T Consensus 16 ~~~~g-~~~~~~~~p~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------~ 87 (220)
T 2fuk_A 16 DGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS------F 87 (220)
T ss_dssp EETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC------C
T ss_pred eCCCC-eEEEEEEeCCCC-CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------c
Confidence 34456 899999999731 014589999999965322 222356678889999999999999995443221 1
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.......+|+.++++++.++. +.++++++|||+||.+++.++.++ .++++|+.+|......
T Consensus 88 ~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------- 148 (220)
T 2fuk_A 88 DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------- 148 (220)
T ss_dssp CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------
T ss_pred ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------
Confidence 223345889999999998874 667999999999999999999887 7999999988754211
Q ss_pred ccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004141 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
...+. ...|+|+++|++|..+|++.++++++.+. .+++++++++++|.+.
T Consensus 149 --------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~ 198 (220)
T 2fuk_A 149 --------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFH 198 (220)
T ss_dssp --------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCT
T ss_pred --------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceeh
Confidence 00011 14789999999999999999888887764 3588999999999877
Q ss_pred CCCChHHHHHHHHHHHHHhhC
Q 004141 751 RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 751 ~~~~~~~~~~~i~~fl~~~L~ 771 (771)
. ...++.+.+.+||+++|+
T Consensus 199 ~--~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 199 R--KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp T--CHHHHHHHHHHHHGGGCS
T ss_pred h--hHHHHHHHHHHHHHHHhh
Confidence 5 345788999999998874
No 56
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.85 E-value=2.8e-21 Score=201.56 Aligned_cols=233 Identities=21% Similarity=0.210 Sum_probs=158.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+| ++.+++|.|.+ .++.|+||++|||++.. ....+...+..|++ .||.|+++||||.+++.
T Consensus 58 ~~~g-~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~----------- 122 (313)
T 2wir_A 58 GRGG-PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK----------- 122 (313)
T ss_dssp ETTE-EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC-----------
T ss_pred CCCC-cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC-----------
Confidence 3445 89999999973 45679999999987433 23467778888887 49999999999965531
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhh-----cCC
Q 004141 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMV-----GTT 660 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~-----~~~ 660 (771)
.....+|+.++++++.+.. .+++++|+|+|+|+||.+++.++.+++++ ++++|+.+|+.+..... ...
T Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 202 (313)
T 2wir_A 123 FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTGSPTVSRVEYS 202 (313)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCSSCCCHHHHHTC
T ss_pred CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCCCCCCcCHHHhc
Confidence 1234788999999988752 36777999999999999999999887776 99999999987621100 000
Q ss_pred --CCC--cchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004141 661 --DIP--DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 661 --~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
... .......+. ..+...+ . .......+|+...-+..+|+||++|+.|.++ .++..++++++..|++
T Consensus 203 ~~~~~~~~~~~~~~~~----~~~~~~~--~-~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~ 273 (313)
T 2wir_A 203 GPEYVILTADLMAWFG----RQYFSKP--Q-DALSPYASPIFADLSNLPPALVITAEYDPLR--DEGELYAHLLKTRGVR 273 (313)
T ss_dssp SGGGCSSCHHHHHHHH----HHHCSSG--G-GGGSTTTCGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCC
T ss_pred ccCCCccCHHHHHHHH----HHhCCCC--C-ccCCCccCcCcccccCCCcceEEEcCcCcCh--HHHHHHHHHHHHCCCC
Confidence 000 000000000 0000000 0 0001122444211122269999999999988 5788999999999999
Q ss_pred EEEEEeCCCCccCCCC----CChHHHHHHHHHHHHHhhC
Q 004141 737 TKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~L~ 771 (771)
++++++++++|++... +...+++..+.+||+++++
T Consensus 274 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 274 AVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999987532 2345788899999998764
No 57
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.85 E-value=2.5e-21 Score=197.62 Aligned_cols=210 Identities=10% Similarity=0.095 Sum_probs=147.7
Q ss_pred CCCCCcEEEEEcCCCCCC---CCCcchHHHHHH----HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHH
Q 004141 533 DCSCDPLIVVLHGGPHSV---SLSSYSKSLAFL----SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID 605 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~---~~~~~~~~~~~l----a~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~ 605 (771)
+.++.|+||++|||++.. ....|...+..| ++.||.|+++|||++++. .....++|+.++++
T Consensus 37 ~~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 37 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 356789999999987553 234577777878 589999999999985432 11235789999999
Q ss_pred HHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-----------------CCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004141 606 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----------------PDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 606 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----------------p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
++.++ ++.++++|+||||||.+++.++.++ |+.++++|+.+|..+................
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 5678999999999999999999885 7889999999998776543221100000000
Q ss_pred hhccCCCCccCCCCCChhhHHHHhhcCccc--ccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 004141 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPIS--HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 746 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~--~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~ 746 (771)
..++. ....+. .... ..++.. ....+++|+|+++|++|..+|+++++.+++.++..+.+++++++++++
T Consensus 184 ~~~~~-~~~~~~--~~~~------~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~g 254 (273)
T 1vkh_A 184 LAFPD-GIQMYE--EEPS------RVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGL 254 (273)
T ss_dssp HHCTT-CGGGCC--CCHH------HHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCS
T ss_pred HHhcc-cccchh--hccc------ccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCc
Confidence 11100 000000 0000 111110 122367999999999999999999999999999999999999999999
Q ss_pred ccCCCCCChHHHHHHHHHHH
Q 004141 747 HGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~fl 766 (771)
|.+.... .++.+.+.+||
T Consensus 255 H~~~~~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 255 HNDVYKN--GKVAKYIFDNI 272 (273)
T ss_dssp GGGGGGC--HHHHHHHHHTC
T ss_pred ccccccC--hHHHHHHHHHc
Confidence 9875444 57777777775
No 58
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=5.3e-20 Score=215.40 Aligned_cols=314 Identities=11% Similarity=0.039 Sum_probs=194.7
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCC-
Q 004141 44 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE- 122 (771)
Q Consensus 44 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~- 122 (771)
...+..|+||+.+ |+ + . .+.++++++.+. +..++.... ......+..++|||||++|||.......
T Consensus 19 ~~~~~~spdg~~~-~~-~-~-------dg~i~~~d~~~g--~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR-E-Q-------KGTVRLWNVETN--TSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBSSSSCBC-CC-C-S-------SSCEEEBCGGGC--CCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred ccccEEcCCCcEE-EE-e-C-------CCCEEEEECCCC--cEEEEeccc-cccccccceEEECCCCCEEEEEecCccce
Confidence 3455678899854 33 1 1 236788776443 333333221 0000136789999999999999765422
Q ss_pred ----CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCC
Q 004141 123 ----SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 197 (771)
Q Consensus 123 ----~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (771)
...+++.+ .+++.+++...... . .....++|||||++|||++.
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~-~------~~~~~~~~SPdG~~la~~~~------------------------- 133 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPEVS-N------AKLQYAGWGPKGQQLIFIFE------------------------- 133 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCC-S------CCCSBCCBCSSTTCEEEEET-------------------------
T ss_pred eecceeeEEEEECCCCceEeccCCccc-c------ccccccEECCCCCEEEEEEC-------------------------
Confidence 24566555 55554444332111 0 11258999999999999742
Q ss_pred CCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-CC------------------ccceEEEecCCCCCccEE
Q 004141 198 WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SL------------------SVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 198 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-~~------------------~~~~~~wspDg~~~~~~l 258 (771)
..|+++|+++++.++++ .. .. ....++|||||+. |
T Consensus 134 --------------------~~i~~~~~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~----l 187 (723)
T 1xfd_A 134 --------------------NNIYYCAHVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR----L 187 (723)
T ss_dssp --------------------TEEEEESSSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE----E
T ss_pred --------------------CeEEEEECCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECCCCCE----E
Confidence 47999999999888873 22 11 1257999999999 9
Q ss_pred EEEeecCcceee---------------eeeee----ccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCC---
Q 004141 259 VFVGWSSETRKL---------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--- 315 (771)
Q Consensus 259 ~~~~~~~~~~~~---------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--- 315 (771)
+|.+......+. ...+. .+....|+++|+ .+++. +.|+..
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~-----------------~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL-----------------NGPTHDLEMMPPDDP 250 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES-----------------SSSCCCEECCCCCCG
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC-----------------CCCceeEEeeCCccC
Confidence 998754321100 00000 012237999998 66663 666653
Q ss_pred ---CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCC
Q 004141 316 ---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 392 (771)
Q Consensus 316 ---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 392 (771)
...+..+.|||||+.|++...+. .....|+++|+.+++...+..... ..... ....
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~-------~~~~~i~~~d~~~g~~~~~~~~~~----------~~~~~----~~~~ 309 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRA-------QNVSILTLCDATTGVCTKKHEDES----------EAWLH----RQNE 309 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETT-------SCEEEEEEEETTTCCEEEEEEEEC----------SSCCC----CCCC
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCC-------CCeEEEEEEeCCCCcceEEEEecc----------CCEEe----ccCC
Confidence 44578899999999887776653 234679999998876533321110 00000 0013
Q ss_pred CCccccCCCEEEEE-eeeCC----eeEEEEEE-CCCCc---EEEecCCCCCce-eeEEeecCCEEEEEEeCCC-CCCeEE
Q 004141 393 SNPWLSDGCTMLLS-SIWGS----SQVIISVN-VSSGE---LLRITPAESNFS-WSLLTLDGDNIIAVSSSPV-DVPQVK 461 (771)
Q Consensus 393 ~~~~s~Dg~~l~~~-~~~~~----~~~l~~~d-~~tg~---~~~l~~~~~~~~-~~~~s~dg~~l~~~~~~~~-~p~~l~ 461 (771)
.+.|||||+.|++. +..++ ..+||.+| ..+++ .+.++....... ...|++||+.|++...... .-..||
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 67899999999887 44555 66899999 67777 777775443332 3579999999998875531 334566
Q ss_pred EEEec
Q 004141 462 YGYFV 466 (771)
Q Consensus 462 ~~~~~ 466 (771)
..++.
T Consensus 390 ~~~~~ 394 (723)
T 1xfd_A 390 SANTV 394 (723)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 66543
No 59
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.85 E-value=4.1e-21 Score=200.23 Aligned_cols=228 Identities=18% Similarity=0.225 Sum_probs=161.3
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
++...+|.++.+++|.|.+ ++.|+||++|||++... ...+...+..|+ +.||.|+++|||+++++.
T Consensus 64 ~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------- 131 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP-------- 131 (317)
T ss_dssp EEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC--------
T ss_pred EecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC--------
Confidence 3445567799999999973 67899999999876433 335667777776 569999999999876542
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhCCC----ceeEEEecCCccchhhhh---cC
Q 004141 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMV---GT 659 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~p~~~~~~~~---~~ 659 (771)
....++|+.++++|+.++ ..+|++||+|+|+|+||++++.++.++++ .++++++.+|+.+..... ..
T Consensus 132 ---~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 208 (317)
T 3qh4_A 132 ---YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEF 208 (317)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHHT
T ss_pred ---CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHHh
Confidence 233578999999999885 34788999999999999999999987554 489999999988753100 00
Q ss_pred CCCCcchhhhhccCCCCccCCCCCChhhHHHHh-------hcCcccccCCCC--CcEEEEeeCCCCccCcHHHHHHHHHH
Q 004141 660 TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH-------SKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~sp~~~~~~i~--~P~lii~G~~D~~vp~~~~~~~~~~l 730 (771)
...+.+... . .......+. ..+|... ..++ +|+||++|+.|.+++ ++..++++|
T Consensus 209 ~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l 271 (317)
T 3qh4_A 209 RATPAFDGE-A-------------ASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFRD--EVLDYAQRL 271 (317)
T ss_dssp TTCSSSCHH-H-------------HHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTHH--HHHHHHHHH
T ss_pred cCCCCcCHH-H-------------HHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCch--hHHHHHHHH
Confidence 000000000 0 000000111 1122211 1222 599999999999984 788999999
Q ss_pred HhCCCCEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHhhC
Q 004141 731 REKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~L~ 771 (771)
++.|++++++++++++|++.. .+...++++.+.+||+++|+
T Consensus 272 ~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 272 LGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998542 23446788999999999874
No 60
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.85 E-value=1.5e-20 Score=196.32 Aligned_cols=227 Identities=19% Similarity=0.203 Sum_probs=156.9
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004141 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
++.+++|.|.+ .++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+++. .....
T Consensus 76 ~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~-----------~p~~~ 141 (323)
T 3ain_A 76 NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK-----------FPAAV 141 (323)
T ss_dssp EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC-----------CcchH
Confidence 89999999973 45689999999987533 34467778888876 49999999999965531 12347
Q ss_pred hhHHHHHHHHHHcCC-C-CCCeEEEEEcChhHHHHHHHHhhCCCce---eEEEecCCccchhhhh----cCCCCCcc--h
Q 004141 598 NDVLTAIDHVIDMGL-A-NPSKVTVVGGSHGGFLTTHLIGQAPDKF---VAAAARNPLCNLALMV----GTTDIPDW--C 666 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~-~-d~~ri~l~G~S~GG~~a~~~a~~~p~~~---~~~v~~~p~~~~~~~~----~~~~~~~~--~ 666 (771)
+|+.++++++.++.. . ++++|+|+|+|+||.+++.++.++|++. +++|+.+|+.+..... .......+ .
T Consensus 142 ~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~l~~~ 221 (323)
T 3ain_A 142 VDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTRE 221 (323)
T ss_dssp HHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHHHHSSSSSSCHH
T ss_pred HHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHHHhccCCCCCHH
Confidence 899999999987631 1 7889999999999999999998877665 8999999987632110 00000000 0
Q ss_pred hhhhccCCCCccCCCCCChhhHHHHhhcCcccc-cCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004141 667 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
....+. ..+.... .. ......+|... +..+ +|+||++|+.|.++ .++..++++++..|+++++++++++
T Consensus 222 ~~~~~~----~~~~~~~--~~-~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g~ 291 (323)
T 3ain_A 222 HIDWFG----QQYLRSF--AD-LLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLLQSGVQVTSVGFNNV 291 (323)
T ss_dssp HHHHHH----HHHCSSG--GG-GGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred HHHHHH----HHhCCCC--cc-cCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHHHcCCCEEEEEECCC
Confidence 000000 0000000 00 00012234332 2223 59999999999998 5788999999999999999999999
Q ss_pred CccCCCC----CChHHHHHHHHHHHHHhh
Q 004141 746 VHGIERP----QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~----~~~~~~~~~i~~fl~~~L 770 (771)
+|++... +...+++..+.+||+++|
T Consensus 292 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 292 IHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 9987642 334578899999999876
No 61
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.85 E-value=1.9e-20 Score=189.77 Aligned_cols=188 Identities=15% Similarity=0.147 Sum_probs=149.0
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHH
Q 004141 522 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 601 (771)
Q Consensus 522 ~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~ 601 (771)
.+.++.|... +.++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+... .....|+.
T Consensus 40 ~~~l~~p~~~-~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~------------~~~~~d~~ 104 (262)
T 1jfr_A 40 GGTIYYPTST-ADGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTLDQP------------DSRGRQLL 104 (262)
T ss_dssp CEEEEEESCC-TTCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTTCCH------------HHHHHHHH
T ss_pred ceeEEecCCC-CCCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCCCCC------------chhHHHHH
Confidence 3567777642 34678999999997655 335677888999999999999999854321 12356888
Q ss_pred HHHHHHHH----cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCc
Q 004141 602 TAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 677 (771)
Q Consensus 602 ~~i~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (771)
++++++.+ ...++.++++|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 88999887 333677899999999999999999999987 899998877421
Q ss_pred cCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004141 678 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 678 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
...+.++++|+|+++|++|..++++. ++.+++.+.. +.+++++++++++|.+..... .
T Consensus 159 -------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~H~~~~~~~-~ 217 (262)
T 1jfr_A 159 -------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG-SLDKAYLELRGASHFTPNTSD-T 217 (262)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TSCEEEEEETTCCTTGGGSCC-H
T ss_pred -------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhc-CCCceEEEeCCCCcCCcccch-H
Confidence 12345678999999999999999998 9999998843 567899999999998765443 5
Q ss_pred HHHHHHHHHHHHhhC
Q 004141 757 ESFLNIGLWFKKYCK 771 (771)
Q Consensus 757 ~~~~~i~~fl~~~L~ 771 (771)
++.+.+.+||+++++
T Consensus 218 ~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 218 TIAKYSISWLKRFID 232 (262)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 889999999999874
No 62
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.85 E-value=2.4e-21 Score=200.98 Aligned_cols=199 Identities=18% Similarity=0.186 Sum_probs=148.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
+...+|.|++ ..++.|+||++|||++.... ..+...+..|+++||.|+++|||++++.. .....+|
T Consensus 68 ~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~-----------~~~~~~d 134 (303)
T 4e15_A 68 QLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT-----------LEQLMTQ 134 (303)
T ss_dssp CEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-----------HHHHHHH
T ss_pred cEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-----------hhHHHHH
Confidence 4556778863 45678999999998754332 34556788899999999999999965432 1234789
Q ss_pred HHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHhhCC-------CceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004141 600 VLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP-------DKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 600 ~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p-------~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
+.++++++.+. ...+.++|+|+|||+||++++.++.+.+ +.++++|+.+|+.++..+...... .....+
T Consensus 135 ~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~---~~~~~~ 211 (303)
T 4e15_A 135 FTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESV---NPKNIL 211 (303)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTT---SGGGTT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccccc---chhhhh
Confidence 99999999873 1246789999999999999999988653 279999999999887654321100 000001
Q ss_pred cCCCCccCCCCCChhhHHHHhhcCcc-cccCCC----CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 004141 672 GSKGKDSFTESPSVEDLTRFHSKSPI-SHISKV----KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 746 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~ 746 (771)
.. ....+...+|. ..+..+ ++|+|++||++|..+++++++.+++++++.|.+++++++++++
T Consensus 212 ---------~~----~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~ 278 (303)
T 4e15_A 212 ---------GL----NERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYD 278 (303)
T ss_dssp ---------CC----CTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred ---------cC----CHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCC
Confidence 11 11234455676 556655 8999999999999999999999999999999999999999999
Q ss_pred cc
Q 004141 747 HG 748 (771)
Q Consensus 747 H~ 748 (771)
|.
T Consensus 279 H~ 280 (303)
T 4e15_A 279 HF 280 (303)
T ss_dssp TT
T ss_pred ch
Confidence 95
No 63
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.85 E-value=1.1e-20 Score=196.07 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=150.0
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHH
Q 004141 523 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 602 (771)
Q Consensus 523 ~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~ 602 (771)
+.+|.|.. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||.+.... ...+|+.+
T Consensus 85 ~~~~~p~~---~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~------------~~~~d~~~ 147 (306)
T 3vis_A 85 GTIYYPRE---NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTTLDQPD------------SRARQLNA 147 (306)
T ss_dssp EEEEEESS---CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSSTTCCHH------------HHHHHHHH
T ss_pred eEEEeeCC---CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCCCCCcc------------hHHHHHHH
Confidence 46777863 3378999999997654 3367778889999999999999999443211 23478889
Q ss_pred HHHHHHHc------CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004141 603 AIDHVIDM------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 603 ~i~~l~~~------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
+++++.+. ..++.++|+|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------
T ss_pred HHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------
Confidence 99999887 56788999999999999999999999887 888888877532
Q ss_pred ccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcH-HHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCCh
Q 004141 677 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSD 755 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 755 (771)
...+.++++|+|+++|++|..+|++ +.+.+++.+...+ +++++++++++|.+.....
T Consensus 203 --------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~~~- 260 (306)
T 3vis_A 203 --------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNITN- 260 (306)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGSCC-
T ss_pred --------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhhch-
Confidence 1224567799999999999999998 6999999888766 8999999999998765544
Q ss_pred HHHHHHHHHHHHHhhC
Q 004141 756 FESFLNIGLWFKKYCK 771 (771)
Q Consensus 756 ~~~~~~i~~fl~~~L~ 771 (771)
.++...+.+||+++|+
T Consensus 261 ~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 261 KTIGMYSVAWLKRFVD 276 (306)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHcc
Confidence 5888999999999874
No 64
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.85 E-value=4.6e-21 Score=202.23 Aligned_cols=235 Identities=17% Similarity=0.177 Sum_probs=154.7
Q ss_pred CceEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCCCc---chHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 518 QKPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSLSS---YSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 518 g~~l~~~~~~P~~~-~~~~~~p~vv~~HGg~~~~~~~~---~~~~~~~la-~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+..+.+.+|.|++. ...++.|+||++|||++...... |...+..|+ +.||.|+++||||.+++.
T Consensus 63 ~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~----------- 131 (338)
T 2o7r_A 63 LHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR----------- 131 (338)
T ss_dssp TTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------
T ss_pred CCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------
Confidence 34467778888753 23578899999999886543322 666778887 789999999999965431
Q ss_pred cccchhhHHHHHHHHHHcC------CCCCCeEEEEEcChhHHHHHHHHhhCCC--------ceeEEEecCCccchhhhhc
Q 004141 593 GSQDVNDVLTAIDHVIDMG------LANPSKVTVVGGSHGGFLTTHLIGQAPD--------KFVAAAARNPLCNLALMVG 658 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~------~~d~~ri~l~G~S~GG~~a~~~a~~~p~--------~~~~~v~~~p~~~~~~~~~ 658 (771)
....++|+.++++++.++. .+|.++++|+|||+||.+++.++.++|+ +++++|+.+|+.+......
T Consensus 132 ~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~ 211 (338)
T 2o7r_A 132 LPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTG 211 (338)
T ss_dssp TTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCH
T ss_pred CchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCCh
Confidence 1235789999999998762 1566899999999999999999998887 8999999999865321100
Q ss_pred ----CCCCCc--ch----hhhhccCCCCccCCCCCChhhHHHHhhcCc---ccccCCCCCcEEEEeeCCCCccCcHHHHH
Q 004141 659 ----TTDIPD--WC----YVESYGSKGKDSFTESPSVEDLTRFHSKSP---ISHISKVKTPTIFLLGAQDLRVPVSNGLQ 725 (771)
Q Consensus 659 ----~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---~~~~~~i~~P~lii~G~~D~~vp~~~~~~ 725 (771)
....+. .. +...+....... ..+. ...+...++ +..+..+.+|+|+++|++|.+++ .+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~~ 284 (338)
T 2o7r_A 212 SELRLANDSRLPTFVLDLIWELSLPMGADR--DHEY---CNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQME 284 (338)
T ss_dssp HHHHTTTCSSSCHHHHHHHHHHHSCTTCCT--TSTT---TCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHHH
T ss_pred hhhccCCCcccCHHHHHHHHHHhCCCCCCC--CCcc---cCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHHH
Confidence 000000 00 000000000000 0000 000000011 11223355699999999999986 5678
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCC--CChHHHHHHHHHHHHHhh
Q 004141 726 YARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~L 770 (771)
++++|++.+.+++++++++++|.+... +...++++.+.+||++++
T Consensus 285 ~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 285 LAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999987543 233578899999998775
No 65
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.85 E-value=2.5e-20 Score=194.93 Aligned_cols=222 Identities=18% Similarity=0.216 Sum_probs=153.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+|.++ +.|++ .....++||++|||++.... ..+...+..|++ .||.|+++|||+++++. ..
T Consensus 66 ~g~~~----~~p~~--~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~ 128 (322)
T 3k6k_A 66 GGVPC----IRQAT--DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FP 128 (322)
T ss_dssp TTEEE----EEEEC--TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TT
T ss_pred CCEeE----EecCC--CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------Cc
Confidence 45555 45653 22333449999998854433 345566777765 49999999999865431 22
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
..++|+.++++++.++ .+++++|+|+|+|+||.+++.++.++++. ++++|+.+|+.+..... ..+...
T Consensus 129 ~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-------~~~~~~ 200 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR-------WSNSNL 200 (322)
T ss_dssp HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS-------HHHHHT
T ss_pred hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc-------cchhhc
Confidence 3579999999999988 46889999999999999999999887654 89999999988753210 000000
Q ss_pred ccCCCCccCCCCCChhhH----HH--------HhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 671 YGSKGKDSFTESPSVEDL----TR--------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~----~~--------~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
... ... ...... .. ....+|+.......+|+||++|++|.++ .++..++++|+..|++++
T Consensus 201 ~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~ 272 (322)
T 3k6k_A 201 ADR---DFL---AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVE 272 (322)
T ss_dssp GGG---CSS---SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEE
T ss_pred cCC---CCc---CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEE
Confidence 000 000 000000 00 0123444433334479999999999985 688999999999999999
Q ss_pred EEEeCCCCccCCCC----CChHHHHHHHHHHHHHhhC
Q 004141 739 VIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 739 ~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~~L~ 771 (771)
+++|++++|.+... +...++++.+.+||+++|+
T Consensus 273 l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 273 LKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 99999999987532 2345788999999998874
No 66
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.85 E-value=3.7e-20 Score=188.05 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=152.7
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.++.+..+.+. ....|+||++||++.......+......|+++||.|+++|+||.+..... ..
T Consensus 18 ~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--------~~ 85 (270)
T 3llc_A 18 QGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA--------FR 85 (270)
T ss_dssp SGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC--------GG
T ss_pred eccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc--------cc
Confidence 3456888887766653 22479999999977653322234467778889999999999995443221 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhh---CC---CceeEEEecCCccchhhhhcCCCCCcch-
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP---DKFVAAAARNPLCNLALMVGTTDIPDWC- 666 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~---~p---~~~~~~v~~~p~~~~~~~~~~~~~~~~~- 666 (771)
....+++.+.+..+++. +..++++|+|||+||.+++.++.+ +| ++++++|+.+|..+..............
T Consensus 86 ~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 86 DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 22344444444333333 135789999999999999999999 99 8999999999987654322111111000
Q ss_pred --hhhhccCCCCccCCCCCC---hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 667 --YVESYGSKGKDSFTESPS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 667 --~~~~~~~~~~~~~~~~~~---~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
+...........+...+. ...............+.++++|+|+++|++|..+|++.++.+++.+.. .++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~ 241 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTL 241 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEE
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEE
Confidence 000000000001111111 122233334444566788899999999999999999998888877644 3489999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 742 FPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+++++|.+...+....+.+.+.+||++
T Consensus 242 ~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 242 VRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred eCCCcccccccccHHHHHHHHHHHhcC
Confidence 999999876555566677778888764
No 67
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.84 E-value=1.3e-20 Score=196.42 Aligned_cols=232 Identities=17% Similarity=0.223 Sum_probs=156.9
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+| .+.+++|.|.+ ..+.|+||++||+++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 55 ~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~----------- 119 (311)
T 2c7b_A 55 VSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK----------- 119 (311)
T ss_dssp ETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC-----------
T ss_pred CCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC-----------
Confidence 3445 89999999973 34579999999987432 234677778888875 9999999999965531
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhCCC----ceeEEEecCCccchhh--------hh
Q 004141 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLAL--------MV 657 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~~~v~~~p~~~~~~--------~~ 657 (771)
.....+|+.++++++.+.. .+++++|+|+|||+||.+++.++.++|+ .++++|+.+|+.++.. +.
T Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 199 (311)
T 2c7b_A 120 FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFG 199 (311)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHH
Confidence 1234788999999987752 3677899999999999999999987765 5899999999876210 00
Q ss_pred cCCCCC-cchhhhhccCCCCccCCCCCChhhHHHHhhcCcccc-cCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004141 658 GTTDIP-DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 658 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
...... .......+. ..+...+. . ......+|... +..+ +|+|+++|+.|.+++ +...+++.++..++
T Consensus 200 ~~~~~~~~~~~~~~~~----~~~~~~~~--~-~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~~~~~l~~~g~ 269 (311)
T 2c7b_A 200 VAETTSLPIELMVWFG----RQYLKRPE--E-AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGELYAYKMKASGS 269 (311)
T ss_dssp HCTTCSSCHHHHHHHH----HHHCSSTT--G-GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTC
T ss_pred HhccCCCCHHHHHHHH----HHhCCCCc--c-ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHHHHHHHHHCCC
Confidence 000000 000000000 00000000 0 00112233322 2333 499999999999985 56778899999999
Q ss_pred CEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHhhC
Q 004141 736 ETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~fl~~~L~ 771 (771)
+++++++++++|.+.. .+...++++.+.+||+++++
T Consensus 270 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 270 RAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998763 23345788999999998874
No 68
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.84 E-value=1.3e-20 Score=193.13 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=155.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCC-----------CC
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------FG 581 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vv~~d~rG~~~-----------~g 581 (771)
..|.++.+.+|.|+++...+++|+||++||++... ..|.. ..+.+++.||.|+++|.++.+. .|
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD--ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh--hhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 35788999999999776678899999999987653 23322 3456677899999999764221 11
Q ss_pred hhhhhcCCC-Cc-cccc-hhhHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh
Q 004141 582 EEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 582 ~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~ 657 (771)
..+...... .+ .... ...+. +.+.++.+...+ .+|++|+||||||++|+.++.++|++|+++++.+|+.+.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc
Confidence 111111000 00 0001 12222 333444444333 4899999999999999999999999999999999987643210
Q ss_pred cCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCC----CCcEEEEeeCCCCccCcHH-HHHHHHHHHh
Q 004141 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV----KTPTIFLLGAQDLRVPVSN-GLQYARALRE 732 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~P~lii~G~~D~~vp~~~-~~~~~~~l~~ 732 (771)
.. ...+...++. ....+...+|...+.++ .+|+|++||+.|.+++.+. +++++++|++
T Consensus 181 ~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3ls2_A 181 WG----VKAFTGYLGA-------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQ 243 (280)
T ss_dssp HH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHH
T ss_pred ch----hhHHHhhcCc-------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHH
Confidence 00 0000011111 11233345555555555 4599999999999998744 8899999999
Q ss_pred CCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 733 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 733 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.|+++++.++|+++|.+. .....+.++++|+.++|+
T Consensus 244 ~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 244 KDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 999999999999999864 123567889999999885
No 69
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.84 E-value=2.1e-20 Score=212.26 Aligned_cols=254 Identities=14% Similarity=0.180 Sum_probs=172.4
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-----CCC-CcchHH---H-HHHHHCCcEEEEECCCCCCCCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-----VSL-SSYSKS---L-AFLSSVGYSLLIVNYRGSLGFG 581 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-----~~~-~~~~~~---~-~~la~~G~~Vv~~d~rG~~~~g 581 (771)
.+...||.+|.++++.|++ .++.|+||++||.+.. ... ..|... . +.|+++||+|+.+|+||+++++
T Consensus 41 ~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 3445688999999999974 3678999999973322 111 111111 2 7899999999999999988887
Q ss_pred hhhhhcC--CCCcc---ccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh
Q 004141 582 EEALQSL--PGKVG---SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 582 ~~~~~~~--~~~~~---~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 655 (771)
..+.... ...++ ..+.+|+.++++||.++ +..+ .||+|+|+||||++++.++.++|+.++++|+.+|+.++..
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~~~ 196 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWM 196 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCTTT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccccc
Confidence 6553221 11122 36789999999999998 7666 5999999999999999999888999999999999887532
Q ss_pred ---h--hcCCCCC--cchhhhhcc-CCCC-------ccC---C---------------CCCChh-------hHHHHhhcC
Q 004141 656 ---M--VGTTDIP--DWCYVESYG-SKGK-------DSF---T---------------ESPSVE-------DLTRFHSKS 695 (771)
Q Consensus 656 ---~--~~~~~~~--~~~~~~~~~-~~~~-------~~~---~---------------~~~~~~-------~~~~~~~~s 695 (771)
+ .+..... .|....... .... ..+ . ..+.+. ....|...|
T Consensus 197 ~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~yw~~~S 276 (652)
T 2b9v_A 197 GDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAFWQGQA 276 (652)
T ss_dssp BSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHHHHTTC
T ss_pred ccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCChHHhcCC
Confidence 0 0110000 010000000 0000 000 0 000000 112345678
Q ss_pred cccccCC--CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC--CCEEEEEeCCCCccCCC-----C------CC--hHHH
Q 004141 696 PISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKG--VETKVIVFPNDVHGIER-----P------QS--DFES 758 (771)
Q Consensus 696 p~~~~~~--i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~-----~------~~--~~~~ 758 (771)
|..++++ |++|+|++||..|.+ +..++.+++++|+..+ +++++++.|. +|+... . .. ....
T Consensus 277 p~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 354 (652)
T 2b9v_A 277 LDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYR 354 (652)
T ss_dssp HHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccccchhhh
Confidence 8888999 999999999999997 6688999999999998 8899998887 697521 1 11 1223
Q ss_pred HHHHHHHHHHhhC
Q 004141 759 FLNIGLWFKKYCK 771 (771)
Q Consensus 759 ~~~i~~fl~~~L~ 771 (771)
.+.+++||++|||
T Consensus 355 ~~~~~~wfd~~Lk 367 (652)
T 2b9v_A 355 RDVFRPFFDEYLK 367 (652)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhC
Confidence 6788999999996
No 70
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.84 E-value=1.1e-20 Score=193.28 Aligned_cols=234 Identities=10% Similarity=0.025 Sum_probs=157.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCCCChhh-------
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEA------- 584 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vv~~d~rG~~~~g~~~------- 584 (771)
...|.++.+.+|.|++.. .+++|+||++||++... ..|.. ....+.+.||.|+++|+||.+......
T Consensus 23 ~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g 99 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTH--ANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMG 99 (278)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSB
T ss_pred cccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEecCCcccCccccccccccccc
Confidence 345788999999998543 67899999999987653 23433 344556679999999999844321110
Q ss_pred -----hhcCCC-C-ccccchhhH-H-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh
Q 004141 585 -----LQSLPG-K-VGSQDVNDV-L-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 585 -----~~~~~~-~-~~~~~~~D~-~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 655 (771)
...... . .......+. . +.++++.+...+|+++++|+|||+||++++.++.++|++++++++.+|+++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 179 (278)
T 3e4d_A 100 KGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSS 179 (278)
T ss_dssp TTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGG
T ss_pred CCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccC
Confidence 000000 0 000111222 2 355666666557779999999999999999999999999999999999876432
Q ss_pred hhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCC--CCcEEEEeeCCCCccCcHH-HHHHHHHHHh
Q 004141 656 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSN-GLQYARALRE 732 (771)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~lii~G~~D~~vp~~~-~~~~~~~l~~ 732 (771)
... ....+...++. ....+...+|...+.++ .+|+|++||+.|.+++... ++.+++.|++
T Consensus 180 ~~~----~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 180 ADW----SEPALEKYLGA-------------DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CTT----THHHHHHHHCS-------------CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred Ccc----chhhHHHhcCC-------------cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 110 00001111111 11223344555544444 4699999999999998432 6889999999
Q ss_pred CCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 733 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 733 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.|++++++++++++|.+.. ....+.++++|+.++|+
T Consensus 243 ~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 243 TDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp SSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 9999999999999997631 23567889999999885
No 71
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.84 E-value=2.1e-20 Score=202.13 Aligned_cols=238 Identities=16% Similarity=0.223 Sum_probs=159.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|..+.++++.+ +.++.|+||++||++.. ...+.... ..+.++||.|+++|+||. |.+..... .....
T Consensus 143 ~~~~l~~~~~~~----~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~D~~G~---G~s~~~~~--~~~~~ 211 (405)
T 3fnb_A 143 EGELLPGYAIIS----EDKAQDTLIVVGGGDTS--REDLFYMLGYSGWEHDYNVLMVDLPGQ---GKNPNQGL--HFEVD 211 (405)
T ss_dssp TTEEEEEEEECC----SSSCCCEEEEECCSSCC--HHHHHHHTHHHHHHTTCEEEEECCTTS---TTGGGGTC--CCCSC
T ss_pred CCeEEEEEEEcC----CCCCCCEEEEECCCCCC--HHHHHHHHHHHHHhCCcEEEEEcCCCC---cCCCCCCC--CCCcc
Confidence 467899988843 34456999999996543 22333333 356689999999999995 44422211 22233
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcC-----CCCCcchhhhh
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVES 670 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~-----~~~~~~~~~~~ 670 (771)
..+|+.++++++..+. ++|+|+|||+||++++.++.++| +++++|+.+|+.++...... ...+.+.. ..
T Consensus 212 ~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~-~~ 285 (405)
T 3fnb_A 212 ARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTIL-KW 285 (405)
T ss_dssp THHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHH-HH
Confidence 4778888888886553 78999999999999999999988 89999999999886543210 00111000 00
Q ss_pred ccCCC--------------CccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004141 671 YGSKG--------------KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 671 ~~~~~--------------~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
+.... ...+...........+....+...+.++++|+|+++|++|..+|++++..+++.++..+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~ 365 (405)
T 3fnb_A 286 GSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGID 365 (405)
T ss_dssp ------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCC
Confidence 00000 0000000001111223333444447889999999999999999999999999999999889
Q ss_pred EEEEEeCCCCccCC--CCCChHHHHHHHHHHHHHhhC
Q 004141 737 TKVIVFPNDVHGIE--RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 737 ~~~~~~~~~~H~~~--~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++++++++..|... ..+....+.+.+.+||+++|+
T Consensus 366 ~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 366 VTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp EEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 99999976665422 355566788999999999874
No 72
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.84 E-value=2e-20 Score=198.96 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=159.8
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-C--cchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-S--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~--~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+|..+.+.+|.|.+. .++.|+||++|||++.... . .|...+..|+++||.|+++||||.+++..
T Consensus 87 ~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~------- 157 (361)
T 1jkm_A 87 ILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG------- 157 (361)
T ss_dssp EECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE-------
T ss_pred eecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCC-------
Confidence 3445666899999999742 2378999999998744332 3 45667888888999999999999653321
Q ss_pred CCccccchhhHHHHHHHHHHcC-CCCCCeEEEEEcChhHHHHHHHHhh-----CCCceeEEEecCCccchhhhhc----C
Q 004141 590 GKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQ-----APDKFVAAAARNPLCNLALMVG----T 659 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~-~~d~~ri~l~G~S~GG~~a~~~a~~-----~p~~~~~~v~~~p~~~~~~~~~----~ 659 (771)
.........|+.++++|+.++. ....++|+|+|||+||.+++.++.. +|++++++|+.+|+.+...... .
T Consensus 158 ~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~ 237 (361)
T 1jkm_A 158 HHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRL 237 (361)
T ss_dssp ECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccccc
Confidence 1122345789999999998752 0122399999999999999999987 7879999999999876510000 0
Q ss_pred CCCCcchhhhhccCCC--------CccCCCCCChhhHHHHhhcCcc----cccCCCCCcEEEEeeCCCCccCcHHHHHHH
Q 004141 660 TDIPDWCYVESYGSKG--------KDSFTESPSVEDLTRFHSKSPI----SHISKVKTPTIFLLGAQDLRVPVSNGLQYA 727 (771)
Q Consensus 660 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~P~lii~G~~D~~vp~~~~~~~~ 727 (771)
.....+. ....... ...+..... . ......+|. ..+.++. |+||++|++|.+++ +++.++
T Consensus 238 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~ 309 (361)
T 1jkm_A 238 TELPSLV--ENDGYFIENGGMALLVRAYDPTGE-H--AEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFA 309 (361)
T ss_dssp HHCTHHH--HTTTSSSCHHHHHHHHHHHSSSST-T--TTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHH
T ss_pred ccCcchh--hccCcccCHHHHHHHHHHhCCCCC-C--CCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHH
Confidence 0000000 0000000 000000000 0 000112333 2345565 99999999999997 888999
Q ss_pred HHHHhCCCCEEEEEeCCCCccCC-CC----CCh-HHHHHHHHHHHHHhh
Q 004141 728 RALREKGVETKVIVFPNDVHGIE-RP----QSD-FESFLNIGLWFKKYC 770 (771)
Q Consensus 728 ~~l~~~g~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~i~~fl~~~L 770 (771)
+.+++.|++++++++++++|.+. .. ... .++++.+.+||+++.
T Consensus 310 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 310 RRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp HHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999876 21 222 577889999998763
No 73
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.84 E-value=3.6e-21 Score=186.97 Aligned_cols=189 Identities=14% Similarity=0.109 Sum_probs=132.3
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHH---
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID--- 609 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~--- 609 (771)
..+.+++||++||.+.+ ...+...++.|...|+.|++|+.+|...|+..+..... .....+++..+.++.+++
T Consensus 18 ~~~a~~~Vv~lHG~G~~--~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 18 VQRAKKAVVMLHGRGGT--AADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp TTTCSEEEEEECCTTCC--HHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHH
T ss_pred cccCCcEEEEEeCCCCC--HHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHH
Confidence 34567899999995543 22444455666778999999999876544433221111 111123343444443332
Q ss_pred cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHH
Q 004141 610 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 689 (771)
Q Consensus 610 ~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (771)
...++++||+|+|+|+||++++.++.++|++++++|+.++...... . . ..
T Consensus 94 ~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~---------~-----------------~-~~--- 143 (210)
T 4h0c_A 94 AQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE---------L-----------------A-IG--- 143 (210)
T ss_dssp HTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSS---------C-----------------C-GG---
T ss_pred HhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChh---------h-----------------h-hh---
Confidence 2348999999999999999999999999999999998877431000 0 0 00
Q ss_pred HHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 690 RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 690 ~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
.......++|+|++||++|++||++.++++++.|++.|.++++++||+.+|.+. .+.++.+.+||.
T Consensus 144 -------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~ 209 (210)
T 4h0c_A 144 -------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTIL 209 (210)
T ss_dssp -------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTT
T ss_pred -------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHc
Confidence 000112247999999999999999999999999999999999999999999875 345677777775
No 74
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=5e-20 Score=215.44 Aligned_cols=312 Identities=12% Similarity=0.087 Sum_probs=189.2
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC----
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 121 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 121 (771)
.+.+++||+ +++.. ..+.++++++.+ ++.++++... ......+..++|||||++|||.+...+
T Consensus 20 ~~~~s~dg~-~~~~~---------~d~~i~~~~~~~--g~~~~~~~~~-~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQS---------ADNNIVLYNIET--GQSYTILSNR-TMKSVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEEC---------TTSCEEEEESSS--CCEEEEECHH-HHHTTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEEc---------CCCCEEEEEcCC--CcEEEEEccc-cccccceeeEEECCCCCeEEEEecCceeEEe
Confidence 445578994 44432 124788887643 3455554332 000012678999999999999876321
Q ss_pred -CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004141 122 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 122 -~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
....+++.+ .+++......+.... ..++|||||++|||+.
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~~~~----------~~~~~SPDG~~la~~~---------------------------- 128 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELPRPI----------QYLCWSPVGSKLAYVY---------------------------- 128 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCSSB----------CCEEECSSTTCEEEEE----------------------------
T ss_pred ecceEEEEEECCCCccccceecCccc----------ccceECCCCCEEEEEE----------------------------
Confidence 123456555 444430001112222 5899999999999973
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC-------------------ccceEEEecCCCCCccEEEE
Q 004141 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-------------------SVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-------------------~~~~~~wspDg~~~~~~l~~ 260 (771)
...|++||+.+++.++++ .... ....++|||||+. |+|
T Consensus 129 -----------------~~~i~~~~~~~g~~~~l~--~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~----la~ 185 (719)
T 1z68_A 129 -----------------QNNIYLKQRPGDPPFQIT--FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF----LAY 185 (719)
T ss_dssp -----------------TTEEEEESSTTSCCEECC--CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE----EEE
T ss_pred -----------------CCeEEEEeCCCCCcEEEe--cCCCcCCeEcccccceeeeecccCcccEEECCCCCE----EEE
Confidence 258999999999888873 2211 1147999999999 999
Q ss_pred EeecCccee-e--------------eeeee----ccCCceeEEEecccccchhhhhhhhcCCCCCCcce---ec------
Q 004141 261 VGWSSETRK-L--------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NL------ 312 (771)
Q Consensus 261 ~~~~~~~~~-~--------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~l------ 312 (771)
.+......+ . ...|. .+....|+++|+ ++++.. ++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~-----------------~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT-----------------TYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES-----------------SCHHHHCCEECCCCHHH
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC-----------------CCCCccceeEccCCccC
Confidence 885432100 0 00000 012337999998 555532 33
Q ss_pred CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeee----cCCCCCCCCccceeeEEecccccCCCCCccccc
Q 004141 313 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID----WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 313 t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
..+...+.+++|||||+ ++|..... + ....+|+++| +.+++.+.++..... ..+... ..
T Consensus 249 ~~~~~~~~~~~~SpD~~-~~~~~~~~----~--~~~~~l~~~d~~~~~~~g~~~~~~~~~~~-------~~~~~~---~~ 311 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDER-VCLQWLKR----V--QNVSVLSICDFREDWQTWDCPKTQEHIEE-------SRTGWA---GG 311 (719)
T ss_dssp HTSCEEEEEEEESSSSE-EEEEEEES----S--TTEEEEEEEEECSSSSSEECCGGGEEEEE-------CSSSCS---SS
T ss_pred CCCcceEEEeEEeCCCe-EEEEEecc----c--cCeEEEEEEcccCCCCCCceEEEEecccc-------cCCceE---cc
Confidence 23455678999999976 55553322 1 2246799999 777766554420000 000000 00
Q ss_pred CCCCCCccccCCCEEEEE-eeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeC---CCCCCeEEEEE
Q 004141 389 SSILSNPWLSDGCTMLLS-SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---PVDVPQVKYGY 464 (771)
Q Consensus 389 ~~~~~~~~s~Dg~~l~~~-~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~---~~~p~~l~~~~ 464 (771)
.....+.|||||+.|++. +..++..+||.+++++++.+.|+.....+....++ +++.|+++... ......||..+
T Consensus 312 ~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 312 FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 001267899999988874 44567788999999999988888765544455666 99999988864 12345677777
Q ss_pred ec
Q 004141 465 FV 466 (771)
Q Consensus 465 ~~ 466 (771)
+.
T Consensus 391 ~~ 392 (719)
T 1z68_A 391 IG 392 (719)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 75
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.84 E-value=6.6e-20 Score=178.84 Aligned_cols=191 Identities=11% Similarity=0.098 Sum_probs=138.7
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh----------cCCCCccc
Q 004141 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ----------SLPGKVGS 594 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~----------~~~~~~~~ 594 (771)
++.|. ..++.| ||++||.+.+ ...|...+..|+ .+|.|+++|.++....+..|.. ........
T Consensus 8 ~~~~~---~~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~ 80 (209)
T 3og9_A 8 VFKAG---RKDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD 80 (209)
T ss_dssp EEECC---CTTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH
T ss_pred EEeCC---CCCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH
Confidence 44554 345678 9999997655 446777777776 7999999996532111111111 00000011
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
...+++.+.++.+.++..+|+++++|+||||||.+++.++.++|++++++|+.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 2245556666666666567889999999999999999999999999999999988642100
Q ss_pred CCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCC
Q 004141 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
.......++|+|++||++|+++|+++++++++.|++.+.++++.+++ ++|.+.
T Consensus 142 ----------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~---- 194 (209)
T 3og9_A 142 ----------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT---- 194 (209)
T ss_dssp ----------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC----
T ss_pred ----------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC----
Confidence 00123456899999999999999999999999999999999999997 799884
Q ss_pred hHHHHHHHHHHHHHh
Q 004141 755 DFESFLNIGLWFKKY 769 (771)
Q Consensus 755 ~~~~~~~i~~fl~~~ 769 (771)
.+....+.+||++.
T Consensus 195 -~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 195 -QEEVLAAKKWLTET 208 (209)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhh
Confidence 46678999999874
No 76
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.83 E-value=9e-20 Score=210.12 Aligned_cols=246 Identities=13% Similarity=0.102 Sum_probs=168.6
Q ss_pred ccCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC----------------------------------------
Q 004141 514 TKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---------------------------------------- 551 (771)
Q Consensus 514 ~~~~g~~--l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~---------------------------------------- 551 (771)
...||.+ |.+.+|+|++ .++.|+||..||-+....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 5678999 9999999984 468999998887322100
Q ss_pred ------CCcc-----hHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC---------
Q 004141 552 ------LSSY-----SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG--------- 611 (771)
Q Consensus 552 ------~~~~-----~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--------- 611 (771)
...| ......|+++||+|+++|+||.++++.. ....+..+.+|+.++++||..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~-----~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGF-----QTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSC-----CCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCc-----CCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 0111 1345789999999999999996655432 22333456899999999998431
Q ss_pred -----CCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCC-------CCCcchh----hhhccCCC
Q 004141 612 -----LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPDWCY----VESYGSKG 675 (771)
Q Consensus 612 -----~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~-------~~~~~~~----~~~~~~~~ 675 (771)
..+.+||+|+|+||||++++.+|.++|+.++++|+.+|+.++....... ..+.+.. ...+....
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 1345799999999999999999999999999999999988654432211 0111100 00000000
Q ss_pred C---------------cc-----CCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004141 676 K---------------DS-----FTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 676 ~---------------~~-----~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
. .. ....+. ....+...++...+.+|++|+|++||..|.++|+.++.+++++++. +.
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGD--YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GH 487 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCC--CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TC
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCc--hhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CC
Confidence 0 00 000000 0123345667788999999999999999999999999999999987 66
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+.++++ ++++|.........++.+.+.+||++|||
T Consensus 488 ~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 488 AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 676655 56789864332233568899999999986
No 77
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.83 E-value=5.1e-20 Score=182.66 Aligned_cols=195 Identities=13% Similarity=0.118 Sum_probs=142.4
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEEC-------------------CCCCCCCChhhh
Q 004141 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVN-------------------YRGSLGFGEEAL 585 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d-------------------~rG~~~~g~~~~ 585 (771)
++.|+ ..++.|+||++||.+.. ...|...+..|++.||.|+++| ++|. ....
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~---~~~~- 84 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL---SPDS- 84 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC---STTC-
T ss_pred cccCC---CCCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC---Cccc-
Confidence 45565 45678999999997654 3356667777777899999984 4442 0000
Q ss_pred hcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcc
Q 004141 586 QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW 665 (771)
Q Consensus 586 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~ 665 (771)
...........+++.++++++.+ ..++.++++|+|||+||.+++.++.++|++++++|+.+|........
T Consensus 85 -~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-------- 154 (232)
T 1fj2_A 85 -QEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-------- 154 (232)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS--------
T ss_pred -ccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc--------
Confidence 00000011124556666666655 45777999999999999999999999999999999999975432110
Q ss_pred hhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC--EEEEEeC
Q 004141 666 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE--TKVIVFP 743 (771)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~--~~~~~~~ 743 (771)
+ .....+..+++|+|+++|++|..++++.++++++.+++.+.+ +++++++
T Consensus 155 -----------------~-----------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 206 (232)
T 1fj2_A 155 -----------------P-----------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYE 206 (232)
T ss_dssp -----------------C-----------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEET
T ss_pred -----------------c-----------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 0 001234567899999999999999999999999999988854 9999999
Q ss_pred CCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 744 NDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 744 ~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+++|.+. .+.++.+.+||+++|+
T Consensus 207 ~~~H~~~-----~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 207 GMMHSSC-----QQEMMDVKQFIDKLLP 229 (232)
T ss_dssp TCCSSCC-----HHHHHHHHHHHHHHSC
T ss_pred CCCcccC-----HHHHHHHHHHHHHhcC
Confidence 9999883 3556899999999874
No 78
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.83 E-value=4.8e-20 Score=183.40 Aligned_cols=211 Identities=15% Similarity=0.072 Sum_probs=153.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC---------
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--------- 591 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~--------- 591 (771)
+..+++.|.+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||.+..... .....
T Consensus 13 ~~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 13 LSVLARIPEA-----PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRHGEREGP---PPSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEESS-----CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTSTTSSCC---CCCTTSTTHHHHHH
T ss_pred EEEEEEecCC-----CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCCccCCCC---CCcccccchhhhHH
Confidence 4445777752 67999999997654 23455566778888999999999994432211 10000
Q ss_pred -ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 592 -VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 592 -~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
......+|+.++++++.+.+. ++++++|||+||.+++.++.++|+.++++++.++...... ....
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 148 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-------PQGQ---- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-------CTTC----
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh-------hhhh----
Confidence 011236788888888876642 7899999999999999999999999999888776532110 0000
Q ss_pred ccCCCCccCCCCCChhhHHHHhhcCcccccCCC-CCcEEEEeeCCCCccCcHHHHHHHHHHH-hCCC-CEEEEEeCCCCc
Q 004141 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALR-EKGV-ETKVIVFPNDVH 747 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~lii~G~~D~~vp~~~~~~~~~~l~-~~g~-~~~~~~~~~~~H 747 (771)
...+ .....+...++...+.++ ++|+|+++|++|..+|++.++.+++.+. ..+. +++++++++++|
T Consensus 149 ---------~~~~--~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 217 (238)
T 1ufo_A 149 ---------VVED--PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGH 217 (238)
T ss_dssp ---------CCCC--HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCS
T ss_pred ---------ccCC--cccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCc
Confidence 0111 224445566677777788 8999999999999999999999999999 7777 899999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHhhC
Q 004141 748 GIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.+. .+..+.+.+||.++|+
T Consensus 218 ~~~-----~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 218 TLT-----PLMARVGLAFLEHWLE 236 (238)
T ss_dssp SCC-----HHHHHHHHHHHHHHHH
T ss_pred ccH-----HHHHHHHHHHHHHHHh
Confidence 875 3567889999998873
No 79
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=8e-19 Score=180.45 Aligned_cols=263 Identities=15% Similarity=0.142 Sum_probs=181.3
Q ss_pred cceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC-CcceEEEecCCccc
Q 004141 69 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-SQLEKEFHVPQTVH 146 (771)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 146 (771)
...+.|+++++. .++..++.... ..+..++|||||++|++..+. .++.++ .+ ++..++......
T Consensus 19 ~~~~~i~~~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~-- 84 (297)
T 2ojh_A 19 SMRSSIEIFNIR--TRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSEG-----LLYRLSLAGDPSPEKVDTGFAT-- 84 (297)
T ss_dssp CCCEEEEEEETT--TTEEEEEEEES-----SCCEEEEECTTSSEEEEEETT-----EEEEEESSSCCSCEECCCTTCC--
T ss_pred CcceeEEEEeCC--CCceeeeccCC-----cceEeeEECCCCCEEEEEcCC-----eEEEEeCCCCCCceEecccccc--
Confidence 345677777753 23444444332 557899999999999987532 466655 44 554444332210
Q ss_pred ccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc
Q 004141 147 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 226 (771)
Q Consensus 147 g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 226 (771)
..+..+.|||||++|++...... ....||++++.
T Consensus 85 ------~~~~~~~~spdg~~l~~~~~~~~----------------------------------------~~~~l~~~~~~ 118 (297)
T 2ojh_A 85 ------ICNNDHGISPDGALYAISDKVEF----------------------------------------GKSAIYLLPST 118 (297)
T ss_dssp ------CBCSCCEECTTSSEEEEEECTTT----------------------------------------SSCEEEEEETT
T ss_pred ------ccccceEECCCCCEEEEEEeCCC----------------------------------------CcceEEEEECC
Confidence 11258999999999999864321 34789999999
Q ss_pred CCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004141 227 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
+++.+.+ .... .+..+.|||||+. |+|++... ....||.+++ .+
T Consensus 119 ~~~~~~~--~~~~-~~~~~~~spdg~~----l~~~~~~~------------~~~~l~~~~~-----------------~~ 162 (297)
T 2ojh_A 119 GGTPRLM--TKNL-PSYWHGWSPDGKS----FTYCGIRD------------QVFDIYSMDI-----------------DS 162 (297)
T ss_dssp CCCCEEC--CSSS-SEEEEEECTTSSE----EEEEEEET------------TEEEEEEEET-----------------TT
T ss_pred CCceEEe--ecCC-CccceEECCCCCE----EEEEECCC------------CceEEEEEEC-----------------CC
Confidence 9888777 3333 3677899999998 99877432 2237888887 77
Q ss_pred CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccc
Q 004141 307 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 386 (771)
Q Consensus 307 ~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 386 (771)
++.+.+......+..+.|||||+.|++.+..+ +..+||.++..++....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~----------------- 217 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT--------GQMQIWRVRVDGSSVERITDSAY----------------- 217 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTT--------SSCEEEEEETTSSCEEECCCCSE-----------------
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCC--------CCccEEEECCCCCCcEEEecCCc-----------------
Confidence 77788887777789999999999999987643 14578888776654433322111
Q ss_pred ccCCCCCCccccCCCEEEEEeeeC--------CeeEEEEEECCCCcEEEecC---CCCCceeeEEeecCCEEEEEEeCCC
Q 004141 387 YSSSILSNPWLSDGCTMLLSSIWG--------SSQVIISVNVSSGELLRITP---AESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 387 ~~~~~~~~~~s~Dg~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~---~~~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
....+.|+|||+.|++.+... ....|+.+|+++++.+.+.. ....+....|+++++.|+++.....
T Consensus 218 ---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 218 ---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp ---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 123568999999998887654 33679999999988776653 2334556789999999998876553
No 80
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.83 E-value=2.2e-20 Score=189.33 Aligned_cols=192 Identities=15% Similarity=0.158 Sum_probs=146.0
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+..+...+|.|.+ ++.|+||++|||++. .....|...+..|+++||.|+++|+||++.+. ....
T Consensus 48 ~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~-----------~~~~ 112 (262)
T 2pbl_A 48 GDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----------ISEI 112 (262)
T ss_dssp STTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----------HHHH
T ss_pred CCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC-----------hHHH
Confidence 3445566888863 578999999997643 23346677788899999999999999864321 1234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC------CCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.+|+.++++++..+.. ++++|+||||||.+++.++.++ |++++++|+.+|+.++....... ....
T Consensus 113 ~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~------~~~~ 183 (262)
T 2pbl_A 113 TQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS------MNEK 183 (262)
T ss_dssp HHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST------THHH
T ss_pred HHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhh------hhhh
Confidence 7899999999988742 7899999999999999999887 88999999999987654321110 0000
Q ss_pred ccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004141 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
+. .....+...+|...+.++++|+|+++|++|..+++++++.+++.+. ++++++++++|...
T Consensus 184 ~~-------------~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~ 245 (262)
T 2pbl_A 184 FK-------------MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNV 245 (262)
T ss_dssp HC-------------CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTT
T ss_pred hC-------------CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchH
Confidence 00 1123445667777788899999999999999999999999999886 78999999999766
Q ss_pred C
Q 004141 751 R 751 (771)
Q Consensus 751 ~ 751 (771)
.
T Consensus 246 ~ 246 (262)
T 2pbl_A 246 I 246 (262)
T ss_dssp T
T ss_pred H
Confidence 4
No 81
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.83 E-value=4.3e-20 Score=185.19 Aligned_cols=220 Identities=17% Similarity=0.126 Sum_probs=149.2
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..|+||++||.+.+ ...|...+..|+++||.|+++|+||.+.......... . ......+|+.++++++..+
T Consensus 20 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~-~-~~~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK-G-NPDIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH-C-CHHHHHHHHHHHHHHHHTT----
T ss_pred CCCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc-c-cHHHHHHHHHHHHHHHHHh----
Confidence 356889999997665 3467888999999999999999999544311110000 0 1112257788888888765
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhh-------
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED------- 687 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 687 (771)
.++++|+|||+||.+++.++.++|++++++++.+|............ . .+...+. ......+....
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~--~~~~~~~----~~~~~~~~~~~~~~~~~~ 164 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-L--KYAEYMN----RLAGKSDESTQILAYLPG 164 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-H--HHHHHHH----HHHTCCCCHHHHHHHHHH
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-H--HHHHHHH----hhcccCcchhhHHhhhHH
Confidence 57999999999999999999999999999999998865211000000 0 0000000 00000000000
Q ss_pred -HHHHh--hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004141 688 -LTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 688 -~~~~~--~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
...+. .......+.++++|+|+++|++|..+|++.+..+++.+... .+++++++++++|.+.......++.+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 243 (251)
T 3dkr_A 165 QLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIA 243 (251)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHH
Confidence 00000 01123456778999999999999999999999998888764 468999999999998776667789999999
Q ss_pred HHHHhh
Q 004141 765 WFKKYC 770 (771)
Q Consensus 765 fl~~~L 770 (771)
||++..
T Consensus 244 fl~~~~ 249 (251)
T 3dkr_A 244 FMQQEN 249 (251)
T ss_dssp HHHTTC
T ss_pred HHHhhc
Confidence 998753
No 82
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.82 E-value=1.9e-19 Score=174.98 Aligned_cols=194 Identities=16% Similarity=0.200 Sum_probs=147.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH--HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+|.++++++|.|.+ +.|+||++||++.. ...|.. .+..|+++||.|+++|+||. |.++....+ .
T Consensus 10 ~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g~---g~s~~~~~~--~ 77 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS-----NRRSIALFHGYSFT--SMDWDKADLFNNYSKIGYNVYAPDYPGF---GRSASSEKY--G 77 (207)
T ss_dssp EETTEEEEEEEECCTT-----CCEEEEEECCTTCC--GGGGGGGTHHHHHHTTTEEEEEECCTTS---TTSCCCTTT--C
T ss_pred eeCCcEEEEEEEeccC-----CCCeEEEECCCCCC--ccccchHHHHHHHHhCCCeEEEEcCCcc---cccCcccCC--C
Confidence 3468899999999863 56899999997765 346777 88999999999999999994 443110001 1
Q ss_pred ccc-chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004141 593 GSQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 593 ~~~-~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
... ..+++.+.+..+++. .+.++++++|||+||.+++.++.++|++++++++.+|..... +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------~------ 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------L------ 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------G------
T ss_pred CCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------h------
Confidence 122 567777777777766 345799999999999999999999999999999998862110 0
Q ss_pred cCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004141 672 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
...+.++++|+|+++|++|..++++..+.+.+.+. +++++++++++|.+..
T Consensus 140 -------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~ 190 (207)
T 3bdi_A 140 -------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVYI 190 (207)
T ss_dssp -------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHHH
T ss_pred -------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCccc
Confidence 12345677999999999999999998888887763 4789999999998653
Q ss_pred CCChHHHHHHHHHHHHH
Q 004141 752 PQSDFESFLNIGLWFKK 768 (771)
Q Consensus 752 ~~~~~~~~~~i~~fl~~ 768 (771)
. ...++.+.+.+||++
T Consensus 191 ~-~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 191 E-KPEEFVRITVDFLRN 206 (207)
T ss_dssp H-SHHHHHHHHHHHHHT
T ss_pred c-CHHHHHHHHHHHHhh
Confidence 3 345677788888864
No 83
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.82 E-value=1.7e-19 Score=176.96 Aligned_cols=197 Identities=15% Similarity=0.149 Sum_probs=141.4
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCC-----CCCC-hhhhhc-C---CCCc
Q 004141 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGS-----LGFG-EEALQS-L---PGKV 592 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vv~~d~rG~-----~~~g-~~~~~~-~---~~~~ 592 (771)
++.|+ ..++.|+||++||.+.. ...|...+..|++ .||.|+++|++|. .+++ ..|... . ....
T Consensus 5 ~~~~~---~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~ 79 (218)
T 1auo_A 5 LILQP---AKPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI 79 (218)
T ss_dssp EEECC---SSCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE
T ss_pred eecCC---CCCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc
Confidence 44454 45678999999997755 4467788889988 9999999997741 0000 000000 0 0001
Q ss_pred cccc----hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHh-hCCCceeEEEecCCccchhhhhcCCCCCcchh
Q 004141 593 GSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCY 667 (771)
Q Consensus 593 ~~~~----~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~ 667 (771)
.... .+++...++++.+ ..++.++++++|||+||.+++.++. ++|++++++|+.+|.... ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------~~~----- 147 (218)
T 1auo_A 80 SLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT------FGD----- 147 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT------CCT-----
T ss_pred chHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC------chh-----
Confidence 1112 3444455555544 3477889999999999999999999 999999999999997543 000
Q ss_pred hhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCc
Q 004141 668 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 747 (771)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H 747 (771)
.. ......+++|+|+++|++|..+|++.++.+++.+++.|.++++++++ ++|
T Consensus 148 ----~~-----------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH 199 (218)
T 1auo_A 148 ----EL-----------------------ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGH 199 (218)
T ss_dssp ----TC-----------------------CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSS
T ss_pred ----hh-----------------------hhhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCC
Confidence 00 00113457899999999999999999999999999988899999999 999
Q ss_pred cCCCCCChHHHHHHHHHHHHHhhC
Q 004141 748 GIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.+. .+..+.+.+||.++|+
T Consensus 200 ~~~-----~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 200 EVL-----PQEIHDIGAWLAARLG 218 (218)
T ss_dssp SCC-----HHHHHHHHHHHHHHHC
T ss_pred ccC-----HHHHHHHHHHHHHHhC
Confidence 875 3567899999999875
No 84
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.82 E-value=6.6e-19 Score=174.03 Aligned_cols=184 Identities=20% Similarity=0.248 Sum_probs=138.5
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCCC----------------CCChhhhhcCCCCccc
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSL----------------GFGEEALQSLPGKVGS 594 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vv~~d~rG~~----------------~~g~~~~~~~~~~~~~ 594 (771)
+.++.|+||++||++.. ...|...+..|++ .||.|+++|++|.+ ++|.+ .....
T Consensus 20 ~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~------~~~~~ 91 (226)
T 3cn9_A 20 APNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA------RAIDE 91 (226)
T ss_dssp CTTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST------TCBCH
T ss_pred CCCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc------ccccc
Confidence 55678999999997755 3467788888988 99999999988521 12211 01111
Q ss_pred cchh----hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHh-hCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004141 595 QDVN----DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 595 ~~~~----D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
..+. ++...++.+.+ ..++.++++|+|||+||.+++.++. ++|++++++|+.+|........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------ 158 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC------------
T ss_pred hhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh------------
Confidence 2233 34444444433 2467789999999999999999999 9999999999999875432110
Q ss_pred hccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004141 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
.. ....+++|+|+++|++|..+|++.++++++.+...|.++++++++ ++|.+
T Consensus 159 -----------------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~ 210 (226)
T 3cn9_A 159 -----------------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEV 210 (226)
T ss_dssp -----------------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSC
T ss_pred -----------------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCc
Confidence 00 013567899999999999999999999999999988899999999 99987
Q ss_pred CCCCChHHHHHHHHHHHHHhh
Q 004141 750 ERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~fl~~~L 770 (771)
. .+..+.+.+||+++|
T Consensus 211 ~-----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 211 S-----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred c-----hhhHHHHHHHHHhhC
Confidence 4 356788999999875
No 85
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.81 E-value=5.1e-19 Score=179.93 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=148.9
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... .. .......+|+.++++++..+ .
T Consensus 39 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---~~-~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM---ER-TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHH---HT-CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccc---cc-CCHHHHHHHHHHHHHHHHhh----C
Confidence 45999999997665 346788899999999999999999954432211 11 11122367788888887655 5
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC----CCcchhhhhccCCCCc------cCCCCCCh
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----IPDWCYVESYGSKGKD------SFTESPSV 685 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~ 685 (771)
++++|+|||+||.+++.++.++|+ ++++|+.+|............ ...+. ..+...... .+...+ .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 184 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYL--DSIGSDLKNPDVKELAYEKTP-T 184 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEE--ECCCCCCSCTTCCCCCCSEEE-H
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHH--HHhCccccccchHhhcccccC-h
Confidence 789999999999999999999999 999999999776543221110 11110 000100000 000000 0
Q ss_pred hhHHHHh--hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHH
Q 004141 686 EDLTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 763 (771)
Q Consensus 686 ~~~~~~~--~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 763 (771)
.....+. .......+.++++|+|+++|++|..+|++.+..+++.+.. .+++++++++++|.+.......++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 185 ASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 1011110 0112245677899999999999999999999998887754 35799999999999876665568899999
Q ss_pred HHHHHhh
Q 004141 764 LWFKKYC 770 (771)
Q Consensus 764 ~fl~~~L 770 (771)
+||+++.
T Consensus 263 ~fl~~~~ 269 (270)
T 3rm3_A 263 EFFAKHA 269 (270)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999875
No 86
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.81 E-value=6e-19 Score=183.42 Aligned_cols=238 Identities=14% Similarity=0.245 Sum_probs=149.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+...++.+.. ..+..|+||++||++.. ...|...+..|+++||.|+++|+||. |.+... ......
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~----~~~~~~ 96 (315)
T 4f0j_A 28 QGQPLSMAYLDVAP--KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVGF---CKSSKP----AHYQYS 96 (315)
T ss_dssp TTEEEEEEEEEECC--SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC----SSCCCC
T ss_pred CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCCC---CCCCCC----CccccC
Confidence 34445544444432 34567999999997765 34688889999999999999999994 443211 112345
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCC---cch-------
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP---DWC------- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~---~~~------- 666 (771)
.+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|.............. .+.
T Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
T 4f0j_A 97 FQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTS 174 (315)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCC
Confidence 77777777777776 355789999999999999999999999999999999864211100000000 000
Q ss_pred ------hhh-hccCC-CCcc----------CCCCCChh--------hHHHHhhcCcccccCCCCCcEEEEeeCCCCccCc
Q 004141 667 ------YVE-SYGSK-GKDS----------FTESPSVE--------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPV 720 (771)
Q Consensus 667 ------~~~-~~~~~-~~~~----------~~~~~~~~--------~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~ 720 (771)
+.. .+... .... ........ ........+....+.++++|+|+++|++|..+|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~ 254 (315)
T 4f0j_A 175 AEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIG 254 (315)
T ss_dssp HHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTT
T ss_pred hHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcc
Confidence 000 00000 0000 00000000 0111122334456788999999999999999994
Q ss_pred HHH------------HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 721 SNG------------LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 721 ~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
++. .+..+.+.+...++++++++++||.+.. +...++.+.|.+||++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 255 KDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQI-QAPERFHQALLEGLQT 313 (315)
T ss_dssp GGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHH-HSHHHHHHHHHHHHCC
T ss_pred ccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhh-hCHHHHHHHHHHHhcc
Confidence 433 3444444444456899999999997653 3445778888888864
No 87
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.81 E-value=1.9e-19 Score=182.77 Aligned_cols=198 Identities=19% Similarity=0.206 Sum_probs=141.0
Q ss_pred EEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCC---CCCCCChhhhhc--CCCCcccc-
Q 004141 524 IFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYR---GSLGFGEEALQS--LPGKVGSQ- 595 (771)
Q Consensus 524 ~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vv~~d~r---G~~~~g~~~~~~--~~~~~~~~- 595 (771)
+...|. .+.++.|+||++||.+.+ ...|...++.|+.+ ++.+++|+-+ ...+.|..|... ........
T Consensus 55 y~~~p~--~~~~~~plVI~LHG~G~~--~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 55 FGRRGA--APGEATSLVVFLHGYGAD--GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp EEEEES--CTTCCSEEEEEECCTTBC--HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred eecCCC--CCCCCCcEEEEEcCCCCC--HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 344554 267788999999995543 23444455666543 8899998743 112234443210 00000011
Q ss_pred ------chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004141 596 ------DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 596 ------~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
...++.+.++.+.++..+|++||+|+|+|+||.+++.++.++|+.++++|+.++....
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------------- 194 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC----------------
Confidence 1334556666666666699999999999999999999999999999999988764210
Q ss_pred hccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004141 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
.+... .....++|+|++||+.|++||++.++++++.|++.|.++++++|++.+|.+
T Consensus 195 ---------------~~~~~---------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i 250 (285)
T 4fhz_A 195 ---------------PERLA---------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI 250 (285)
T ss_dssp ---------------HHHHH---------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC
T ss_pred ---------------chhhh---------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Confidence 01000 012346899999999999999999999999999999999999999999987
Q ss_pred CCCCChHHHHHHHHHHHHHhh
Q 004141 750 ERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~fl~~~L 770 (771)
. .+.+..+.+||+++|
T Consensus 251 ~-----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 251 A-----PDGLSVALAFLKERL 266 (285)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHHHHHHHHC
Confidence 5 456789999999987
No 88
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.81 E-value=2.7e-19 Score=193.05 Aligned_cols=229 Identities=14% Similarity=0.094 Sum_probs=151.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|. ..++.|+||++||.+... ...+......|+++||.|+++|+|| +|.+.... ...+
T Consensus 176 ~g~~l~~~~~~P~---~~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G---~G~s~~~~-----~~~~ 243 (415)
T 3mve_A 176 EKGKITAHLHLTN---TDKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPS---VGYSSKYP-----LTED 243 (415)
T ss_dssp SSSEEEEEEEESC---SSSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTT---SGGGTTSC-----CCSC
T ss_pred CCEEEEEEEEecC---CCCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCC---CCCCCCCC-----CCCC
Confidence 5788999999997 356789999999966442 1234445677889999999999999 45443211 1112
Q ss_pred h-hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh-h-cCCCCCcchhhhhccC
Q 004141 597 V-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-V-GTTDIPDWCYVESYGS 673 (771)
Q Consensus 597 ~-~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~-~-~~~~~~~~~~~~~~~~ 673 (771)
. .....+++++.....+|.++|+|+|||+||++++.++..+|++++++|+.+|+.+.... . .....+. .+...+..
T Consensus 244 ~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 322 (415)
T 3mve_A 244 YSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPK-MYLDVLAS 322 (415)
T ss_dssp TTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHH-HHHHHHHH
Confidence 2 23356677777776678899999999999999999999999999999999998642211 0 0000010 00000000
Q ss_pred CCCccCCCCC-Chh-hHHHHhhcCcccc----cCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC-CC
Q 004141 674 KGKDSFTESP-SVE-DLTRFHSKSPISH----ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DV 746 (771)
Q Consensus 674 ~~~~~~~~~~-~~~-~~~~~~~~sp~~~----~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~-~~ 746 (771)
.+...+ ... ....+...++... +.++++|+|+++|++|.++|++++..+.+ .+.+++++++++ ..
T Consensus 323 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~l~~i~g~~~ 394 (415)
T 3mve_A 323 ----RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTYGKAKKISSKTI 394 (415)
T ss_dssp ----HTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTTCEEEEECCCSH
T ss_pred ----HhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCCceEEEecCCCc
Confidence 000000 111 1112222333221 45788999999999999999988877665 456689999998 33
Q ss_pred ccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 747 HGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
|. ...+.+..+.+||+++|+
T Consensus 395 h~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 395 TQ-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHT
T ss_pred cc-----chHHHHHHHHHHHHHHhc
Confidence 32 345788899999999874
No 89
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.81 E-value=3.2e-19 Score=175.94 Aligned_cols=198 Identities=16% Similarity=0.126 Sum_probs=142.2
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcC-CCC----c
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-PGK----V 592 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~-~~~----~ 592 (771)
+.++...++.|. ....|+||++||++.. ...|......|++ ||.|+++|.++..+.|..+.... ... .
T Consensus 15 ~~~l~~~~~~~~----~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 15 DLAFPYRLLGAG----KESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSSCEEEESTT----SSCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCCceEEEeCCC----CCCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 344555555553 2234999999997655 3467777777765 99999999876322122221110 000 0
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004141 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
.....+++.+.++++.++..+++++++|+|||+||.+++.++.++|++++++|+.+|.....
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------ 149 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------
Confidence 01224566677777766645788999999999999999999999999999999998864210
Q ss_pred CCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC
Q 004141 673 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 752 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 752 (771)
. . .....+++|+|+++|++|..+|++.++ +++.+++.|.++++++++ ++|.+.
T Consensus 150 ~---------~--------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~-- 202 (223)
T 3b5e_A 150 H---------V--------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG-- 202 (223)
T ss_dssp S---------C--------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC--
T ss_pred c---------c--------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC--
Confidence 0 0 012345789999999999999999999 999999999999999999 999875
Q ss_pred CChHHHHHHHHHHHHHhh
Q 004141 753 QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 753 ~~~~~~~~~i~~fl~~~L 770 (771)
.+..+.+.+||++.+
T Consensus 203 ---~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ---DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ---HHHHHHHHHHHHCC-
T ss_pred ---HHHHHHHHHHHHhhh
Confidence 345678999997654
No 90
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.1e-19 Score=193.73 Aligned_cols=261 Identities=16% Similarity=0.118 Sum_probs=171.3
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
...++|||||++|||+...+ +..++|.++ .+++.++++...... ...+.|||||++|+|++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~---------~~~~~~spdg~~l~~~~~~------ 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDN---------TFGGFISTDERAFFYVKNE------ 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBC---------TTTCEECTTSSEEEEEETT------
T ss_pred eecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCc---------cccceECCCCCEEEEEEcC------
Confidence 56789999999999998764 556788887 555555544322211 1248899999999998532
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
.+|+++|+++++.+.+. .... .|+|||+. |+
T Consensus 102 --------------------------------------~~l~~~d~~~~~~~~~~--~~~~-----~~~~~g~~----l~ 132 (396)
T 3c5m_A 102 --------------------------------------LNLMKVDLETLEEQVIY--TVDE-----EWKGYGTW----VA 132 (396)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEE--ECCT-----TEEEEEEE----EE
T ss_pred --------------------------------------CcEEEEECCCCCcEEEE--eccc-----ccCCCCCE----EE
Confidence 36999999999888773 2111 16677766 66
Q ss_pred EEeec-------------Ccceeeeeee--eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceee
Q 004141 260 FVGWS-------------SETRKLGIKY--CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 324 (771)
Q Consensus 260 ~~~~~-------------~~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~ 324 (771)
|.+.. .+...+.... .......||++|+ .+++.+.++.....+..+.|
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~-----------------~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI-----------------ETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET-----------------TTCCEEEEEEESSCEEEEEE
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC-----------------CCCcEEeeccCCcccccceE
Confidence 64211 0000000000 0024458999998 77888877766666888999
Q ss_pred cC-CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004141 325 SP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 325 Sp-DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l 403 (771)
|| ||++|+|.+... ......+|+++|+.+++.+.++..... ..+..+.|||||+.|
T Consensus 196 sp~dg~~l~~~~~~~-----~~~~~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGP-----HDLVDARMWLVNEDGSNVRKIKEHAEG------------------ESCTHEFWIPDGSAM 252 (396)
T ss_dssp ETTEEEEEEEEECSC-----SSSCSCCCEEEETTSCCCEESSCCCTT------------------EEEEEEEECTTSSCE
T ss_pred CCCCCCEEEEEecCC-----CCCCCceEEEEECCCCceeEeeccCCC------------------ccccceEECCCCCEE
Confidence 99 899999998532 111125799999887665444321100 012356899999999
Q ss_pred EEEeeeCCee--EEEEEECCCCcEEEecCCCCCceeeEEee-cCCEEEEEEeC------------CCCCCeEEEEEeccc
Q 004141 404 LLSSIWGSSQ--VIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSS------------PVDVPQVKYGYFVDK 468 (771)
Q Consensus 404 ~~~~~~~~~~--~l~~~d~~tg~~~~l~~~~~~~~~~~~s~-dg~~l~~~~~~------------~~~p~~l~~~~~~~~ 468 (771)
++.+...+.. .|+.+|+.+++.+.+..... .. ..|++ ||+.+++..+. ......||+.++.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 8887765554 49999999999888765433 23 78999 99976664432 112367888886544
No 91
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.81 E-value=7.8e-20 Score=190.18 Aligned_cols=226 Identities=18% Similarity=0.187 Sum_probs=151.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+| .+.+++| +. .++.|+||++|||++... ...+...+..|+ +.||.|+++||||.+++. .
T Consensus 64 ~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~-----------~ 126 (311)
T 1jji_A 64 RNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-----------F 126 (311)
T ss_dssp TTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-----------T
T ss_pred CCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC-----------C
Confidence 344 7888888 42 456799999999885432 345677788887 689999999999965431 1
Q ss_pred ccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhh----cCCCC
Q 004141 594 SQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMV----GTTDI 662 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~----~~~~~ 662 (771)
....+|+.++++++.+. ..+++++|+|+|||+||.+++.++.++++. ++++|+.+|+.+..... .....
T Consensus 127 p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~ 206 (311)
T 1jji_A 127 PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEG 206 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSS
T ss_pred CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHHhcCC
Confidence 23478888999988875 236778999999999999999999877665 99999999987643110 00000
Q ss_pred Cc-c--hhhhhccCCCCccCCCCCChhhHHHHhhcCccc-ccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 663 PD-W--CYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 663 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. + .....+. ..+.... . .......+|+. .+..+ +|+||++|+.|.++ .++..+++.|++.|++++
T Consensus 207 ~~~~~~~~~~~~~----~~~~~~~--~-~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~l~~~g~~~~ 276 (311)
T 1jji_A 207 LWILDQKIMSWFS----EQYFSRE--E-DKFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQMLRRAGVEAS 276 (311)
T ss_dssp CSSCCHHHHHHHH----HHHCSSG--G-GGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEE
T ss_pred CccCCHHHHHHHH----HHhCCCC--c-cCCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHHHHHcCCCEE
Confidence 00 0 0000000 0000000 0 00011223432 22233 69999999999998 477889999999999999
Q ss_pred EEEeCCCCccCCCC----CChHHHHHHHHHHHHH
Q 004141 739 VIVFPNDVHGIERP----QSDFESFLNIGLWFKK 768 (771)
Q Consensus 739 ~~~~~~~~H~~~~~----~~~~~~~~~i~~fl~~ 768 (771)
++++++++|.+... ....++++.+.+||++
T Consensus 277 ~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 277 IVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999999987532 2345678888899874
No 92
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.81 E-value=8.4e-20 Score=187.35 Aligned_cols=233 Identities=12% Similarity=0.059 Sum_probs=152.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch---HHHHHHHHCCcEEEEECCC--CCC---------CC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS---KSLAFLSSVGYSLLIVNYR--GSL---------GF 580 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~---~~~~~la~~G~~Vv~~d~r--G~~---------~~ 580 (771)
...|.++.+.+|.|++.. .+++|+||++||++.... .|. .....+++.||.|+++|.+ |.+ ++
T Consensus 30 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~--~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~ 106 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQ--NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQ 106 (283)
T ss_dssp TTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCSH--HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBT
T ss_pred hhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCcc--chhhcccHHHHHhhCCeEEEEeccccccccccccccccccC
Confidence 345788999999998654 678999999999876532 332 2345667889999999964 432 12
Q ss_pred ChhhhhcCC-CCcc-ccchhhH-H-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh
Q 004141 581 GEEALQSLP-GKVG-SQDVNDV-L-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 581 g~~~~~~~~-~~~~-~~~~~D~-~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~ 656 (771)
|.++..... ..+. .....+. . +.+.++.+.. .+.+|++|+||||||++|+.++.++|++|+++++.+|+++....
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~ 185 (283)
T 4b6g_A 107 SAGFYLNATEQPWAANYQMYDYILNELPRLIEKHF-PTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV 185 (283)
T ss_dssp TBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHS-CEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGS
T ss_pred CCcccccCccCcccchhhHHHHHHHHHHHHHHHhC-CCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccC
Confidence 222111111 0110 0111221 2 2334444443 24689999999999999999999999999999999998764321
Q ss_pred hcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCC--CCcEEEEeeCCCCccCc-HHHHHHHHHHHhC
Q 004141 657 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPV-SNGLQYARALREK 733 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~lii~G~~D~~vp~-~~~~~~~~~l~~~ 733 (771)
... ...+...++. ....+...+|...+.++ .+|+|++||+.|.+++. .+++.++++|++.
T Consensus 186 ~~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~ 248 (283)
T 4b6g_A 186 PWG----EKAFTAYLGK-------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA 248 (283)
T ss_dssp HHH----HHHHHHHHCS-------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHH
T ss_pred cch----hhhHHhhcCC-------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHc
Confidence 000 0000011111 11223344555444444 35999999999999986 2388999999999
Q ss_pred CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 734 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
|+++++.++|+++|.+. .....+..+++|+.++|+
T Consensus 249 g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 249 NQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp TCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred CCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 99999999999999863 223567889999999885
No 93
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.81 E-value=1.2e-19 Score=183.77 Aligned_cols=231 Identities=13% Similarity=0.056 Sum_probs=149.3
Q ss_pred CCCceEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCCcchH--HHHHH-HHCCcEEEEECCCCCCCCChhhhhcC
Q 004141 516 GAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSK--SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSL 588 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~----~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~l-a~~G~~Vv~~d~rG~~~~g~~~~~~~ 588 (771)
..|.++.+++|.|++.+ +.++.|+||++||++.. ...|.. .+..+ .+.||.|+++|+++++..... .
T Consensus 16 ~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~ 89 (263)
T 2uz0_A 16 VLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--HNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQ----Y 89 (263)
T ss_dssp TTTEEEEEEEEECC---------CCBCEEEEECCTTCC--TTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCT----T
T ss_pred hhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--HHHHHhccCHHHHHhcCCeEEEEECCCCCccccCC----C
Confidence 35678999999998652 35678999999998765 334544 24444 458999999999875432110 0
Q ss_pred CCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCC-Ccch-
Q 004141 589 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-PDWC- 666 (771)
Q Consensus 589 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~-~~~~- 666 (771)
.........+|+...++.+..+..+++++++|+|||+||++++.++. +|++++++|+.+|..+...+...... ....
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 2uz0_A 90 GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQNLGSPAY 168 (263)
T ss_dssp SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGTTCSCHHH
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccccccccchh
Confidence 00111111344555554443323457899999999999999999999 89999999999998765431100000 0000
Q ss_pred hhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 667 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
....++. . ....+...+|...+.+++ +|+|++||++|.++ ..++.+++.+++.|.+++++++++
T Consensus 169 ~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~g~~~~~~~~~g 234 (263)
T 2uz0_A 169 WRGVFGE---------I---RDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY--EANNLAVKNLKKLGFDVTYSHSAG 234 (263)
T ss_dssp HHHHHCC---------C---SCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH--HHHHHHHHHHHHTTCEEEEEEESC
T ss_pred HHHHcCC---------h---hhhccccCCHHHHHHhccCCCeEEEEeCCCchhh--HHHHHHHHHHHHCCCCeEEEECCC
Confidence 0000110 0 001223445555555554 79999999999998 457899999999999999999999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+|.+.. ..+.+..+++||.++|+
T Consensus 235 -~H~~~~---~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 235 -THEWYY---WEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp -CSSHHH---HHHHHHHHHHHSSSCCC
T ss_pred -CcCHHH---HHHHHHHHHHHHHhhcc
Confidence 997531 23667889999987764
No 94
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.81 E-value=6.8e-19 Score=173.89 Aligned_cols=183 Identities=14% Similarity=0.183 Sum_probs=139.6
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEE--CCCCCCCCChhhh-h-cCCCCcc----ccchhhHHHHHHH
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL-Q-SLPGKVG----SQDVNDVLTAIDH 606 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~--d~rG~~~~g~~~~-~-~~~~~~~----~~~~~D~~~~i~~ 606 (771)
++.|+||++||++.. ...|...+..|++ ||.|+++ |++|. |.+.. . .....+. ..++.++.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLEN---GMPRFFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEET---TEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccCC---cchhhccccCccCcChhhHHHHHHHHHHHHHH
Confidence 568999999997765 4467778888877 9999999 77773 33210 0 0011111 1124456666666
Q ss_pred HHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChh
Q 004141 607 VIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVE 686 (771)
Q Consensus 607 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (771)
+.++..++.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6777667889999999999999999999999999999999998743110
Q ss_pred hHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 687 DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 687 ~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
......+++|+|+++|++|..++++.++.+++.+.+.+.++++ ++++++|.+. .+....+.+||
T Consensus 159 ----------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l 222 (226)
T 2h1i_A 159 ----------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWY 222 (226)
T ss_dssp ----------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHH
T ss_pred ----------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHH
Confidence 0112234789999999999999999999999999988888888 9999999874 46788999999
Q ss_pred HHhh
Q 004141 767 KKYC 770 (771)
Q Consensus 767 ~~~L 770 (771)
.++|
T Consensus 223 ~~~l 226 (226)
T 2h1i_A 223 DKAF 226 (226)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9875
No 95
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.81 E-value=6.4e-19 Score=179.15 Aligned_cols=206 Identities=11% Similarity=-0.031 Sum_probs=144.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----cchHHHHHHHHC----CcEEEEECCCCCCCCChhhhhc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSV----GYSLLIVNYRGSLGFGEEALQS 587 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----~~~~~~~~la~~----G~~Vv~~d~rG~~~~g~~~~~~ 587 (771)
.|.++.+++|.|+++...+++|+||++||++...... .+...++.|+++ ||.|+++|+++.+.. .
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~---~--- 115 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPG---I--- 115 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTT---C---
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcc---c---
Confidence 5678999999999766677899999999977543211 123346777776 599999999984321 0
Q ss_pred CCCCccccchhh-HHHHHHHHHHcCCC--CCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCc
Q 004141 588 LPGKVGSQDVND-VLTAIDHVIDMGLA--NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 664 (771)
Q Consensus 588 ~~~~~~~~~~~D-~~~~i~~l~~~~~~--d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~ 664 (771)
...+ ....++ +.++++++.++..+ |++|++|+|+|+||++++.++.++|++|+++++.+|..+....
T Consensus 116 -~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~-------- 185 (268)
T 1jjf_A 116 -ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN-------- 185 (268)
T ss_dssp -SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH--------
T ss_pred -cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch--------
Confidence 0001 011233 34556666665444 7899999999999999999999999999999999987542110
Q ss_pred chhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCC-cEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC
Q 004141 665 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 743 (771)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 743 (771)
...+.. .. . ....+. |+|++||+.|.++|. ++.+++.|++.|+++++++++
T Consensus 186 ---~~~~~~---------~~-~-------------~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~ 237 (268)
T 1jjf_A 186 ---ERLFPD---------GG-K-------------AAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQ 237 (268)
T ss_dssp ---HHHCTT---------TT-H-------------HHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEET
T ss_pred ---hhhcCc---------ch-h-------------hhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEcC
Confidence 000000 00 0 001123 599999999999973 778999999999999999999
Q ss_pred CCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 744 NDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 744 ~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++|.+. .....+..+++||.++
T Consensus 238 g~~H~~~---~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 238 GGGHDFN---VWKPGLWNFLQMADEA 260 (268)
T ss_dssp TCCSSHH---HHHHHHHHHHHHHHHH
T ss_pred CCCcCHh---HHHHHHHHHHHHHHhc
Confidence 9999863 1235567888998775
No 96
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.81 E-value=7.6e-19 Score=184.02 Aligned_cols=219 Identities=16% Similarity=0.228 Sum_probs=150.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
+.++++.|.+ ++.|+||++|||++... ...|...+..|+ +.||.|+++||||++++. ....++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~-----------~~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH-----------IDDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC-----------HHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC-----------chHHHH
Confidence 5567788863 45799999999875432 334556677776 569999999999965431 123478
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004141 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
|+.++++++.++ ++.++++|+|||+||.+|+.++.++|+. ++++|+.+|+.+...... .... ..... ..
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~--~~~~-~~~~~-~~- 221 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNK--DISD-ALIEQ-DA- 221 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT--TCCH-HHHHH-CS-
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCCh--hHHh-hhccc-Cc-
Confidence 999999999887 6788999999999999999999887766 999999999876432100 0000 00000 00
Q ss_pred CCccCCCCCChhhH----HHH--------hhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004141 675 GKDSFTESPSVEDL----TRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 675 ~~~~~~~~~~~~~~----~~~--------~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
....... ..+ ...+|+...-...+|+||++|++|..+ .++..+.+.+++.+.+++++++
T Consensus 222 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~~~~~~~~~~ 292 (326)
T 3d7r_A 222 -------VLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTH--PDMKLFEQMMLQHHQYIEFYDY 292 (326)
T ss_dssp -------SCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEE
T ss_pred -------ccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccch--HHHHHHHHHHHHCCCcEEEEEe
Confidence 0000000 000 112232211112269999999999744 5778899999999999999999
Q ss_pred CCCCccCCC--CCChHHHHHHHHHHHHHhh
Q 004141 743 PNDVHGIER--PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 743 ~~~~H~~~~--~~~~~~~~~~i~~fl~~~L 770 (771)
++++|.+.. .+...++.+.+.+||++++
T Consensus 293 ~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 293 PKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp TTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 999998765 2445578889999998776
No 97
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=4.7e-18 Score=206.70 Aligned_cols=328 Identities=11% Similarity=0.013 Sum_probs=210.2
Q ss_pred ceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccc-------eEEEeCCCCCeEE
Q 004141 42 KAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGA-------SAVVPSPSGSKLL 114 (771)
Q Consensus 42 ~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~-------~~~~~SPdG~~la 114 (771)
.....+..||||++|+|...... ......||++++. +++.++|+..+ ..+ ..++|||||+ ++
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~---~~~~~~i~~~d~~--~g~~~~lt~~~-----~~~~~~~~~~~~~~~SpDg~-ll 121 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGS---SLNTADLYFYNGE--NGEIKRITYFS-----GKSTGRRMFTDVAGFDPDGN-LI 121 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEEST---TCCEEEEEEEETT--TTEEEECCCCC-----EEEETTEECSEEEEECTTCC-EE
T ss_pred CcccCeEECCCCCEEEEEEeecc---CCCCCeEEEEECC--CCCeEEcccCC-----CcccccccccccccCCCCCE-EE
Confidence 34557778999999999875421 1234688888763 44566776543 334 7899999998 77
Q ss_pred EEecCCC---CCCeEEEEe-cCCcceEEEecC------------------------------------------------
Q 004141 115 VVRNPEN---ESPIQFELW-SQSQLEKEFHVP------------------------------------------------ 142 (771)
Q Consensus 115 ~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~------------------------------------------------ 142 (771)
|++.... ...++|.++ .++...+++...
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 8776431 234577666 343322211100
Q ss_pred --------------------Cccccccc-------------CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC
Q 004141 143 --------------------QTVHGSVY-------------ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 189 (771)
Q Consensus 143 --------------------~~~~g~~~-------------~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 189 (771)
.+....+| ....+..++|||||++|+|..... -..|... ....
T Consensus 202 ~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~---i~~~d~~-~~~l 277 (1045)
T 1k32_A 202 MSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS---IYIFNPD-TEKI 277 (1045)
T ss_dssp CSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTE---EEEECTT-TCCE
T ss_pred CCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCE---EEEecCC-ceEe
Confidence 00000010 011233567888888888864211 0011110 0000
Q ss_pred CCCc-----------cCCCCCCccccc-CCcCcccCCccCceEEEEEccCCceeeccCCCCCC-ccceEEEecCCCCCcc
Q 004141 190 SSDK-----------DCNSWKGQGDWE-EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 190 ~~~~-----------~~~~~~~~~~~~-~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-~~~~~~wspDg~~~~~ 256 (771)
.... .+......+.|+ +|.... +......|+++++.+++.+.+ ..... .+..++|| ||+.
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~l-a~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-dg~~--- 350 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLI-AFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-TKVA--- 350 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCE-EEEETTEEEEECTTSSBEEEC--SCCSCEEEEEECSS-SEEE---
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEE-EEEEcCEEEEEcCCCCceEEc--cCCCcceEEeeeEc-CCCe---
Confidence 0000 011123456688 885433 333477999999999988887 44444 67889999 9998
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeE-EEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALY-AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+|.+. ..+|| ++++ .+++.+.++.+...+..+.|||||++|++.+
T Consensus 351 -l~~~s~---------------~~~l~~~~d~-----------------~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 351 -FIHGTR---------------EGDFLGIYDY-----------------RTGKAEKFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp -EEEEET---------------TEEEEEEEET-----------------TTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred -EEEEEC---------------CCceEEEEEC-----------------CCCCceEecCCccceeeeEECCCCCEEEEEC
Confidence 998872 23799 9998 7778888885556788999999999999887
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC-----
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG----- 410 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~----- 410 (771)
.+. .|+++|+.+++.+.+.... ...+..++|||||++|++.....
T Consensus 398 ~~~-----------~v~~~d~~tg~~~~~~~~~-------------------~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 398 DRF-----------EIMTVDLETGKPTVIERSR-------------------EAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp TTS-----------EEEEEETTTCCEEEEEECS-------------------SSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CCC-----------eEEEEECCCCceEEeccCC-------------------CCCccceEECCCCCeEEEEecCcccccc
Confidence 652 5999999887654332111 01245789999999998877643
Q ss_pred --CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCC
Q 004141 411 --SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 411 --~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~ 454 (771)
....|+.+|++++++..++........+.|++||+.|++.....
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 34679999999999888887655555678999999999877543
No 98
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.80 E-value=9.7e-19 Score=165.28 Aligned_cols=174 Identities=11% Similarity=0.146 Sum_probs=128.2
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+++|+||++||.+.......+......|+++||.|+++|+|| +|.+.... ......+++..+++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~----~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTD---LDARRDLG----QLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHH---HHTCGGGC----TTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCC---CCCCCCCC----CCCCHHHHHHHHHHHHHhcC--C
Confidence 457899999997765332234467888999999999999998 44332111 11112344455566666553 3
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 694 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (771)
.++++++|||+||.+++.++.++| ++++|+.+|......+ +
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------~----------- 113 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------P----------- 113 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------C-----------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------C-----------
Confidence 578999999999999999999988 9999998887542100 0
Q ss_pred CcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 695 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 695 sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
.+..+++|+|+++|++|..+|++.++++++.+ +++++++ +++|.+. +...++.+.+.+||++
T Consensus 114 ----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 114 ----ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp ----CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred ----cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 04567899999999999999999999998887 3678888 8999873 5566788888888864
No 99
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.80 E-value=4.8e-19 Score=183.71 Aligned_cols=216 Identities=17% Similarity=0.186 Sum_probs=146.4
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHHCCcEEEEECCCCCCC---------C--Ch
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLG---------F--GE 582 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~Vv~~d~rG~~~---------~--g~ 582 (771)
..+|.++.+++|.|.+. ..+.|+||++||++... ..| ......++++||.|+++|+|+... + |.
T Consensus 34 ~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp -CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 56788999999999742 34679999999987653 234 445677888999999999996411 1 11
Q ss_pred hhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC-ceeEEEecC-CccchhhhhcCC
Q 004141 583 EALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARN-PLCNLALMVGTT 660 (771)
Q Consensus 583 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~-p~~~~~~~~~~~ 660 (771)
+. .........++|+.++++++.++..++.++|+|+|||+||++++.++.++|+ .++++|+.+ |..++...
T Consensus 110 s~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~~~~---- 182 (304)
T 3d0k_A 110 AG---NPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTLPTF---- 182 (304)
T ss_dssp TS---CBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCCSST----
T ss_pred cC---CCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccccCCc----
Confidence 10 0101112345789999999998766889999999999999999999999985 788888655 54432211
Q ss_pred CCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccC-----------------cHHH
Q 004141 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVP-----------------VSNG 723 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp-----------------~~~~ 723 (771)
...|. ++. ... ..+|......+++|+|++||+.|..+. .+.+
T Consensus 183 -~~~~~----~~~------~~~----------~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (304)
T 3d0k_A 183 -EHRFP----EGL------DGV----------GLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARA 241 (304)
T ss_dssp -TSBTT----TSS------BTT----------TCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHH
T ss_pred -cccCc----ccc------CCC----------CCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHH
Confidence 00000 000 000 012323233456899999999999752 3456
Q ss_pred HHHHHHHH----hCCCC--EEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 724 LQYARALR----EKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 724 ~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
..+++.++ ..|++ ++++++|+++|.+. .....+.+||..
T Consensus 242 ~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 242 RHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhh
Confidence 67777776 66776 99999999999863 456677777754
No 100
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.80 E-value=3.1e-18 Score=170.71 Aligned_cols=195 Identities=17% Similarity=0.146 Sum_probs=137.6
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC-----CcEEEEECCCCCC------CCChhhhhc----CCCCccccch
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-----GYSLLIVNYRGSL------GFGEEALQS----LPGKVGSQDV 597 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~-----G~~Vv~~d~rG~~------~~g~~~~~~----~~~~~~~~~~ 597 (771)
..++.|+||++||.+.+ ...|...+..|+.+ ||.|++++.++.. +.+..|... .........+
T Consensus 19 ~~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 96 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESI 96 (239)
T ss_dssp SSCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHH
T ss_pred CCCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhH
Confidence 34578999999997654 33566677777765 6999999986421 111111110 0001111234
Q ss_pred hhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004141 598 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 598 ~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
+++.+.+..+++. ..++.++++|+||||||++++.++.++|+.++++|+.+|.......
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------ 158 (239)
T 3u0v_A 97 DVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------ 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH------------------
Confidence 4444444444432 3468899999999999999999999999999999999987532110
Q ss_pred CCccCCCCCChhhHHHHhhcCcccccCCCCCc-EEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC
Q 004141 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 753 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 753 (771)
..... ......+| +|++||++|..+|+++++.+++.+++.+.+++++++++++|.+.
T Consensus 159 ------------~~~~~-------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--- 216 (239)
T 3u0v_A 159 ------------VYQAL-------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS--- 216 (239)
T ss_dssp ------------HHHHH-------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---
T ss_pred ------------HHHHH-------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC---
Confidence 00000 01233456 99999999999999999999999999999999999999999886
Q ss_pred ChHHHHHHHHHHHHHhhC
Q 004141 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~fl~~~L~ 771 (771)
.+....+.+||+++|.
T Consensus 217 --~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 217 --KTELDILKLWILTKLP 232 (239)
T ss_dssp --HHHHHHHHHHHHHHCC
T ss_pred --HHHHHHHHHHHHHhCC
Confidence 4678899999998873
No 101
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.79 E-value=6.8e-19 Score=190.16 Aligned_cols=249 Identities=19% Similarity=0.212 Sum_probs=154.2
Q ss_pred ccccCCCceEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHH----HCCc---EEEEECCCCCCCCC
Q 004141 512 NLTKGAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS----SVGY---SLLIVNYRGSLGFG 581 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~---~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la----~~G~---~Vv~~d~rG~~~~g 581 (771)
++...+|..+++..+.|.+ ..+.++.|+||++||.+.. ...|...+..|+ ..|| .|+++|+|| +|
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~G 98 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---HG 98 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---SH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---CC
Confidence 4557789999999998864 1123456899999997765 345667777787 4589 999999999 67
Q ss_pred hhhhhcCCCCccccc----hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh
Q 004141 582 EEALQSLPGKVGSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 582 ~~~~~~~~~~~~~~~----~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~ 657 (771)
.+............. ++|+.+.++.+.....+++.+++|+||||||.+++.++.++|++++++|+.+|........
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 665422110011122 3344444443321111344569999999999999999999999999999999876531100
Q ss_pred c--CCCCCc----c--hhhhhccCCC-------------C--ccCCCCCChhhHHHHhh---------------------
Q 004141 658 G--TTDIPD----W--CYVESYGSKG-------------K--DSFTESPSVEDLTRFHS--------------------- 693 (771)
Q Consensus 658 ~--~~~~~~----~--~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~--------------------- 693 (771)
. ....+. + .+...+.... . ..+...........+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 0 000000 0 0000000000 0 00000001111111100
Q ss_pred ---------------cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHH
Q 004141 694 ---------------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFES 758 (771)
Q Consensus 694 ---------------~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~ 758 (771)
......+.++++|+|+++|++|.++|++.++.+++.+. .+++++++++||.+... ...++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~e-~p~~~ 333 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNVE-APDLV 333 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHHH-SHHHH
T ss_pred chhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchhc-CHHHH
Confidence 01123567889999999999999999998888777664 47999999999976543 45578
Q ss_pred HHHHHHHHHHhh
Q 004141 759 FLNIGLWFKKYC 770 (771)
Q Consensus 759 ~~~i~~fl~~~L 770 (771)
.+.+.+||++++
T Consensus 334 ~~~i~~fl~~~~ 345 (398)
T 2y6u_A 334 IERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 889999998875
No 102
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.79 E-value=4.6e-19 Score=189.68 Aligned_cols=251 Identities=15% Similarity=0.159 Sum_probs=152.8
Q ss_pred cccCCCceEEEEEEecCCCC--CCCCCcEEEEEcCCCCCCCCC----cchHHHHHHHHCCcEEEEECCCCCCCCChhhhh
Q 004141 513 LTKGAQKPFEAIFVSSSHKK--DCSCDPLIVVLHGGPHSVSLS----SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ 586 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~--~~~~~p~vv~~HGg~~~~~~~----~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~ 586 (771)
+...+|..+.++.+.|.... ..++.|+||++||.+.+.... .+...+..|+++||.|+++|+||.+........
T Consensus 32 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~ 111 (377)
T 1k8q_A 32 VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYY 111 (377)
T ss_dssp EECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSS
T ss_pred eEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCC
Confidence 34567889998888765211 113679999999976653211 122345588999999999999994433221000
Q ss_pred -cCCC---Cccccc-hh-hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC---ceeEEEecCCccchhhhh
Q 004141 587 -SLPG---KVGSQD-VN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLALMV 657 (771)
Q Consensus 587 -~~~~---~~~~~~-~~-D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~---~~~~~v~~~p~~~~~~~~ 657 (771)
.... .+...+ .+ |+.++++++.+. .+.++++|+||||||.+++.++.++|+ +++++|+.+|........
T Consensus 112 ~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~ 189 (377)
T 1k8q_A 112 SPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTE 189 (377)
T ss_dssp CTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCC
T ss_pred CCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccch
Confidence 0000 111111 34 777888888776 245789999999999999999999998 899999999875422100
Q ss_pred ------------------cCCC-CCcchhhh----hc------------------cC-------CCCcc-CCCCCCh---
Q 004141 658 ------------------GTTD-IPDWCYVE----SY------------------GS-------KGKDS-FTESPSV--- 685 (771)
Q Consensus 658 ------------------~~~~-~~~~~~~~----~~------------------~~-------~~~~~-~~~~~~~--- 685 (771)
+... .+...... .+ +. ..... +...+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (377)
T 1k8q_A 190 TLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSV 269 (377)
T ss_dssp SGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEH
T ss_pred hHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCCccH
Confidence 0000 00000000 00 00 00000 0000000
Q ss_pred h------------------------hHHHHhhcC-cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE-E
Q 004141 686 E------------------------DLTRFHSKS-PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK-V 739 (771)
Q Consensus 686 ~------------------------~~~~~~~~s-p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~-~ 739 (771)
. ....+.... +...+.++++|+|+++|++|.++|++.++.+++.+.. .+ +
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~ 345 (377)
T 1k8q_A 270 QNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN----LIYH 345 (377)
T ss_dssp HHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT----EEEE
T ss_pred HHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC----cccE
Confidence 0 111111111 2334778899999999999999999998888777654 44 8
Q ss_pred EEeCCCCccCCC--CCChHHHHHHHHHHHHHh
Q 004141 740 IVFPNDVHGIER--PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 740 ~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~ 769 (771)
++++++||.... .+...+++..|.+||+++
T Consensus 346 ~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 346 RKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred EecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 899999998653 455667889999999864
No 103
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.79 E-value=7.5e-19 Score=176.73 Aligned_cols=185 Identities=17% Similarity=0.116 Sum_probs=135.1
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEE--CCCCCCCCChhhh-hcCCCC--ccccchhhHHHHHHHHHH
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL-QSLPGK--VGSQDVNDVLTAIDHVID 609 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~--d~rG~~~~g~~~~-~~~~~~--~~~~~~~D~~~~i~~l~~ 609 (771)
++.|+||++||++.. ...|...+..|++ +|.|+++ |++|.++++.... ...... ......+|+.++++++.+
T Consensus 60 ~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 567999999997754 3356667777765 5999999 6777443211000 000000 011225677777777766
Q ss_pred cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHH
Q 004141 610 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 689 (771)
Q Consensus 610 ~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (771)
+. +.++++|+|||+||++++.++.++|++++++|+.+|......
T Consensus 137 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 137 HY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------
T ss_pred cc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------
Confidence 53 678999999999999999999999999999999998753210
Q ss_pred HHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 690 RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 690 ~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
......+++|+|+++|++|..+|++.++++++.+++.+.++++ .+++++|.+. .+..+.+.+||+++
T Consensus 181 -------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 181 -------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAY 247 (251)
T ss_dssp -------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGG
T ss_pred -------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHh
Confidence 0112345789999999999999999999999999987777776 6667899874 45678999999988
Q ss_pred hC
Q 004141 770 CK 771 (771)
Q Consensus 770 L~ 771 (771)
|+
T Consensus 248 l~ 249 (251)
T 2r8b_A 248 GG 249 (251)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 104
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.79 E-value=1.6e-18 Score=179.06 Aligned_cols=221 Identities=11% Similarity=0.114 Sum_probs=136.9
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.+++++.+.|.+. ..+..|+||++||.+.+ ...|...+..|+++||.|+++|+||.. |.+... ...+.
T Consensus 13 ~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~--~~~~~~~~~~L~~~G~~Vi~~D~rGh~--G~S~~~--~~~~~ 85 (305)
T 1tht_A 13 RVNNGQELHVWETPPKEN-VPFKNNTILIASGFARR--MDHFAGLAEYLSTNGFHVFRYDSLHHV--GLSSGS--IDEFT 85 (305)
T ss_dssp EETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGG--GGGGHHHHHHHHTTTCCEEEECCCBCC------------CCC
T ss_pred EcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccC--chHHHHHHHHHHHCCCEEEEeeCCCCC--CCCCCc--cccee
Confidence 344688899988877531 12356899999997654 346888999999999999999999941 443211 11121
Q ss_pred c-cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchh--hhh
Q 004141 594 S-QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VES 670 (771)
Q Consensus 594 ~-~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~--~~~ 670 (771)
. ...+|+.++++++.+. +.++++|+||||||.+++.++.+ | +++++|+.++..+............+.. ...
T Consensus 86 ~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDE 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGG
T ss_pred hHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhh
Confidence 1 2256788888888643 34789999999999999999988 6 7899998887654321100000000000 000
Q ss_pred ccCCCCccCCCCC-ChhhH-HHHhhc------CcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004141 671 YGSKGKDSFTESP-SVEDL-TRFHSK------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 671 ~~~~~~~~~~~~~-~~~~~-~~~~~~------sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
... ... +.... ..... ...... +....+.++++|+|+++|++|..+|++.++.+++.+.. .+++++++
T Consensus 161 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~--~~~~l~~i 236 (305)
T 1tht_A 161 LPN-DLD-FEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRT--GHCKLYSL 236 (305)
T ss_dssp CCS-EEE-ETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTT--CCEEEEEE
T ss_pred Ccc-ccc-ccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCC--CCcEEEEe
Confidence 000 000 00000 00000 011111 12345778999999999999999999988887765532 24899999
Q ss_pred CCCCccCC
Q 004141 743 PNDVHGIE 750 (771)
Q Consensus 743 ~~~~H~~~ 750 (771)
+++||.+.
T Consensus 237 ~~agH~~~ 244 (305)
T 1tht_A 237 LGSSHDLG 244 (305)
T ss_dssp TTCCSCTT
T ss_pred CCCCCchh
Confidence 99999875
No 105
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.79 E-value=8.6e-18 Score=171.24 Aligned_cols=229 Identities=14% Similarity=0.130 Sum_probs=143.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cc-hHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~-~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+|.++ .+|.|.+ ++.|+||++|||++..... .+ ......+++.||.|+++|||+.+++ ...
T Consensus 13 ~~~~~--~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p 75 (274)
T 2qru_A 13 NGATV--TIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-----------KID 75 (274)
T ss_dssp TSCEE--EEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHH
T ss_pred CCeeE--EEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCc
Confidence 35555 5777752 5679999999998765433 33 3456678888999999999986543 122
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHh---hCCCceeEEEecCCccchhhhhcCC--CCCc--chh
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTT--DIPD--WCY 667 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~p~~~~~~~~~~~--~~~~--~~~ 667 (771)
..++|+.++++|+.++.. ++++|+|+|+|+||.+|+.++. ..+..++++++.+|..+........ ..+. ...
T Consensus 76 ~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 2qru_A 76 HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKE 154 (274)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGG
T ss_pred HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHH
Confidence 348999999999998742 2789999999999999999987 3567888999888877622110000 0000 000
Q ss_pred hhhc-cCCC-CccCCCCCChh---------hHHHHhhc--------Ccc--cccCCCCCcEEEEeeCCCCccCcHHHHHH
Q 004141 668 VESY-GSKG-KDSFTESPSVE---------DLTRFHSK--------SPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQY 726 (771)
Q Consensus 668 ~~~~-~~~~-~~~~~~~~~~~---------~~~~~~~~--------sp~--~~~~~i~~P~lii~G~~D~~vp~~~~~~~ 726 (771)
...+ .... ...... .... ....+... .+. ..+.++ +|+||++|+.|+.++..+++++
T Consensus 155 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l 232 (274)
T 2qru_A 155 IAAIDQTKPVWDDPFL-SRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKI 232 (274)
T ss_dssp GTTSCCSSCCSCCTTC-TTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHH
T ss_pred HhhhcccCCCCCCccc-cchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHH
Confidence 0000 0000 000000 0000 00000000 001 123455 8999999999999988877776
Q ss_pred HHHHHhCCCCEEEEEeCCCCccCCCCC---ChHHHHHHHHHHHHHh
Q 004141 727 ARALREKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKY 769 (771)
Q Consensus 727 ~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~fl~~~ 769 (771)
.+++ ++++++++++++|++.... ...++++.+.+||+++
T Consensus 233 ~~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 233 GRTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HHhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 6655 4579999999999975321 1235678889998753
No 106
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.78 E-value=3.1e-19 Score=173.99 Aligned_cols=192 Identities=15% Similarity=0.214 Sum_probs=138.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH--HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+|.+++++.+.|. ..++.|+||++||++.. ...|.. .+..|+++||.|+++|+|| +|.+.........
T Consensus 13 ~~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~ 84 (210)
T 1imj_A 13 QVQGQALFFREALPG---SGQARFSVLLLHGIRFS--SETWQNLGTLHRLAQAGYRAVAIDLPG---LGHSKEAAAPAPI 84 (210)
T ss_dssp EETTEEECEEEEECS---SSCCSCEEEECCCTTCC--HHHHHHHTHHHHHHHTTCEEEEECCTT---SGGGTTSCCSSCT
T ss_pred eeCCeEEEEEEeCCC---CCCCCceEEEECCCCCc--cceeecchhHHHHHHCCCeEEEecCCC---CCCCCCCCCcchh
Confidence 346889999999886 34567999999997655 234555 4788999999999999999 5554332211111
Q ss_pred cccch--hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004141 593 GSQDV--NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 593 ~~~~~--~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.... +++...++.+ +.++++++|||+||.+++.++.++|++++++|+.+|.....
T Consensus 85 -~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~---------------- 141 (210)
T 1imj_A 85 -GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------- 141 (210)
T ss_dssp -TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------
T ss_pred -hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc----------------
Confidence 1112 4555544443 34689999999999999999999999999999998874310
Q ss_pred ccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004141 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
.....+.++++|+|+++|++|. ++.+..+.+ +.+ .+.++.++++++|.+.
T Consensus 142 ------------------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~~~~H~~~ 191 (210)
T 1imj_A 142 ------------------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMKGAGHPCY 191 (210)
T ss_dssp ------------------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEETTCCTTHH
T ss_pred ------------------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEecCCCcchh
Confidence 0112235678999999999999 988776665 443 3589999999999854
Q ss_pred CCCChHHHHHHHHHHHHH
Q 004141 751 RPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 751 ~~~~~~~~~~~i~~fl~~ 768 (771)
.. ....+.+.+.+||++
T Consensus 192 ~~-~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 192 LD-KPEEWHTGLLDFLQG 208 (210)
T ss_dssp HH-CHHHHHHHHHHHHHT
T ss_pred hc-CHHHHHHHHHHHHHh
Confidence 32 344677888888875
No 107
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.78 E-value=1.9e-18 Score=174.57 Aligned_cols=184 Identities=15% Similarity=0.060 Sum_probs=136.8
Q ss_pred EEEEecCCCCC-CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHH
Q 004141 523 AIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 601 (771)
Q Consensus 523 ~~~~~P~~~~~-~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~ 601 (771)
+.+|.|..... +++.|+||++||++.. ...|...+..|+++||.|+++|+|++. ...|+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~~ 94 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGREML 94 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHHHHH
Confidence 67888874211 2378999999997764 456778889999999999999999631 134555
Q ss_pred HHHHHHHHc---------CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004141 602 TAIDHVIDM---------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 602 ~~i~~l~~~---------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
.+++++.+. ..++.++++|+||||||.+++.++ .+++++++++.+|....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------- 153 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------- 153 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------
Confidence 566665542 235678999999999999999887 35689999987764310
Q ss_pred CCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004141 673 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
.+ .....+.++++|+|+++|++|..+|++. ...+++. .+.+++++++++++|.+..
T Consensus 154 ---------~~-----------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~ 210 (258)
T 2fx5_A 154 ---------LG-----------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV 210 (258)
T ss_dssp ---------TT-----------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST
T ss_pred ---------cc-----------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc
Confidence 00 0012456788999999999999999886 7777665 3467999999999998775
Q ss_pred CCChHHHHHHHHHHHHHhh
Q 004141 752 PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 752 ~~~~~~~~~~i~~fl~~~L 770 (771)
... ..+...+.+||+++|
T Consensus 211 ~~~-~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 211 GSG-GAYRGPSTAWFRFQL 228 (258)
T ss_dssp TTC-GGGHHHHHHHHHHHH
T ss_pred chH-HHHHHHHHHHHHHHh
Confidence 443 377889999999776
No 108
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.78 E-value=4.7e-18 Score=179.28 Aligned_cols=254 Identities=14% Similarity=0.051 Sum_probs=153.4
Q ss_pred cccccCCC--ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCc-----chHHHHHHH-HCCcEEEEECCCCCCCCC
Q 004141 511 ANLTKGAQ--KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSS-----YSKSLAFLS-SVGYSLLIVNYRGSLGFG 581 (771)
Q Consensus 511 ~~~~~~~g--~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~-----~~~~~~~la-~~G~~Vv~~d~rG~~~~g 581 (771)
+.+.+.+| ..+.++++.|.+. .++.|+|++.||...... ... ....+..|+ ++||+|+++||||.++++
T Consensus 48 Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~ 125 (377)
T 4ezi_A 48 YKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNE 125 (377)
T ss_dssp EEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCC
T ss_pred EEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCC
Confidence 34445445 5588999999853 467899999999764211 111 123455677 999999999999966554
Q ss_pred hhhhhcCCCCccccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHhhCCC-----ceeEEEecCCccchhh
Q 004141 582 EEALQSLPGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLAL 655 (771)
Q Consensus 582 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~p~~~~~~ 655 (771)
..............++.|...++..+.+. +..+.++|+++|||+||++++.++..+|+ .+++++..++..++..
T Consensus 126 ~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~ 205 (377)
T 4ezi_A 126 LTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEE 205 (377)
T ss_dssp CSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHH
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHH
Confidence 31100000000112233444444444443 32356899999999999999999886543 5889999998887653
Q ss_pred hhcCCC---C-C--cc----------------hhhhhccCCCC-------c----------cCC----CCCChhhHHHHh
Q 004141 656 MVGTTD---I-P--DW----------------CYVESYGSKGK-------D----------SFT----ESPSVEDLTRFH 692 (771)
Q Consensus 656 ~~~~~~---~-~--~~----------------~~~~~~~~~~~-------~----------~~~----~~~~~~~~~~~~ 692 (771)
.....+ . . .+ .....+..... . .+. ............
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
T 4ezi_A 206 TMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGII 285 (377)
T ss_dssp HHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHH
T ss_pred HHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcc
Confidence 221100 0 0 00 00000000000 0 000 000000000000
Q ss_pred -hcCc-cc--------ccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--CCccCCCCCChHHHHH
Q 004141 693 -SKSP-IS--------HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN--DVHGIERPQSDFESFL 760 (771)
Q Consensus 693 -~~sp-~~--------~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~~~~~~~~~~~~ 760 (771)
...| +. .-..+++|+|++||++|.+||+++++++++++++.|. ++++.+++ .+|... ....+.
T Consensus 286 ~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~----~~~~~~ 360 (377)
T 4ezi_A 286 SKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA----HPFVLK 360 (377)
T ss_dssp TTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT----HHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh----HHHHHH
Confidence 0122 10 1125679999999999999999999999999999999 99999999 889754 346788
Q ss_pred HHHHHHHHhhC
Q 004141 761 NIGLWFKKYCK 771 (771)
Q Consensus 761 ~i~~fl~~~L~ 771 (771)
.+++||+++++
T Consensus 361 ~~~~wl~~~~~ 371 (377)
T 4ezi_A 361 EQVDFFKQFER 371 (377)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhc
Confidence 99999998864
No 109
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.78 E-value=3.6e-18 Score=178.87 Aligned_cols=199 Identities=13% Similarity=0.149 Sum_probs=143.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch-------HHHHHHHHCCcEEEEECCCCCCCCChhhhhcC-----
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL----- 588 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~-------~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~----- 588 (771)
+...++.|.+ .+.|+||++||++... ..|. ..+..|+++||.|+++|+||.+..+.......
T Consensus 50 ~~~~~~~p~~----~~~~~vvl~HG~g~~~--~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 50 MYVRYQIPQR----AKRYPITLIHGCCLTG--MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp EEEEEEEETT----CCSSCEEEECCTTCCG--GGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred EEEEEEccCC----CCCccEEEEeCCCCCC--CccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccc
Confidence 5555667752 2346799999987543 3454 37888999999999999999544332211000
Q ss_pred -----------------------CC-Ccc---------ccchhh------------------HHHHHHHHHHcCCCCCCe
Q 004141 589 -----------------------PG-KVG---------SQDVND------------------VLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 589 -----------------------~~-~~~---------~~~~~D------------------~~~~i~~l~~~~~~d~~r 617 (771)
.+ .+. ...+++ +.+++..++++. ++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~~ 199 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----DG 199 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----TS
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----CC
Confidence 00 000 000122 556666666552 37
Q ss_pred EEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcc
Q 004141 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI 697 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 697 (771)
++|+|||+||.+++.++.++|++++++|+.+|... ..+.
T Consensus 200 ~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------------------~~~~ 238 (328)
T 1qlw_A 200 TVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------------------PKPE 238 (328)
T ss_dssp EEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------------------CCGG
T ss_pred ceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------------------CCHH
Confidence 99999999999999999999999999999887530 0011
Q ss_pred cccCCCCCcEEEEeeCCCCccCc-----HHHHHHHHHHHhCCCCEEEEEeCCCC-----ccCCCCCChHHHHHHHHHHHH
Q 004141 698 SHISKVKTPTIFLLGAQDLRVPV-----SNGLQYARALREKGVETKVIVFPNDV-----HGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 698 ~~~~~i~~P~lii~G~~D~~vp~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~fl~ 767 (771)
.....+++|+|+++|++|..+|+ +.++.+++.++..|.++++++++++| |.+....+..++.+.+.+||+
T Consensus 239 ~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~ 318 (328)
T 1qlw_A 239 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIG 318 (328)
T ss_dssp GCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHH
T ss_pred HHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHH
Confidence 11223568999999999999997 99999999999988899999999665 988766656789999999999
Q ss_pred Hhh
Q 004141 768 KYC 770 (771)
Q Consensus 768 ~~L 770 (771)
+++
T Consensus 319 ~~~ 321 (328)
T 1qlw_A 319 RNT 321 (328)
T ss_dssp HTC
T ss_pred hcc
Confidence 875
No 110
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=1.8e-18 Score=196.93 Aligned_cols=233 Identities=16% Similarity=0.105 Sum_probs=161.2
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+...++||||++|||++..+ +..++|.+ ++++.++++... ..+ ..+.|||| +|+|.+....
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~-g~~~lw~~-~~g~~~~lt~~~~~~~----------~~~~~spd--~~l~~~~~~~--- 85 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSE-GSVNAYLY-DGGETVKLNREPINSV----------LDPHYGVG--RVILVRDVSK--- 85 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEET-TEEEEEEE-ETTEEEECCSSCCSEE----------CEECTTCS--EEEEEEECST---
T ss_pred chheeecCCCCCeEEEEEccC-CceeEEEE-cCCCcEeeeccccccc----------ccccCCCC--eEEEEeccCC---
Confidence 377889999999999998754 55566765 566666666543 122 58999999 6888765311
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc--cCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+.....||.+++ +++.. .+ +... .....+|||||+.
T Consensus 86 -----------------------------------g~~~~~l~~~~~~~~g~~~-~l--~~~~-~~~~~~~s~dg~~--- 123 (582)
T 3o4h_A 86 -----------------------------------GAEQHALFKVNTSRPGEEQ-RL--EAVK-PMRILSGVDTGEA--- 123 (582)
T ss_dssp -----------------------------------TSCCEEEEEEETTSTTCCE-EC--TTSC-SBEEEEEEECSSC---
T ss_pred -----------------------------------CCcceEEEEEeccCCCccc-cc--cCCC-CceeeeeCCCCCe---
Confidence 012357999998 66555 55 2222 2346799999999
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
++|++...+ .++++|+ ++++.++++.... .+++|||||++|+|.+.
T Consensus 124 -~~~~s~~~~--------------~~~l~d~-----------------~~g~~~~l~~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 124 -VVFTGATED--------------RVALYAL-----------------DGGGLRELARLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp -EEEEEECSS--------------CEEEEEE-----------------ETTEEEEEEEESS--CEEEEEEETTEEEEEEE
T ss_pred -EEEEecCCC--------------CceEEEc-----------------cCCcEEEeecCCC--ceEEECCCCCEEEEEEE
Confidence 999873222 3446687 7778888876544 78999999999999987
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+. .....||++|+.+++.++++.... ....++|||||+.|+ .+..++...||
T Consensus 170 ~~-------~~~~~i~~~d~~~g~~~~l~~~~~--------------------~~~~~~~SpDG~~l~-~~~~~~~~~i~ 221 (582)
T 3o4h_A 170 FG-------GGRVSLFTSNLSSGGLRVFDSGEG--------------------SFSSASISPGMKVTA-GLETAREARLV 221 (582)
T ss_dssp EE-------TTEEEEEEEETTTCCCEEECCSSC--------------------EEEEEEECTTSCEEE-EEECSSCEEEE
T ss_pred cC-------CCCeEEEEEcCCCCCceEeecCCC--------------------ccccceECCCCCEEE-EccCCCeeEEE
Confidence 74 123569999999888765543321 124678999999887 55566667899
Q ss_pred EEECCCCcEEEecCCCCCceeeE--------EeecCCEEEEEEeCC
Q 004141 417 SVNVSSGELLRITPAESNFSWSL--------LTLDGDNIIAVSSSP 454 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~--------~s~dg~~l~~~~~~~ 454 (771)
++|+++++.+.++........+. |+||| .++++.+..
T Consensus 222 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~ 266 (582)
T 3o4h_A 222 TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE 266 (582)
T ss_dssp EECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET
T ss_pred EEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC
Confidence 99999999883333333333345 99999 666665443
No 111
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.77 E-value=1.9e-18 Score=175.83 Aligned_cols=230 Identities=17% Similarity=0.201 Sum_probs=135.7
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.++++..+- ..|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+... ..
T Consensus 4 ~~~~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~ 65 (271)
T 3ia2_A 4 VAKDGTQIYFKDWG--------SGKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRG---FGRSDQP-----WT 65 (271)
T ss_dssp ECTTSCEEEEEEES--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTSCCC-----SS
T ss_pred EcCCCCEEEEEccC--------CCCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCC---CccCCCC-----CC
Confidence 34567788655542 23568999997665 4568888889999999999999999 5544211 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhh-CCCceeEEEecCCccchhhhhcC--CCCCc-c----
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGT--TDIPD-W---- 665 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~p~~~~~~~~~~--~~~~~-~---- 665 (771)
....+++.+.+..+++. ++.+++.|+||||||.+++.+++. .|++++++|+.++.......... ...+. .
T Consensus 66 ~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (271)
T 3ia2_A 66 GNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARF 143 (271)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHH
Confidence 22344444444444433 245789999999999877666555 48999999988764321100000 00000 0
Q ss_pred ---------hhhhhccCCCCccC-CCCCChhh-------------------HHHHhhcCcccccCCCCCcEEEEeeCCCC
Q 004141 666 ---------CYVESYGSKGKDSF-TESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 666 ---------~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~lii~G~~D~ 716 (771)
.+...+........ ........ ...+...+....+.++++|+|+++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 144 KTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCC
Confidence 00000000000000 00000000 00111122233467899999999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
++|++.+.+++..+. ...++.+++++||.+.. +...++.+.+.+||+
T Consensus 224 ~~p~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 224 IVPFETTGKVAAELI---KGAELKVYKDAPHGFAV-THAQQLNEDLLAFLK 270 (271)
T ss_dssp SSCGGGTHHHHHHHS---TTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHhC---CCceEEEEcCCCCcccc-cCHHHHHHHHHHHhh
Confidence 999987555544432 23789999999998763 345578888888885
No 112
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.77 E-value=1.3e-17 Score=168.40 Aligned_cols=222 Identities=14% Similarity=0.152 Sum_probs=142.7
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+...+|.+++..... +.|+||++||++.+ ...|...+..|+ .||.|+++|+|| +|.+...
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G---~G~S~~~------ 66 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALST--RAGGAPLAERLA-PHFTVICYDRRG---RGDSGDT------ 66 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCC--GGGGHHHHHHHT-TTSEEEEECCTT---STTCCCC------
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcC--hHHHHHHHHHHh-cCcEEEEEecCC---CcCCCCC------
Confidence 345567888765543 14789999997765 346777888887 899999999999 4444221
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcch--hhhh
Q 004141 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YVES 670 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~--~~~~ 670 (771)
.....+++.+.+..+++. ++ +++.|+|||+||.+++.++.++| +++++|+.+|........... ...+. ....
T Consensus 67 ~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~ 141 (262)
T 3r0v_A 67 PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPV-PPDYQTRLDAL 141 (262)
T ss_dssp SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCC-CTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchh-hhHHHHHHHHH
Confidence 123466666666666655 24 78999999999999999999999 999999999865432111000 00000 0000
Q ss_pred ccC--------CCCccCCCCCChhhHHHHh------------------------hcCcccccCCCCCcEEEEeeCCCCcc
Q 004141 671 YGS--------KGKDSFTESPSVEDLTRFH------------------------SKSPISHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 671 ~~~--------~~~~~~~~~~~~~~~~~~~------------------------~~sp~~~~~~i~~P~lii~G~~D~~v 718 (771)
... .........+ .+....+. ...+...+.++++|+|+++|++|..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 220 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP-PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAW 220 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC-HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHH
T ss_pred hhccchhhHHHHHhhcccCCC-HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCC
Confidence 000 0000000000 01101110 11234557788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
|++.+..+.+.+.. +++++++++||. +...++.+.+.+||++
T Consensus 221 ~~~~~~~~~~~~~~----~~~~~~~~~gH~----~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 221 IRHTAQELADTIPN----ARYVTLENQTHT----VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHSTT----EEEEECCCSSSS----CCHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHhCCC----CeEEEecCCCcc----cCHHHHHHHHHHHHhC
Confidence 99888888877643 799999999993 2456788888888853
No 113
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=1.1e-17 Score=203.38 Aligned_cols=326 Identities=9% Similarity=0.029 Sum_probs=200.5
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCC--CCC
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE--NES 123 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~--~~~ 123 (771)
.|..| |++|+|... ..||++++ .+++.++|+... ..+..++|||||++|||.+... ++.
T Consensus 19 ~~~~S--~~~iaf~~~----------~~l~~~~~--~gg~~~~lt~~~-----~~v~~~~~SPDG~~la~~s~~~~~~~~ 79 (1045)
T 1k32_A 19 NPDIH--GDRIIFVCC----------DDLWEHDL--KSGSTRKIVSNL-----GVINNARFFPDGRKIAIRVMRGSSLNT 79 (1045)
T ss_dssp EEEEE--TTEEEEEET----------TEEEEEET--TTCCEEEEECSS-----SEEEEEEECTTSSEEEEEEEESTTCCE
T ss_pred CcEEe--CCEEEEEEC----------CcEEEEEC--CCCcEEEeeeCC-----CcccCeEECCCCCEEEEEEeeccCCCC
Confidence 44445 458999863 37898876 445677887654 5688999999999999998762 244
Q ss_pred CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC---CCc--cCCCCC-----CCCCC
Q 004141 124 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK---PTF--SLGSTK-----GGSSD 192 (771)
Q Consensus 124 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~---~~~--~~~~~~-----~~~~~ 192 (771)
.++++++ .++..++++.......+.. .....++|||||+ |+|.+....... ..| ...... .....
T Consensus 80 ~~i~~~d~~~g~~~~lt~~~~~~~~~~---~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~ 155 (1045)
T 1k32_A 80 ADLYFYNGENGEIKRITYFSGKSTGRR---MFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 155 (1045)
T ss_dssp EEEEEEETTTTEEEECCCCCEEEETTE---ECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCS
T ss_pred CeEEEEECCCCCeEEcccCCCcccccc---cccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcc
Confidence 5777777 5555555443322210000 0014789999998 777765321100 000 000000 00000
Q ss_pred ---------------ccCCCC-----------------------------------------------------------
Q 004141 193 ---------------KDCNSW----------------------------------------------------------- 198 (771)
Q Consensus 193 ---------------~~~~~~----------------------------------------------------------- 198 (771)
.....|
T Consensus 156 ~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g 235 (1045)
T 1k32_A 156 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDG 235 (1045)
T ss_dssp EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTS
T ss_pred eeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCC
Confidence 000000
Q ss_pred -----------CCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC---------CCCccceEEEe-cCCCCCccE
Q 004141 199 -----------KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---------KSLSVGQVVWA-PLNEGLHQY 257 (771)
Q Consensus 199 -----------~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~---------~~~~~~~~~ws-pDg~~~~~~ 257 (771)
.....|++|. ..++......|++||++++++..+.+.. ....+..++|| |||+.
T Consensus 236 ~~~~~l~~~~~~~~~~~SpDG-~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~---- 310 (1045)
T 1k32_A 236 KDLRKHTSFTDYYPRHLNTDG-RRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL---- 310 (1045)
T ss_dssp CSCEECCCCCSSCEEEEEESS-SCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC----
T ss_pred CcceEecCCCCcceeeEcCCC-CEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCE----
Confidence 0011233332 1121223455666666555544442100 01146789999 99999
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc-cccceeecCCCCEEEEEec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-~~~~p~~SpDG~~l~f~~~ 336 (771)
|+|.+ ...|+.+++ .+++.++++.+.. .+..++|| ||+.|+|.+.
T Consensus 311 la~~~----------------~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 311 IAFVS----------------RGQAFIQDV-----------------SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp EEEEE----------------TTEEEEECT-----------------TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET
T ss_pred EEEEE----------------cCEEEEEcC-----------------CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC
Confidence 99986 127999998 7777778887777 78899999 9999999886
Q ss_pred CCCCCCCCccccccce-eeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 337 KSSVDSGAHSATDSLH-RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
+ .+|| ++|+.++..+.++ ... ..+..++|||||+.|++... ...|
T Consensus 357 ~-----------~~l~~~~d~~~~~~~~l~-~~~-------------------~~~~~~~~SpDG~~la~~~~---~~~v 402 (1045)
T 1k32_A 357 E-----------GDFLGIYDYRTGKAEKFE-ENL-------------------GNVFAMGVDRNGKFAVVAND---RFEI 402 (1045)
T ss_dssp T-----------EEEEEEEETTTCCEEECC-CCC-------------------CSEEEEEECTTSSEEEEEET---TSEE
T ss_pred C-----------CceEEEEECCCCCceEec-CCc-------------------cceeeeEECCCCCEEEEECC---CCeE
Confidence 2 3689 9998876654443 110 12346789999998887654 2378
Q ss_pred EEEECCCCcEEEec-CCCCCceeeEEeecCCEEEEEEeCC------CCCCeEEEEEecc
Q 004141 416 ISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSP------VDVPQVKYGYFVD 467 (771)
Q Consensus 416 ~~~d~~tg~~~~l~-~~~~~~~~~~~s~dg~~l~~~~~~~------~~p~~l~~~~~~~ 467 (771)
+.+|+.+|+.+.+. .....+....|||||++|++..... ..+..+++.++.+
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 89999999998887 3334446688999999998887654 4456788887654
No 114
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=4.6e-18 Score=196.77 Aligned_cols=272 Identities=14% Similarity=0.114 Sum_probs=176.1
Q ss_pred ccceEEEeCCCCCeEEEEecC--CCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeec--CCCCe-EEEEecC
Q 004141 99 TGASAVVPSPSGSKLLVVRNP--ENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN--SDETL-IAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wS--pDg~~-la~~~~~ 173 (771)
..+..|++||+ +++|++.+ .++...+|.+..++..++++.....+...+...+ -..+.|| |||++ |+|.+..
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYS-GFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTC-CCCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccC-CccceeeeecCCCeEEEEEECC
Confidence 45788999965 78888763 3344456655445555555543322211111111 0144565 99999 9997432
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc--C-CceeeccCCC---CCCccceEEE
Q 004141 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--S-GEVQAVKGIP---KSLSVGQVVW 247 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~-~~~~~l~~~~---~~~~~~~~~w 247 (771)
...||+++++ + ++.+.++..+ .......++|
T Consensus 101 -------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 101 -------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE
T ss_pred -------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE
Confidence 2579999998 5 8888884221 3446778999
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC------CcceecC-CCCcccc
Q 004141 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED------LPVVNLT-ESISSAF 320 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~lt-~~~~~~~ 320 (771)
||||+. |+|++....... ......+||++|+ ++ ++.++|+ .+...+.
T Consensus 138 spDg~~----l~~~~~~~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 138 LPERGE----VWCMAEEFTGEG-----PSDVRRFLAAVPL-----------------DGSAAADRSAVRELSDDAHRFVT 191 (662)
T ss_dssp ETTTTE----EEEEEEEECSSS-----TTCEEEEEEEEET-----------------TSTTTTCGGGSEESSCSCSSEEC
T ss_pred CCCCCE----EEEEEecccCCC-----CCCceeEEEEEEC-----------------CCCccccCCceeEEEecCCCccc
Confidence 999999 999885321000 0012248999998 66 7788888 7777788
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecC-CC---CCCCCccceeeEEecccccCCCCCcccccCCCCCCcc
Q 004141 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TN---GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 396 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~-~~---~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~ 396 (771)
+|+|||||++|+|.+.+.. +......+|+++|+. ++ +.++++... ......+.|
T Consensus 192 ~~~~SpDG~~la~~~~~~~---~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-------------------~~~~~~~~~ 249 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHP---RMPWEGTELKTARVTEDGRFADTRTLLGGP-------------------EEAIAQAEW 249 (662)
T ss_dssp CCEECTTSSEEEEEEECTT---CCTTTCEEEEEEEECTTSCEEEEEEEEEET-------------------TBCEEEEEE
T ss_pred CceECCCCCEEEEEECCCC---CCCCCCcEEEEEEECCCCcccccEEeCCCC-------------------CceEcceEE
Confidence 9999999999999987642 111234679999998 45 222222110 012346789
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCc---------eeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 397 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF---------SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 397 s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~---------~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
||||+ |+|+++.++..+||.+|+++++.++++...... ....++++++ ++++.+. .-.+|+++++.+
T Consensus 250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~d~~~ 325 (662)
T 3azo_A 250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK--GAAVLGILDPES 325 (662)
T ss_dssp CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS--SSCEEEEEETTT
T ss_pred CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc--CccEEEEEECCC
Confidence 99999 888887777779999999999999888654322 2334555655 5566655 556788887654
Q ss_pred c
Q 004141 468 K 468 (771)
Q Consensus 468 ~ 468 (771)
+
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 3
No 115
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=3.7e-17 Score=167.86 Aligned_cols=249 Identities=14% Similarity=0.155 Sum_probs=168.0
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCC
Q 004141 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.....+|||+.|++.. ...++++++... ++..++.... ....+..++|||||++|++.....++..
T Consensus 45 ~~~~~spdg~~l~~~~----------~~~i~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 45 EAPNWSPDGKYLLLNS----------EGLLYRLSLAGD-PSPEKVDTGF---ATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEECTTSSEEEEEE----------TTEEEEEESSSC-CSCEECCCTT---CCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred EeeEECCCCCEEEEEc----------CCeEEEEeCCCC-CCceEecccc---ccccccceEECCCCCEEEEEEeCCCCcc
Confidence 3445688999999863 137888777441 2344333221 1134567899999999999886554667
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004141 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.+|.+. .++....+... ... ..+.|||||++|+|.+...
T Consensus 111 ~l~~~~~~~~~~~~~~~~-~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 150 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKN-LPS----------YWHGWSPDGKSFTYCGIRD----------------------------- 150 (297)
T ss_dssp EEEEEETTCCCCEECCSS-SSE----------EEEEECTTSSEEEEEEEET-----------------------------
T ss_pred eEEEEECCCCceEEeecC-CCc----------cceEECCCCCEEEEEECCC-----------------------------
Confidence 888887 44443333222 112 4789999999999875432
Q ss_pred ccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004141 204 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
+...||.+++.+++.+.+ ......+..+.|+|||+. |++.+... ....||
T Consensus 151 ------------~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~~~------------~~~~i~ 200 (297)
T 2ojh_A 151 ------------QVFDIYSMDIDSGVETRL--THGEGRNDGPDYSPDGRW----IYFNSSRT------------GQMQIW 200 (297)
T ss_dssp ------------TEEEEEEEETTTCCEEEC--CCSSSCEEEEEECTTSSE----EEEEECTT------------SSCEEE
T ss_pred ------------CceEEEEEECCCCcceEc--ccCCCccccceECCCCCE----EEEEecCC------------CCccEE
Confidence 225788888888888888 555556788999999998 88876322 234789
Q ss_pred EEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004141 284 AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.+++ .++....++.....+..+.|||||++|++.+.+.............|+++|+.+++...
T Consensus 201 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 201 RVRV-----------------DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EEET-----------------TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred EECC-----------------CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 9987 66777888877777889999999999999987642100000123679999998876533
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004141 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~ 411 (771)
+.... . ....+..++|+|||+.|++.+...+
T Consensus 264 ~~~~~-------~----------~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 264 LFDLF-------G----------GQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp EEEEE-------E----------STTTSCSCCBCTTSSEEEEEEECCC
T ss_pred eeccC-------C----------CCcccccceECCCCCEEEEEEeccC
Confidence 32110 0 0113567899999999988876543
No 116
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.77 E-value=1.5e-17 Score=177.26 Aligned_cols=247 Identities=13% Similarity=0.160 Sum_probs=152.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----------cchHHHH---HHHHCCcEEEEECCCC--CCCC
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------SYSKSLA---FLSSVGYSLLIVNYRG--SLGF 580 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----------~~~~~~~---~la~~G~~Vv~~d~rG--~~~~ 580 (771)
+|..++...+.+. .....|+||++||.+...... .|...+. .|++.||.|+++|+|| .+..
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s 105 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS 105 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCC
Confidence 4667776666554 223458899999977664310 3444442 3557899999999999 3433
Q ss_pred ChhhhhcC---C--CCccccchhhHHHHHHHHHHcCCCCCCeE-EEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh
Q 004141 581 GEEALQSL---P--GKVGSQDVNDVLTAIDHVIDMGLANPSKV-TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 654 (771)
Q Consensus 581 g~~~~~~~---~--~~~~~~~~~D~~~~i~~l~~~~~~d~~ri-~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~ 654 (771)
+....... . .......++++.+.+..+++. ++.+++ .|+||||||.+++.++.++|++++++|+.+|.....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 183 (366)
T 2pl5_A 106 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHS 183 (366)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCC
T ss_pred CCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCC
Confidence 22110000 0 000123567777777766665 345788 799999999999999999999999999999875431
Q ss_pred hhh---------cCCCCCcc-----------------------------hhhhhccCCCC-----------cc-------
Q 004141 655 LMV---------GTTDIPDW-----------------------------CYVESYGSKGK-----------DS------- 678 (771)
Q Consensus 655 ~~~---------~~~~~~~~-----------------------------~~~~~~~~~~~-----------~~------- 678 (771)
... .....+.| .+...+..... ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (366)
T 2pl5_A 184 AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGE 263 (366)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTC
T ss_pred CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHH
Confidence 100 00000000 00000000000 00
Q ss_pred -CCCCCChhhH----HHHhhcCc------ccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe-CCCC
Q 004141 679 -FTESPSVEDL----TRFHSKSP------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF-PNDV 746 (771)
Q Consensus 679 -~~~~~~~~~~----~~~~~~sp------~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-~~~~ 746 (771)
+......... ..+..... ...+.++++|+|+++|++|.++|++.++.+++.+...+.+++++++ +++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 343 (366)
T 2pl5_A 264 SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG 343 (366)
T ss_dssp CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCC
Confidence 0000011111 11111111 2257789999999999999999999999999999976666899999 8999
Q ss_pred ccCCCCCChHHHHHHHHHHHHHh
Q 004141 747 HGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
|.+.... ..++.+.+.+||+++
T Consensus 344 H~~~~e~-p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 344 HDSFLLK-NPKQIEILKGFLENP 365 (366)
T ss_dssp SGGGGSC-CHHHHHHHHHHHHCC
T ss_pred cchhhcC-hhHHHHHHHHHHccC
Confidence 9877544 358889999999764
No 117
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.77 E-value=1.1e-17 Score=172.92 Aligned_cols=231 Identities=13% Similarity=0.135 Sum_probs=140.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH-HHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS-LAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~-~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|.++++..+-++ ..|.||++||.+.+ ...|... +..|+++||.|+++|+|| +|.+.... + ....
T Consensus 8 ~~g~~l~y~~~G~~------~~~~vvllHG~~~~--~~~w~~~~~~~L~~~G~~vi~~D~rG---~G~S~~~~-~-~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------ADPALLLVMGGNLS--ALGWPDEFARRLADGGLHVIRYDHRD---TGRSTTRD-F-AAHP 74 (298)
T ss_dssp ETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGSCHHHHHHHHTTTCEEEEECCTT---STTSCCCC-T-TTSC
T ss_pred cCCeEEEEEeccCC------CCCeEEEEcCCCCC--ccchHHHHHHHHHhCCCEEEeeCCCC---CCCCCCCC-C-CcCC
Confidence 35777876665432 24689999997765 3456664 488999999999999999 55443100 0 0112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc-ch-hhh------h------cCC
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NL-ALM------V------GTT 660 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~-~~-~~~------~------~~~ 660 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++.. .. ... . ...
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 152 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccc
Confidence 3355555555555554 245689999999999999999999999999999987754 21 000 0 000
Q ss_pred CCC-cc--hhhhhcc-CCC--------C---ccC--CCC-CChhhH-------------------HHHh---hcCcccc-
Q 004141 661 DIP-DW--CYVESYG-SKG--------K---DSF--TES-PSVEDL-------------------TRFH---SKSPISH- 699 (771)
Q Consensus 661 ~~~-~~--~~~~~~~-~~~--------~---~~~--~~~-~~~~~~-------------------~~~~---~~sp~~~- 699 (771)
... .. .+..... ... . ... ... ...+.. ..+. ..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T 1q0r_A 153 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 232 (298)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred cccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccc
Confidence 000 00 0000000 000 0 000 000 000000 0000 0011224
Q ss_pred cCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 700 ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 700 ~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+.++++|+|+++|++|..+|++.++.+.+.+. ..++++++++||.. ..++.+.+.+||.+++
T Consensus 233 l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gHe~-----p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 233 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIPGMGHAL-----PSSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTST----TEEEEEETTCCSSC-----CGGGHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEeCCCccCCHHHHHHHHHhCC----CCEEEEcCCCCCCC-----cHHHHHHHHHHHHHHh
Confidence 67889999999999999999988887776654 37999999999922 2467889999998764
No 118
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.77 E-value=5e-18 Score=170.18 Aligned_cols=217 Identities=17% Similarity=0.235 Sum_probs=134.0
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc-chhhHHHHHHHHHHcCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ-DVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~-~~~D~~~~i~~l~~~~~~d~ 615 (771)
.|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+..... ..... ..+|+.++++++.+.+ .
T Consensus 16 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---hG~s~~~~~--~~~~~~~~~d~~~~~~~l~~~~---~ 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKG---HGVPPEELV--HTGPDDWWQDVMNGYEFLKNKG---Y 85 (247)
T ss_dssp SCEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTT---SSSCHHHHT--TCCHHHHHHHHHHHHHHHHHHT---C
T ss_pred CcEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCC---CCCCHHHhc--CCCHHHHHHHHHHHHHHHHHcC---C
Confidence 3679999997655 3467778888989999999999999 443322111 11111 1355666666665543 3
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccch---hhhhc-CCCCCcchhhhhccCC------CCccCCCCC--
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL---ALMVG-TTDIPDWCYVESYGSK------GKDSFTESP-- 683 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~---~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~-- 683 (771)
+++.|+||||||.+++.++.++| ++++|+.++.... ..... ...... .+....... ....+...+
T Consensus 86 ~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
T 1tqh_A 86 EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAR-EYKKREGKSEEQIEQEMEKFKQTPMK 162 (247)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHH-HHHHHHTCCHHHHHHHHHHHTTSCCT
T ss_pred CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHH-HhhcccccchHHHHhhhhcccCCCHH
Confidence 68999999999999999999988 7777754432210 00000 000000 000000000 000000000
Q ss_pred ChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHH
Q 004141 684 SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 763 (771)
Q Consensus 684 ~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 763 (771)
.......+. .+....+.++++|+|+++|++|..+|++.++.+++.+.. ..+++++++++||.....+....+.+.+.
T Consensus 163 ~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~~~~~~~i~ 239 (247)
T 1tqh_A 163 TLKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVITLDQEKDQLHEDIY 239 (247)
T ss_dssp THHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeeccCccHHHHHHHHH
Confidence 000111110 122345678999999999999999999998888877643 24789999999998766555568889999
Q ss_pred HHHHHh
Q 004141 764 LWFKKY 769 (771)
Q Consensus 764 ~fl~~~ 769 (771)
+||++.
T Consensus 240 ~Fl~~~ 245 (247)
T 1tqh_A 240 AFLESL 245 (247)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999863
No 119
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.76 E-value=1.9e-18 Score=175.63 Aligned_cols=218 Identities=15% Similarity=0.198 Sum_probs=139.9
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+... ......++++.+.+..+++.. +.
T Consensus 14 ~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~l--~~ 81 (268)
T 3v48_A 14 DAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRG---TGNNPDT----LAEDYSIAQMAAELHQALVAA--GI 81 (268)
T ss_dssp TCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTT---BTTBCCC----CCTTCCHHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCC---CCCCCCC----ccccCCHHHHHHHHHHHHHHc--CC
Confidence 46889999997665 4468888888854 79999999999 5554211 111234666666666666652 34
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc-----------CCCCCcchhh-------hhccCCCC-
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TTDIPDWCYV-------ESYGSKGK- 676 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----------~~~~~~~~~~-------~~~~~~~~- 676 (771)
+++.|+||||||.+++.++.++|++++++|+.++......... ......+... ..+.....
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 6899999999999999999999999999999887542110000 0000000000 00000000
Q ss_pred -------ccCCCCCChhh----HHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004141 677 -------DSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 677 -------~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
........... ...+...+....+.++++|+|+++|++|..+|++.++.+.+.+.. .++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~----~~~~~~~~~ 237 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD----SQKMVMPYG 237 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEESSC
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc----CeEEEeCCC
Confidence 00000000000 111122233345778999999999999999999988888877654 789999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHHhh
Q 004141 746 VHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
||.... +....+.+.|.+||.+.+
T Consensus 238 GH~~~~-e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 238 GHACNV-TDPETFNALLLNGLASLL 261 (268)
T ss_dssp CTTHHH-HCHHHHHHHHHHHHHHHH
T ss_pred Ccchhh-cCHHHHHHHHHHHHHHhc
Confidence 997653 445578889999998754
No 120
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.76 E-value=5.8e-18 Score=173.39 Aligned_cols=227 Identities=19% Similarity=0.251 Sum_probs=136.6
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+.+|.+++.... + ..|.||++||++.+ ...|...+..|+++||.|+++|+|| +|.+... ..
T Consensus 12 ~~~~g~~l~y~~~------G--~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~ 73 (281)
T 3fob_A 12 ENQAPIEIYYEDH------G--TGKPVVLIHGWPLS--GRSWEYQVPALVEAGYRVITYDRRG---FGKSSQP-----WE 73 (281)
T ss_dssp ETTEEEEEEEEEE------S--SSEEEEEECCTTCC--GGGGTTTHHHHHHTTEEEEEECCTT---STTSCCC-----SS
T ss_pred CCCCceEEEEEEC------C--CCCeEEEECCCCCc--HHHHHHHHHHHHhCCCEEEEeCCCC---CCCCCCC-----cc
Confidence 3455666654433 1 23678999998765 3467777888999999999999999 5544211 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhh-CCCceeEEEecCCccchhhhh-cC-CCCCc-c----
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-GT-TDIPD-W---- 665 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~p~~~~~~~~-~~-~~~~~-~---- 665 (771)
....+++.+.+..+++. ++.+++.|+||||||.+++.+++. +|++++++|+.++........ .. ..... .
T Consensus 74 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (281)
T 3fob_A 74 GYEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIET 151 (281)
T ss_dssp CCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHH
Confidence 23455555555555555 245689999999999987776655 589999999887642110000 00 00000 0
Q ss_pred ----------hhh----hhccCCCCccCCCCCChhh-------------------HHHHhhcCcccccCCCCCcEEEEee
Q 004141 666 ----------CYV----ESYGSKGKDSFTESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLG 712 (771)
Q Consensus 666 ----------~~~----~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~lii~G 712 (771)
.+. ..+..... ......... ...+...+....+.++++|+|+++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G 229 (281)
T 3fob_A 152 FKSGVINDRLAFLDEFTKGFFAAGD--RTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHG 229 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCBTT--BCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred HHHHhhhhHHHHHHHHHHHhccccc--ccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEec
Confidence 000 00000000 000000000 0111122333457889999999999
Q ss_pred CCCCccCcHHH-HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 713 AQDLRVPVSNG-LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 713 ~~D~~vp~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
++|..+|++.+ +.+.+.+. +.++++++++||.+.. +...++.+.+.+||+
T Consensus 230 ~~D~~~p~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 230 DSDATVPFEYSGKLTHEAIP----NSKVALIKGGPHGLNA-THAKEFNEALLLFLK 280 (281)
T ss_dssp TTCSSSCGGGTHHHHHHHST----TCEEEEETTCCTTHHH-HTHHHHHHHHHHHHC
T ss_pred CCCCCcCHHHHHHHHHHhCC----CceEEEeCCCCCchhh-hhHHHHHHHHHHHhh
Confidence 99999999876 44434333 3789999999998653 344578888888875
No 121
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.76 E-value=5.6e-18 Score=175.33 Aligned_cols=233 Identities=14% Similarity=0.134 Sum_probs=149.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECCCCCCCCChhhhhc--CCCCc
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQS--LPGKV 592 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~Vv~~d~rG~~~~g~~~~~~--~~~~~ 592 (771)
+.++..+ +.|. .+++|+||++||++.......|... .+.+++.||.|+++|++++..+.. +... ..+..
T Consensus 20 ~~~i~v~-~~p~----~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~-~~~~~~~~g~~ 93 (304)
T 1sfr_A 20 GRDIKVQ-FQSG----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSD-WYQPACGKAGC 93 (304)
T ss_dssp TEEEEEE-EECC----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCB-CSSCEEETTEE
T ss_pred CCceEEE-ECCC----CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccc-cCCcccccccc
Confidence 4567666 4443 2678999999997532223344432 356778899999999987543321 1000 00000
Q ss_pred cccchhhHH--HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcC-------CCCC
Q 004141 593 GSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-------TDIP 663 (771)
Q Consensus 593 ~~~~~~D~~--~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~-------~~~~ 663 (771)
.....+++. +.+.++.++..+++++++|+|+||||++|+.++.++|++|+++++.+|..+....... ....
T Consensus 94 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~ 173 (304)
T 1sfr_A 94 QTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAG 173 (304)
T ss_dssp ECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhhHhhhhcc
Confidence 112233322 3344444433467789999999999999999999999999999999998754321000 0000
Q ss_pred cchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCC---CCcEEEEeeCCCC--------------ccCcHHHHHH
Q 004141 664 DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQY 726 (771)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~lii~G~~D~--------------~vp~~~~~~~ 726 (771)
.+.....++. + ....+...+|...+.++ .+|+++++|+.|+ .++.++++++
T Consensus 174 ~~~~~~~~g~---------~---~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~ 241 (304)
T 1sfr_A 174 GYKASDMWGP---------K---EDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKF 241 (304)
T ss_dssp SCCHHHHHCS---------T---TSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHH
T ss_pred ccchHHhcCC---------c---chhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHH
Confidence 0000011111 1 11245566676555544 5899999999998 6788999999
Q ss_pred HHHHHhCC-CCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 727 ARALREKG-VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 727 ~~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++.|++.| +++++.++++++|.+. .....+..++.||.++|+
T Consensus 242 ~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 284 (304)
T 1sfr_A 242 QDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALG 284 (304)
T ss_dssp HHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHT
T ss_pred HHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcC
Confidence 99999999 9999999987799752 123556778889988764
No 122
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.76 E-value=5.3e-18 Score=173.25 Aligned_cols=213 Identities=18% Similarity=0.280 Sum_probs=131.9
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... .....+++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~a~dl~~~l~~--l~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQPT-----TGYDYDTFAADLNTVLET--LDLQD 91 (277)
T ss_dssp SEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCC---CCCCCCCC-----CCccHHHHHHHHHHHHHH--hCCCc
Confidence 459999997765 4578888999999999999999999 55543211 122344444444444433 23468
Q ss_pred EEEEEcChhHHHHHHHHhhCCC-ceeEEEecCCccchhhhh-cCCC--CC-cc-------------hhhhhccCCCCcc-
Q 004141 618 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMV-GTTD--IP-DW-------------CYVESYGSKGKDS- 678 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~p~~~~~~~~-~~~~--~~-~~-------------~~~~~~~~~~~~~- 678 (771)
+.|+||||||.+++.++.++|+ +++++|+.++........ .... .+ .. .....+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLD 171 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHH
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhcc
Confidence 9999999999999999999998 999999988743211000 0000 00 00 0000000000000
Q ss_pred --CCCCCChhhHHHH----------------h--hcCcccccCCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCCE
Q 004141 679 --FTESPSVEDLTRF----------------H--SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 737 (771)
Q Consensus 679 --~~~~~~~~~~~~~----------------~--~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 737 (771)
.......+....+ . ..+....+.++++|+|+++|++|..+|++.+ +.+.+.+.. .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~ 247 (277)
T 1brt_A 172 ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS----A 247 (277)
T ss_dssp HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTT----S
T ss_pred ccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCC----C
Confidence 0000011111100 0 1122235678899999999999999999887 777766543 6
Q ss_pred EEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 738 KVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 738 ~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
++++++++||..... ...++.+.+.+||+
T Consensus 248 ~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 248 EYVEVEGAPHGLLWT-HAEEVNTALLAFLA 276 (277)
T ss_dssp EEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred cEEEeCCCCcchhhh-CHHHHHHHHHHHHh
Confidence 899999999986533 45578888888986
No 123
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=9.1e-17 Score=187.37 Aligned_cols=263 Identities=11% Similarity=0.070 Sum_probs=175.5
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+..++|||| ++++|..+ ..+++++ .+++..+++...... ..++|||||++|+|+.
T Consensus 83 ~v~~~~~spd-~~~~~~~~-----~~i~~~d~~~~~~~~l~~~~~~~----------~~~~~SpdG~~la~~~------- 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQ-----GGLVGFDMLARKVTYLFDTNEET----------ASLDFSPVGDRVAYVR------- 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEET-----TEEEEEETTTTEEEEEECCTTCC----------TTCEECTTSSEEEEEE-------
T ss_pred CceeEEECCC-CeEEEEEC-----CEEEEEECCCCceEEccCCcccc----------cCCcCCCCCCEEEEEE-------
Confidence 4778999999 88888755 3466655 555555555443333 5899999999999962
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccC-----CceeeccCCCCCCc------------
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-----GEVQAVKGIPKSLS------------ 241 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-----~~~~~l~~~~~~~~------------ 241 (771)
...|++||+.+ ++.+++ +.....
T Consensus 140 --------------------------------------~~~i~v~~~~~~~~~~g~~~~~--~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 140 --------------------------------------NHNLYIARGGKLGEGMSRAIAV--TIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp --------------------------------------TTEEEEEECBCTTSCCCCCEES--CSCCBTTEEESSCCGGGC
T ss_pred --------------------------------------CCeEEEEecCcccccCCCcEEe--ccCCCCCeEcccchhhhh
Confidence 25799999999 888887 333222
Q ss_pred ---cceEEEecCCCCCccEEEEEeecCccee--------------eeeeee----ccCCceeEEEecccccchhhhhhhh
Q 004141 242 ---VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYKSEASELELK 300 (771)
Q Consensus 242 ---~~~~~wspDg~~~~~~l~~~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~ 300 (771)
+..+.|||||+. |+|.+....... ....|. .+....|+++|+
T Consensus 180 ~~~~~~~~~SpDg~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~------------- 242 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSC----LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL------------- 242 (706)
T ss_dssp TTCCCSEEECTTSSE----EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET-------------
T ss_pred cCCCceEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC-------------
Confidence 478999999999 999874321100 000000 113357999998
Q ss_pred cCCCCCCcceecCC---CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC-CCCCCccceeeEEeccc
Q 004141 301 ESSSEDLPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 301 ~~~~~~~~~~~lt~---~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~ 376 (771)
++++.+.+.. ....+..+.|||||++|++.+.+.. .....|+++|+.++ ..+.+....
T Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~~~~~~-------- 304 (706)
T 2z3z_A 243 ----ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA------QNECKVNAYDAETGRFVRTLFVET-------- 304 (706)
T ss_dssp ----TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT------SCEEEEEEEETTTCCEEEEEEEEE--------
T ss_pred ----CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC------CCeeEEEEEECCCCceeeEEEEcc--------
Confidence 7777666653 2345788999999999999876531 23467999999887 322221110
Q ss_pred ccCCCCCcccccCCCCCCcccc--CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCcee-eEEeecCCEEEEEEeC
Q 004141 377 CAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSW-SLLTLDGDNIIAVSSS 453 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~--Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~-~~~s~dg~~l~~~~~~ 453 (771)
... |......+.||| ||+ +++++..++..+||.++.+++.++.++........ ..|++||+.|++..+.
T Consensus 305 ---~~~----~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 305 ---DKH----YVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp ---CSS----CCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred ---CCC----eECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 000 101134678999 998 55666667788999999878888888776544433 6899999999888765
Q ss_pred CCC-CCeEEEEEeccc
Q 004141 454 PVD-VPQVKYGYFVDK 468 (771)
Q Consensus 454 ~~~-p~~l~~~~~~~~ 468 (771)
... -..||..++.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 321 246787776543
No 124
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=3.1e-18 Score=165.98 Aligned_cols=187 Identities=13% Similarity=0.076 Sum_probs=119.0
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+|||+||...+..........+++.++ +|.|++||++| +|.+ ..+.++.++.. .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~---~g~~----------------~~~~l~~~~~~--~~ 60 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP---YPAE----------------AAEMLESIVMD--KA 60 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS---SHHH----------------HHHHHHHHHHH--HT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC---CHHH----------------HHHHHHHHHHh--cC
Confidence 48999999965443222223345566665 59999999998 4432 23334444433 24
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 694 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (771)
.++|+|+|+||||++|+.++.++|.....++...+............. .+. . ...+. ..... .....
T Consensus 61 ~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~---~~~~~--~~~~~--~~~~~ 127 (202)
T 4fle_A 61 GQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQ-NPY-----T---GQKYV--LESRH--IYDLK 127 (202)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEE-CTT-----T---CCEEE--ECHHH--HHHHH
T ss_pred CCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhc-ccc-----c---ccccc--chHHH--HHHHH
Confidence 678999999999999999999999887777665554332211100000 000 0 00000 00111 11122
Q ss_pred CcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 695 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 695 sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
.....+.++++|+|++||++|.+||++++.++++ ++++++++|++|.+... .++++.|.+||+
T Consensus 128 ~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 128 AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 3344567788999999999999999999888763 36899999999987543 356888999986
No 125
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.76 E-value=1.9e-17 Score=168.92 Aligned_cols=230 Identities=16% Similarity=0.188 Sum_probs=137.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++..+.|+ ..|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 6 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~~~ 69 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPR------DAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRG---HGRSSQV-----WDG 69 (276)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred CCCCcEEEEEecCCC------CCCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCCC-----CCC
Confidence 346777876665442 23679999997655 4468888899999999999999999 5554321 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhcCC--CCCcch-----
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~~~--~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++........... ..+...
T Consensus 70 ~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (276)
T 1zoi_A 70 HDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQ 147 (276)
T ss_dssp CSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHH
Confidence 2344444444444333 2346799999999999999988777 99999999988643110000000 000000
Q ss_pred ---------hhhhccC-CCC--ccCCCCCChhhHHH-------------------HhhcCcccccCCCCCcEEEEeeCCC
Q 004141 667 ---------YVESYGS-KGK--DSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~~~--~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~lii~G~~D 715 (771)
....+.. ... .............. +...+....+.++++|+|+++|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D 227 (276)
T 1zoi_A 148 AQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDD 227 (276)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCC
Confidence 0000000 000 00000001111000 1111222346678999999999999
Q ss_pred CccCcHHHHH-HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 716 LRVPVSNGLQ-YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~-~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
..+|++...+ +.+.+. +.++++++++||.+.. +...++.+.+.+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 228 QIVPYENSGVLSAKLLP----NGALKTYKGYPHGMPT-THADVINADLLAFIR 275 (276)
T ss_dssp SSSCSTTTHHHHHHHST----TEEEEEETTCCTTHHH-HTHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHhhCC----CceEEEcCCCCCchhh-hCHHHHHHHHHHHhc
Confidence 9999874443 333332 4899999999998653 345578888888885
No 126
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.76 E-value=3e-17 Score=167.16 Aligned_cols=229 Identities=18% Similarity=0.251 Sum_probs=136.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++..+. ..|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~g--------~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~-----~~~ 66 (273)
T 1a8s_A 5 TRDGTQIYYKDWG--------SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRG---HGRSSQP-----WSG 66 (273)
T ss_dssp CTTSCEEEEEEES--------CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred cCCCcEEEEEEcC--------CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCC---CCCCCCC-----CCC
Confidence 3456677544331 23679999997655 4468888899999999999999999 5544211 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhcC-C-CCCcch-----
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~~-~-~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.......... . ......
T Consensus 67 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (273)
T 1a8s_A 67 NDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIR 144 (273)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHH
Confidence 2344554444444444 3456899999999999999877765 8999999988864211000000 0 000000
Q ss_pred ---------hhhhccC-C--CCccCCCCCChhhHH-------------------HHhhcCcccccCCCCCcEEEEeeCCC
Q 004141 667 ---------YVESYGS-K--GKDSFTESPSVEDLT-------------------RFHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~--~~~~~~~~~~~~~~~-------------------~~~~~sp~~~~~~i~~P~lii~G~~D 715 (771)
....+.. . ............... .+...+....+.++++|+|+++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 224 (273)
T 1a8s_A 145 QASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDAD 224 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTC
T ss_pred HHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCC
Confidence 0000000 0 000000000101000 01112223346789999999999999
Q ss_pred CccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 716 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
..+|++...+.+..+. .+.++++++++||.+.. +...++.+.+.+||+
T Consensus 225 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 225 QVVPIEASGIASAALV---KGSTLKIYSGAPHGLTD-THKDQLNADLLAFIK 272 (273)
T ss_dssp SSSCSTTTHHHHHHHS---TTCEEEEETTCCSCHHH-HTHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHhC---CCcEEEEeCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 9999885444333332 24789999999998753 345578888999986
No 127
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.76 E-value=3.7e-17 Score=166.66 Aligned_cols=231 Identities=15% Similarity=0.194 Sum_probs=137.4
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++..+.|+ ..|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~~ 68 (275)
T 1a88_A 5 TSDGTNIFYKDWGPR------DGLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRG---HGRSDQP-----STG 68 (275)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred ccCCCEEEEEEcCCC------CCceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCc---CCCCCCC-----CCC
Confidence 346777876655432 23679999997655 4468888899999999999999999 5544211 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhc--CCCCCcch-----
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVG--TTDIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~--~~~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++......... ....+...
T Consensus 69 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 1a88_A 69 HDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR 146 (275)
T ss_dssp CSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHH
Confidence 2344444444444433 2346899999999999999877776 999999999886431100000 00000000
Q ss_pred ---------hhhhccC-C--CCccCCCCCChhhHHH-------------------HhhcCcccccCCCCCcEEEEeeCCC
Q 004141 667 ---------YVESYGS-K--GKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~--~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~lii~G~~D 715 (771)
....+.. . ................ +...+....+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 226 (275)
T 1a88_A 147 AALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCC
Confidence 0000000 0 0000000001111000 1111222345678999999999999
Q ss_pred CccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 716 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
..+|++...+.+..+. .++++++++++||.+.. +...++.+.+.+||+
T Consensus 227 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 227 QVVPYADAAPKSAELL---ANATLKSYEGLPHGMLS-THPEVLNPDLLAFVK 274 (275)
T ss_dssp SSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHHH-HCHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHhhC---CCcEEEEcCCCCccHHH-hCHHHHHHHHHHHhh
Confidence 9999875444333322 24899999999998753 345678888999985
No 128
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.76 E-value=7e-18 Score=173.24 Aligned_cols=229 Identities=14% Similarity=0.106 Sum_probs=143.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|.++++..+-|+ ..|+||++||++.+ .. .|...+..| +.||.|+++|+|| +|.+... +.....
T Consensus 10 ~~g~~l~~~~~G~~------~~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~--~~~~~~ 75 (286)
T 2yys_A 10 VGEAELYVEDVGPV------EGPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRG---SGRSLEL--PQDPRL 75 (286)
T ss_dssp CSSCEEEEEEESCT------TSCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTT---STTSCCC--CSCGGG
T ss_pred ECCEEEEEEeecCC------CCCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCC---CCCCCCC--ccCccc
Confidence 35777877666442 34789999998765 44 577777777 5689999999999 5554310 111012
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh----hh-cC--CCCCc-ch
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MV-GT--TDIPD-WC 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~----~~-~~--~~~~~-~~ 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|+ ++++|+.+|...... .. .. ..... ..
T Consensus 76 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T 2yys_A 76 FTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEE 152 (286)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHH
T ss_pred CcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHH
Confidence 3455555555555554 234689999999999999999999999 999999998653221 00 00 00000 00
Q ss_pred -hh------------hhc--cCC-------CC-ccCCCCCChhhHH-----HHhhcCcccccCCCCCcEEEEeeCCCCcc
Q 004141 667 -YV------------ESY--GSK-------GK-DSFTESPSVEDLT-----RFHSKSPISHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 667 -~~------------~~~--~~~-------~~-~~~~~~~~~~~~~-----~~~~~sp~~~~~~i~~P~lii~G~~D~~v 718 (771)
.. ..+ ... .. ..+.......... .....+....+.++++|+|+++|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 232 (286)
T 2yys_A 153 NLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232 (286)
T ss_dssp HHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTT
T ss_pred HHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcC
Confidence 00 000 000 00 0000000000000 01111233456788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
|++ ++.+.+ +.. .++++++++||...... ..++.+.+.+||++
T Consensus 233 ~~~-~~~~~~-~~~----~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 233 YPY-AEEVAS-RLR----APIRVLPEAGHYLWIDA-PEAFEEAFKEALAA 275 (286)
T ss_dssp TTT-HHHHHH-HHT----CCEEEETTCCSSHHHHC-HHHHHHHHHHHHHT
T ss_pred CHh-HHHHHh-CCC----CCEEEeCCCCCCcChhh-HHHHHHHHHHHHHh
Confidence 999 888888 765 57889999999866443 46788899999976
No 129
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.76 E-value=6.7e-18 Score=171.06 Aligned_cols=221 Identities=14% Similarity=0.107 Sum_probs=138.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004141 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
....|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... ......++..+.+..+++.- -
T Consensus 9 ~~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G---~G~S~~~~----~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGA---SGINPKQA----LQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp -CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEecccc---CCCCCCcC----CccCCHHHHHHHHHHHHHhc-C
Confidence 3456899999997765 4578888999999999999999999 44442210 11134555555555555542 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh-----hhcCC--CCCcchhhhhc-cCC--C--------
Q 004141 614 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTT--DIPDWCYVESY-GSK--G-------- 675 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~-----~~~~~--~~~~~~~~~~~-~~~--~-------- 675 (771)
+.+++.|+|||+||.+++.++.++|++++++|+.++...... ..... ....|...... ... .
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 467899999999999999999999999999998887542210 00000 00011000000 000 0
Q ss_pred ----CccCCCCCChhhHHH---------------HhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004141 676 ----KDSFTESPSVEDLTR---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 676 ----~~~~~~~~~~~~~~~---------------~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
...+......+.... +............++|+|+++|++|..+|++..+.+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---- 234 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP---- 234 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC----
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC----
Confidence 000000111111110 111111111222358999999999999999888888776643
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++++++++||.+.. +...++.+.+.+|++++
T Consensus 235 ~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 235 DEVKEIEGSDHVTMM-SKPQQLFTTLLSIANKY 266 (267)
T ss_dssp SEEEECTTCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCccccc-cChHHHHHHHHHHHHhc
Confidence 689999999998654 34567888899999874
No 130
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.75 E-value=2.4e-17 Score=167.96 Aligned_cols=228 Identities=15% Similarity=0.198 Sum_probs=137.2
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++..+. ..|+||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... ...
T Consensus 5 ~~~g~~l~y~~~g--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~~-----~~~ 66 (274)
T 1a8q_A 5 TRDGVEIFYKDWG--------QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRG---HGHSTPV-----WDG 66 (274)
T ss_dssp CTTSCEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCC-----SSC
T ss_pred ccCCCEEEEEecC--------CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCC---CCCCCCC-----CCC
Confidence 3456677654431 23679999997655 4468888889999999999999999 5544211 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhcC-C-CCCcchh----
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWCY---- 667 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~~-~-~~~~~~~---- 667 (771)
...+++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.......... . .......
T Consensus 67 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (274)
T 1a8q_A 67 YDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALK 144 (274)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHH
Confidence 2344555444444444 2456899999999999999877766 8999999998864311000000 0 0000000
Q ss_pred ----------hh----hccCCCCccCCCCCChhhH-------------------HHHhhcCcccccCCCCCcEEEEeeCC
Q 004141 668 ----------VE----SYGSKGKDSFTESPSVEDL-------------------TRFHSKSPISHISKVKTPTIFLLGAQ 714 (771)
Q Consensus 668 ----------~~----~~~~~~~~~~~~~~~~~~~-------------------~~~~~~sp~~~~~~i~~P~lii~G~~ 714 (771)
.. .+.. ............. ..+...+....+.++++|+|+++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 222 (274)
T 1a8q_A 145 NGVLTERSQFWKDTAEGFFS--ANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDD 222 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--TTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred HHhhccHHHHHHHhcccccc--cccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCc
Confidence 00 0000 0000000000000 00111223345678999999999999
Q ss_pred CCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC-CChHHHHHHHHHHHH
Q 004141 715 DLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFK 767 (771)
Q Consensus 715 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~fl~ 767 (771)
|..+|++...+.+..+. .+.++++++++||.+... +...++.+.+.+||+
T Consensus 223 D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 223 DQVVPIDATGRKSAQII---PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp CSSSCGGGTHHHHHHHS---TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHhhC---CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 99999885444333321 247899999999987754 245678888888885
No 131
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.75 E-value=4.6e-18 Score=177.12 Aligned_cols=221 Identities=17% Similarity=0.195 Sum_probs=141.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++....+ .|+||++||++.. ...|...+..|++ ||.|+++|+||. |.+. .......
T Consensus 56 ~~~~~~~~~~g~--------~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~---G~S~-----~~~~~~~ 116 (314)
T 3kxp_A 56 GRITLNVREKGS--------GPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRGH---GLSD-----KPETGYE 116 (314)
T ss_dssp SSCEEEEEEECC--------SSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTTS---TTSC-----CCSSCCS
T ss_pred CCEEEEEEecCC--------CCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCCc---CCCC-----CCCCCCC
Confidence 566676554422 5789999997755 3467777777766 799999999994 4432 1122234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh--------cCCC--CCcch
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------GTTD--IPDWC 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~--------~~~~--~~~~~ 666 (771)
.+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|........ .... ...+.
T Consensus 117 ~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (314)
T 3kxp_A 117 ANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIK 194 (314)
T ss_dssp HHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHH
T ss_pred HHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHH
Confidence 56666666666554 234789999999999999999999999999999998765321110 0000 00000
Q ss_pred hhhhccCCCCccCCCCCChhhHHHH---------------------------hhcCcccccCCCCCcEEEEeeCCCCccC
Q 004141 667 YVESYGSKGKDSFTESPSVEDLTRF---------------------------HSKSPISHISKVKTPTIFLLGAQDLRVP 719 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~sp~~~~~~i~~P~lii~G~~D~~vp 719 (771)
....+. ...+... .......+ ...+....+.++++|+|+++|++|..+|
T Consensus 195 ~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~ 270 (314)
T 3kxp_A 195 AVEAYL---AGRYPNI-PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVS 270 (314)
T ss_dssp HHHHHH---HHHSTTS-CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred HHHHHH---HhhcccC-chHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCC
Confidence 000000 0000000 00000000 0113444567789999999999999999
Q ss_pred cHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 720 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 720 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
++.+..+.+.+.. +++++++++||.+.. +....+.+.+.+||+
T Consensus 271 ~~~~~~~~~~~~~----~~~~~~~g~gH~~~~-e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 271 AAALAKTSRLRPD----LPVVVVPGADHYVNE-VSPEITLKAITNFID 313 (314)
T ss_dssp HHHHHHHHHHCTT----SCEEEETTCCSCHHH-HCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC----ceEEEcCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 9998888877643 688999999998653 334577888888886
No 132
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.75 E-value=1.1e-17 Score=183.14 Aligned_cols=232 Identities=16% Similarity=0.205 Sum_probs=142.8
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+.+.+|..++.... + ..|+||++||++.. ...|...+..|+++||.|+++|+||. |.+... .
T Consensus 8 ~~~~dG~~l~y~~~------G--~gp~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG~---G~S~~~-----~ 69 (456)
T 3vdx_A 8 QENSTSIDLYYEDH------G--TGVPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGF---GQSSQP-----T 69 (456)
T ss_dssp EETTEEEEEEEEEE------S--SSEEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTTS---TTSCCC-----S
T ss_pred ccccCCeEEEEEEe------C--CCCEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCCC---CCCCCC-----C
Confidence 34556777764332 1 34899999998765 34677788899899999999999994 443211 1
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhcCCCCCc-------
Q 004141 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTTDIPD------- 664 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~~~~~~~------- 664 (771)
....++++.+.+..+++. ++.++++|+|||+||.+++.+++.+ |++++++|+.+|...............
T Consensus 70 ~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 147 (456)
T 3vdx_A 70 TGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFD 147 (456)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHH
Confidence 122344444444444433 2456899999999999999888876 899999999998753211100000000
Q ss_pred ----------chh----hhhccCCCCccCCCCCChhhHHHH------------------hhcCcccccCCCCCcEEEEee
Q 004141 665 ----------WCY----VESYGSKGKDSFTESPSVEDLTRF------------------HSKSPISHISKVKTPTIFLLG 712 (771)
Q Consensus 665 ----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~sp~~~~~~i~~P~lii~G 712 (771)
... ...+... ...............+ ...+....+.++++|+|+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G 226 (456)
T 3vdx_A 148 GIVAAVKADRYAFYTGFFNDFYNL-DENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 226 (456)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTT-TTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEE
T ss_pred HHHHhhhccchHHHHHHHHHHhcc-cccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEe
Confidence 000 0000000 0000000000000000 012333456788999999999
Q ss_pred CCCCccCcH-HHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 713 AQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 713 ~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
++|..+|++ ....+.+.+ .+++++++++++|.+.. +....+.+.+.+||++++
T Consensus 227 ~~D~~vp~~~~~~~l~~~~----~~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 227 TGDRTLPIENTARVFHKAL----PSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TTCSSSCGGGTHHHHHHHC----TTSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHC----CCceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhh
Confidence 999999988 444444433 34799999999998765 556688999999999875
No 133
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.75 E-value=6.7e-18 Score=170.13 Aligned_cols=218 Identities=16% Similarity=0.098 Sum_probs=137.2
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+... .......++..+.+..+++.-.. .++
T Consensus 5 ~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~----~~~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAA---SGIDPRP----IQAVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSSC----GGGCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCC---CcCCCCC----CCccccHHHhHHHHHHHHHHhcc-cCc
Confidence 889999997765 4467888999999999999999999 4443211 01113455555555555554322 378
Q ss_pred EEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh------cC-CCCCcchhhhhc---cC-----------C-C
Q 004141 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------GT-TDIPDWCYVESY---GS-----------K-G 675 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~------~~-~~~~~~~~~~~~---~~-----------~-~ 675 (771)
+.|+|||+||.+++.++.++|++++++|+.+|........ .. .....|...... +. . .
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFM 154 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHH
Confidence 9999999999999999999999999999988854221000 00 000011000000 00 0 0
Q ss_pred CccCCCCCChhhHHHHh--------------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 676 KDSFTESPSVEDLTRFH--------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 676 ~~~~~~~~~~~~~~~~~--------------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
...+......+....+. ...........++|+|+++|++|..+|++.++.+.+.+.. .++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 230 (258)
T 3dqz_A 155 KARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV----SKVYE 230 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC----SCEEE
T ss_pred HHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc----ccEEE
Confidence 00000011111111110 0111222223368999999999999999988888777643 58889
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 742 FPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
++++||.... +....+.+.+.+|+++||
T Consensus 231 ~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 231 IDGGDHMVML-SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp ETTCCSCHHH-HSHHHHHHHHHHHHHHTC
T ss_pred cCCCCCchhh-cChHHHHHHHHHHHHHhC
Confidence 9999998664 445688899999999885
No 134
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.75 E-value=3.4e-17 Score=162.66 Aligned_cols=203 Identities=12% Similarity=0.106 Sum_probs=134.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCCCC------CChhhhhcCCCCc
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSLG------FGEEALQSLPGKV 592 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vv~~d~rG~~~------~g~~~~~~~~~~~ 592 (771)
+...++.|+ .+.+++||++||.+.+. ..+...+..|.. .++.+++|+-+..+. .+..|........
T Consensus 25 l~y~ii~P~----~~~~~~VI~LHG~G~~~--~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~ 98 (246)
T 4f21_A 25 MNYELMEPA----KQARFCVIWLHGLGADG--HDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDA 98 (246)
T ss_dssp CCEEEECCS----SCCCEEEEEEEC--CCC--CCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC--
T ss_pred cCceEeCCC----CcCCeEEEEEcCCCCCH--HHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccc
Confidence 556688885 23467999999966542 344444444432 368888887432110 0112211110000
Q ss_pred -------cccchhhHHHHHHHHHH---cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCC
Q 004141 593 -------GSQDVNDVLTAIDHVID---MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI 662 (771)
Q Consensus 593 -------~~~~~~D~~~~i~~l~~---~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~ 662 (771)
....+....+.++.+++ +..++++||+++|+|+||.+++.++.++|+.++++++.++........
T Consensus 99 ~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~----- 173 (246)
T 4f21_A 99 NSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF----- 173 (246)
T ss_dssp -CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH-----
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc-----
Confidence 00112233333333332 235899999999999999999999999999999999988864211100
Q ss_pred CcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004141 663 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
.. ... ....++|+|++||+.|++||++.++++++.|++.|.++++..|
T Consensus 174 ---------~~-------------------~~~----~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y 221 (246)
T 4f21_A 174 ---------KG-------------------KIT----SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY 221 (246)
T ss_dssp ---------ST-------------------TCC----GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred ---------cc-------------------ccc----ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 00 000 0113579999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 743 PNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 743 ~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
++.||.+. .+.+..+.+||++.|+
T Consensus 222 ~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 222 VGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp SSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred CCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 99999875 4567899999999886
No 135
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.75 E-value=5e-18 Score=172.28 Aligned_cols=227 Identities=15% Similarity=0.251 Sum_probs=141.6
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.++++...-+ +..|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+... . .
T Consensus 10 ~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG---~G~S~~~--~---~ 72 (266)
T 3om8_A 10 ATSDGASLAYRLDGA------AEKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARG---HGASSVP--P---G 72 (266)
T ss_dssp ECTTSCEEEEEEESC------TTSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTT---STTSCCC--C---S
T ss_pred eccCCcEEEEEecCC------CCCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCC---CCCCCCC--C---C
Confidence 345688887766543 235889999997655 4467778888865 79999999999 5554321 1 1
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh----------hhcCCCCC
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----------MVGTTDIP 663 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~----------~~~~~~~~ 663 (771)
...++++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++...... ........
T Consensus 73 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 73 PYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMS 150 (266)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHH
Confidence 23355555555555554 2346899999999999999999999999999999876432100 00000000
Q ss_pred cch--hhhhccCCCCccCCCCCC-hhhH----------------HHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHH
Q 004141 664 DWC--YVESYGSKGKDSFTESPS-VEDL----------------TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 724 (771)
Q Consensus 664 ~~~--~~~~~~~~~~~~~~~~~~-~~~~----------------~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~ 724 (771)
... ....+... ......+. .+.. ..+...+....+.++++|+|+++|++|..+|++.++
T Consensus 151 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 151 ETAAGFLGNWFPP--ALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHHHHSCH--HHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHHHHhcCh--hhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 000 00000000 00000000 0000 011112223456789999999999999999999998
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 725 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
.+.+.+.. .++++++ +||... .+....+.+.+.+||.
T Consensus 229 ~l~~~ip~----a~~~~i~-~gH~~~-~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 229 LIAASIAG----ARLVTLP-AVHLSN-VEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHSTT----CEEEEES-CCSCHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHhCCC----CEEEEeC-CCCCcc-ccCHHHHHHHHHHHhc
Confidence 88887764 6888887 799765 3444577788888874
No 136
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.75 E-value=4.5e-18 Score=188.27 Aligned_cols=242 Identities=13% Similarity=0.097 Sum_probs=157.9
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----------------cc----hHHHHHHHHCCcEEE
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------------SY----SKSLAFLSSVGYSLL 570 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----------------~~----~~~~~~la~~G~~Vv 570 (771)
.+...||.+|.+.+|.|++ .++.|+||+.||.+...... .+ ...++.|+++||+|+
T Consensus 45 ~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 4556689999999999983 57899999999854432100 00 013678999999999
Q ss_pred EECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc
Q 004141 571 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 571 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~ 650 (771)
++|+||.++++..+. .++..+.+|+.++++|+.+++.++ .||+++|+|+||++++.+|+.+|+.++|+|+.+|+
T Consensus 122 ~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 122 KVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp EEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred EEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 999999877765432 334467899999999999887776 89999999999999999999999999999999999
Q ss_pred cchhhh-hcCCCCCcchhh--------hhccCC-CCc----cCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCC
Q 004141 651 CNLALM-VGTTDIPDWCYV--------ESYGSK-GKD----SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 651 ~~~~~~-~~~~~~~~~~~~--------~~~~~~-~~~----~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~ 716 (771)
.++..- ..........+. ..+... ... .+...+..+ ..+...++ .+.+|++|+|+++|-.|.
T Consensus 196 ~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d--~~W~~~~~--~~~~I~vPvl~v~Gw~D~ 271 (560)
T 3iii_A 196 NDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD--DFWKQRQV--PLSQIKTPLLTCASWSTQ 271 (560)
T ss_dssp CBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC--HHHHTTBC--CGGGCCSCEEEEEEGGGT
T ss_pred ccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc--hHhhccCC--chhhCCCCEEEeCCcCCC
Confidence 886531 110001100000 000000 000 000111111 12333444 578999999999999997
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.+....+.+.+++++..+ ..+++. +.+|.... -..+..+..++||++|||
T Consensus 272 ~~~~~g~l~~y~~l~~~~--k~l~ih-~~~~~~~~--~~~~~~~~~~~wfD~~Lk 321 (560)
T 3iii_A 272 GLHNRGSFEGFKQAASEE--KWLYVH-GRKEWESY--YARENLERQKSFFDFYLK 321 (560)
T ss_dssp TTTHHHHHHHHHHCCCSS--EEEEEE-SSCHHHHH--HSHHHHHHHHHHHHHHTS
T ss_pred cccchhHHHHHHhccccC--cEEEEC-CCCCcCcc--cChhHHHHHHHHHHHHhC
Confidence 555566667777665432 233333 22332100 012456789999999996
No 137
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.75 E-value=7e-18 Score=174.78 Aligned_cols=227 Identities=15% Similarity=0.174 Sum_probs=143.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.+++..... +.|+||++||.+.+ ...|...+..|.++||.|+++|+|| +|.+... .....
T Consensus 17 ~g~~l~~~~~g--------~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G---~G~S~~~-----~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDEG--------SGQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIG---MGDSAKP-----DIEYR 78 (309)
T ss_dssp TTEEEEEEEEE--------CSSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCCC-----SSCCC
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCC---CCCCCCC-----CcccC
Confidence 57777655442 24789999997765 3457777888788999999999999 4444321 11234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh--------------hcCCCC
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM--------------VGTTDI 662 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~--------------~~~~~~ 662 (771)
.+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|....... ......
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 79 LQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 56666666655554 23478999999999999999999999999999998875432100 000000
Q ss_pred C---------cchhhhhccCCCCccCCCCCChhhHHHHh-----------------hc--------------CcccccCC
Q 004141 663 P---------DWCYVESYGSKGKDSFTESPSVEDLTRFH-----------------SK--------------SPISHISK 702 (771)
Q Consensus 663 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------------sp~~~~~~ 702 (771)
+ ...+...+.... ........+....+. .. +....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEM--GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA 234 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHT--SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccccceehhhhcccc--cccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc
Confidence 0 000000000000 000000011111110 00 11123567
Q ss_pred CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 703 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 703 i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++|+|+++|++|..+|++.++.+.+.+.. .++++++++||.+.. +...++.+.|.+||++..
T Consensus 235 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 235 SPIPKLLFHAEPGALAPKPVVDYLSENVPN----LEVRFVGAGTHFLQE-DHPHLIGQGIADWLRRNK 297 (309)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHH-HCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHhhCCC----CEEEEecCCcccchh-hCHHHHHHHHHHHHHhcc
Confidence 899999999999999999888888777654 677778999997653 345678889999998764
No 138
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.74 E-value=1.9e-17 Score=169.06 Aligned_cols=233 Identities=15% Similarity=0.115 Sum_probs=144.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.|.++..+ |.|++ .|+||++||++.......|.. ..+.+++.||.|+++|++++..+.. +..... +
T Consensus 21 ~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~-~~~~~~---~ 89 (280)
T 1r88_A 21 MGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN-WEQDGS---K 89 (280)
T ss_dssp TTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB-CSSCTT---C
T ss_pred cCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCC-CCCCCC---C
Confidence 46778877 77763 289999999853222334433 3566778899999999987543311 110000 1
Q ss_pred ccchhh-H-HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004141 594 SQDVND-V-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 594 ~~~~~D-~-~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
...+ + .+.+.++.++..+++++++|+|+||||++|+.++.++|++|+++++.+|..+.........+... . ...
T Consensus 90 --~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~-~-~~~ 165 (280)
T 1r88_A 90 --QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG-M-QQF 165 (280)
T ss_dssp --BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH-H-HHH
T ss_pred --cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH-h-hhc
Confidence 1222 1 13334444434477789999999999999999999999999999999998764321000000000 0 000
Q ss_pred cCCCCccCCCCCChhhHHHHhhcCcccccCCC---CCcEEEEe----eCCCCc-------cCcHHHHHHHHHHHhCC-CC
Q 004141 672 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLL----GAQDLR-------VPVSNGLQYARALREKG-VE 736 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~lii~----G~~D~~-------vp~~~~~~~~~~l~~~g-~~ 736 (771)
+......+.+.+ ....+...+|...+.++ .+|+++.+ |+.|.. ++.++++++++.|++.| ++
T Consensus 166 ~~~~~~~~~g~~---~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~ 242 (280)
T 1r88_A 166 GGVDTNGMWGAP---QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHN 242 (280)
T ss_dssp HCCCTHHHHCCG---GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cccchhhhcCCC---chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 000000000000 11234455666555544 58999999 999984 68899999999999999 99
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++.++++++|.+. .....+...+.||.+-|
T Consensus 243 ~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~ 273 (280)
T 1r88_A 243 GHFDFPASGDNGWG---SWAPQLGAMSGDIVGAI 273 (280)
T ss_dssp EEEECCSSCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCcChh---HHHHHHHHHHHHHHHHH
Confidence 99999888899753 12234455666665544
No 139
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.74 E-value=1.1e-17 Score=178.96 Aligned_cols=246 Identities=13% Similarity=0.110 Sum_probs=148.1
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC----------C-cchHHH---HHHHHCCcEEEEECCCCCCC-----
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL----------S-SYSKSL---AFLSSVGYSLLIVNYRGSLG----- 579 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~----------~-~~~~~~---~~la~~G~~Vv~~d~rG~~~----- 579 (771)
.++++..+-+. ...+.|+||++||.+.+... . .|...+ ..|...||.|+++|+||.+.
T Consensus 27 ~~i~y~~~g~~---~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~ 103 (377)
T 3i1i_A 27 VQMGYETYGTL---NRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPH 103 (377)
T ss_dssp EEEEEEEESCC---CTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTT
T ss_pred eeEEEEeeccc---CCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCC
Confidence 44555555433 23456899999997765332 0 133344 46667899999999997532
Q ss_pred ---CChhhhhcCCCC-----ccccchhhHHHHHHHHHHcCCCCCCeEE-EEEcChhHHHHHHHHhhCCCceeEEEe-cCC
Q 004141 580 ---FGEEALQSLPGK-----VGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAA-RNP 649 (771)
Q Consensus 580 ---~g~~~~~~~~~~-----~~~~~~~D~~~~i~~l~~~~~~d~~ri~-l~G~S~GG~~a~~~a~~~p~~~~~~v~-~~p 649 (771)
+|.+......+. +....++++.+.+..+++. ++.+++. |+||||||.+++.+|.++|++++++|+ .++
T Consensus 104 ~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (377)
T 3i1i_A 104 VITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITN 181 (377)
T ss_dssp CCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCC
T ss_pred cccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcC
Confidence 111111000000 1133567777777777766 3456786 999999999999999999999999999 665
Q ss_pred ccchhhh-hc--------CCCCCcch-----------------------------hhhhccCCCCccC------------
Q 004141 650 LCNLALM-VG--------TTDIPDWC-----------------------------YVESYGSKGKDSF------------ 679 (771)
Q Consensus 650 ~~~~~~~-~~--------~~~~~~~~-----------------------------~~~~~~~~~~~~~------------ 679 (771)
....... .. ....+.|. +...+........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 3i1i_A 182 PQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFE 261 (377)
T ss_dssp SBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHH
T ss_pred CCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHH
Confidence 5431000 00 00000000 0000100000000
Q ss_pred ----------CCCCChhhH----HHHhhcC-------cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 680 ----------TESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 680 ----------~~~~~~~~~----~~~~~~s-------p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
......... ..+...+ ....+.++++|+|+++|++|..+|++.++.+++.++..+.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~ 341 (377)
T 3i1i_A 262 KEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAE 341 (377)
T ss_dssp HHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCce
Confidence 000000000 0000011 1234578899999999999999999999999999988777799
Q ss_pred EEEeCC-CCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 739 VIVFPN-DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 739 ~~~~~~-~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
++++++ +||...... ..++.+.|.+||++++
T Consensus 342 ~~~i~~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 342 VYEIESINGHMAGVFD-IHLFEKKVYEFLNRKV 373 (377)
T ss_dssp ECCBCCTTGGGHHHHC-GGGTHHHHHHHHHSCC
T ss_pred EEEcCCCCCCcchhcC-HHHHHHHHHHHHHhhh
Confidence 999998 999765433 3477889999998765
No 140
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.74 E-value=2.8e-18 Score=176.85 Aligned_cols=233 Identities=16% Similarity=0.160 Sum_probs=136.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++++..+.+ +.+.|.||++||+++.. ..|...+..+++.||.|+++|+|| +|.+.... .....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~----~~~~~ 78 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMS--HDYLLSLRDMTKEGITVLFYDQFG---CGRSEEPD----QSKFT 78 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCC--SGGGGGGGGGGGGTEEEEEECCTT---STTSCCCC----GGGCS
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcc--hhHHHHHHHHHhcCcEEEEecCCC---CccCCCCC----CCccc
Confidence 466666554432 11237899999976542 233333445567899999999999 55443211 11123
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcC-----CCCCcc--h---
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDW--C--- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~-----~~~~~~--~--- 666 (771)
++++.+.+..+++.- .+.+++.|+||||||.+++.+|.++|++++++|+.+|.......... ...+.. .
T Consensus 79 ~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T 1mtz_A 79 IDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK 157 (293)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHH
Confidence 444444444444431 02358999999999999999999999999999999987653211000 000000 0
Q ss_pred ------------hh---hhccCCCCccCCCCCCh--hhHH------HH---------------hhcCcccccCCCCCcEE
Q 004141 667 ------------YV---ESYGSKGKDSFTESPSV--EDLT------RF---------------HSKSPISHISKVKTPTI 708 (771)
Q Consensus 667 ------------~~---~~~~~~~~~~~~~~~~~--~~~~------~~---------------~~~sp~~~~~~i~~P~l 708 (771)
+. ..+...........+.. .... .+ ...+....+.++++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 237 (293)
T 1mtz_A 158 KYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTL 237 (293)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEE
T ss_pred HhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEE
Confidence 00 00000000000001100 0000 00 01112234567899999
Q ss_pred EEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 709 FLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 709 ii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++|++| .+++..++.+.+.+. +.++++++++||..... ....+.+.+.+||+++|
T Consensus 238 ii~G~~D-~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 238 ITVGEYD-EVTPNVARVIHEKIA----GSELHVFRDCSHLTMWE-DREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEEETTC-SSCHHHHHHHHHHST----TCEEEEETTCCSCHHHH-SHHHHHHHHHHHHHTCC
T ss_pred EEeeCCC-CCCHHHHHHHHHhCC----CceEEEeCCCCCCcccc-CHHHHHHHHHHHHHhcC
Confidence 9999999 677777777766653 37899999999986543 45678889999998764
No 141
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.74 E-value=5.7e-18 Score=190.33 Aligned_cols=243 Identities=14% Similarity=0.116 Sum_probs=161.6
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~-~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
+...||.+|.+.+|.|+ ..++.|+||++||.+..... ..|...+ +.|+++||+|+.+|+||+++++..+..
T Consensus 14 i~~~DG~~L~~~~~~P~---~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~---- 86 (587)
T 3i2k_A 14 VPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP---- 86 (587)
T ss_dssp EECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT----
T ss_pred EECCCCCEEEEEEEECC---CCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc----
Confidence 44567899999999997 34578999999985433110 0121123 789999999999999998776554321
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc-cchhhhh-cCCCCC-----
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIP----- 663 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~-~~~~~~~-~~~~~~----- 663 (771)
...+.+|+.++++|+.+++..+ .+|+++|+||||++++.++.++|+.++++|+.++. .++..-. ......
T Consensus 87 --~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~~ 163 (587)
T 3i2k_A 87 --HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEAL 163 (587)
T ss_dssp --TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHHH
T ss_pred --ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccchH
Confidence 2346899999999999886555 79999999999999999999989999999999988 6543210 000010
Q ss_pred -cchhhh------------------------------hc-cCCCC-------------ccC-CCCCChhhHHHHhhcCcc
Q 004141 664 -DWCYVE------------------------------SY-GSKGK-------------DSF-TESPSVEDLTRFHSKSPI 697 (771)
Q Consensus 664 -~~~~~~------------------------------~~-~~~~~-------------~~~-~~~~~~~~~~~~~~~sp~ 697 (771)
.|.... .+ ..... ... ...+ .....|...++.
T Consensus 164 ~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~yw~~~s~~ 241 (587)
T 3i2k_A 164 LGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP--DNDESWQSISLF 241 (587)
T ss_dssp HHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCC--SCCHHHHTTCCH
T ss_pred HHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCC--CCChHHhcCChh
Confidence 111100 00 00000 000 1111 112335566777
Q ss_pred cccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC---------CCChH---HHHHHHHHH
Q 004141 698 SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---------PQSDF---ESFLNIGLW 765 (771)
Q Consensus 698 ~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---------~~~~~---~~~~~i~~f 765 (771)
..+.+|++|+|+++|..|..+ ..+.+++++|+..+. .++++-|. .|+... +.... +..+.+++|
T Consensus 242 ~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~~~~~~~~~w 317 (587)
T 3i2k_A 242 ERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQEATTMHKAF 317 (587)
T ss_dssp HHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHHHHHHHHHHH
T ss_pred hhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccchhhHHHHHH
Confidence 788999999999999999886 456788999987664 35666554 465311 11111 334889999
Q ss_pred HHHhhC
Q 004141 766 FKKYCK 771 (771)
Q Consensus 766 l~~~L~ 771 (771)
|++|||
T Consensus 318 FD~~Lk 323 (587)
T 3i2k_A 318 FDRHLR 323 (587)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999996
No 142
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.74 E-value=1.1e-17 Score=173.54 Aligned_cols=226 Identities=17% Similarity=0.153 Sum_probs=139.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
++.+++++...+ +..|+||++||++.. ...|...+..|++ ||.|+++|+||.+ |.+... .....
T Consensus 53 ~~~~~~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-g~~vi~~D~~G~g--G~s~~~-----~~~~~ 116 (306)
T 2r11_A 53 RFGQTHVIASGP------EDAPPLVLLHGALFS--STMWYPNIADWSS-KYRTYAVDIIGDK--NKSIPE-----NVSGT 116 (306)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTTC--GGGGTTTHHHHHH-HSEEEEECCTTSS--SSCEEC-----SCCCC
T ss_pred CCceEEEEeeCC------CCCCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEecCCCCC--CCCCCC-----CCCCC
Confidence 455676555432 245889999998765 3357777788877 9999999999952 322211 11234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc------CCCC-Ccc--hh
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------TTDI-PDW--CY 667 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~------~~~~-~~~--~~ 667 (771)
.+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... .... ..+ .+
T Consensus 117 ~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (306)
T 2r11_A 117 RTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETF 194 (306)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHH
Confidence 56666666666655 3457899999999999999999999999999999998765311000 0000 000 00
Q ss_pred hhhccCCCCccCCCCCC--hhh-H---------------HHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004141 668 VESYGSKGKDSFTESPS--VED-L---------------TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 668 ~~~~~~~~~~~~~~~~~--~~~-~---------------~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~ 729 (771)
...+.... ....+. ... . ...........+.++++|+|+++|++|..+|++.+.++++.
T Consensus 195 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 271 (306)
T 2r11_A 195 LNWMMNDQ---NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASS 271 (306)
T ss_dssp HHHHTTTC---CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHH
T ss_pred HHHhhCCc---cccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHH
Confidence 00000000 000000 000 0 00001122234667899999999999999998887766554
Q ss_pred HHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 730 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 730 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
+. .++++++++++||.+... ...++.+.|.+||+
T Consensus 272 ~~---~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 272 FV---PDIEAEVIKNAGHVLSME-QPTYVNERVMRFFN 305 (306)
T ss_dssp HS---TTCEEEEETTCCTTHHHH-SHHHHHHHHHHHHC
T ss_pred HC---CCCEEEEeCCCCCCCccc-CHHHHHHHHHHHHh
Confidence 32 347999999999976533 34577788888875
No 143
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.74 E-value=6.9e-18 Score=171.29 Aligned_cols=228 Identities=15% Similarity=0.195 Sum_probs=141.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++++..+.|. +.+.|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+.... ....
T Consensus 10 ~g~~l~y~~~g~~----~~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G---~G~S~~~~-----~~~~ 74 (266)
T 2xua_A 10 NGTELHYRIDGER----HGNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRG---HGHSEAPK-----GPYT 74 (266)
T ss_dssp SSSEEEEEEESCS----SSCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTT---STTSCCCS-----SCCC
T ss_pred CCEEEEEEEcCCc----cCCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCC---CCCCCCCC-----CCCC
Confidence 5777887766442 1125889999996654 3467777888865 59999999999 55543211 1233
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh---hhc----C--CCCCcc--
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL---MVG----T--TDIPDW-- 665 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~---~~~----~--~~~~~~-- 665 (771)
++++.+.+..+++. +..+++.|+||||||.+++.+|.++|++++++|+.++...... +.. . ......
T Consensus 75 ~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (266)
T 2xua_A 75 IEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALAD 152 (266)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHH
Confidence 55555555555554 2346899999999999999999999999999999887542100 000 0 000000
Q ss_pred hhhhhccCC-CC-------c----cCCCCCChhh----HHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004141 666 CYVESYGSK-GK-------D----SFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 666 ~~~~~~~~~-~~-------~----~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~ 729 (771)
.....+... .. . .+.. ..... ...+...+....+.++++|+|+++|++|..+|++.++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 153 AVLPRWFTADYMEREPVVLAMIRDVFVH-TDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHHHHHSCHHHHHHCHHHHHHHHHHHHT-SCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHHHcCcccccCCHHHHHHHHHHHhh-CCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 000000000 00 0 0000 00000 011112233445678899999999999999999888888776
Q ss_pred HHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 730 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 730 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+.. .++++++ +||.+.... ..++.+.+.+||++
T Consensus 232 ~~~----~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 232 IAG----ARYVELD-ASHISNIER-ADAFTKTVVDFLTE 264 (266)
T ss_dssp STT----CEEEEES-CCSSHHHHT-HHHHHHHHHHHHTC
T ss_pred CCC----CEEEEec-CCCCchhcC-HHHHHHHHHHHHHh
Confidence 654 6889999 999865433 45788888889863
No 144
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.74 E-value=1.3e-17 Score=171.15 Aligned_cols=216 Identities=18% Similarity=0.245 Sum_probs=133.1
Q ss_pred CcEEEEEcCCC-CCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 537 DPLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~-~~~~~~~~~~~~-~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+||++||.+ +......|...+ ..|++. |.|+++|+|| +|.+.... . ....++++.+.+..+++. ++
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~---~-~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPG---FNKSDAVV---M-DEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTT---STTSCCCC---C-SSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCC---CCCCCCCC---C-cCcCHHHHHHHHHHHHHH--hC
Confidence 36899999964 222233466667 777665 9999999999 55543211 1 123456666655555555 24
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC------------CCcchhh----hhccCCCCcc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYV----ESYGSKGKDS 678 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~~~ 678 (771)
.+++.|+||||||.+++.+|.++|++++++|+.+|............ .+.+... ..+... ...
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYD-QSL 181 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSC-GGG
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcC-Ccc
Confidence 57899999999999999999999999999999887542100000000 0000000 000000 000
Q ss_pred CCC----------CCChhhHHHHh---------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004141 679 FTE----------SPSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 679 ~~~----------~~~~~~~~~~~---------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
... .........+. .......+.++++|+|+++|++|..+|++.++.+.+.+. ..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~----~~~~ 257 (286)
T 2puj_A 182 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID----DARL 257 (286)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS----SEEE
T ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC----CCeE
Confidence 000 00000000000 112234567889999999999999999998888877664 3799
Q ss_pred EEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 740 IVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 740 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
++++++||..... ...++.+.+.+||++
T Consensus 258 ~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 258 HVFSKCGAWAQWE-HADEFNRLVIDFLRH 285 (286)
T ss_dssp EEESSCCSCHHHH-THHHHHHHHHHHHHH
T ss_pred EEeCCCCCCcccc-CHHHHHHHHHHHHhc
Confidence 9999999976533 345788889999875
No 145
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.74 E-value=5.7e-18 Score=171.85 Aligned_cols=217 Identities=14% Similarity=0.138 Sum_probs=132.1
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
.|+||++||.+.. ...|...+..|++ .||.|+++|+|| +|.+..... ...+++.+.+..+++.. .+.
T Consensus 21 ~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G---~G~s~~~~~------~~~~~~~~~~~~~l~~~-~~~ 88 (272)
T 3fsg_A 21 GTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPG---MGNSDPISP------STSDNVLETLIEAIEEI-IGA 88 (272)
T ss_dssp SSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTT---STTCCCCSS------CSHHHHHHHHHHHHHHH-HTT
T ss_pred CCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCC---CCCCCCCCC------CCHHHHHHHHHHHHHHH-hCC
Confidence 4789999997654 3356666667766 799999999999 444422111 23444443333333320 134
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC----ccC---CCCCChhhH
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK----DSF---TESPSVEDL 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~ 688 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|.....................+..... ..+ .........
T Consensus 89 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (272)
T 3fsg_A 89 RRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAW 168 (272)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHHH
T ss_pred CcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCchh
Confidence 7899999999999999999999999999999988753221111100000000000000000 000 000000000
Q ss_pred HH-------------------Hhh-----cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 689 TR-------------------FHS-----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 689 ~~-------------------~~~-----~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
.. +.. ..+...+.++++|+|+++|++|..+|++..+.+.+.+. +++++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 244 (272)
T 3fsg_A 169 HDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE----NGEIVLLNR 244 (272)
T ss_dssp HHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT----TEEEEEESS
T ss_pred HHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC----CCeEEEecC
Confidence 00 000 00111347789999999999999999998888776653 489999999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+||.+... ...++.+.+.+||++..
T Consensus 245 ~gH~~~~~-~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 245 TGHNLMID-QREAVGFHFDLFLDELN 269 (272)
T ss_dssp CCSSHHHH-THHHHHHHHHHHHHHHH
T ss_pred CCCCchhc-CHHHHHHHHHHHHHHhh
Confidence 99986643 35678889999998753
No 146
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.74 E-value=5.4e-17 Score=163.35 Aligned_cols=224 Identities=16% Similarity=0.223 Sum_probs=135.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.+++.....+ ..|.||++||.+.+. ...|...+..|+++||.|+++|+|| +|.+... ...+....
T Consensus 10 ~g~~l~~~~~g~-------~~~~vvllHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~--~~~~~~~~ 76 (254)
T 2ocg_A 10 NGVQLHYQQTGE-------GDHAVLLLPGMLGSG-ETDFGPQLKNLNKKLFTVVAWDPRG---YGHSRPP--DRDFPADF 76 (254)
T ss_dssp TTEEEEEEEEEC-------CSEEEEEECCTTCCH-HHHCHHHHHHSCTTTEEEEEECCTT---STTCCSS--CCCCCTTH
T ss_pred CCEEEEEEEecC-------CCCeEEEECCCCCCC-ccchHHHHHHHhhCCCeEEEECCCC---CCCCCCC--CCCCChHH
Confidence 466676544421 236799999965431 2347778888888899999999999 4544211 11111111
Q ss_pred h-hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh-----hhcCCCCCcchhh--
Q 004141 597 V-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTTDIPDWCYV-- 668 (771)
Q Consensus 597 ~-~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~-----~~~~~~~~~~~~~-- 668 (771)
. +++.++++.+.+. +.+++.|+||||||.+++.++.++|++++++|+.++...... +........|...
T Consensus 77 ~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T 2ocg_A 77 FERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR 153 (254)
T ss_dssp HHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhH
Confidence 2 2333444444333 346899999999999999999999999999999887532110 0011111111000
Q ss_pred ----hhccCCCCccCCCCCChhh----HHHHhh----cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004141 669 ----ESYGSKGKDSFTESPSVED----LTRFHS----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 669 ----~~~~~~~~~~~~~~~~~~~----~~~~~~----~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
..++.. .+. ..+.. ...+.. ......+.++++|+|+++|++|..+|++.++.+.+.+..
T Consensus 154 ~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---- 224 (254)
T 2ocg_A 154 KPLEALYGYD---YFA--RTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG---- 224 (254)
T ss_dssp HHHHHHHCHH---HHH--HHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----
T ss_pred HHHHHHhcch---hhH--HHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC----
Confidence 000000 000 00000 000000 012335678999999999999999999988888776643
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
.++++++++||.+.. +....+.+.+.+||
T Consensus 225 ~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 225 SRLHLMPEGKHNLHL-RFADEFNKLAEDFL 253 (254)
T ss_dssp CEEEEETTCCTTHHH-HTHHHHHHHHHHHH
T ss_pred CEEEEcCCCCCchhh-hCHHHHHHHHHHHh
Confidence 688999999998653 33456777787776
No 147
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.74 E-value=1.5e-17 Score=169.81 Aligned_cols=210 Identities=17% Similarity=0.169 Sum_probs=136.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.-+|.++++..+.|+ +.|+||++||++.. ...|...+..|+++||.|+++|+||. |.+... .....
T Consensus 10 ~~~g~~l~~~~~g~~------~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~---G~s~~~---~~~~~ 75 (286)
T 3qit_A 10 EFGGNQICLCSWGSP------EHPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFGH---GRSSHL---EMVTS 75 (286)
T ss_dssp EETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC---SSGGG
T ss_pred ecCCceEEEeecCCC------CCCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCCC---CCCCCC---CCCCC
Confidence 446788888777543 35889999998765 44678889999999999999999994 443211 11123
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh---------------c-
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---------------G- 658 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~---------------~- 658 (771)
...+++.+.+..+++. ++.+++.++|||+||.+++.++.++|++++++|+.+|........ .
T Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSS 153 (286)
T ss_dssp CSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhc
Confidence 3466666666666665 345789999999999999999999999999999999875432110 0
Q ss_pred CCC---CCcchhh-hhccCCCCccCCCCCChhhHHHH---------------------------------hhcCcccccC
Q 004141 659 TTD---IPDWCYV-ESYGSKGKDSFTESPSVEDLTRF---------------------------------HSKSPISHIS 701 (771)
Q Consensus 659 ~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~sp~~~~~ 701 (771)
... ....... .... ..... ........+ ...+....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T 3qit_A 154 TPQHPIFPDVATAASRLR----QAIPS-LSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLK 228 (286)
T ss_dssp CCCCCCBSSHHHHHHHHH----HHSTT-SCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHH
T ss_pred cccccccccHHHHHHHhh----cCCcc-cCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHh
Confidence 000 0000000 0000 00000 000000000 1111223356
Q ss_pred CCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004141 702 KVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 702 ~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
++++|+|+++|++|..+|++....+.+.+.. ++++++++ ||.+.
T Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~g-gH~~~ 272 (286)
T 3qit_A 229 SIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ----AKRVFLSG-GHNLH 272 (286)
T ss_dssp HCCSCEEEEEETTCCSSCHHHHHHHHHHSTT----SEEEEESS-SSCHH
T ss_pred ccCCCeEEEEeCCCcccCHHHHHHHHHHCCC----CeEEEeeC-CchHh
Confidence 7899999999999999999888887776643 68999999 99765
No 148
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.74 E-value=2.6e-17 Score=172.67 Aligned_cols=237 Identities=17% Similarity=0.247 Sum_probs=138.7
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
-+|.++++....|.. ...+.+.||++||++.+. ..|...+..|++ .||.|+++|+|| +|.+.... ......
T Consensus 35 ~~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~~--~~w~~~~~~l~~~~~~~Via~D~rG---~G~S~~~~-~~~~~~ 106 (330)
T 3nwo_A 35 FGDHETWVQVTTPEN--AQPHALPLIVLHGGPGMA--HNYVANIAALADETGRTVIHYDQVG---CGNSTHLP-DAPADF 106 (330)
T ss_dssp ETTEEEEEEEECCSS--CCTTCCCEEEECCTTTCC--SGGGGGGGGHHHHHTCCEEEECCTT---STTSCCCT-TSCGGG
T ss_pred ecCcEEEEEEecCcc--CCCCCCcEEEECCCCCCc--hhHHHHHHHhccccCcEEEEECCCC---CCCCCCCC-CCcccc
Confidence 357888877776531 111123588999977653 356666667765 699999999999 55442100 001111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh-----------------
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----------------- 657 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~----------------- 657 (771)
...+++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++........
T Consensus 107 ~~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAA 184 (330)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHH
Confidence 2233443333333333 234689999999999999999999999999999888754321100
Q ss_pred -------cCCCCCcchh-hhhccCCCCccCCCCCChhhHHH-------------------------HhhcCcccccCCCC
Q 004141 658 -------GTTDIPDWCY-VESYGSKGKDSFTESPSVEDLTR-------------------------FHSKSPISHISKVK 704 (771)
Q Consensus 658 -------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~sp~~~~~~i~ 704 (771)
.....+.+.. ...+...........+ ...... +...+....+.+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 263 (330)
T 3nwo_A 185 LDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTP-QDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVT 263 (330)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCC-HHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCC
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHhhccccCCC-HHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCC
Confidence 0000000000 0000000000000001 000000 01112234567889
Q ss_pred CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 705 TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 705 ~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+|+|+++|++|..+| .....+.+.+. ..+++++|++||....+ ...++.+.+.+||+++
T Consensus 264 ~P~Lvi~G~~D~~~p-~~~~~~~~~ip----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 264 APVLVIAGEHDEATP-KTWQPFVDHIP----DVRSHVFPGTSHCTHLE-KPEEFRAVVAQFLHQH 322 (330)
T ss_dssp SCEEEEEETTCSSCH-HHHHHHHHHCS----SEEEEEETTCCTTHHHH-SHHHHHHHHHHHHHHH
T ss_pred CCeEEEeeCCCccCh-HHHHHHHHhCC----CCcEEEeCCCCCchhhc-CHHHHHHHHHHHHHhc
Confidence 999999999999876 45555555443 48999999999976644 4557888999999875
No 149
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.73 E-value=4.7e-18 Score=173.00 Aligned_cols=213 Identities=14% Similarity=0.153 Sum_probs=133.4
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||++... ..|...+..|++ ||.|+++|+|| +|.+.. .........+++.+.+..+++. ++.+
T Consensus 23 ~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G---~G~s~~---~~~~~~~~~~~~~~~~~~~~~~--l~~~ 91 (278)
T 3oos_A 23 GPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKG---CGNSDS---AKNDSEYSMTETIKDLEAIREA--LYIN 91 (278)
T ss_dssp SSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTT---STTSCC---CSSGGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCC---CCCCCC---CCCcccCcHHHHHHHHHHHHHH--hCCC
Confidence 47899999977653 346666677766 99999999999 444321 1111223466666666666665 3456
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCC-----Ccch----hhhhccCC-------------
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-----PDWC----YVESYGSK------------- 674 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~-----~~~~----~~~~~~~~------------- 674 (771)
++.|+|||+||.+++.++.++|++++++|+.+|............. .... ....+...
T Consensus 92 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (278)
T 3oos_A 92 KWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSRE 171 (278)
T ss_dssp CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred eEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHH
Confidence 8999999999999999999999999999999998762111100000 0000 00000000
Q ss_pred ----------CCccCCCCCC-----hhhHHHH-----hhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004141 675 ----------GKDSFTESPS-----VEDLTRF-----HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 675 ----------~~~~~~~~~~-----~~~~~~~-----~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
....+...+. ......+ ...+....+.++++|+|+++|++|..+|++.++.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 248 (278)
T 3oos_A 172 WALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP--- 248 (278)
T ss_dssp HHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST---
T ss_pred HhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCC---
Confidence 0000000000 0111111 1223344567899999999999999999998888887764
Q ss_pred CCEEEEEeCCCCccCCCCCChHHHHHHHHHH
Q 004141 735 VETKVIVFPNDVHGIERPQSDFESFLNIGLW 765 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 765 (771)
++++++++++||.+... ...++.+.+.+|
T Consensus 249 -~~~~~~~~~~gH~~~~~-~p~~~~~~i~~f 277 (278)
T 3oos_A 249 -NATLTKFEESNHNPFVE-EIDKFNQFVNDT 277 (278)
T ss_dssp -TEEEEEETTCSSCHHHH-SHHHHHHHHHHT
T ss_pred -CcEEEEcCCcCCCcccc-cHHHHHHHHHhh
Confidence 37999999999986533 333555555555
No 150
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.73 E-value=7.8e-18 Score=180.54 Aligned_cols=140 Identities=10% Similarity=0.031 Sum_probs=102.3
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------CCcch----HHHHHHHHCCcEEEEECCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~------------~~~~~----~~~~~la~~G~~Vv~~d~r 575 (771)
.+...+|.++.++++.|++. .++.|+||++||.+.... ...|. ..++.|+++||+|+++|+|
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 44556788999999999742 567899999999654321 00112 5678999999999999999
Q ss_pred CCCCCChhhhhcC----------------CCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC
Q 004141 576 GSLGFGEEALQSL----------------PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 576 G~~~~g~~~~~~~----------------~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
|.++.+....... ...+....+.|+.+++++|.+++.+|++||+|+||||||++++.++.. ++
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DK 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CC
Confidence 9554432211000 001111223789999999999888999999999999999999998886 56
Q ss_pred ceeEEEecCCccchh
Q 004141 640 KFVAAAARNPLCNLA 654 (771)
Q Consensus 640 ~~~~~v~~~p~~~~~ 654 (771)
+++++|+.+++..+.
T Consensus 248 ~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 248 DIYAFVYNDFLCQTQ 262 (391)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred ceeEEEEccCCCCcc
Confidence 789999888877653
No 151
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.73 E-value=2.8e-17 Score=168.67 Aligned_cols=232 Identities=16% Similarity=0.160 Sum_probs=137.2
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|..+++...-+ ...|+||++||.+ +......|...+..|++. |.|+++|+|| +|.+..... ..
T Consensus 14 ~~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~~----~~ 79 (285)
T 1c4x_A 14 SGTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIG---FGQSEYPET----YP 79 (285)
T ss_dssp CTTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTT---STTSCCCSS----CC
T ss_pred ECCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCC---CCCCCCCCC----cc
Confidence 3566776554321 2346799999964 222233566667777654 9999999999 554422110 01
Q ss_pred cchhhH----HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh--------hhhcCCCC
Q 004141 595 QDVNDV----LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA--------LMVGTTDI 662 (771)
Q Consensus 595 ~~~~D~----~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~--------~~~~~~~~ 662 (771)
..++++ .+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.+|..... .+......
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 157 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYAD 157 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGS
T ss_pred cchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcc
Confidence 234454 4444444443 234689999999999999999999999999999998754210 00000000
Q ss_pred CcchhhhhccCCCCccCCCC--C------------ChhhHHHHhh------------cCcccccCCCCCcEEEEeeCCCC
Q 004141 663 PDWCYVESYGSKGKDSFTES--P------------SVEDLTRFHS------------KSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~------------~sp~~~~~~i~~P~lii~G~~D~ 716 (771)
+.......+........... . .......+.. ......+.++++|+|+++|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 237 (285)
T 1c4x_A 158 PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 237 (285)
T ss_dssp CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCe
Confidence 00000000000000000000 0 0000000000 01223467889999999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
.+|++.++.+++.+. +.++++++++||..... ...++.+.+.+||++
T Consensus 238 ~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 238 IVPLDTSLYLTKHLK----HAELVVLDRCGHWAQLE-RWDAMGPMLMEHFRA 284 (285)
T ss_dssp SSCTHHHHHHHHHCS----SEEEEEESSCCSCHHHH-SHHHHHHHHHHHHHC
T ss_pred eeCHHHHHHHHHhCC----CceEEEeCCCCcchhhc-CHHHHHHHHHHHHhc
Confidence 999998888777654 47999999999976543 355778888899864
No 152
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.73 E-value=2.3e-17 Score=158.57 Aligned_cols=181 Identities=14% Similarity=0.061 Sum_probs=124.2
Q ss_pred CCcEEEEEcCCCCCCC-CCcchH-HHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 536 CDPLIVVLHGGPHSVS-LSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~-~~~~~~-~~~~la~~-G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
+.|+||++||++.... ...|.. .+..|+++ ||.|+++|+||... .++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 4689999999876532 234555 67788777 99999999998311 123444555555422
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHh
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 692 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (771)
. .++++|+||||||.+++.++.++| ++++|+.+|...... .. ..... .+...+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~--------~~--~~~~~-----~~~~~~~-------- 118 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG--------DE--NERAS-----GYFTRPW-------- 118 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTT--------CH--HHHHT-----STTSSCC--------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccc--------hh--hhHHH-----hhhcccc--------
Confidence 2 278999999999999999999998 999999988753210 00 00000 0000010
Q ss_pred hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 693 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 693 ~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
....+..+.+|+|+++|++|..+|++.++.+.+.+ . .+++++++++|.+... . .+.+..+++||++..
T Consensus 119 ---~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~-~-p~~~~~~~~fl~~~~ 186 (194)
T 2qs9_A 119 ---QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNTE-F-HELITVVKSLLKVPA 186 (194)
T ss_dssp ---CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSSC-C-HHHHHHHHHHHTCCC
T ss_pred ---cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccchh-C-HHHHHHHHHHHHhhh
Confidence 11122334679999999999999999999998888 3 5889999999987643 3 356777889997643
No 153
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.73 E-value=1.4e-17 Score=170.61 Aligned_cols=227 Identities=16% Similarity=0.192 Sum_probs=137.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|..+++... + ..|.||++||.+.... ...|...+..| +.+|.|+++|+|| +|.+.... . ...
T Consensus 13 ~g~~l~y~~~------G--~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~~---~-~~~ 76 (282)
T 1iup_A 13 AGVLTNYHDV------G--EGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVG---FGFTDRPE---N-YNY 76 (282)
T ss_dssp TTEEEEEEEE------C--CSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTT---STTSCCCT---T-CCC
T ss_pred CCEEEEEEec------C--CCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCC---CCCCCCCC---C-CCC
Confidence 4666765443 1 2367999999543221 12455556666 6789999999999 55543211 0 122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh-------hhhcCCCCCcchhh
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-------LMVGTTDIPDWCYV 668 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~-------~~~~~~~~~~~~~~ 668 (771)
.++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.+|..... ..... .+.....
T Consensus 77 ~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 152 (282)
T 1iup_A 77 SKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY--TPSIENM 152 (282)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC--CSCHHHH
T ss_pred CHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC--CCcHHHH
Confidence 455555555555554 245689999999999999999999999999999988754210 00000 0000000
Q ss_pred ----hhccCCC--C-----c-cC--CCCCCh-hhHHHHhh----------cCcccccCCCCCcEEEEeeCCCCccCcHHH
Q 004141 669 ----ESYGSKG--K-----D-SF--TESPSV-EDLTRFHS----------KSPISHISKVKTPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 669 ----~~~~~~~--~-----~-~~--~~~~~~-~~~~~~~~----------~sp~~~~~~i~~P~lii~G~~D~~vp~~~~ 723 (771)
..+.... . . .+ ...+.. .....+.. ..+...+.++++|+|+++|++|..+|++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~ 232 (282)
T 1iup_A 153 RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSS 232 (282)
T ss_dssp HHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred HHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 0000000 0 0 00 000000 00000000 001145678999999999999999999988
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+++.+.+.. .++++++++||..... ...++.+.+.+||++
T Consensus 233 ~~~~~~~~~----~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 233 LRLGELIDR----AQLHVFGRCGHWTQIE-QTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHHHCTT----EEEEEESSCCSCHHHH-SHHHHHHHHHHHHHT
T ss_pred HHHHHhCCC----CeEEEECCCCCCcccc-CHHHHHHHHHHHHhc
Confidence 887776643 7999999999986543 355788889999875
No 154
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.73 E-value=1.9e-17 Score=167.66 Aligned_cols=220 Identities=12% Similarity=0.051 Sum_probs=137.3
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.. ...|...+..|++ ||.|+++|+||. |.+...... .......+++.+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G~---G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVCA---GSVNPDFFD-FRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTTS---TTSCGGGCC-TTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCCC---CCCCCCCCC-ccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999997655 3456667777877 999999999994 444221111 11122456666666666555 345
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCC-Cc--c-hhhhhccCC-------CCccCCCCCC
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-PD--W-CYVESYGSK-------GKDSFTESPS 684 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~-~~--~-~~~~~~~~~-------~~~~~~~~~~ 684 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|............. .. . ......... ..........
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 68999999999999999999999999999999986432110000000 00 0 000000000 0000000000
Q ss_pred hh-------------------hHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004141 685 VE-------------------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 685 ~~-------------------~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
.. ....+...+....+.++++|+|+++|++|..+|++.++.+.+.+.. .+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 246 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG---KNTVHWLNIE 246 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS---CEEEEEEEEE
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC---CceEEEeCCC
Confidence 00 0111122344456778899999999999999999988888777643 2789999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHH
Q 004141 746 VHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+|.+.. +...++.+.+.+||++
T Consensus 247 gH~~~~-~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 247 GHLPHL-SAPTLLAQELRRALSH 268 (269)
T ss_dssp SSCHHH-HCHHHHHHHHHHHHC-
T ss_pred CCCccc-cCHHHHHHHHHHHHhh
Confidence 998654 3455777888888865
No 155
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=7.5e-18 Score=171.60 Aligned_cols=217 Identities=15% Similarity=0.115 Sum_probs=141.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHH-HHCC---cEEEEECCCCCCCCChhhh--hcCCC
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFL-SSVG---YSLLIVNYRGSLGFGEEAL--QSLPG 590 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~l-a~~G---~~Vv~~d~rG~~~~g~~~~--~~~~~ 590 (771)
.|.++..++|.|+++.+.+++|+|+++||++.......+......+ ++.| +.|+.+|+++...++...+ ...+.
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 5788999999999887678899999999975311011111122222 3467 9999999997543321110 00000
Q ss_pred ----------------Ccc-ccchhhHH--HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 591 ----------------KVG-SQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 591 ----------------~~~-~~~~~D~~--~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
..+ .....+.+ +.+.++.++..+|+++++|+||||||++++.++.++|+.|+++++.+|..
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 011 01222222 23445555555788999999999999999999999999999999999986
Q ss_pred chhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHH-
Q 004141 652 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL- 730 (771)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l- 730 (771)
.+... .+.. ..+.+.... ......+|++++||+.|..++..++++++++|
T Consensus 188 ~~~~~-------------~~~~-------------~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~ 238 (275)
T 2qm0_A 188 WWNNK-------------SVLE-------------KEENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANELSERLL 238 (275)
T ss_dssp THHHH-------------GGGG-------------GTTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred eeChH-------------HHHH-------------HHHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHHHHHHHH
Confidence 32210 0000 000010000 02345689999999999999999999999999
Q ss_pred --HhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 731 --REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 731 --~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
+..|+++++.++|+++|+.. ....+...+.||
T Consensus 239 ~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 239 QVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 55788999999999999643 233445566665
No 156
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.73 E-value=1.3e-17 Score=170.41 Aligned_cols=213 Identities=17% Similarity=0.239 Sum_probs=129.3
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
+.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... .....+++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRG---FGGSSKVN-----TGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCC---CCCCCCCC-----CCCCHHHHHHHHHHHHHh--cCCCc
Confidence 459999997665 4468888899999999999999999 55442211 112344444444444433 23468
Q ss_pred EEEEEcChhHHHHHHHHhhCCC-ceeEEEecCCccchhhhhcC-C-CCCcchh--------------hhhccCCCCcc--
Q 004141 618 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGT-T-DIPDWCY--------------VESYGSKGKDS-- 678 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~p~~~~~~~~~~-~-~~~~~~~--------------~~~~~~~~~~~-- 678 (771)
+.|+||||||.+++.++.++|+ +++++|+.++.......... . ..+.... ...+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDE 171 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhccc
Confidence 9999999999999999999998 99999998874321100000 0 0000000 00000000000
Q ss_pred -CCCCCChhhHHHH------------------hhcCcccccCCC---CCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCC
Q 004141 679 -FTESPSVEDLTRF------------------HSKSPISHISKV---KTPTIFLLGAQDLRVPVSNG-LQYARALREKGV 735 (771)
Q Consensus 679 -~~~~~~~~~~~~~------------------~~~sp~~~~~~i---~~P~lii~G~~D~~vp~~~~-~~~~~~l~~~g~ 735 (771)
.......+....+ ...+....+.++ ++|+|+++|++|..+|++.+ +.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~---- 247 (279)
T 1hkh_A 172 NLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP---- 247 (279)
T ss_dssp HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT----
T ss_pred CCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCC----
Confidence 0000000000000 011112235567 89999999999999998877 66666553
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
+.+++++++++|.+... ...++.+.+.+||+
T Consensus 248 ~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 248 EADYVEVEGAPHGLLWT-HADEVNAALKTFLA 278 (279)
T ss_dssp TSEEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred CeeEEEeCCCCccchhc-CHHHHHHHHHHHhh
Confidence 37899999999987533 45577888888885
No 157
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.73 E-value=2.9e-17 Score=167.54 Aligned_cols=219 Identities=12% Similarity=0.150 Sum_probs=138.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||.+.. ...|...+..|++ ||.|+++|+||.+. +...... .......+++.+.+..+++. ++.+
T Consensus 28 ~~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G~G~---s~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~ 98 (282)
T 3qvm_A 28 EKTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVGSGQ---SDLESFS-TKRYSSLEGYAKDVEEILVA--LDLV 98 (282)
T ss_dssp SCEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTTSTT---SCGGGCC-TTGGGSHHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCCCCC---CCCCCCC-ccccccHHHHHHHHHHHHHH--cCCC
Confidence 3899999997665 3467777888877 99999999999544 3221110 01112456666666666655 2457
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcC-C-CCC----------------cch--hhh-hccCCC
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-T-DIP----------------DWC--YVE-SYGSKG 675 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~-~-~~~----------------~~~--~~~-~~~~~~ 675 (771)
+++|+|||+||.+++.++.++|++++++|+.+|.......... . ... .|. +.. .+....
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 8999999999999999999999999999999987532211000 0 000 000 000 000000
Q ss_pred C--------ccCCCCCChh----hHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC
Q 004141 676 K--------DSFTESPSVE----DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 743 (771)
Q Consensus 676 ~--------~~~~~~~~~~----~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 743 (771)
. ..+.. .... ........+....+.++++|+|+++|++|..+|++.+..+.+.+. ..++++++
T Consensus 179 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~ 253 (282)
T 3qvm_A 179 SSELIGELSGSFCT-TDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP----NSQLELIQ 253 (282)
T ss_dssp CHHHHHHHHHHHHH-SCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS----SEEEEEEE
T ss_pred chhhHHHHHHHHhc-CCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC----CCcEEEec
Confidence 0 00000 0000 001111223335577889999999999999999998888877764 37999999
Q ss_pred CCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 744 NDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 744 ~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++|.+... ...++.+.+.+||++..
T Consensus 254 ~~gH~~~~~-~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 254 AEGHCLHMT-DAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp EESSCHHHH-CHHHHHHHHHHHHHHC-
T ss_pred CCCCccccc-CHHHHHHHHHHHHHhcC
Confidence 999986543 35678889999998753
No 158
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.72 E-value=2.4e-17 Score=169.60 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=137.9
Q ss_pred CC-ceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 517 AQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+| ..+++...- .++.|.||++||.+ +......|...+..|++. |.|+++|+|| +|.+.... . ..
T Consensus 21 ~g~~~l~y~~~G------~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~~---~-~~ 86 (291)
T 2wue_A 21 DGPLKLHYHEAG------VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPG---YGHSDKRA---E-HG 86 (291)
T ss_dssp SSEEEEEEEEEC------TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTT---STTSCCCS---C-CS
T ss_pred CCcEEEEEEecC------CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCC---CCCCCCCC---C-CC
Confidence 56 677655442 22346899999964 222233566667777655 9999999999 55543211 1 12
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh------------hhcCCCC
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL------------MVGTTDI 662 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~------------~~~~~~~ 662 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.+|...... +......
T Consensus 87 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 3455555555555444 2346899999999999999999999999999999987542100 0000000
Q ss_pred CcchhhhhccCCCCccCCCC------------CChhhHHHHhh-----cC-----cc--cccCCCCCcEEEEeeCCCCcc
Q 004141 663 PDWCYVESYGSKGKDSFTES------------PSVEDLTRFHS-----KS-----PI--SHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-----~s-----p~--~~~~~i~~P~lii~G~~D~~v 718 (771)
+.+.....+........... ........+.. .. .. ..+.++++|+|+++|++|..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 244 (291)
T 2wue_A 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVN 244 (291)
T ss_dssp CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSS
T ss_pred CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCC
Confidence 00000000000000000000 00000000000 00 11 456788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
|++.++.+.+.+. ..++++++++||..... ....+.+.+.+||++
T Consensus 245 ~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 245 PLDGALVALKTIP----RAQLHVFGQCGHWVQVE-KFDEFNKLTIEFLGG 289 (291)
T ss_dssp CGGGGHHHHHHST----TEEEEEESSCCSCHHHH-THHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCC----CCeEEEeCCCCCChhhh-CHHHHHHHHHHHHhc
Confidence 9998888777664 37999999999976533 345777888888753
No 159
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.72 E-value=2e-17 Score=177.22 Aligned_cols=192 Identities=18% Similarity=0.130 Sum_probs=132.1
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhh------hcCCCCc-------cc-----
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL------QSLPGKV-------GS----- 594 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~------~~~~~~~-------~~----- 594 (771)
..++.|+||++||++.. ...|...++.|+++||.|+++|+||.+....... ......+ +.
T Consensus 94 ~~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 171 (383)
T 3d59_A 94 PGEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHI 171 (383)
T ss_dssp CSSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHH
T ss_pred cCCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhh
Confidence 34578999999998765 3467888999999999999999998543211000 0000000 10
Q ss_pred ------cchhhHHHHHHHHHH--------------------cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecC
Q 004141 595 ------QDVNDVLTAIDHVID--------------------MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 648 (771)
Q Consensus 595 ------~~~~D~~~~i~~l~~--------------------~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 648 (771)
...+|+..+++++.+ ...+|.+||+++|||+||.+++.++.+.+ +++++|+.+
T Consensus 172 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~ 250 (383)
T 3d59_A 172 RNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeC
Confidence 114688888888875 34467889999999999999999988755 699999887
Q ss_pred CccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHH
Q 004141 649 PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 728 (771)
Q Consensus 649 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~ 728 (771)
|... +.. ...+.++++|+|++||++|..+ .. .+..+
T Consensus 251 ~~~~------------------------------p~~-----------~~~~~~i~~P~Lii~g~~D~~~--~~-~~~~~ 286 (383)
T 3d59_A 251 AWMF------------------------------PLG-----------DEVYSRIPQPLFFINSEYFQYP--AN-IIKMK 286 (383)
T ss_dssp CCCT------------------------------TCC-----------GGGGGSCCSCEEEEEETTTCCH--HH-HHHHH
T ss_pred CccC------------------------------CCc-----------hhhhccCCCCEEEEecccccch--hh-HHHHH
Confidence 7421 000 0113567899999999999854 22 23335
Q ss_pred HHHhCCCCEEEEEeCCCCccCCC------------------CCCh----HHHHHHHHHHHHHhhC
Q 004141 729 ALREKGVETKVIVFPNDVHGIER------------------PQSD----FESFLNIGLWFKKYCK 771 (771)
Q Consensus 729 ~l~~~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~fl~~~L~ 771 (771)
.+...+.+.+++++++++|.+.. .... ..+...+++||+++|+
T Consensus 287 ~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 287 KCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp TTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 56666778999999999998631 1112 2233469999999985
No 160
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.72 E-value=1.8e-17 Score=166.99 Aligned_cols=215 Identities=16% Similarity=0.129 Sum_probs=128.1
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... . ...++++.+.+..+++. ++.
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~---~---~~~~~~~a~dl~~~l~~--l~~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRN---HGLSPRE---P---VMNYPAMAQDLVDTLDA--LQI 80 (255)
T ss_dssp CCCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTT---STTSCCC---S---CCCHHHHHHHHHHHHHH--HTC
T ss_pred CCCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCC---CCCCCCC---C---CcCHHHHHHHHHHHHHH--cCC
Confidence 34779999997765 44688888888665 9999999999 5554321 1 12233443333333333 134
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc--cch----hh----hhc--CCCCCcchh-hhhccCCCC------
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL--CNL----AL----MVG--TTDIPDWCY-VESYGSKGK------ 676 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~--~~~----~~----~~~--~~~~~~~~~-~~~~~~~~~------ 676 (771)
+++.|+||||||.+++.++.++|++++++|+.++. ... .. +.. ......... ...+.....
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 68999999999999999999999999999986532 110 00 000 000000000 000000000
Q ss_pred ---ccCC---CCCChhhHH-HHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004141 677 ---DSFT---ESPSVEDLT-RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 677 ---~~~~---~~~~~~~~~-~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
..+. ......... .+........+.++++|+|+++|++|..++++.++.+.+.+. ..++++++++||.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~ 236 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP----QARAHVIAGAGHWV 236 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT----TEEECCBTTCCSCH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC----CCeEEEeCCCCCcc
Confidence 0000 000000000 000000012256789999999999999999988877766554 38999999999986
Q ss_pred CCCCChHHHHHHHHHHHHHh
Q 004141 750 ERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~fl~~~ 769 (771)
.... ...+.+.+.+|+++|
T Consensus 237 ~~e~-p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 237 HAEK-PDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHHC-HHHHHHHHHHHHHTC
T ss_pred ccCC-HHHHHHHHHHHHhcC
Confidence 5433 457888999999764
No 161
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.72 E-value=2.2e-17 Score=171.57 Aligned_cols=230 Identities=16% Similarity=0.176 Sum_probs=139.2
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
..+++...-|. ...|.||++||++.+ ...|...+..|++.||.|+++|+|| ||.+.... ......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~~---~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTW--SYLYRKMIPVFAESGARVIAPDFFG---FGKSDKPV---DEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEES---CGGGCCHH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCeEEEeCCCC---CCCCCCCC---CcCCcCHH
Confidence 77876665442 114789999998765 3467788889999999999999999 55553211 11123345
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccc--hhh---hh---cCCCC--Ccchhh
Q 004141 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN--LAL---MV---GTTDI--PDWCYV 668 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~--~~~---~~---~~~~~--~~~~~~ 668 (771)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... ... +. ..... ..|...
T Consensus 101 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 101 FHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHH
Confidence 555555444444 2346899999999999999999999999999999887431 000 00 00000 000000
Q ss_pred hhccC------------CCC-----ccCC-CCCChh---hHHHHhh--cC-----------cccccC-CCCCcEEEEeeC
Q 004141 669 ESYGS------------KGK-----DSFT-ESPSVE---DLTRFHS--KS-----------PISHIS-KVKTPTIFLLGA 713 (771)
Q Consensus 669 ~~~~~------------~~~-----~~~~-~~~~~~---~~~~~~~--~s-----------p~~~~~-~i~~P~lii~G~ 713 (771)
..... ... ..+. ...... ....+.. .. ....+. ++++|+|+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~ 258 (310)
T 1b6g_A 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEecc
Confidence 00000 000 0000 000000 0000000 00 112355 899999999999
Q ss_pred CCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 714 QDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 714 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+|..+| +.++.+.+.+... ....++++++||.... ...++.+.+.+||++
T Consensus 259 ~D~~~~-~~~~~~~~~ip~~--~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 259 KDKLLG-PDVMYPMKALING--CPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp TCSSSS-HHHHHHHHHHSTT--CCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred Ccchhh-hHHHHHHHhcccc--cceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 999999 8888887777542 2333334999998775 556888999999975
No 162
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.72 E-value=9.7e-17 Score=172.84 Aligned_cols=131 Identities=17% Similarity=0.117 Sum_probs=91.3
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC---------CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---------SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~---------~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
..+.++++.|.+..+.++.|+||++||+++.... ..+...+..|+++||.|+++|+||.+..+.. .
T Consensus 61 ~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~-----~ 135 (397)
T 3h2g_A 61 ATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYA-----Y 135 (397)
T ss_dssp EEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCS-----S
T ss_pred EEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCC-----c
Confidence 5689999999875556789999999997765432 1256678888999999999999995543211 1
Q ss_pred CCcc-----ccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHhh-CC----C-ceeEEEecCCccchh
Q 004141 590 GKVG-----SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ-AP----D-KFVAAAARNPLCNLA 654 (771)
Q Consensus 590 ~~~~-----~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~-~p----~-~~~~~v~~~p~~~~~ 654 (771)
..+. ..++.|...++..+.++ +..++++|+|+||||||++++.++.. .+ + .+.+++..++..++.
T Consensus 136 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (397)
T 3h2g_A 136 HPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALE 212 (397)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHH
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHH
Confidence 1111 12345555565555554 33346899999999999999887632 22 1 577888888877764
No 163
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.72 E-value=2.8e-17 Score=163.82 Aligned_cols=207 Identities=13% Similarity=0.217 Sum_probs=128.8
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHH------H
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI------D 609 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~------~ 609 (771)
+.|+||++||.+... ..|. .+..|+ +||.|+++|+||. |.+. .......+++.+.+..++ +
T Consensus 15 ~~~~vv~~hG~~~~~--~~~~-~~~~l~-~g~~v~~~d~~g~---g~s~------~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNL--KIFG-ELEKYL-EDYNCILLDLKGH---GESK------GQCPSTVYGYIDNVANFITNSEVTK 81 (245)
T ss_dssp CSCEEEEECCTTCCG--GGGT-TGGGGC-TTSEEEEECCTTS---TTCC------SCCCSSHHHHHHHHHHHHHHCTTTT
T ss_pred CCCEEEEEeCCcccH--HHHH-HHHHHH-hCCEEEEecCCCC---CCCC------CCCCcCHHHHHHHHHHHHHhhhhHh
Confidence 468999999977653 3455 555564 8999999999994 4332 111223555555555555 3
Q ss_pred cCCCCCCeEEEEEcChhHHHHHHHHhh-CCCceeEEEecCCccchhhhh-------cCCCCCcchhhhhccCC-------
Q 004141 610 MGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-------GTTDIPDWCYVESYGSK------- 674 (771)
Q Consensus 610 ~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~~~v~~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~------- 674 (771)
. ++ +++|+|||+||.+++.++.+ +|+ ++++|+.+|........ .......+.........
T Consensus 82 ~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (245)
T 3e0x_A 82 H--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEK 156 (245)
T ss_dssp T--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHH
T ss_pred h--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHH
Confidence 3 33 89999999999999999999 999 99999999876541100 00000000000000000
Q ss_pred CCccCCCCCC--hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC
Q 004141 675 GKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 752 (771)
Q Consensus 675 ~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 752 (771)
....+...+. ..........+....+.++++|+|+++|++|..+|++.++.+.+.+. +++++++++++|.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~ 232 (245)
T 3e0x_A 157 YFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE----NSELKIFETGKHFLLVV 232 (245)
T ss_dssp HHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEESSCGGGHHHH
T ss_pred HHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CceEEEeCCCCcceEEe
Confidence 0000000000 01111222344555678899999999999999999998888877764 37999999999986532
Q ss_pred CChHHHHHHHHHH
Q 004141 753 QSDFESFLNIGLW 765 (771)
Q Consensus 753 ~~~~~~~~~i~~f 765 (771)
...++.+.+.+|
T Consensus 233 -~~~~~~~~i~~f 244 (245)
T 3e0x_A 233 -NAKGVAEEIKNF 244 (245)
T ss_dssp -THHHHHHHHHTT
T ss_pred -cHHHHHHHHHhh
Confidence 333455555555
No 164
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.71 E-value=6.4e-17 Score=166.40 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=136.2
Q ss_pred CCcEEEEEcCCCCCCCCCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
..|+||++||.+.. ...|. ..+..|++.||.|+++|+|| +|.+... . ....+++.+.+..+++. ++
T Consensus 42 ~~~~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~s~~~---~---~~~~~~~~~~~~~~l~~--l~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGA--GRTWHPHQVPAFLAAGYRCITFDNRG---IGATENA---E---GFTTQTMVADTAALIET--LD 108 (293)
T ss_dssp SSEEEEEECCTTCC--GGGGTTTTHHHHHHTTEEEEEECCTT---SGGGTTC---C---SCCHHHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCCCc--hhhcchhhhhhHhhcCCeEEEEccCC---CCCCCCc---c---cCCHHHHHHHHHHHHHh--cC
Confidence 45889999997765 33565 56778889999999999999 5554321 1 12355555555554444 24
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc------------CCCCC-cchh----hhhccCCC--
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDIP-DWCY----VESYGSKG-- 675 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~------------~~~~~-~~~~----~~~~~~~~-- 675 (771)
.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....+ .+.. ...+....
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 46899999999999999999999999999999998753211100 00000 0000 00000000
Q ss_pred -----------CccCCCCCChhhHH---HHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 676 -----------KDSFTESPSVEDLT---RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 676 -----------~~~~~~~~~~~~~~---~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
.............. .....+....+.++++|+|+++|++|..+|++.++.+.+.+.. +++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 264 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPN----GRYLQ 264 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----EEEEE
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC----ceEEE
Confidence 00000000000000 0111222345678899999999999999999988888777643 79999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 742 FPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
++++||.+.. +...++.+.+.+||++
T Consensus 265 ~~~~gH~~~~-~~p~~~~~~i~~fl~~ 290 (293)
T 3hss_A 265 IPDAGHLGFF-ERPEAVNTAMLKFFAS 290 (293)
T ss_dssp ETTCCTTHHH-HSHHHHHHHHHHHHHT
T ss_pred eCCCcchHhh-hCHHHHHHHHHHHHHh
Confidence 9999998653 3445778889999875
No 165
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.71 E-value=1e-16 Score=165.76 Aligned_cols=234 Identities=12% Similarity=0.161 Sum_probs=135.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++.... ..|+||++||.+.+ ...|...+..|++ ||.|+++|+|| +|.+...........
T Consensus 19 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G---~G~S~~~~~~~~~~~ 84 (306)
T 3r40_A 19 NTSSGRIFARVGG--------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPG---YGWSDMPESDEQHTP 84 (306)
T ss_dssp CCTTCCEEEEEEE--------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTT---STTSCCCCCCTTCGG
T ss_pred EeCCEEEEEEEcC--------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCC---CCCCCCCCCCcccCC
Confidence 3467778765542 34789999998765 3467778888877 99999999999 444432111111113
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCC--------------
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------------- 660 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~-------------- 660 (771)
...+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|...........
T Consensus 85 ~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
T 3r40_A 85 YTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLA 162 (306)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHT
T ss_pred CCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhh
Confidence 3466666666666665 345689999999999999999999999999999999754321110000
Q ss_pred CC---C-------cchhhhhccCCCCcc-CCCCCChhhHHHHhh--cCc------------------------ccccCCC
Q 004141 661 DI---P-------DWCYVESYGSKGKDS-FTESPSVEDLTRFHS--KSP------------------------ISHISKV 703 (771)
Q Consensus 661 ~~---~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~sp------------------------~~~~~~i 703 (771)
.. . ...+...+....... .......+....+.. ..+ ...+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (306)
T 3r40_A 163 QPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKI 242 (306)
T ss_dssp SCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCB
T ss_pred cccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCC
Confidence 00 0 000000000000000 000011111111110 000 0135788
Q ss_pred CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 704 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 704 ~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
++|+|+++|++|..+|.....+.++.+. .++++.++ ++||.+.. +...++.+.|.+||++.
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWA---SDVQGAPI-ESGHFLPE-EAPDQTAEALVRFFSAA 303 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHB---SSEEEEEE-SSCSCHHH-HSHHHHHHHHHHHHHC-
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhc---CCCeEEEe-cCCcCchh-hChHHHHHHHHHHHHhc
Confidence 9999999999999998555444444432 34777788 78997653 34557888999999764
No 166
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.71 E-value=6.7e-17 Score=166.16 Aligned_cols=215 Identities=14% Similarity=0.204 Sum_probs=130.2
Q ss_pred cEEEEEcCCCC-CCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 538 PLIVVLHGGPH-SVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 538 p~vv~~HGg~~-~~~~~~~~~~~-~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
|+||++||.+. ......|...+ ..|++ +|.|+++|+|| +|.+.... ......+++.+.+..+++. ++.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~----~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPG---WGKSDSVV----NSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTT---STTSCCCC----CSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCC---CCCCCCCC----ccccCHHHHHHHHHHHHHH--hCC
Confidence 38999999642 12223455556 66655 59999999999 55442211 1123466666666666655 345
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC------------CCcchhhhhccCCCCccCCCCC
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSKGKDSFTESP 683 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 683 (771)
+++.|+||||||.+++.++.++|++++++|+.+|............ .+.+.....+............
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 7899999999999999999999999999999887542100000000 0000000000000000000000
Q ss_pred C-------------hhhHHHHh---------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 684 S-------------VEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 684 ~-------------~~~~~~~~---------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
. ......+. .......+.++++|+|+++|++|..+|++.++.+.+.+.. .++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~ 262 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG----SELHI 262 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTT----CEEEE
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCC----cEEEE
Confidence 0 00000000 0112245678899999999999999999998888777643 68999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 742 FPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
++++||..... ....+.+.+.+||+
T Consensus 263 i~~~gH~~~~e-~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 263 FRDCGHWAQWE-HADAFNQLVLNFLA 287 (289)
T ss_dssp ESSCCSCHHHH-THHHHHHHHHHHHT
T ss_pred eCCCCCchhhc-CHHHHHHHHHHHhc
Confidence 99999976543 34567788888875
No 167
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.71 E-value=5.9e-17 Score=167.21 Aligned_cols=229 Identities=17% Similarity=0.153 Sum_probs=137.2
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
..+++...-|. ...|.||++||.+.+ ...|...+..|++.||.|+++|+|| ||.+.... ......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~~---~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFG---FGRSDKPT---DDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEES---CGGGCCHH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCC---CCCCCCCC---CcccCCHH
Confidence 77876665432 114789999997765 4467778889999999999999999 55543211 11122345
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh-----------hhc-CCCCCcch
Q 004141 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----------MVG-TTDIPDWC 666 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~-----------~~~-~~~~~~~~ 666 (771)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++...... ... ........
T Consensus 100 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2xt0_A 100 FHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGK 177 (297)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHH
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhH
Confidence 555544444444 2346899999999999999999999999999999887431000 000 00000000
Q ss_pred hhhhccCCC----CccCC-CCCCh---hhHHHHhhc--------------CcccccC-CCCCcEEEEeeCCCCccCcHHH
Q 004141 667 YVESYGSKG----KDSFT-ESPSV---EDLTRFHSK--------------SPISHIS-KVKTPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 667 ~~~~~~~~~----~~~~~-~~~~~---~~~~~~~~~--------------sp~~~~~-~i~~P~lii~G~~D~~vp~~~~ 723 (771)
......... ...+. ..... .....+... .....+. ++++|+|+++|++|..+| +.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 256 (297)
T 2xt0_A 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEV 256 (297)
T ss_dssp HHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHH
T ss_pred HHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHH
Confidence 000000000 00000 00000 000011000 0112356 899999999999999999 778
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
+++.+.+... ....+.++++||.... ...++...+.+||+
T Consensus 257 ~~~~~~~p~~--~~~~~~~~~~GH~~~~--~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 257 MGMLRQAIRG--CPEPMIVEAGGHFVQE--HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHSTT--CCCCEEETTCCSSGGG--GCHHHHHHHHHHTT
T ss_pred HHHHHhCCCC--eeEEeccCCCCcCccc--CHHHHHHHHHHHHh
Confidence 8887776542 3344457999998775 45578888888874
No 168
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.71 E-value=7.5e-17 Score=154.70 Aligned_cols=164 Identities=15% Similarity=0.138 Sum_probs=115.2
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHH-HHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~-~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
.|+||++||.+.+.. ..|...+. .|+++||.|+++|+|.+.. + ..+++.+.+..+++. . .
T Consensus 4 ~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------~------~~~~~~~~~~~~~~~--~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------P------RLEDWLDTLSLYQHT--L-H 64 (192)
T ss_dssp CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------C------CHHHHHHHHHTTGGG--C-C
T ss_pred CCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------C------CHHHHHHHHHHHHHh--c-c
Confidence 478999999776532 14666664 6888999999999993211 1 345555555544444 2 5
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCC--ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhh
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 693 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~--~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (771)
++++++||||||.+++.++.++|+ +++++|+.+|...... .+..... +...+.
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~--------~~~~~~~--------~~~~~~--------- 119 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP--------TLQMLDE--------FTQGSF--------- 119 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT--------TCGGGGG--------GTCSCC---------
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccc--------cchhhhh--------hhhcCC---------
Confidence 789999999999999999999999 9999999998754211 0100000 100010
Q ss_pred cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004141 694 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 694 ~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
....+.++++|+|+++|++|..+|++.++.+.+.+ . .+++++++++|.+..
T Consensus 120 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~----~~~~~~~~~gH~~~~ 170 (192)
T 1uxo_A 120 --DHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D----AALYEVQHGGHFLED 170 (192)
T ss_dssp --CHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T----CEEEEETTCTTSCGG
T ss_pred --CHHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C----ceEEEeCCCcCcccc
Confidence 01233456689999999999999999998888877 3 689999999998764
No 169
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.71 E-value=5.2e-17 Score=174.48 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=102.6
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------CCcch----HHHHHHHHCCcEEEEECCC
Q 004141 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~------------~~~~~----~~~~~la~~G~~Vv~~d~r 575 (771)
.+...+|.++.++++.|++. .++.|+||++||++.... ...|. ..++.|+++||+|+++|+|
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~r 173 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNP 173 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCT
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCC
Confidence 44566789999999999842 568899999999765321 01122 4778999999999999999
Q ss_pred CCCCCChhhhhc----------------CCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC
Q 004141 576 GSLGFGEEALQS----------------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 576 G~~~~g~~~~~~----------------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
|.++.+...... ....+....+.|+.+++++|.+++.+|++||+|+||||||++++.+++.. +
T Consensus 174 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~ 252 (398)
T 3nuz_A 174 AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-T 252 (398)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-T
T ss_pred CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-C
Confidence 955443221100 11122223457999999999988888999999999999999999888874 5
Q ss_pred ceeEEEecCCccchh
Q 004141 640 KFVAAAARNPLCNLA 654 (771)
Q Consensus 640 ~~~~~v~~~p~~~~~ 654 (771)
+++++|+.+++..+.
T Consensus 253 ~i~a~v~~~~~~~~~ 267 (398)
T 3nuz_A 253 SIYAFVYNDFLCQTQ 267 (398)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred cEEEEEEecccccch
Confidence 788888877665543
No 170
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.71 E-value=9.9e-17 Score=171.67 Aligned_cols=246 Identities=13% Similarity=0.112 Sum_probs=146.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-------cchHHHH---HHHHCCcEEEEECCCC-CCCCChhhh
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-------SYSKSLA---FLSSVGYSLLIVNYRG-SLGFGEEAL 585 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-------~~~~~~~---~la~~G~~Vv~~d~rG-~~~~g~~~~ 585 (771)
+|..+++..+.++ ...+.|+||++||.+...... .|...+. .|++.||.|+++|+|| .++......
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4566665555443 222358999999987664320 1554443 3667899999999999 343321100
Q ss_pred -hcC-C----CCccccchhhHHHHHHHHHHcCCCCCCeEE-EEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh---
Q 004141 586 -QSL-P----GKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--- 655 (771)
Q Consensus 586 -~~~-~----~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~-l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~--- 655 (771)
... . ..+....++++.+.+..+++. ++.+++. |+||||||.+++.+|.++|++++++|+.+|......
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 196 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI 196 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccch
Confidence 000 0 000124577777777777765 3456887 999999999999999999999999999998643210
Q ss_pred -hh-----cCCCCCcchh------------------------------hhhccCCCCcc--------------------C
Q 004141 656 -MV-----GTTDIPDWCY------------------------------VESYGSKGKDS--------------------F 679 (771)
Q Consensus 656 -~~-----~~~~~~~~~~------------------------------~~~~~~~~~~~--------------------~ 679 (771)
+. .....+.|.. ...+....... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 2b61_A 197 GFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKF 276 (377)
T ss_dssp HHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhh
Confidence 00 0000000100 00000000000 0
Q ss_pred CCCCChhhH----HHHhhcC-------cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC-CCCc
Q 004141 680 TESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDVH 747 (771)
Q Consensus 680 ~~~~~~~~~----~~~~~~s-------p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~-~~~H 747 (771)
......... ..+.... ....+.++++|+|+++|++|.++|+++..+..+.+.+....+++++++ ++||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH 356 (377)
T 2b61_A 277 LERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGH 356 (377)
T ss_dssp HTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred ccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCCc
Confidence 000000000 0011111 134567889999999999999999966666666666665668999999 9999
Q ss_pred cCCCCCChHHHHHHHHHHHHH
Q 004141 748 GIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~fl~~ 768 (771)
.+.... ..++.+.|.+||++
T Consensus 357 ~~~~e~-p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 357 DAFLVD-YDQFEKRIRDGLAG 376 (377)
T ss_dssp GHHHHC-HHHHHHHHHHHHHT
T ss_pred hhhhcC-HHHHHHHHHHHHhc
Confidence 866433 45788889999875
No 171
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.70 E-value=8.4e-17 Score=166.05 Aligned_cols=229 Identities=14% Similarity=0.096 Sum_probs=137.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCC-CCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPH-SVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~-~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|.++++... + ..|.||++||++. ......|...+..|++. |.|+++|+|| +|.+. .. ....
T Consensus 24 ~g~~l~y~~~------g--~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~-~~----~~~~ 86 (296)
T 1j1i_A 24 GGVETRYLEA------G--KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLG---FGKTA-KP----DIEY 86 (296)
T ss_dssp TTEEEEEEEE------C--CSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTT---STTSC-CC----SSCC
T ss_pred CCEEEEEEec------C--CCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCC---CCCCC-CC----CCCC
Confidence 5667765432 1 1367999999642 22223455667777655 9999999999 55443 11 1122
Q ss_pred chhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc-CCC----CCcchhhh
Q 004141 596 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTD----IPDWCYVE 669 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-~~~----~~~~~~~~ 669 (771)
..+++.+.+..+++.- .. +++.|+||||||.+++.++.++|++++++|+.+|......... ... .+......
T Consensus 87 ~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 87 TQDRRIRHLHDFIKAM--NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp CHHHHHHHHHHHHHHS--CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred CHHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 3555555555555442 33 6899999999999999999999999999999987642110000 000 00000000
Q ss_pred hccCCCCccCCCCCChh----------------hHHHHh--------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHH
Q 004141 670 SYGSKGKDSFTESPSVE----------------DLTRFH--------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 725 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~----------------~~~~~~--------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~ 725 (771)
.+....... ......+ ...... .......+.++++|+|+++|++|..+|++.++.
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~ 243 (296)
T 1j1i_A 165 HLVKALTND-GFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYK 243 (296)
T ss_dssp HHHHHHSCT-TCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHhccC-cccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHH
Confidence 000000000 0000000 000000 011223467889999999999999999998888
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 726 YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+.+.+. +.++++++++||.... +...++.+.+.+||.+.+
T Consensus 244 ~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 244 FLDLID----DSWGYIIPHCGHWAMI-EHPEDFANATLSFLSLRV 283 (296)
T ss_dssp HHHHCT----TEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHHC-
T ss_pred HHHHCC----CCEEEEECCCCCCchh-cCHHHHHHHHHHHHhccC
Confidence 877664 3789999999997654 345678889999998754
No 172
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.70 E-value=9.9e-17 Score=162.49 Aligned_cols=218 Identities=17% Similarity=0.098 Sum_probs=129.3
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... .....++++.+.+..+++.-. .
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~----~~~~~~~~~a~dl~~~l~~l~-~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSA---AGINPRRL----DEIHTFRDYSEPLMEVMASIP-P 77 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCCG----GGCCSHHHHHHHHHHHHHHSC-T
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCC---CCCCCCCc----ccccCHHHHHHHHHHHHHHhC-C
Confidence 456889999997754 3468888899988999999999999 55442110 011235555555555554421 1
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh---------hhhcCCCCCcchh--hhhccC----------
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCY--VESYGS---------- 673 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~---------~~~~~~~~~~~~~--~~~~~~---------- 673 (771)
.+++.|+||||||.+++.++.++|++++++|+.++..... .+........|.. ...+..
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 3689999999999999999999999999999887642100 0000000000000 000000
Q ss_pred --CCC-ccCCCCCChhhHHHHh-hcCcc----------ccc---CCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004141 674 --KGK-DSFTESPSVEDLTRFH-SKSPI----------SHI---SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 674 --~~~-~~~~~~~~~~~~~~~~-~~sp~----------~~~---~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
... ..+......+...... ...+. ..+ ...++|+|+++|++|..+|++.++.+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~---- 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA---- 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCC----
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCC----
Confidence 000 0000000001100000 00000 001 11358999999999999999988888877743
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
.++++++++||..... ...++.+.+.+|++
T Consensus 234 ~~~~~i~~~gH~~~~e-~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 234 DKVKEIKEADHMGMLS-QPREVCKCLLDISD 263 (264)
T ss_dssp SEEEEETTCCSCHHHH-SHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCchhhc-CHHHHHHHHHHHhh
Confidence 6889999999986533 34477777888764
No 173
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.70 E-value=3.9e-16 Score=160.39 Aligned_cols=194 Identities=12% Similarity=0.018 Sum_probs=129.8
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-----CcchHHHHHHHHCC----cEEEEECCCCCCCCChhhh
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-----SSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEAL 585 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-----~~~~~~~~~la~~G----~~Vv~~d~rG~~~~g~~~~ 585 (771)
+.++ .+.+++|.|+++.+.+++|+||++||++..... ..+...++.|+++| |+|+++|++|..+.+.
T Consensus 48 s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~--- 123 (297)
T 1gkl_A 48 GING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQ--- 123 (297)
T ss_dssp ETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTT---
T ss_pred cCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchH---
Confidence 3344 899999999987667889999999998754321 12335567777764 9999999987432211
Q ss_pred hcCCCCccccchhhHHHHHHHHHHcCC------------CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccch
Q 004141 586 QSLPGKVGSQDVNDVLTAIDHVIDMGL------------ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 653 (771)
Q Consensus 586 ~~~~~~~~~~~~~D~~~~i~~l~~~~~------------~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~ 653 (771)
.+.....+++. .++.+... .++++++|+|+||||++++.++.++|++|+++++.+|....
T Consensus 124 -----~~~~~~~~~l~---~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~~ 195 (297)
T 1gkl_A 124 -----NFYQEFRQNVI---PFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 195 (297)
T ss_dssp -----THHHHHHHTHH---HHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred -----HHHHHHHHHHH---HHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccccc
Confidence 11111123444 34444322 26678999999999999999999999999999999987532
Q ss_pred hhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004141 654 ALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
... +. ........+... ..+.....++++.+|+.|..+ .+.+++.++|++.
T Consensus 196 ~~~---------------~~---------~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~~~ 246 (297)
T 1gkl_A 196 GNS---------------PQ---------DKANSIAEAINR---SGLSKREYFVFAATGSEDIAY--ANMNPQIEAMKAL 246 (297)
T ss_dssp SSS---------------HH---------HHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHHTS
T ss_pred CCc---------------cc---------hhhhHHHHHHhh---ccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHHHc
Confidence 100 00 000011111111 112233466778899999875 6788999999999
Q ss_pred C----------CCEEEEEeCCCCccC
Q 004141 734 G----------VETKVIVFPNDVHGI 749 (771)
Q Consensus 734 g----------~~~~~~~~~~~~H~~ 749 (771)
| +++++.++++++|.+
T Consensus 247 g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 247 PHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp TTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred CCccccccccCCceEEEECCCCCcCH
Confidence 8 589999999999964
No 174
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.70 E-value=1.9e-17 Score=170.60 Aligned_cols=227 Identities=13% Similarity=0.190 Sum_probs=140.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.-+|.++++..+.++ ..|+||++||++.. ...|...+..|+ +||.|+++|+|| +|.+... ...
T Consensus 16 ~~~g~~l~~~~~g~~------~~~~vl~lHG~~~~--~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~~-----~~~ 78 (299)
T 3g9x_A 16 EVLGERMHYVDVGPR------DGTPVLFLHGNPTS--SYLWRNIIPHVA-PSHRCIAPDLIG---MGKSDKP-----DLD 78 (299)
T ss_dssp EETTEEEEEEEESCS------SSCCEEEECCTTCC--GGGGTTTHHHHT-TTSCEEEECCTT---STTSCCC-----CCC
T ss_pred eeCCeEEEEEecCCC------CCCEEEEECCCCcc--HHHHHHHHHHHc-cCCEEEeeCCCC---CCCCCCC-----CCc
Confidence 336777876665432 34789999997765 335666777774 699999999999 4444221 113
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCC----------Cc
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI----------PD 664 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~----------~~ 664 (771)
...+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++............. +.
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (299)
T 3g9x_A 79 YFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTAD 156 (299)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSS
T ss_pred ccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCC
Confidence 3466666666666665 34568999999999999999999999999999988854322100000000 00
Q ss_pred ---------chhhhhccCCCCccCCCCCChhhHHHH-----------------hhc--------------CcccccCCCC
Q 004141 665 ---------WCYVESYGSKGKDSFTESPSVEDLTRF-----------------HSK--------------SPISHISKVK 704 (771)
Q Consensus 665 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~--------------sp~~~~~~i~ 704 (771)
..+...+.. ..............+ ... +....+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 233 (299)
T 3g9x_A 157 VGRELIIDQNAFIEGALP---KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSP 233 (299)
T ss_dssp HHHHHHTTSCHHHHTHHH---HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred cchhhhccchhhHHHhhh---hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCC
Confidence 000000000 000000001111100 000 1112246789
Q ss_pred CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 705 TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 705 ~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+|+|+++|++|..+|++.++.+.+.+.. +++++++++||.+.. +...++.+.|.+++.+
T Consensus 234 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 234 VPKLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIGPGLHYLQE-DNPDLIGSEIARWLPA 292 (299)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHH-HCHHHHHHHHHHHSGG
T ss_pred CCeEEEecCCCCCCCHHHHHHHHhhCCC----CeEEEeCCCCCcchh-cCHHHHHHHHHHHHhh
Confidence 9999999999999999988888777643 789999999997653 3344566666666543
No 175
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.70 E-value=8.6e-17 Score=167.61 Aligned_cols=229 Identities=15% Similarity=0.196 Sum_probs=139.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...-+ ++.|.||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+.. +. ....
T Consensus 15 ~g~~l~y~~~G~------g~~~pvvllHG~~~~--~~~w~~~~~~L~~-~~~via~Dl~G---~G~S~~---~~--~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRETGA------QDAPVVLFLHGNPTS--SHIWRNILPLVSP-VAHCIAPDLIG---FGQSGK---PD--IAYR 77 (316)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTCC--GGGGTTTHHHHTT-TSEEEEECCTT---STTSCC---CS--SCCC
T ss_pred CCEEEEEEEeCC------CCCCeEEEECCCCCc--hHHHHHHHHHHhh-CCEEEEECCCC---CCCCCC---CC--CCCC
Confidence 466676554421 223589999998765 3467777888865 59999999999 555532 11 1234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccc---hhhhh----------------
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN---LALMV---------------- 657 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~---~~~~~---------------- 657 (771)
++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... +....
T Consensus 78 ~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 3afi_E 78 FFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARA 155 (316)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHH
Confidence 66666666666655 2347899999999999999999999999999998876321 00000
Q ss_pred --cCCCCCc--chhhh---hccCCCCcc-CCCCCChhhHHHH----------------hhcCc---------------cc
Q 004141 658 --GTTDIPD--WCYVE---SYGSKGKDS-FTESPSVEDLTRF----------------HSKSP---------------IS 698 (771)
Q Consensus 658 --~~~~~~~--~~~~~---~~~~~~~~~-~~~~~~~~~~~~~----------------~~~sp---------------~~ 698 (771)
.....+. ..... .+....... .......+....+ ..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T 3afi_E 156 VFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHA 235 (316)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHH
T ss_pred HHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHH
Confidence 0000000 00000 000000000 0000000000000 00000 01
Q ss_pred ccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 699 HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 699 ~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
.+.++++|+|+++|++|..+|++.++.+.+.+. ..++++++++||....+ ....+.+.|.+||++.
T Consensus 236 ~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~GH~~~~e-~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 236 ALAASSYPKLLFTGEPGALVSPEFAERFAASLT----RCALIRLGAGLHYLQED-HADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSS----SEEEEEEEEECSCHHHH-HHHHHHHHHHHHHHHH
T ss_pred hhhccCCCeEEEecCCCCccCHHHHHHHHHhCC----CCeEEEcCCCCCCchhh-CHHHHHHHHHHHHhhc
Confidence 234689999999999999999888887776654 37899999999986533 3457888899999764
No 176
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.70 E-value=2.1e-16 Score=162.05 Aligned_cols=231 Identities=15% Similarity=0.233 Sum_probs=132.2
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004141 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|.++++..+.+.+ +.|+||++||.+.+ ...|...+..|++ ||.|+++|+|| +|.+... ....
T Consensus 11 ~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~---~~~~ 76 (285)
T 3bwx_A 11 TSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRG---RGDSDYA---KDPM 76 (285)
T ss_dssp ECTTSCEEEEEEECBCT-----TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTT---BTTSCCC---SSGG
T ss_pred ecCCCceEEEEEcCCCC-----CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCC---CCCCCCC---CCcc
Confidence 34567888877775431 24679999997765 4468888888866 99999999999 5544321 0111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCC--ccchhh------hhcCC-CCCc
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP--LCNLAL------MVGTT-DIPD 664 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p--~~~~~~------~~~~~-~~~~ 664 (771)
...++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++ ...... +.... ....
T Consensus 77 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 77 TYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp GCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESS
T ss_pred ccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCccccc
Confidence 22333333333333332 1346799999999999999999999999999998643 221100 00000 0000
Q ss_pred chhh-hhccCCCCccCCCCCChhhHH-------------------------HHhhc-------CcccccCCC-CCcEEEE
Q 004141 665 WCYV-ESYGSKGKDSFTESPSVEDLT-------------------------RFHSK-------SPISHISKV-KTPTIFL 710 (771)
Q Consensus 665 ~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~-------sp~~~~~~i-~~P~lii 710 (771)
|... ..+.......+.... ..... .+... .....+.++ ++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 233 (285)
T 3bwx_A 155 WMHAARALQESSGDVYPDWD-ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVL 233 (285)
T ss_dssp HHHHHHHHHHHHTTTSTTCC-HHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHhhhhcccccC-hHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEE
Confidence 1000 000000000000000 00000 00000 000012233 7999999
Q ss_pred eeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 711 LGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 711 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+|++|..++++.++.+.+. .+.++++++++||...... . +.+..|.+||++
T Consensus 234 ~G~~D~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~-p-~~~~~i~~fl~~ 284 (285)
T 3bwx_A 234 RGETSDILSAQTAAKMASR-----PGVELVTLPRIGHAPTLDE-P-ESIAAIGRLLER 284 (285)
T ss_dssp EETTCSSSCHHHHHHHHTS-----TTEEEEEETTCCSCCCSCS-H-HHHHHHHHHHTT
T ss_pred EeCCCCccCHHHHHHHHhC-----CCcEEEEeCCCCccchhhC-c-hHHHHHHHHHHh
Confidence 9999999998776665443 4589999999999866444 3 334678888863
No 177
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.69 E-value=5.2e-17 Score=170.50 Aligned_cols=224 Identities=16% Similarity=0.165 Sum_probs=135.9
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
+..+.+..+.+ ..|+||++||.+.. ...|...+..| ||.|+++|+|| +|.+... .......
T Consensus 69 ~~~~~~~~~g~-------~~~~vv~~hG~~~~--~~~~~~~~~~l---g~~Vi~~D~~G---~G~S~~~----~~~~~~~ 129 (330)
T 3p2m_A 69 AGAISALRWGG-------SAPRVIFLHGGGQN--AHTWDTVIVGL---GEPALAVDLPG---HGHSAWR----EDGNYSP 129 (330)
T ss_dssp ETTEEEEEESS-------SCCSEEEECCTTCC--GGGGHHHHHHS---CCCEEEECCTT---STTSCCC----SSCBCCH
T ss_pred CceEEEEEeCC-------CCCeEEEECCCCCc--cchHHHHHHHc---CCeEEEEcCCC---CCCCCCC----CCCCCCH
Confidence 34466555533 24779999997765 33565555554 99999999999 4444211 1122345
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc--CCC----------CCcc
Q 004141 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--TTD----------IPDW 665 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~--~~~----------~~~~ 665 (771)
+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... ... ...+
T Consensus 130 ~~~a~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (330)
T 3p2m_A 130 QLNSETLAPVLRE--LAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREF 207 (330)
T ss_dssp HHHHHHHHHHHHH--SSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCB
T ss_pred HHHHHHHHHHHHH--hCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccc
Confidence 5666666666555 3457899999999999999999999999999999998654211100 000 0000
Q ss_pred hhhhhccCCCCccCCCCCChhhHHHHhhc--------------C----------cccccCCCCCcEEEEeeCCCCccCcH
Q 004141 666 CYVESYGSKGKDSFTESPSVEDLTRFHSK--------------S----------PISHISKVKTPTIFLLGAQDLRVPVS 721 (771)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------s----------p~~~~~~i~~P~lii~G~~D~~vp~~ 721 (771)
............ ................ . ....+.++++|+|+++|++|..+|++
T Consensus 208 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 286 (330)
T 3p2m_A 208 PSFQAMLDLTIA-AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQ 286 (330)
T ss_dssp SCHHHHHHHHHH-HCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHH
T ss_pred cCHHHHHHHHHh-cCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHH
Confidence 000000000000 0000000000000000 0 01235678999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEE-EEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 722 NGLQYARALREKGVETK-VIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 722 ~~~~~~~~l~~~g~~~~-~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
.++.+.+.+.. .+ +++++++||.+.. +...++.+.+.+||++
T Consensus 287 ~~~~l~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 287 DTAELHRRATH----FRGVHIVEKSGHSVQS-DQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHHHCSS----EEEEEEETTCCSCHHH-HCHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCC----CeeEEEeCCCCCCcch-hCHHHHHHHHHHHHhc
Confidence 88888776643 67 9999999998653 3445777888888764
No 178
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.69 E-value=1.4e-16 Score=161.90 Aligned_cols=212 Identities=16% Similarity=0.196 Sum_probs=131.2
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|.||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+.... . . ...++++.+.+..+++. ++.++
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~~~~--~-~-~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPG---HGEDQSSM--D-E-TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTT---STTCCCCT--T-S-CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCC---CCCCCCCC--C-C-ccCHHHHHHHHHHHHHH--cCCCc
Confidence 469999997765 34677778888764 9999999999 55543211 1 0 23456666666656555 34578
Q ss_pred EEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh----cC---CCC------Ccch-hhhhccCCCCccCCC--
Q 004141 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----GT---TDI------PDWC-YVESYGSKGKDSFTE-- 681 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~----~~---~~~------~~~~-~~~~~~~~~~~~~~~-- 681 (771)
+.|+||||||.+|+.++.++|++++++|+.++........ .. ... .... +...+... ..+..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 162 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKL--PLFQSQL 162 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--GGGGGGG
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhC--ccccccc
Confidence 9999999999999999999999999999998754321000 00 000 0000 00000000 00000
Q ss_pred -CC--------------ChhhHH-HHh------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004141 682 -SP--------------SVEDLT-RFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 682 -~~--------------~~~~~~-~~~------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
.. ...... .+. ..+....+.++++|+|+++|++|..+|++..+ +.+.+ .++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~----~~~~~ 237 (269)
T 2xmz_A 163 ELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI----PNSKC 237 (269)
T ss_dssp GSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS----TTEEE
T ss_pred cCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC----CCcEE
Confidence 00 000000 000 01112356788999999999999999876543 54443 34899
Q ss_pred EEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 740 IVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 740 ~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
++++++||.+... ...++.+.+.+||++.
T Consensus 238 ~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 238 KLISATGHTIHVE-DSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEETTCCSCHHHH-SHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCChhhc-CHHHHHHHHHHHHHHh
Confidence 9999999987643 4557888999999764
No 179
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.69 E-value=3e-16 Score=166.58 Aligned_cols=122 Identities=20% Similarity=0.312 Sum_probs=88.5
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.++++....|+ ....|+||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.. +......
T Consensus 10 ~~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g---~g~s~~---~~~~~~~ 77 (356)
T 2e3j_A 10 CRGTRIHAVADSPP----DQQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRG---YGRSSK---YRVQKAY 77 (356)
T ss_dssp ETTEEEEEEEECCT----TCCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCC---CCSGGGG
T ss_pred cCCeEEEEEEecCC----CCCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCC---CCCCCC---CCccccc
Confidence 35788887777654 1245889999997765 3457777888989999999999999 444321 1111122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
...++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.++..
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 345555555555544 345789999999999999999999999999999987654
No 180
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.69 E-value=2e-16 Score=178.71 Aligned_cols=232 Identities=15% Similarity=0.188 Sum_probs=144.1
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.+++..... +.|+||++||++.+ ...|...+..|+++||.|+++|+|| +|.+... ......
T Consensus 245 ~dg~~l~~~~~g--------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G---~G~S~~~---~~~~~~ 308 (555)
T 3i28_A 245 KPRVRLHFVELG--------SGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKG---YGESSAP---PEIEEY 308 (555)
T ss_dssp ETTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTSCCC---SCGGGG
T ss_pred CCCcEEEEEEcC--------CCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCC---CCCCCCC---CCcccc
Confidence 367777654432 35899999998765 3467788899999999999999999 4444221 111222
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhh-------------------
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM------------------- 656 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~------------------- 656 (771)
..+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|.......
T Consensus 309 ~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 309 CMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp SHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 344544444444443 24568999999999999999999999999999988775321000
Q ss_pred hcCCCCCc--------chhhhhccCC---------------------CCccCCCCCChhhHHHHh---------------
Q 004141 657 VGTTDIPD--------WCYVESYGSK---------------------GKDSFTESPSVEDLTRFH--------------- 692 (771)
Q Consensus 657 ~~~~~~~~--------~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~--------------- 692 (771)
........ ..+...+... ...........+....+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 00000000 0000000000 000000000011111110
Q ss_pred -------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHH
Q 004141 693 -------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 765 (771)
Q Consensus 693 -------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 765 (771)
..+....+.++++|+|+++|++|..+|++.++.+++.+. ++++++++++||.... +...++.+.+.+|
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f 541 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQM-DKPTEVNQILIKW 541 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHH-HSHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCCCcch-hCHHHHHHHHHHH
Confidence 012223456889999999999999999998888776654 3789999999997653 3456788899999
Q ss_pred HHHhh
Q 004141 766 FKKYC 770 (771)
Q Consensus 766 l~~~L 770 (771)
|++..
T Consensus 542 l~~~~ 546 (555)
T 3i28_A 542 LDSDA 546 (555)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 98764
No 181
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.69 E-value=2.1e-16 Score=161.58 Aligned_cols=217 Identities=14% Similarity=0.089 Sum_probs=136.7
Q ss_pred cEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECCCCCCCCChhhhhcCC--CCccccchhhH--HHHHHHHHHc
Q 004141 538 PLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVGSQDVNDV--LTAIDHVIDM 610 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~--~~~~~~~~~D~--~~~i~~l~~~ 610 (771)
|+||++||++.......|... .+.+++.||.|+++|.++...+... ..... +........+. .+.+.++.++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~ 108 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDW-YQPSQSNGQNYTYKWETFLTREMPAWLQAN 108 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBC-SSSCTTTTCCSCCBHHHHHHTHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCC-CCCCccccccccccHHHHHHHHHHHHHHHH
Confidence 589999997531113344432 3567788999999998864333211 00000 00011223332 2334444443
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhc--C-----CCCCcchhhhhccCCCCccCCCCC
Q 004141 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--T-----TDIPDWCYVESYGSKGKDSFTESP 683 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~ 683 (771)
..+++++++|+|+||||++|+.++.++|++|+++++.+|..+...... . .+...+.....++. +
T Consensus 109 ~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~ 179 (280)
T 1dqz_A 109 KGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGP---------S 179 (280)
T ss_dssp HCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCS---------T
T ss_pred cCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHHHhhhccCcCHHHhcCC---------C
Confidence 346778999999999999999999999999999999999875432100 0 00000000001111 1
Q ss_pred ChhhHHHHhhcCcccccCCC---CCcEEEEeeCCCC--------------ccCcHHHHHHHHHHHhCC-CCEEEEEeCCC
Q 004141 684 SVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREKG-VETKVIVFPND 745 (771)
Q Consensus 684 ~~~~~~~~~~~sp~~~~~~i---~~P~lii~G~~D~--------------~vp~~~~~~~~~~l~~~g-~~~~~~~~~~~ 745 (771)
. ...+...+|...+.++ .+|+++.+|+.|. .++.+++++++++|+++| +++++.+++++
T Consensus 180 ~---~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g 256 (280)
T 1dqz_A 180 S---DPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNG 256 (280)
T ss_dssp T---SHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCC
T ss_pred C---chhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 1 1245556776555444 5899999999997 578899999999999999 99999999888
Q ss_pred CccCCCCCChHHHHHHHHHHHHHhh
Q 004141 746 VHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+|.+. .....+...+.||.+.|
T Consensus 257 ~H~~~---~w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 257 THSWP---YWNEQLVAMKADIQHVL 278 (280)
T ss_dssp CSSHH---HHHHHHHHTHHHHHHHH
T ss_pred ccChH---HHHHHHHHHHHHHHHHh
Confidence 99752 12345567777877765
No 182
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.69 E-value=1.4e-14 Score=153.17 Aligned_cols=281 Identities=6% Similarity=-0.019 Sum_probs=172.1
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004141 48 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 48 ~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
..++||++|++..... .. ......++.++.. .++..+....+ .....++|||||+++++..... ..++
T Consensus 47 ~~s~dg~~l~~~~~~~-~~-~~~~~~v~~~d~~--~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~---~~v~ 114 (353)
T 3vgz_A 47 AYSQQENALWLATSQS-RK-LDKGGVVYRLDPV--TLEVTQAIHND-----LKPFGATINNTTQTLWFGNTVN---SAVT 114 (353)
T ss_dssp EEETTTTEEEEEECCC-TT-TEESEEEEEECTT--TCCEEEEEEES-----SCCCSEEEETTTTEEEEEETTT---TEEE
T ss_pred EECCCCCEEEEEcCCC-cC-CCCCccEEEEcCC--CCeEEEEEecC-----CCcceEEECCCCCEEEEEecCC---CEEE
Confidence 4567998886554321 11 1124578887653 22332222111 2356789999999887665432 3566
Q ss_pred EEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004141 128 ELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 128 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
.++ ..++....+..................+.|||||++|++....
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------------------------------- 161 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--------------------------------- 161 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES---------------------------------
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC---------------------------------
Confidence 666 5555555555432110000000012468999999987775321
Q ss_pred CcCcccCCccCceEEEEEccCCceeeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 207 DWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
....|+++|+.+++.... .+ ....+..++|+|||+. |++.. ....|+.+
T Consensus 162 ---------~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~---------------~~~~i~~~ 211 (353)
T 3vgz_A 162 ---------KESVIWVVDGGNIKLKTA--IQNTGKMSTGLALDSEGKR----LYTTN---------------ADGELITI 211 (353)
T ss_dssp ---------SSCEEEEEETTTTEEEEE--ECCCCTTCCCCEEETTTTE----EEEEC---------------TTSEEEEE
T ss_pred ---------CCceEEEEcCCCCceEEE--ecCCCCccceEEECCCCCE----EEEEc---------------CCCeEEEE
Confidence 136799999999887665 33 3334678899999997 76654 23478899
Q ss_pred ecccccchhhhhhhhcCCCCCCccee-cCC----CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 286 RVSLYKSEASELELKESSSEDLPVVN-LTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~~~-lt~----~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
|+ .+++... +.. .........|||||++|+..... ...|+++|+.+++
T Consensus 212 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 212 DT-----------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----------AAEVLVVDTRNGN 264 (353)
T ss_dssp ET-----------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS----------SSEEEEEETTTCC
T ss_pred EC-----------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC----------CCEEEEEECCCCc
Confidence 97 5555432 222 12234568999999988665533 2569999987765
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEE
Q 004141 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLL 440 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~ 440 (771)
.... +... ....++|+|||++|+++...+ ..|+.+|+.++++..............|
T Consensus 265 ~~~~----------~~~~-----------~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 321 (353)
T 3vgz_A 265 ILAK----------VAAP-----------ESLAVLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPTHPNSLAL 321 (353)
T ss_dssp EEEE----------EECS-----------SCCCEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred EEEE----------EEcC-----------CCceEEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCCCCCeEEE
Confidence 4211 1110 123578999999887765433 4678889988887765544444556789
Q ss_pred eecCCEEEEEEeC
Q 004141 441 TLDGDNIIAVSSS 453 (771)
Q Consensus 441 s~dg~~l~~~~~~ 453 (771)
++||+.|+++...
T Consensus 322 s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 322 SADGKTLYVSVKQ 334 (353)
T ss_dssp CTTSCEEEEEEEC
T ss_pred cCCCCEEEEEEcc
Confidence 9999988888766
No 183
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.69 E-value=2.3e-16 Score=160.64 Aligned_cols=218 Identities=17% Similarity=0.135 Sum_probs=132.3
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... ......++++.+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAA---SGTDLRK----IEELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTT---STTCCCC----GGGCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCC---CCCCccC----cccccCHHHHHHHHHHHHHHhc-cCC
Confidence 4789999997754 3467788899989999999999999 5544211 0111245666655555555421 136
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh---------hhhcCCCCCcchh--hhhccCC-----------
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCY--VESYGSK----------- 674 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~---------~~~~~~~~~~~~~--~~~~~~~----------- 674 (771)
++.|+||||||.+++.++.++|++++++|+.++..... .+........|.. ...+...
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCH
Confidence 89999999999999999999999999999887642100 0000000000000 0000000
Q ss_pred -CC-ccCCCCCChhhHHH---HhhcC-----------cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 675 -GK-DSFTESPSVEDLTR---FHSKS-----------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 675 -~~-~~~~~~~~~~~~~~---~~~~s-----------p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. ..+......+.... +.... ........++|+|+++|++|..+|++.++.+.+.+.. .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~----~~ 229 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV----TE 229 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC----SE
T ss_pred HHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC----Ce
Confidence 00 00000000010000 00000 0000011368999999999999999988888877643 58
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++++++||..... ...++.+.+.+|+++.
T Consensus 230 ~~~i~~aGH~~~~e-~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 230 AIEIKGADHMAMLC-EPQKLCASLLEIAHKY 259 (273)
T ss_dssp EEEETTCCSCHHHH-SHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCchhc-CHHHHHHHHHHHHHHh
Confidence 89999999986643 3457888999999764
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=6.4e-16 Score=179.93 Aligned_cols=268 Identities=9% Similarity=0.103 Sum_probs=168.5
Q ss_pred EeCCCCCeEEEEecCCCC-CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCcc
Q 004141 105 VPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 182 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 182 (771)
..+|||++++|+++..+. ...+|.+. .++..+.+++...-..+. ...+..++|||||++|||......
T Consensus 78 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDg~~la~~~~~~G------- 147 (710)
T 2xdw_A 78 CHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDG---TVALRGYAFSEDGEYFAYGLSASG------- 147 (710)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTS---CEEEEEEEECTTSSEEEEEEEETT-------
T ss_pred CCEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCC---CEEEEEEEECCCCCEEEEEEcCCC-------
Confidence 345999999999876532 34678877 566666666542211100 012368999999999999876431
Q ss_pred CCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEe
Q 004141 183 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
....+|+++|+++|+...+ +.....+..++|||||+. |+|++
T Consensus 148 --------------------------------~~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~----l~~~~ 189 (710)
T 2xdw_A 148 --------------------------------SDWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKG----MFYNA 189 (710)
T ss_dssp --------------------------------CSCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSE----EEEEE
T ss_pred --------------------------------CceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCE----EEEEE
Confidence 1235899999999998775 223333668999999999 99988
Q ss_pred ecCcce-eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCC---CccccceeecCCCCEEEEEec
Q 004141 263 WSSETR-KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 263 ~~~~~~-~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~---~~~~~~p~~SpDG~~l~f~~~ 336 (771)
...... ..+.....++..+||++++ .++.. +.+... .....++.|||||++|+|.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVL-----------------GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ECCccccccccccccCCCCEEEEEEC-----------------CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 543210 0011111234568999998 55442 222222 233568999999999999987
Q ss_pred CCCCCCCCccccccceeeecCC------CC--CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004141 337 KSSVDSGAHSATDSLHRIDWPT------NG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~------~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~ 408 (771)
+.. ....+||++|+.+ +. .+.++... + .....|++||+.|+|.++
T Consensus 253 ~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-----------~----------~~~~~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 253 EGC------DPVNRLWYCDLQQESNGITGILKWVKLIDNF-----------E----------GEYDYVTNEGTVFTFKTN 305 (710)
T ss_dssp CSS------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-----------S----------SCEEEEEEETTEEEEEEC
T ss_pred ccC------CCccEEEEEECcccccccCCccceEEeeCCC-----------C----------cEEEEEeccCCEEEEEEC
Confidence 531 1146899999876 32 22221110 0 012258999999999887
Q ss_pred eCC-eeEEEEEECCCCc---EEEecCCCC--CceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 409 WGS-SQVIISVNVSSGE---LLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 409 ~~~-~~~l~~~d~~tg~---~~~l~~~~~--~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
.+. ...|+.+++++++ .+.++.... .+....++ +++.++++.... ...+|++.++.
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~-g~~~l~~~~~~ 367 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD-VKNTLQLHDLA 367 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC-CEEEEEEEECC
Confidence 543 5689999998874 366665543 23334455 466777666443 34567877763
No 185
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.68 E-value=8.4e-16 Score=160.15 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=79.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..++....-++ ..|.||++||++.......+ ...+...||.|+++|+|| +|.+... .......
T Consensus 23 ~g~~l~~~~~g~~------~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 87 (317)
T 1wm1_A 23 DGHRIYWELSGNP------NGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRG---CGRSRPH---ASLDNNT 87 (317)
T ss_dssp SSCEEEEEEEECT------TSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTT---STTCBST---TCCTTCS
T ss_pred CCcEEEEEEcCCC------CCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCC---CCCCCCC---ccccccc
Confidence 5677765544321 23669999997654322111 223445799999999999 5554321 1111233
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
.+++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++..
T Consensus 88 ~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 88 TWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 140 (317)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCC
Confidence 55666666666665 345689999999999999999999999999999987653
No 186
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.68 E-value=4.3e-17 Score=166.02 Aligned_cols=216 Identities=16% Similarity=0.155 Sum_probs=130.2
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|+||++||.+.. ...|...+..|.++||.|+++|+||.+..... .........+++.+.+..+++. ++.
T Consensus 23 ~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (279)
T 4g9e_A 23 EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDA-----IDPDRSYSMEGYADAMTEVMQQ--LGI 93 (279)
T ss_dssp CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTTSTTSCCC-----SCHHHHSSHHHHHHHHHHHHHH--HTC
T ss_pred CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCCCCCCCCC-----CCcccCCCHHHHHHHHHHHHHH--hCC
Confidence 46889999998765 44677788887778999999999995443211 0011122455666666555554 244
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCC-ccchhhhh-cCCCCCcchh----------hhhccCCCCccCCCCC
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP-LCNLALMV-GTTDIPDWCY----------VESYGSKGKDSFTESP 683 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p-~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 683 (771)
++++|+|||+||.+++.++.++|+ +.++|+.++ ........ .......... ...+.. ..+....
T Consensus 94 ~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 169 (279)
T 4g9e_A 94 ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYAR---STCGEPF 169 (279)
T ss_dssp CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHH---HHHCSSC
T ss_pred CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHH---hhccCcc
Confidence 689999999999999999999999 555555444 33221110 0000000000 000000 0000000
Q ss_pred ChhhHHHHh------------------hcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHH-HHHHhCCCCEEEEEeCC
Q 004141 684 SVEDLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA-RALREKGVETKVIVFPN 744 (771)
Q Consensus 684 ~~~~~~~~~------------------~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~-~~l~~~g~~~~~~~~~~ 744 (771)
.......+. ..+....+.++++|+|+++|++|..+|++....++ +.+. +++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~ 245 (279)
T 4g9e_A 170 EASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW----EGKTHVIDN 245 (279)
T ss_dssp CHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG----GGSCEEETT
T ss_pred cHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC----CCeEEEECC
Confidence 000000010 11222335678999999999999999988777665 3332 367889999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHh
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+||.+.. +...++.+.+.+||++.
T Consensus 246 ~gH~~~~-~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 246 AGHAPFR-EAPAEFDAYLARFIRDC 269 (279)
T ss_dssp CCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred CCcchHH-hCHHHHHHHHHHHHHHh
Confidence 9998553 44567888999999875
No 187
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.68 E-value=7e-16 Score=161.67 Aligned_cols=120 Identities=21% Similarity=0.307 Sum_probs=82.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++++...- ..|+||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+..... .......
T Consensus 19 ~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~-~~~~~~~ 84 (328)
T 2cjp_A 19 NGLNMHLAELG--------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRG---YGDTTGAPL-NDPSKFS 84 (328)
T ss_dssp TTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTCBCCCT-TCGGGGS
T ss_pred CCcEEEEEEcC--------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCC---CCCCCCcCc-CCccccc
Confidence 56677655431 23789999997765 4468888889988999999999999 555432100 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~ 650 (771)
++++.+.+..+++.-..+.+++.|+||||||.+++.+|.++|++++++|+.++.
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 444444443333331112578999999999999999999999999999998753
No 188
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.68 E-value=5e-17 Score=178.08 Aligned_cols=242 Identities=17% Similarity=0.212 Sum_probs=142.7
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-chHHHH---HHHHCCcEEEEECCCCCCCCChhhhhcC-C--C
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQSL-P--G 590 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~~~~~---~la~~G~~Vv~~d~rG~~~~g~~~~~~~-~--~ 590 (771)
|.++++..+.+. ...+.|+||++||.+.+..... |...+. .|...||.|+++|+||+ ++|.+..... + +
T Consensus 93 g~~l~y~~~G~~---~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~ 168 (444)
T 2vat_A 93 DVPVAYKSWGRM---NVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAE 168 (444)
T ss_dssp EEEEEEEEESCC---CTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC
T ss_pred ceeEEEEEecCC---CCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCCCcccc
Confidence 445554444332 2234588999999776643211 544443 46578999999999994 1333321000 0 0
Q ss_pred C---c----cccchhhHHHHHHHHHHcCCCCCCe-EEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh-----
Q 004141 591 K---V----GSQDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----- 657 (771)
Q Consensus 591 ~---~----~~~~~~D~~~~i~~l~~~~~~d~~r-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~----- 657 (771)
. + ....++|+.+.+..+++. ++.++ ++|+||||||.+++.++.++|++++++|+.++........
T Consensus 169 ~~~~~~~~f~~~t~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~ 246 (444)
T 2vat_A 169 GQRPYGAKFPRTTIRDDVRIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFE 246 (444)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHH
Confidence 0 1 123566666666666654 23467 9999999999999999999999999999998865421000
Q ss_pred ----cCCCCCcch------------------------------hhhhccCCCCc-c----------------------CC
Q 004141 658 ----GTTDIPDWC------------------------------YVESYGSKGKD-S----------------------FT 680 (771)
Q Consensus 658 ----~~~~~~~~~------------------------------~~~~~~~~~~~-~----------------------~~ 680 (771)
.....+.|. +...+...... . +.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T 2vat_A 247 TQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRA 326 (444)
T ss_dssp HHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-------------------------
T ss_pred HHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccc
Confidence 000000000 00011110000 0 00
Q ss_pred CCC--ChhhH---------------------HHHhhc--------CcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004141 681 ESP--SVEDL---------------------TRFHSK--------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 681 ~~~--~~~~~---------------------~~~~~~--------sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~ 729 (771)
... ..+.. ..+... +....+.++++|+|+++|++|..+|++.++++.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~ 406 (444)
T 2vat_A 327 GQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRS 406 (444)
T ss_dssp --CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 000 00000 000000 13345678999999999999999999988888877
Q ss_pred HHhCCCCEEEEEeC-CCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 730 LREKGVETKVIVFP-NDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 730 l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+.. +++++++ ++||..... ...++.+.|.+||++++
T Consensus 407 ~p~----~~~~~i~~~~GH~~~~e-~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 407 IPN----SRLCVVDTNEGHDFFVM-EADKVNDAVRGFLDQSL 443 (444)
T ss_dssp STT----EEEEECCCSCGGGHHHH-THHHHHHHHHHHHTC--
T ss_pred CCC----cEEEEeCCCCCcchHHh-CHHHHHHHHHHHHHHhc
Confidence 653 7999999 899986543 35578889999998765
No 189
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.68 E-value=1.6e-16 Score=160.17 Aligned_cols=218 Identities=14% Similarity=0.060 Sum_probs=130.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... ......++++.+.+..+++.-. ..+
T Consensus 3 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~l~-~~~ 72 (257)
T 3c6x_A 3 FAHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAA---SGVDPRQ----IEEIGSFDEYSEPLLTFLEALP-PGE 72 (257)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTT---STTCSCC----GGGCCSHHHHTHHHHHHHHTSC-TTC
T ss_pred CCcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCC---CCCCCCC----cccccCHHHHHHHHHHHHHhcc-ccC
Confidence 3679999997754 3468888999999999999999999 5544210 0111235555555555555421 136
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccch-----h----hhhc-CCCC-Ccch-hhh---------hccCCC
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-----A----LMVG-TTDI-PDWC-YVE---------SYGSKG 675 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~-----~----~~~~-~~~~-~~~~-~~~---------~~~~~~ 675 (771)
++.|+||||||.+++.++.++|++++++|+.++.... . .+.. .... ..+. ... ......
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTL 152 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHH
Confidence 8999999999999999999999999999988764210 0 0000 0000 0000 000 000000
Q ss_pred C-ccCCCCCChhhHHHHh-hcCc-------------ccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEE
Q 004141 676 K-DSFTESPSVEDLTRFH-SKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 740 (771)
Q Consensus 676 ~-~~~~~~~~~~~~~~~~-~~sp-------------~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 740 (771)
. ..+............. ...+ .......++|+|+++|++|..+|++.++.+.+.+. +.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~----~~~~~ 228 (257)
T 3c6x_A 153 LRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK----PDKVY 228 (257)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC----CSEEE
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC----CCeEE
Confidence 0 0000000111101000 0001 00001126899999999999999998888877664 36899
Q ss_pred EeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 741 VFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 741 ~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++++||.... +...++.+.+.+|++++
T Consensus 229 ~i~~~gH~~~~-e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 229 KVEGGDHKLQL-TKTKEIAEILQEVADTY 256 (257)
T ss_dssp ECCSCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred EeCCCCCCccc-CCHHHHHHHHHHHHHhc
Confidence 99999998653 34457888899998764
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=3.7e-16 Score=165.15 Aligned_cols=248 Identities=11% Similarity=0.063 Sum_probs=157.4
Q ss_pred cceEEEeCCCCCeEEEEecCCC-----CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004141 100 GASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
....|++ ||++|||+....+ ....+|+++ .+++.+++ ... ..+.|||||++|||.+..
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~----------~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENA----------TMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESC----------EEEEECTTSSEEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccC----------CCeEECCCCCEEEEEEec
Confidence 3567888 9999999875421 234577776 55555444 222 589999999999998754
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCC
Q 004141 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~ 253 (771)
.. ....+||++|+++++.+.+ +.... +..+.|||||+.
T Consensus 80 ~~---------------------------------------~~~~~l~~~~~~~g~~~~l--~~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 80 EE---------------------------------------KKVSEIWVADLETLSSKKI--LEAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp TT---------------------------------------TTEEEEEEEETTTTEEEEE--EEESE-EEEEEECTTSSE
T ss_pred cC---------------------------------------CCcceEEEEECCCCceEEE--EcCCC-ccceeECCCCCE
Confidence 21 0236899999999998888 33333 788999999999
Q ss_pred CccEEEEEeecCcce-------e-----eeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCCCcccc
Q 004141 254 LHQYLVFVGWSSETR-------K-----LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAF 320 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~-------~-----~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~ 320 (771)
|+|.+...... + .|..+......+||++|+ .+++. +.|+. . .+.
T Consensus 118 ----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~-----------------~~~~~~~~l~~-~-~~~ 174 (347)
T 2gop_A 118 ----LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT-----------------ESEEVIEEFEK-P-RFS 174 (347)
T ss_dssp ----EEEEEECCCC---------CCCC---------CEEEEEEEET-----------------TTTEEEEEEEE-E-TTC
T ss_pred ----EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC-----------------CCCeEEeeecC-C-Ccc
Confidence 99987531000 0 010011112358999998 77777 77776 4 778
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccc-cccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccC
Q 004141 321 FPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 399 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~D 399 (771)
.+.||||| |+|.+..... ..... ..+||++| +++.+.++.. . .. ..+|||
T Consensus 175 ~~~~spdg--~~~~~~~~~~--~~~~~~~~~l~~~d--~~~~~~l~~~-~--------------------~~--~~~spd 225 (347)
T 2gop_A 175 SGIWHRDK--IVVNVPHREI--IPQYFKFWDIYIWE--DGKEEKMFEK-V--------------------SF--YAVDSD 225 (347)
T ss_dssp EEEEETTE--EEEEEECCCS--SCCSSCCEEEEEEE--TTEEEEEEEE-E--------------------SE--EEEEEC
T ss_pred cccCCCCe--EEEEEecccc--cccccccccEEEeC--CCceEEeccC-c--------------------ce--eeECCC
Confidence 89999999 7777754310 00001 45789988 4443333221 0 01 124999
Q ss_pred CCEEEEEeeeC-----CeeEEEEEECCCCcEEEecCCC-CCcee-eEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004141 400 GCTMLLSSIWG-----SSQVIISVNVSSGELLRITPAE-SNFSW-SLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 400 g~~l~~~~~~~-----~~~~l~~~d~~tg~~~~l~~~~-~~~~~-~~~s~dg~~l~~~~~~~~~p~~l~~~~ 464 (771)
|+.|++.+... ....||.+| +++.+.++... ..+.. ..|+ |+ ++++.+... ..+|| .+
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~ 290 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW 290 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec
Confidence 99998887543 246899999 78888887653 33333 5677 66 555554333 34566 55
No 191
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.68 E-value=7.3e-15 Score=157.89 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=163.9
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
....++|||||++|++....+ ..+..++ ..++..+.+.....+ ..++|||||++|++....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~~~----- 94 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHS---NDVSIIDTATNNVIATVPAGSSP----------QGVAVSPDGKQVYVTNMA----- 94 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGG---TEEEEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT-----
T ss_pred CcceEEECCCCCEEEEECCCC---CeEEEEECCCCeEEEEEECCCCc----------cceEECCCCCEEEEEECC-----
Confidence 467899999999987665332 2344434 455555555443333 589999999999886422
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|++||+.+++.... ......+..++|+|||+. |
T Consensus 95 --------------------------------------~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 130 (391)
T 1l0q_A 95 --------------------------------------SSTLSVIDTTSNTVAGT--VKTGKSPLGLALSPDGKK----L 130 (391)
T ss_dssp --------------------------------------TTEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSE----E
T ss_pred --------------------------------------CCEEEEEECCCCeEEEE--EeCCCCcceEEECCCCCE----E
Confidence 26799999999987666 444556788999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
++++. ....|+++|+ .+++...............|+|||+.|++....+
T Consensus 131 ~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 131 YVTNN--------------GDKTVSVINT-----------------VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEET--------------TTTEEEEEET-----------------TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EEEeC--------------CCCEEEEEEC-----------------CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 76652 2347999998 6665544433344567899999999887665442
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
..|+++|+.+++...... . . ..+..++|+|||+.|++.........|+.+
T Consensus 180 ----------~~v~~~d~~~~~~~~~~~----------~---~-------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 180 ----------MSISVIDTVTNSVIDTVK----------V---E-------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp ----------TEEEEEETTTTEEEEEEE----------C---S-------SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred ----------CEEEEEECCCCeEEEEEe----------c---C-------CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 469999988765321110 0 0 013456899999988877653345678888
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
|+.+++...............++++++.++++.+.. ..+.+.++.++
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 998887665544444445568899999887776432 56777776544
No 192
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.67 E-value=1.8e-15 Score=161.57 Aligned_cols=245 Identities=14% Similarity=0.105 Sum_probs=149.4
Q ss_pred cccccCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--CCC----------------cch-HHHHHH-HHCCcE
Q 004141 511 ANLTKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--SLS----------------SYS-KSLAFL-SSVGYS 568 (771)
Q Consensus 511 ~~~~~~~g~~--l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~--~~~----------------~~~-~~~~~l-a~~G~~ 568 (771)
+.+++.+|.+ ..+.++.|.+. ..+.|+|.|-||..+.. +.. .+. ..+..+ +++||+
T Consensus 80 Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~ 157 (462)
T 3guu_A 80 YRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYY 157 (462)
T ss_dssp EEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCE
Confidence 3455666765 78899999863 23589999999944321 111 111 245566 899999
Q ss_pred EEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC-CCCeEEEEEcChhHHHHHHHHhhC----CC-cee
Q 004141 569 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA-NPSKVTVVGGSHGGFLTTHLIGQA----PD-KFV 642 (771)
Q Consensus 569 Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-d~~ri~l~G~S~GG~~a~~~a~~~----p~-~~~ 642 (771)
|+++||+|.+ ..+. .+.....++.++++.+.....+ ...+++++|||+||..+++++... |+ .++
T Consensus 158 Vv~~Dy~G~G---~~y~------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 158 VVSSDHEGFK---AAFI------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp EEEECTTTTT---TCTT------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEecCCCCC---Cccc------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 9999999954 3221 1111122334444443333223 247999999999999999887754 33 588
Q ss_pred EEEecCCccchhhhhcCCCCC------------------c----------------------c--hhhhh---cc-CCCC
Q 004141 643 AAAARNPLCNLALMVGTTDIP------------------D----------------------W--CYVES---YG-SKGK 676 (771)
Q Consensus 643 ~~v~~~p~~~~~~~~~~~~~~------------------~----------------------~--~~~~~---~~-~~~~ 676 (771)
+++..++..++.......+.. + . |..+. +. ....
T Consensus 229 g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~ 308 (462)
T 3guu_A 229 GASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVF 308 (462)
T ss_dssp EEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGG
T ss_pred EEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHH
Confidence 899988888764332110000 0 0 10000 00 0000
Q ss_pred ccCCCCCC---hhhHHHHhhcCccc-----ccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc
Q 004141 677 DSFTESPS---VEDLTRFHSKSPIS-----HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 748 (771)
Q Consensus 677 ~~~~~~~~---~~~~~~~~~~sp~~-----~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 748 (771)
..+.+... ......+.+.+.-. -..+.++|+||+||.+|++||+++++++++++++.|.+++++.|++++|.
T Consensus 309 ~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~ 388 (462)
T 3guu_A 309 SLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHL 388 (462)
T ss_dssp GGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHH
T ss_pred HHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCcc
Confidence 01110000 00111111111101 12456799999999999999999999999999999999999999999997
Q ss_pred CCCCCChHHHHHHHHHHHHHhh
Q 004141 749 IERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 749 ~~~~~~~~~~~~~i~~fl~~~L 770 (771)
... ...+..+++||++++
T Consensus 389 ~~~----~~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 389 TAE----IFGLVPSLWFIKQAF 406 (462)
T ss_dssp HHH----HHTHHHHHHHHHHHH
T ss_pred Cch----hhhHHHHHHHHHHHh
Confidence 642 234678999999876
No 193
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.67 E-value=1e-15 Score=157.71 Aligned_cols=228 Identities=16% Similarity=0.193 Sum_probs=133.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
-+|..+++...- ..|.||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... ........
T Consensus 16 ~~g~~l~y~~~G--------~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~-~~~~~~~~ 80 (294)
T 1ehy_A 16 LPDVKIHYVREG--------AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRG---FGDSEKP-DLNDLSKY 80 (294)
T ss_dssp CSSCEEEEEEEE--------CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTT---STTSCCC-CTTCGGGG
T ss_pred ECCEEEEEEEcC--------CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCC---CCCCCCC-ccccccCc
Confidence 356777655432 23679999998765 45788888888765 9999999999 5555321 00000123
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccc-hh-hhhcCC-CCCcch------
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LA-LMVGTT-DIPDWC------ 666 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~-~~-~~~~~~-~~~~~~------ 666 (771)
.++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... .. ...... ....|.
T Consensus 81 ~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T 1ehy_A 81 SLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQL 158 (294)
T ss_dssp CHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTC
T ss_pred CHHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCc
Confidence 456666666666655 2356899999999999999999999999999999886321 10 000000 000010
Q ss_pred -hh---------------hhccCCCCccCCCCCChhhHHHHh-----------------hc--Cccc-----ccCCCCCc
Q 004141 667 -YV---------------ESYGSKGKDSFTESPSVEDLTRFH-----------------SK--SPIS-----HISKVKTP 706 (771)
Q Consensus 667 -~~---------------~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--sp~~-----~~~~i~~P 706 (771)
.. ..+....... ......+....+. .. .... .+.++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 237 (294)
T 1ehy_A 159 DMAVEVVGSSREVCKKYFKHFFDHWSYR-DELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLP 237 (294)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHTSSS-SCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSC
T ss_pred chhHHHhccchhHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCC
Confidence 00 0000000000 0000111111110 00 0001 23378999
Q ss_pred EEEEeeCCCCccCc-HHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 707 TIFLLGAQDLRVPV-SNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 707 ~lii~G~~D~~vp~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
+|+++|++|..+|. .....+.+.+ ...++++++++||..... ...++.+.+.+||
T Consensus 238 ~Lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 293 (294)
T 1ehy_A 238 VTMIWGLGDTCVPYAPLIEFVPKYY----SNYTMETIEDCGHFLMVE-KPEIAIDRIKTAF 293 (294)
T ss_dssp EEEEEECCSSCCTTHHHHHHHHHHB----SSEEEEEETTCCSCHHHH-CHHHHHHHHHHHC
T ss_pred EEEEEeCCCCCcchHHHHHHHHHHc----CCCceEEeCCCCCChhhh-CHHHHHHHHHHHh
Confidence 99999999999884 4444544433 348999999999976533 3446777777775
No 194
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.67 E-value=6.9e-17 Score=171.39 Aligned_cols=221 Identities=12% Similarity=0.112 Sum_probs=131.5
Q ss_pred CCcEEEEEcCCCCCCCC---Ccch-----------HHHHHHHHCCcEEEEECCCCCCCCChhhhhcC--CC---Ccc-cc
Q 004141 536 CDPLIVVLHGGPHSVSL---SSYS-----------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL--PG---KVG-SQ 595 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~---~~~~-----------~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~--~~---~~~-~~ 595 (771)
+.|+||++||++..... ..|. ..+..|+++||.|+++|+||. |.+..... .. .+. ..
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~ 125 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTH---YVPPFLKDRQLSFTANWGWST 125 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGG---GCCTTCCGGGGGGGTTCSHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCC---CCCCcccccccccccCCcHHH
Confidence 46899999997765320 0222 577889999999999999994 43321100 00 111 22
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchhhhhc-C--C-----------
Q 004141 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVG-T--T----------- 660 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~~~~~-~--~----------- 660 (771)
.++|+.++++++.++ .+.++++++|||+||.+++.++.++ |++++++|+.++......... . .
T Consensus 126 ~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (354)
T 2rau_A 126 WISDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAK 203 (354)
T ss_dssp HHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhh
Confidence 257888888888765 3457899999999999999999998 999999999865422100000 0 0
Q ss_pred ---------CCC------------------------cchhhhhccCCCCccCC-CCCChhhHH-HH------------hh
Q 004141 661 ---------DIP------------------------DWCYVESYGSKGKDSFT-ESPSVEDLT-RF------------HS 693 (771)
Q Consensus 661 ---------~~~------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~------------~~ 693 (771)
... .|.....+.......+. ......... .+ ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (354)
T 2rau_A 204 GIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLE 283 (354)
T ss_dssp TCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHT
T ss_pred cccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccC
Confidence 000 00000000000000000 000001111 11 11
Q ss_pred cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC--CCChHHHHHHHHHHHHHh
Q 004141 694 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 694 ~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~fl~~~ 769 (771)
.+....+.++++|+|+++|++|.++|. .++.+ ....++++++++||.... ++...++...+.+||+++
T Consensus 284 ~~~~~~l~~i~~P~Lii~G~~D~~~p~-~~~~l-------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 284 RDLKFDYEGILVPTIAFVSERFGIQIF-DSKIL-------PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp TTCCCCCTTCCCCEEEEEETTTHHHHB-CGGGS-------CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cccccccccCCCCEEEEecCCCCCCcc-chhhh-------ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 223345668999999999999997763 22222 235799999999997643 344568889999999875
No 195
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.67 E-value=1.6e-15 Score=145.29 Aligned_cols=171 Identities=12% Similarity=0.126 Sum_probs=121.7
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|.||++||.+.+.. ..|...+..+...+ +.++++| ++ ....+++.+.+..+++. .+
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~---~~v~~~~---~~------------~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHW---QRIRQRE---WY------------QADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTS---EECCCSC---CS------------SCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCe---EEEeccC---CC------------CcCHHHHHHHHHHHHHh--cC-
Confidence 4588999999875531 24444444333333 4556666 21 12356666666666655 23
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcC
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS 695 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 695 (771)
++++|+|||+||.+++.++.++|++++++|+.+|....... + +.
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------------~-----------~~----------- 117 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------------I-----------DD----------- 117 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT--------------C-----------TT-----------
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc--------------C-----------cc-----------
Confidence 78999999999999999999999999999999997643210 0 00
Q ss_pred cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC--CChHHHHHHHHHHHHHhh
Q 004141 696 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 696 p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~fl~~~L 770 (771)
...+.++++|+|+++|++|..+|++.++.+.+.+ +.+++++++++|.+... ....+.++.+.+||++..
T Consensus 118 -~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 118 -RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp -TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred -ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 0335678899999999999999999999988876 27899999999987542 133456688888887653
No 196
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.67 E-value=1.8e-16 Score=163.60 Aligned_cols=227 Identities=11% Similarity=0.063 Sum_probs=135.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.+++...+. ..|+||++||++.+ ...|...+..|++. |.|+++|+|| +|.+... ...
T Consensus 16 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~-----~~~ 76 (301)
T 3kda_A 16 EVDGVKLHYVKGG--------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPG---LGQSEPP-----KTG 76 (301)
T ss_dssp EETTEEEEEEEEE--------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTT---STTCCCC-----SSC
T ss_pred eeCCeEEEEEEcC--------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCC---CCCCCCC-----CCC
Confidence 3467778765543 34789999998765 34677788888877 9999999999 4444221 122
Q ss_pred cchhhHHHHHHHHHHcCCCCCCe-EEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcC------CCCCcchh
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT------TDIPDWCY 667 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~r-i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~------~~~~~~~~ 667 (771)
...+++.+.+..+++. ++.++ +.|+||||||.+++.++.++|++++++|+.+|.......... .....|..
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (301)
T 3kda_A 77 YSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHF 154 (301)
T ss_dssp SSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHH
T ss_pred ccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhH
Confidence 3455555555555544 23456 999999999999999999999999999999986321111000 00000100
Q ss_pred ---------hhhccC--------CCCccCCC---CCChhhHHHHhh-------------------------cCcccccCC
Q 004141 668 ---------VESYGS--------KGKDSFTE---SPSVEDLTRFHS-------------------------KSPISHISK 702 (771)
Q Consensus 668 ---------~~~~~~--------~~~~~~~~---~~~~~~~~~~~~-------------------------~sp~~~~~~ 702 (771)
...+.. ........ ....+....+.. ......+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (301)
T 3kda_A 155 SFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQ 234 (301)
T ss_dssp HHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBC
T ss_pred HHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccc
Confidence 000000 00000000 000111111000 000112238
Q ss_pred CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 703 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 703 i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+++|+|+++|++| +++.....+.+. -.++++++++++||.+.. +...++.+.|.+|+++.
T Consensus 235 i~~P~l~i~G~~D--~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 235 MPTMTLAGGGAGG--MGTFQLEQMKAY----AEDVEGHVLPGCGHWLPE-ECAAPMNRLVIDFLSRG 294 (301)
T ss_dssp SCEEEEEECSTTS--CTTHHHHHHHTT----BSSEEEEEETTCCSCHHH-HTHHHHHHHHHHHHTTS
T ss_pred cCcceEEEecCCC--CChhHHHHHHhh----cccCeEEEcCCCCcCchh-hCHHHHHHHHHHHHhhC
Confidence 8999999999999 665655554433 345899999999998753 34557788888888653
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=1.9e-15 Score=175.50 Aligned_cols=270 Identities=13% Similarity=0.102 Sum_probs=168.6
Q ss_pred ceEEEeCCCCCeEEEEecCCCC-CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...+.++|||++++|+++..+. ...+|.+. .++..+.+++...-..+. .....+++|||||++|||......
T Consensus 70 ~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~---~~~~~~~~~SPDG~~la~~~~~~G--- 143 (695)
T 2bkl_A 70 DSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG---TVSLGTWAVSWDGKKVAFAQKPNA--- 143 (695)
T ss_dssp CEECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS---CEEEEEEEECTTSSEEEEEEEETT---
T ss_pred ccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC---CEEEEEEEECCCCCEEEEEECCCC---
Confidence 3455667999999999987632 45678887 567777777653211000 012368999999999999876431
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.....|+++|+++|+..... .........++|||||+. |
T Consensus 144 ------------------------------------~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~----l 182 (695)
T 2bkl_A 144 ------------------------------------ADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKG----F 182 (695)
T ss_dssp ------------------------------------CSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSE----E
T ss_pred ------------------------------------CceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCE----E
Confidence 13479999999999875110 111222368999999999 9
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCC---CccccceeecCCCCEEEE
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~---~~~~~~p~~SpDG~~l~f 333 (771)
+|++...... +.....++..+||++++ .++.. +.+... .....++.|||||++|++
T Consensus 183 ~~~~~d~~~~--~~~~~~~~~~~v~~~~l-----------------~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 183 YYEWLPTDPS--IKVDERPGYTTIRYHTL-----------------GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp EEEECCCCTT--SCGGGGGGGCEEEEEET-----------------TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred EEEEecCCCC--CccccCCCCCEEEEEEC-----------------CCCchhceEEEecCCCCEEEEEEEECCCCCEEEE
Confidence 9998543200 00011134558999998 55442 233322 235678999999999999
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC-Ce
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-SS 412 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~-~~ 412 (771)
.+.+.. ...+||+++..+++.+.++.... ....+.| +||+ |++.++.+ ..
T Consensus 244 ~~~~~~-------~~~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 244 YILRGW-------SENDVYWKRPGEKDFRLLVKGVG--------------------AKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp EEEETT-------TEEEEEEECTTCSSCEEEEECSS--------------------CCEEEEE-ETTE-EEEEECTTCTT
T ss_pred EEeCCC-------CceEEEEEcCCCCceEEeecCCC--------------------ceEEEEe-cCCc-EEEEECCCCCC
Confidence 887641 25689999876655444332210 1122334 7888 88877644 46
Q ss_pred eEEEEEECCCCcE---EEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 413 QVIISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 413 ~~l~~~d~~tg~~---~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
..|+.+|+++++. +.+...........++..++.++++... +...+|++.++.
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~ 350 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLK-DATSEVRVATLK 350 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEE-TTEEEEEEEETT
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEE-CCEEEEEEEeCC
Confidence 7899999988763 6666543211222233346677766644 334668877753
No 198
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.66 E-value=1.1e-16 Score=162.90 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=131.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+...... ......++++.+.+..+++. ++.+
T Consensus 20 ~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~~~~-~~~~~~~~~~a~dl~~~l~~--l~~~ 90 (271)
T 1wom_A 20 KASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVG---SGHSDLRAYD-LNRYQTLDGYAQDVLDVCEA--LDLK 90 (271)
T ss_dssp SSEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSC---CSSSCCTTCC-TTGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCC---CCCCCCCccc-ccccccHHHHHHHHHHHHHH--cCCC
Confidence 3789999997654 3456666777755 79999999999 4544211100 01112344444444444444 2457
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh----hhcCCCCCcc-hhhhhccC-------CCCcc-CCCCC
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MVGTTDIPDW-CYVESYGS-------KGKDS-FTESP 683 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~----~~~~~~~~~~-~~~~~~~~-------~~~~~-~~~~~ 683 (771)
++.|+||||||.+++.++.++|++++++|+.++...... +......... ........ ..... +....
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPD 170 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTT
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999999999999887521100 0000000000 00000000 00000 00000
Q ss_pred ChhhHH----H---------------HhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 684 SVEDLT----R---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 684 ~~~~~~----~---------------~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
...... . .........+.++++|+|+++|++|..+|++.++.+.+.+. ..+++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 246 (271)
T 1wom_A 171 RPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP----YSSLKQMEA 246 (271)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS----SEEEEEEEE
T ss_pred chHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC----CCEEEEeCC
Confidence 000000 0 01112223467899999999999999999888777766554 378999999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+||..... ...++.+.+.+||++++
T Consensus 247 ~gH~~~~e-~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 247 RGHCPHMS-HPDETIQLIGDYLKAHV 271 (271)
T ss_dssp ESSCHHHH-CHHHHHHHHHHHHHHHC
T ss_pred CCcCcccc-CHHHHHHHHHHHHHhcC
Confidence 99976533 35578889999998764
No 199
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.66 E-value=1.2e-16 Score=164.54 Aligned_cols=230 Identities=15% Similarity=0.082 Sum_probs=137.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004141 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
-+|.+++...+. +.|+||++||++... ..|...+..|++ +|.|+++|+|| +|.+..... ......
T Consensus 15 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~~-~~~~~~ 79 (297)
T 2qvb_A 15 IAGKRMAYIDEG--------KGDAIVFQHGNPTSS--YLWRNIMPHLEG-LGRLVACDLIG---MGASDKLSP-SGPDRY 79 (297)
T ss_dssp ETTEEEEEEEES--------SSSEEEEECCTTCCG--GGGTTTGGGGTT-SSEEEEECCTT---STTSCCCSS-CSTTSS
T ss_pred ECCEEEEEEecC--------CCCeEEEECCCCchH--HHHHHHHHHHhh-cCeEEEEcCCC---CCCCCCCCC-ccccCc
Confidence 357777655542 248899999977653 346666667755 59999999999 444421110 011113
Q ss_pred chhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCC----------CCCc
Q 004141 596 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------DIPD 664 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~----------~~~~ 664 (771)
..+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|........... ..+.
T Consensus 80 ~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (297)
T 2qvb_A 80 SYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQ 157 (297)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhccc
Confidence 456666666555555 244 789999999999999999999999999999998865311000000 0000
Q ss_pred -c-------hhhhhc-c----CCC--------CccCCCC-CChhhHH-HHhhc--------------CcccccCCCCCcE
Q 004141 665 -W-------CYVESY-G----SKG--------KDSFTES-PSVEDLT-RFHSK--------------SPISHISKVKTPT 707 (771)
Q Consensus 665 -~-------~~~~~~-~----~~~--------~~~~~~~-~~~~~~~-~~~~~--------------sp~~~~~~i~~P~ 707 (771)
. .+...+ . ... ...+... ....... .+... +....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (297)
T 2qvb_A 158 GEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPK 237 (297)
T ss_dssp HHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCE
T ss_pred chhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccE
Confidence 0 000000 0 000 0000000 0000000 01111 1123456789999
Q ss_pred EEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 708 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 708 lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
|+++|++|..+|++..+.+.+.+ .. +++++ ++||.+.. +...++.+.+.+||++.
T Consensus 238 lii~G~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~-~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 238 LFINAEPGAIITGRIRDYVRSWP----NQ-TEITV-PGVHFVQE-DSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp EEEEEEECSSSCHHHHHHHHTSS----SE-EEEEE-EESSCGGG-TCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCHHHHHHHHHHc----CC-eEEEe-cCccchhh-hCHHHHHHHHHHHHHHH
Confidence 99999999999988777665544 23 78888 99998664 44568889999999875
No 200
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.66 E-value=2e-15 Score=157.02 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=79.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...-++ ..|.||++||+++...... ....+...||.|+++|+|| +|.+... .......
T Consensus 20 ~g~~l~y~~~G~~------~g~pvvllHG~~~~~~~~~---~~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 84 (313)
T 1azw_A 20 DRHTLYFEQCGNP------HGKPVVMLHGGPGGGCNDK---MRRFHDPAKYRIVLFDQRG---SGRSTPH---ADLVDNT 84 (313)
T ss_dssp SSCEEEEEEEECT------TSEEEEEECSTTTTCCCGG---GGGGSCTTTEEEEEECCTT---STTSBST---TCCTTCC
T ss_pred CCCEEEEEecCCC------CCCeEEEECCCCCccccHH---HHHhcCcCcceEEEECCCC---CcCCCCC---ccccccc
Confidence 5667765544321 2366999999765432211 2233445799999999999 5554321 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
.+++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++..
T Consensus 85 ~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 85 TWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 55666556666655 245689999999999999999999999999999987653
No 201
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.65 E-value=9.9e-16 Score=145.29 Aligned_cols=169 Identities=16% Similarity=0.094 Sum_probs=122.6
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCc---EEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
.|+||++||.+.. ...|...+..|+++|| .|+++|++|.+. +.. ...+++.+.+..+++. .
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~---s~~---------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTG---TNY---------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSCTTC---CHH---------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCCCCC---chh---------hhHHHHHHHHHHHHHH--c
Confidence 4779999997655 4467888899999998 699999999433 211 2345666666666554 2
Q ss_pred CCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHH
Q 004141 614 NPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 691 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (771)
+.+++.++||||||.+++.++.++ |++++++|+.+|....... . .+ +.
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------~--------~~---~~------- 116 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------K--------AL---PG------- 116 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------B--------CC---CC-------
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------c--------cC---CC-------
Confidence 457899999999999999999987 8899999999987542210 0 00 00
Q ss_pred hhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 692 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 692 ~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
. ....++|+|+++|++|..+|++.++ -...+++++++++|.+.... . ++.+.+.+||++.
T Consensus 117 --~-----~~~~~~p~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 --T-----DPNQKILYTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGG 176 (181)
T ss_dssp --S-----CTTCCCEEEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTT
T ss_pred --C-----CCccCCcEEEEecCCCccccccccc---------CCCCcceeeccCchHhhccC-H-HHHHHHHHHHhcc
Confidence 0 0123579999999999999987432 23468899999999876444 3 7888999998753
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=3e-15 Score=175.07 Aligned_cols=270 Identities=12% Similarity=0.114 Sum_probs=170.1
Q ss_pred ceEEEeCCCCCeEEEEecCCCC-CCeEEEEe-c---CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENE-SPIQFELW-S---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
...+.++|||++++|+++..+. ...+|.+. . ++..+.+++...-..+. +..+..++|||||++|||......
T Consensus 109 ~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDG~~la~~~~~~G 185 (741)
T 1yr2_A 109 ERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG---ATALDAWAASDDGRLLAYSVQDGG 185 (741)
T ss_dssp CEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEETT
T ss_pred cccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC---CEEEEeEEECCCCCEEEEEEcCCC
Confidence 4455667999999999986532 46678887 4 56667776653211100 012368999999999999876531
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
....+|+++|+++|+.... .........++|||| +.
T Consensus 186 ---------------------------------------~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~-- 221 (741)
T 1yr2_A 186 ---------------------------------------SDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DA-- 221 (741)
T ss_dssp ---------------------------------------CSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SE--
T ss_pred ---------------------------------------CceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CE--
Confidence 1236899999999987665 222223467899999 98
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCCC---ccccceeecCCCCE
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTESI---SSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~~---~~~~~p~~SpDG~~ 330 (771)
|+|++..... +.+.....++..+||++++ .++.. +.+.... ....++.|||||++
T Consensus 222 --l~~~~~~~~~-~~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 222 --LLYSRFAEPK-EGQAFQALNYNQTVWLHRL-----------------GTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp --EEEEECCCC---------CCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred --EEEEEecCcc-cccccccCCCCCEEEEEEC-----------------CCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 9998754321 1111122344568999998 44432 2232222 23678999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCC--C-CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTN--G-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
|+|.+.+.. ....+||++|+.++ + .+.++.... . . ...+++||+.|++.+
T Consensus 282 l~~~~~~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~~-----------~---------~-~~~~~~dg~~l~~~s 334 (741)
T 1yr2_A 282 VVITSSEGT------DPVNTVHVARVTNGKIGPVTALIPDLK-----------A---------Q-WDFVDGVGDQLWFVS 334 (741)
T ss_dssp EEEEEECTT------CSCCEEEEEEEETTEECCCEEEECSSS-----------S---------C-EEEEEEETTEEEEEE
T ss_pred EEEEEEccC------CCcceEEEEECCCCCCcccEEecCCCC-----------c---------e-EEEEeccCCEEEEEE
Confidence 999987641 12568999999876 3 333321110 0 1 112568999999988
Q ss_pred eeCC-eeEEEEEECCCC--cEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 408 IWGS-SQVIISVNVSSG--ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 408 ~~~~-~~~l~~~d~~tg--~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
+.+. ..+|+.+|++++ +.+.+...... ....++..++.++++.... .-.+|++.++.
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~ 394 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHD-AKSQVLAFDLD 394 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEEC-CEEEEEEEeCC
Confidence 7543 678999999884 56777655432 2233455577777766543 34567877753
No 203
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.65 E-value=2.3e-16 Score=159.79 Aligned_cols=218 Identities=15% Similarity=0.122 Sum_probs=130.9
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
.....|+||++||++.. ...|...+..|++ +|.|+++|+|| +|.+... .....++++.+.+..+++.
T Consensus 16 ~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~d~~G---~G~s~~~-----~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 16 APDARARLVCLPHAGGS--ASFFFPLAKALAP-AVEVLAVQYPG---RQDRRHE-----PPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp CTTCSEEEEEECCTTCC--GGGGHHHHHHHTT-TEEEEEECCTT---SGGGTTS-----CCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCCceEEEeCCCCCC--chhHHHHHHHhcc-CcEEEEecCCC---CCCCCCC-----CCCcCHHHHHHHHHHHHHh--
Confidence 34567999999997664 4567777888765 49999999999 6655321 1122455555555555544
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCc----eeEEEecCCccchhhhhcC-CCCCcchhhhhccCCC--CccCCCCCC-
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGT-TDIPDWCYVESYGSKG--KDSFTESPS- 684 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~~~v~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~- 684 (771)
.+.+++.|+|||+||.+++.++.++|++ ++++++.++.......... .......+...+.... .......+.
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 2457899999999999999999999986 8888887765321111000 0000000000000000 000000000
Q ss_pred --------hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004141 685 --------VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 685 --------~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
...........+.. ...+++|+|+++|++|..+|++..+.+.+.+.. +++++++++ +|.+... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~~-~~~ 236 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG---PADLRVLPG-GHFFLVD-QAA 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS---CEEEEEESS-STTHHHH-THH
T ss_pred HHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC---CceEEEecC-Cceeecc-CHH
Confidence 00000111111111 156889999999999999998877776655432 489999998 9976533 455
Q ss_pred HHHHHHHHHHHHh
Q 004141 757 ESFLNIGLWFKKY 769 (771)
Q Consensus 757 ~~~~~i~~fl~~~ 769 (771)
++.+.+.+||++.
T Consensus 237 ~~~~~i~~fl~~~ 249 (267)
T 3fla_A 237 PMIATMTEKLAGP 249 (267)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHhccc
Confidence 7778888888654
No 204
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.64 E-value=4.1e-16 Score=157.58 Aligned_cols=226 Identities=11% Similarity=0.106 Sum_probs=132.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.+++.....+ ...|+||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~-~~~~v~~~D~~G---~G~S~~~-----~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQD--HRLFKNLAPLLA-RDFHVICPDWRG---HDAKQTD-----SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCC--GGGGTTHHHHHT-TTSEEEEECCTT---CSTTCCC-----CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCc--HhHHHHHHHHHH-hcCcEEEEcccc---CCCCCCC-----ccccC
Confidence 466666554433 235789999997765 346777888885 459999999999 5554321 12234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccchh-----hhhcCCCCCcchh---
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLA-----LMVGTTDIPDWCY--- 667 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~~-----~~~~~~~~~~~~~--- 667 (771)
.+++.+.+..+++. .+.+++.|+||||||.+++.++.++ |++++++|+.+|..... .+........+..
T Consensus 70 ~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 3ibt_A 70 SQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQ 147 (264)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHH
Confidence 56666666555555 2456899999999999999999999 99999999998765110 0000000000100
Q ss_pred --hhhc-cCCC--------CccCCCCCChhhHH----HH-----hhcCcccccCCCCCcEEEEeeCCCC--ccCcHHHHH
Q 004141 668 --VESY-GSKG--------KDSFTESPSVEDLT----RF-----HSKSPISHISKVKTPTIFLLGAQDL--RVPVSNGLQ 725 (771)
Q Consensus 668 --~~~~-~~~~--------~~~~~~~~~~~~~~----~~-----~~~sp~~~~~~i~~P~lii~G~~D~--~vp~~~~~~ 725 (771)
...+ .... ...+... ...... .+ ...++...+.++++|+|+++|..|. .++++..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~ 226 (264)
T 3ibt_A 148 SFFDEWAETTDNADVLNHLRNEMPWF-HGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLE 226 (264)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHTGGGS-CHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHH
T ss_pred HHHHHhcccCCcHHHHHHHHHhhhhc-cchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHH
Confidence 0000 0000 0000000 000000 00 0112235567899999999864444 333444444
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 726 YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
+.+.+ ...++++++++||.... +...++.+.+.+||+
T Consensus 227 ~~~~~----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 227 FAAGH----SWFHPRHIPGRTHFPSL-ENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHC----TTEEEEECCCSSSCHHH-HCHHHHHHHHHHHTC
T ss_pred HHHhC----CCceEEEcCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 44433 34799999999997653 344567777877774
No 205
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.64 E-value=2.7e-16 Score=162.41 Aligned_cols=232 Identities=12% Similarity=0.078 Sum_probs=139.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++....+. +.|+||++||.+.. ...|...+..|++. |.|+++|+|| +|.+..... .....
T Consensus 15 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~~-~~~~~ 79 (302)
T 1mj5_A 15 EIKGRRMAYIDEG--------TGDPILFQHGNPTS--SYLWRNIMPHCAGL-GRLIACDLIG---MGDSDKLDP-SGPER 79 (302)
T ss_dssp EETTEEEEEEEES--------CSSEEEEECCTTCC--GGGGTTTGGGGTTS-SEEEEECCTT---STTSCCCSS-CSTTS
T ss_pred EECCEEEEEEEcC--------CCCEEEEECCCCCc--hhhhHHHHHHhccC-CeEEEEcCCC---CCCCCCCCC-CCccc
Confidence 3467777655442 14889999997765 33566666677654 8999999999 444421110 01111
Q ss_pred cchhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC-----------C
Q 004141 595 QDVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-----------I 662 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~-----------~ 662 (771)
...+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|............ .
T Consensus 80 ~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ 157 (302)
T ss_dssp SCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHST
T ss_pred ccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhcc
Confidence 3466666666666655 244 7899999999999999999999999999999988653110000000 0
Q ss_pred Ccc-------hhhhh-cc----CCC--------CccCCCC-CChhhHHHH-hhc--------------CcccccCCCCCc
Q 004141 663 PDW-------CYVES-YG----SKG--------KDSFTES-PSVEDLTRF-HSK--------------SPISHISKVKTP 706 (771)
Q Consensus 663 ~~~-------~~~~~-~~----~~~--------~~~~~~~-~~~~~~~~~-~~~--------------sp~~~~~~i~~P 706 (771)
... .+... +. ... ...+... ........+ ... .....+.++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 237 (302)
T 1mj5_A 158 AGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIP 237 (302)
T ss_dssp THHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSC
T ss_pred chhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCC
Confidence 000 00000 00 000 0000000 000000000 010 112346778999
Q ss_pred EEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 707 TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 707 ~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+|+++|++|..+|++.++.+.+.+ .. +++++ ++||.+... ...++.+.+.+|+++..
T Consensus 238 ~l~i~g~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~e-~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 238 KLFINAEPGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFIQED-SPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp EEEEEEEECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCGGGT-CHHHHHHHHHHHHHHHS
T ss_pred eEEEEeCCCCCCChHHHHHHHHhc----CC-ceEEe-cCcCccccc-CHHHHHHHHHHHHHhhc
Confidence 999999999999987776665443 23 78888 999986644 45688899999998653
No 206
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.7e-15 Score=151.22 Aligned_cols=205 Identities=17% Similarity=0.114 Sum_probs=126.2
Q ss_pred CCcEEEEEcCCCCCCCCCcch----HHHHHHHHCCcEEEEECCCCCCC------------------CChhhhhcCCCCcc
Q 004141 536 CDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSLG------------------FGEEALQSLPGKVG 593 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~----~~~~~la~~G~~Vv~~d~rG~~~------------------~g~~~~~~~~~~~~ 593 (771)
+.|.||++||.+.+. ..|. .....|.+.||.|+.+|+++... +|... .......
T Consensus 4 ~~~~vl~lHG~g~~~--~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~--~w~~~~~ 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNG--KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNR--AWFYHSE 79 (243)
T ss_dssp CCCEEEEECCTTCCH--HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCE--ESSCCCS
T ss_pred cCceEEEeCCCCccH--HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCc--ccccCCC
Confidence 468999999976552 2332 35566777799999999993211 11110 0000011
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCC------CceeEEEecCCccchhhhhcCCCCCcchh
Q 004141 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP------DKFVAAAARNPLCNLALMVGTTDIPDWCY 667 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p------~~~~~~v~~~p~~~~~~~~~~~~~~~~~~ 667 (771)
.....|+.++++++.+....+..+++|+||||||.+|+.++.+++ ..++++++.++........ ...
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---~~~---- 152 (243)
T 1ycd_A 80 ISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---EHP---- 152 (243)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---TST----
T ss_pred CcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---ccc----
Confidence 123456666666665532223468999999999999999988642 2466777766654221000 000
Q ss_pred hhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC---CCEEEEEeCC
Q 004141 668 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG---VETKVIVFPN 744 (771)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g---~~~~~~~~~~ 744 (771)
+. ... .. .+ ......+.++++|+|++||++|.++|+++++.+++.+...+ .....+++++
T Consensus 153 ----~~---~~~-----~~---~~--~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 215 (243)
T 1ycd_A 153 ----GE---LRI-----TE---KF--RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHP 215 (243)
T ss_dssp ----TC---EEE-----CG---GG--TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEES
T ss_pred ----cc---ccc-----ch---hH--HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecC
Confidence 00 000 00 00 01122345688999999999999999999999999998741 1123445667
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+||.+... ..+.+.+.+||+++++
T Consensus 216 ~gH~~~~~---~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 216 GGHMVPNK---KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp SSSSCCCC---HHHHHHHHHHHHHHHC
T ss_pred CCCcCCch---HHHHHHHHHHHHHhhh
Confidence 89987543 3588999999998764
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.64 E-value=1.3e-14 Score=168.13 Aligned_cols=265 Identities=9% Similarity=0.017 Sum_probs=171.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC----
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 121 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 121 (771)
.+++||||++|+|+.+... .....|+++++.++ +..+.+... .....++|| ||+.|+|++....
T Consensus 133 ~~~~SpDg~~lAy~~~~~G----~~~~~i~v~dl~tg--~~~~~~~~~-----~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAG----SDWREIHLMDVESK--QPLETPLKD-----VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp EEEECTTSSEEEEEEECSS----CCEEEEEEEETTTC--SEEEEEEEE-----EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred EEEECCCCCEEEEEEecCC----CceEEEEEEECCCC--CCCccccCC-----ceeccEEEe-CCCEEEEEEecCccccc
Confidence 3456899999999987532 34578899887433 333332221 114678999 9999999987642
Q ss_pred -----CCCeEEEEecC-Cc--ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCc
Q 004141 122 -----ESPIQFELWSQ-SQ--LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDK 193 (771)
Q Consensus 122 -----~~~~~~~~~~~-~~--~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (771)
...+++....+ +. .+.+....... +.++.++.|||||++|++.+....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~------------------ 256 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ------HHRYVGATVTEDDRFLLISAANST------------------ 256 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGG------CCSEEEEEECTTSCEEEEEEESSS------------------
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCC------CeEEEEEEEcCCCCEEEEEEccCC------------------
Confidence 23456655522 22 12333322101 112357899999999999765431
Q ss_pred cCCCCCCcccccCCcCcccCCccCceEEEEEccCC--ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeee
Q 004141 194 DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 271 (771)
Q Consensus 194 ~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g 271 (771)
....||++|++++ +.+.+ +........+ |++||++ |+|.++.+.
T Consensus 257 ----------------------~~~~i~~~d~~~~~~~~~~l--~~~~~~~~~~-~~~~g~~----l~~~t~~~~----- 302 (693)
T 3iuj_A 257 ----------------------SGNRLYVKDLSQENAPLLTV--QGDLDADVSL-VDNKGST----LYLLTNRDA----- 302 (693)
T ss_dssp ----------------------SCCEEEEEETTSTTCCCEEE--ECSSSSCEEE-EEEETTE----EEEEECTTC-----
T ss_pred ----------------------CCcEEEEEECCCCCCceEEE--eCCCCceEEE-EeccCCE----EEEEECCCC-----
Confidence 2368999999877 56777 3333333333 8999999 999986543
Q ss_pred eeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc---eecCCCCccccceeecCCCCEEEEEecCCCCCCCCcccc
Q 004141 272 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 348 (771)
Q Consensus 272 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~ 348 (771)
.+.+|+.+|+ +++.. +.|+.+..... .|||+|++|++...++ | .
T Consensus 303 ------~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~----g----~ 349 (693)
T 3iuj_A 303 ------PNRRLVTVDA-----------------ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD----A----T 349 (693)
T ss_dssp ------TTCEEEEEET-----------------TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET----T----E
T ss_pred ------CCCEEEEEeC-----------------CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC----C----e
Confidence 2348999998 55443 56666554443 9999999999998875 2 4
Q ss_pred ccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEE
Q 004141 349 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLR 427 (771)
Q Consensus 349 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~ 427 (771)
.+|++++++++..+.+..... ..+..+.+++|++.|++..+. .....||.+|+.+++.+.
T Consensus 350 ~~l~~~d~~g~~~~~l~~p~~-------------------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVALPGL-------------------GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EEEEEECTTSCEEEEECCSSS-------------------SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred eEEEEEECCCCeeEEeecCCC-------------------ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 679999988654332211100 012345678899988887653 344679999999999888
Q ss_pred ecCCC
Q 004141 428 ITPAE 432 (771)
Q Consensus 428 l~~~~ 432 (771)
+....
T Consensus 411 l~~~~ 415 (693)
T 3iuj_A 411 YRASA 415 (693)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87544
No 208
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.64 E-value=3.3e-16 Score=157.93 Aligned_cols=207 Identities=18% Similarity=0.176 Sum_probs=125.4
Q ss_pred EEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeE
Q 004141 539 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 618 (771)
Q Consensus 539 ~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri 618 (771)
.||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+... ....+++ .++.+.+. ++ +++
T Consensus 15 ~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G---~G~S~~~------~~~~~~~---~~~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPG---FGRSRGF------GALSLAD---MAEAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTT---STTCCSC------CCCCHHH---HHHHHHTT--SC-SSE
T ss_pred eEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCC---CCCCCCC------CCcCHHH---HHHHHHHH--hC-CCe
Confidence 79999997655 346777777775 589999999999 5554321 1223344 34445443 34 789
Q ss_pred EEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcc---hhh-----------hhccC-CCCc------
Q 004141 619 TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW---CYV-----------ESYGS-KGKD------ 677 (771)
Q Consensus 619 ~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~---~~~-----------~~~~~-~~~~------ 677 (771)
.|+||||||.+++.+|.++|++++++|+.++................ .+. ..+.. ....
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQ 156 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchh
Confidence 99999999999999999999999999988764211100000000000 000 00000 0000
Q ss_pred -------cC--CCCCChhhH----HHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 678 -------SF--TESPSVEDL----TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 678 -------~~--~~~~~~~~~----~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
.+ ...+..... ..+........+.++++|+|+++|++|..+|++.++.+.+.+. +.+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 232 (258)
T 1m33_A 157 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAK 232 (258)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT----TCEEEEETT
T ss_pred hHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc----cceEEEeCC
Confidence 00 000000000 0111222233567789999999999999999877666554432 468899999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHH
Q 004141 745 DVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+||..... ...++.+.+.+|+++
T Consensus 233 ~gH~~~~e-~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 233 AAHAPFIS-HPAEFCHLLVALKQR 255 (258)
T ss_dssp CCSCHHHH-SHHHHHHHHHHHHTT
T ss_pred CCCCcccc-CHHHHHHHHHHHHHh
Confidence 99986543 345788888899864
No 209
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.63 E-value=2.1e-13 Score=142.75 Aligned_cols=267 Identities=12% Similarity=0.093 Sum_probs=161.9
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcc-eEEEecCCcccccc
Q 004141 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVPQTVHGSV 149 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~g~~ 149 (771)
..+.++++.. ++.......+ .... .++|||||+++++..... ..++.++ ..+.. .+.........
T Consensus 20 ~~v~~~d~~~--~~~~~~~~~~----~~~~-~~~~s~dg~~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~--- 86 (331)
T 3u4y_A 20 RRISFFSTDT--LEILNQITLG----YDFV-DTAITSDCSNVVVTSDFC---QTLVQIETQLEPPKVVAIQEGQSSM--- 86 (331)
T ss_dssp TEEEEEETTT--CCEEEEEECC----CCEE-EEEECSSSCEEEEEESTT---CEEEEEECSSSSCEEEEEEECSSCC---
T ss_pred CeEEEEeCcc--cceeeeEEcc----CCcc-eEEEcCCCCEEEEEeCCC---CeEEEEECCCCceeEEecccCCCCc---
Confidence 4777776532 2333222222 1234 889999999887765532 3677777 45554 33333333331
Q ss_pred cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc
Q 004141 150 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 229 (771)
Q Consensus 150 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~ 229 (771)
.+++|||||++|+ ++.... ....|++||+.+++
T Consensus 87 ------~~~~~s~dg~~l~-~~~~~~----------------------------------------~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 87 ------ADVDITPDDQFAV-TVTGLN----------------------------------------HPFNMQSYSFLKNK 119 (331)
T ss_dssp ------CCEEECTTSSEEE-ECCCSS----------------------------------------SSCEEEEEETTTTE
T ss_pred ------cceEECCCCCEEE-EecCCC----------------------------------------CcccEEEEECCCCC
Confidence 2389999999988 432210 12489999999988
Q ss_pred eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce-eEEEecccccchhhhhhhhcCCCCCCc
Q 004141 230 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP 308 (771)
Q Consensus 230 ~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~ 308 (771)
.... .+.......++|+|||+. |++..... .. |++++++ ..+.
T Consensus 120 ~~~~--~~~~~~~~~~~~spdg~~----l~~~~~~~--------------~~~i~~~~~~----------------~~g~ 163 (331)
T 3u4y_A 120 FIST--IPIPYDAVGIAISPNGNG----LILIDRSS--------------ANTVRRFKID----------------ADGV 163 (331)
T ss_dssp EEEE--EECCTTEEEEEECTTSSC----EEEEEETT--------------TTEEEEEEEC----------------TTCC
T ss_pred eEEE--EECCCCccceEECCCCCE----EEEEecCC--------------CceEEEEEEC----------------CCCc
Confidence 7665 344445678999999998 87765221 13 6666652 2222
Q ss_pred c----eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCc
Q 004141 309 V----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 384 (771)
Q Consensus 309 ~----~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 384 (771)
. ..............|||||++|++..... ..|+++|+.+++.... +..+.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~d~~~~~~~~~-------~~~~~~---~--- 220 (331)
T 3u4y_A 164 LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG----------NSIGILETQNPENITL-------LNAVGT---N--- 220 (331)
T ss_dssp EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT----------TEEEEEECSSTTSCEE-------EEEEEC---S---
T ss_pred EeecCCccccCCCCccceEECCCCCEEEEEeCCC----------CeEEEEECCCCcccce-------eeeccC---C---
Confidence 1 12222333467889999999887766442 4699999887664110 011100 0
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC---C----CC---CceeeEEeecCCEEEEEEeCC
Q 004141 385 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP---A----ES---NFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 385 g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~---~----~~---~~~~~~~s~dg~~l~~~~~~~ 454 (771)
..+..++|+|||++|+++.. +...|+.+|+.+++++.+.. . .. ......|++||+.|+++....
T Consensus 221 ----~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 221 ----NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp ----SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred ----CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 13457889999998877643 44568889999998754421 1 11 112258999999988776432
Q ss_pred CCCCeEEEEEec
Q 004141 455 VDVPQVKYGYFV 466 (771)
Q Consensus 455 ~~p~~l~~~~~~ 466 (771)
..+.+.++.
T Consensus 295 ---~~v~v~d~~ 303 (331)
T 3u4y_A 295 ---RELKVFTIS 303 (331)
T ss_dssp ---TEEEEEETT
T ss_pred ---CcEEEEEec
Confidence 357776654
No 210
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.63 E-value=1.2e-15 Score=157.71 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=132.3
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC
Q 004141 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 611 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 611 (771)
.+..|.||++||.+.+ ...|...+..|+++ ||.|+++|+|| +|.+... ....++++.+.+..+.+..
T Consensus 33 ~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 33 RASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCC---Cccchhh------HHHHHHHHHHHHHHHhhcC
Confidence 3456789999997665 34688889999988 99999999999 5554311 1134667777777776653
Q ss_pred CCCCCeEEEEEcChhHHHHHHHHhhCCC-ceeEEEecCCccchhhh----h--cCCCCCcchhhh-hccC----CCCccC
Q 004141 612 LANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALM----V--GTTDIPDWCYVE-SYGS----KGKDSF 679 (771)
Q Consensus 612 ~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~~~v~~~p~~~~~~~----~--~~~~~~~~~~~~-~~~~----~~~~~~ 679 (771)
.+++.|+||||||.+++.++.++|+ +++++|+.++....... . ............ .+.. .....+
T Consensus 102 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T 1pja_A 102 ---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNY 178 (302)
T ss_dssp ---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGG
T ss_pred ---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhc
Confidence 4789999999999999999999999 79999998875432100 0 000000000000 0000 000000
Q ss_pred CCCCC-hhhH-------HHHhhcC-------cccccCCCCCcEEEEeeCCCCccCcHHHHHHHH----------------
Q 004141 680 TESPS-VEDL-------TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR---------------- 728 (771)
Q Consensus 680 ~~~~~-~~~~-------~~~~~~s-------p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~---------------- 728 (771)
...+. .... ..+.... ....+.+++ |+|+++|++|.++|++.++.+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 1pja_A 179 WHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVY 257 (302)
T ss_dssp BCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHH
T ss_pred ccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhh
Confidence 01111 0100 0000000 123467788 99999999999999988776632
Q ss_pred --------HHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 729 --------ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 729 --------~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
.+... .++++++++++||..... ....+.+.+.+||
T Consensus 258 ~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 301 (302)
T 1pja_A 258 LRDSFGLKTLLAR-GAIVRCPMAGISHTAWHS-NRTLYETCIEPWL 301 (302)
T ss_dssp HTTTTSHHHHHHT-TCEEEEECSSCCTTTTTS-CHHHHHHHTGGGC
T ss_pred hhhhhchhhHhhc-CCeEEEEecCcccccccc-CHHHHHHHHHHhc
Confidence 22222 248999999999986644 4446666666665
No 211
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.63 E-value=2.2e-14 Score=146.39 Aligned_cols=259 Identities=9% Similarity=0.063 Sum_probs=183.7
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC---------
Q 004141 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--------- 121 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--------- 121 (771)
.+|.+|.|+.... ...|+.++ .++...++|+.. ..--++|+|++|+|+....+
T Consensus 23 ~~g~~iy~~n~~d-------~~~ly~~~--~dg~~~~~l~~~---------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 23 ESDGEVFFSNTND-------NGRLYAMN--IDGSNIHKLSND---------TAMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EETTEEEEEEGGG-------TTEEEEEE--TTSCSCEEEEEE---------EEEEEEECSSEEEEEEECC------CCSS
T ss_pred EeCCEEEEEeCCC-------CceEEEEc--CCCCCCEEccCC---------ceeeEEEcCCEEEEEECCCCcccccceec
Confidence 3889999975421 25688855 466677777543 23466999999999987642
Q ss_pred -CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004141 122 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 122 -~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
....|+.+. ++++..+++.. .+..|+|+|++|+|.....
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~--------------~~~~~s~~g~~Iy~~~~~~------------------------- 125 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPD--------------PCIYASLIGNYIYYLHYDT------------------------- 125 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECS--------------CEEEEEEETTEEEEEEESS-------------------------
T ss_pred cCCCeEEEEeCCCCcceEeecC--------------CccEEEEeCCEEEEEeecC-------------------------
Confidence 145688888 55555555442 2457999999999975111
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCC
Q 004141 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
.....||++++++...++| +.... ..|+|+|+. |+|++. ..
T Consensus 126 ---------------~~~~~Iy~~~~dGs~~~~l--t~~~~----~~~~~~g~~----iy~t~~--------------g~ 166 (302)
T 3s25_A 126 ---------------QTATSLYRIRIDGEEKKKI--KNHYL----FTCNTSDRY----FYYNNP--------------KN 166 (302)
T ss_dssp ---------------SSCEEEEEEETTSCCCEEE--ESSCC----CCSEEETTE----EEEECT--------------TT
T ss_pred ---------------CCCceEEEEECCCCCeEEE--eCCCc----eEeeEECCE----EEEEeC--------------CC
Confidence 0347899999999888888 44432 346899999 999873 22
Q ss_pred ceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 280 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
.+||++++ +++..++|..... ..| ++|+|++|+|+.... ..+|++++++++
T Consensus 167 ~~Iy~~~l-----------------~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~---------~~~I~~~~ldG~ 217 (302)
T 3s25_A 167 GQLYRYDT-----------------ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR---------DNAIVHVNINNP 217 (302)
T ss_dssp CCEEEEET-----------------TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG---------TTEEEEECSSSC
T ss_pred ceEEEEEC-----------------CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC---------CcEEEEEECCCC
Confidence 38999998 7777777765322 345 459999999988653 268999999988
Q ss_pred CCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeE
Q 004141 360 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSL 439 (771)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~ 439 (771)
..+.++... .+.|+|+|++|+|..... ...|+++++++...++|.... ...
T Consensus 218 ~~~~Lt~~~------------------------~~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~~----~~~ 268 (302)
T 3s25_A 218 NPVVLTEAN------------------------IEHYNVYGSLIFYQRGGD-NPALCVVKNDGTGFKELAKGE----FCN 268 (302)
T ss_dssp CCEECSCSC------------------------EEEEEEETTEEEEEECSS-SCEEEEEETTSCCCEEEEESC----EEE
T ss_pred CeEEEeCCC------------------------cceEEECCCEEEEEECCC-CcEEEEEECCCCccEEeeCCc----cce
Confidence 876665332 134899999998876543 378999999988888887653 246
Q ss_pred EeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 440 LTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 440 ~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
+++.+++|+++..... .|++.++.
T Consensus 269 i~i~~d~Iy~td~~~~---~i~~~~~d 292 (302)
T 3s25_A 269 INVTSQYVYFTDFVSN---KEYCTSTQ 292 (302)
T ss_dssp EEECSSEEEEEETTTC---CEEEEESS
T ss_pred EEEeCCEEEEEECCCC---eEEEEECC
Confidence 7889999999874333 38877653
No 212
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.63 E-value=1.5e-15 Score=153.74 Aligned_cols=210 Identities=16% Similarity=0.209 Sum_probs=123.9
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... ....++++.+.+..+++...++..
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~G---hG~S~~~------~~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPG---HGTNPER------HCDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTT---CSSCC-------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCC---CCCCCCC------CccCHHHHHHHHHHHHHHhCcCCC
Confidence 4889999997765 4468888888876899999999999 5544321 012355666556555555323323
Q ss_pred eEEEEEcChhHHHHHH---HHhhCCCceeEEEecCCccchhhhh----cCCCCCcch----------hhhhccCCCCccC
Q 004141 617 KVTVVGGSHGGFLTTH---LIGQAPDKFVAAAARNPLCNLALMV----GTTDIPDWC----------YVESYGSKGKDSF 679 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~---~a~~~p~~~~~~v~~~p~~~~~~~~----~~~~~~~~~----------~~~~~~~~~~~~~ 679 (771)
++.|+||||||.+++. ++.++|++++++|+.++........ .......|. ....+.. ...+
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ--QAVF 162 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT--SGGG
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhh--hhhh
Confidence 4999999999999999 8888999999999887643210000 000000000 0000000 0000
Q ss_pred CCCCC--------------hhhHHHHh-h------cCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004141 680 TESPS--------------VEDLTRFH-S------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 680 ~~~~~--------------~~~~~~~~-~------~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
..... ......+. . ......+.++++|+|+++|++|..++ .+.+.+ . .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~--~~ 232 (264)
T 1r3d_A 163 SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS---G--LS 232 (264)
T ss_dssp TTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH---C--SE
T ss_pred hccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh---C--Cc
Confidence 00000 00000010 0 11223456789999999999997542 233332 1 56
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++++++||..... ...++.+.+.+|++++.
T Consensus 233 ~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 233 YSQVAQAGHNVHHE-QPQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEETTCCSCHHHH-CHHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCCchhhc-CHHHHHHHHHHHHHHhc
Confidence 88999999986543 34578899999998764
No 213
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.62 E-value=2.7e-15 Score=153.76 Aligned_cols=235 Identities=14% Similarity=0.157 Sum_probs=131.8
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH-----HHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~-----~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~ 589 (771)
..+|.+++...+-++ ....|+||++||.+.... ..|.. .+..|++ +|.|+++|+|| +|.+.... +
T Consensus 17 ~~~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G---~G~s~~~~-~ 86 (286)
T 2qmq_A 17 ETPYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPG---MEEGAPVF-P 86 (286)
T ss_dssp EETTEEEEEEEESCC----CTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTT---TSTTCCCC-C
T ss_pred ccCCeEEEEEeccCC----CCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhc-CCCEEEecCCC---CCCCCCCC-C
Confidence 345777876665432 124689999999766531 01332 5666755 69999999999 44322110 1
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh--------c-CC
Q 004141 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------G-TT 660 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~--------~-~~ 660 (771)
........+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......+. . ..
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 87 LGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTS 164 (286)
T ss_dssp TTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTS
T ss_pred CCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccc
Confidence 111001344444444444443 234689999999999999999999999999999999854221100 0 00
Q ss_pred CCCcchhhhhccCC-------C----CccCCCCCChhhHHHHh----hcCc----ccccCCCCCcEEEEeeCCCCccCcH
Q 004141 661 DIPDWCYVESYGSK-------G----KDSFTESPSVEDLTRFH----SKSP----ISHISKVKTPTIFLLGAQDLRVPVS 721 (771)
Q Consensus 661 ~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~----~~sp----~~~~~~i~~P~lii~G~~D~~vp~~ 721 (771)
..........+... . ...+...........+. .... ...+.++++|+|+++|++|..+| .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 00000000000000 0 00000000000001110 0011 13456889999999999999997 2
Q ss_pred HHHHHHHHHHhCCC-CEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004141 722 NGLQYARALREKGV-ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 722 ~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 767 (771)
. .+.+.+... ++++++++++||.+.... ..++.+.+.+||+
T Consensus 244 ~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 V----VECNSKLDPTQTSFLKMADSGGQPQLTQ-PGKLTEAFKYFLQ 285 (286)
T ss_dssp H----HHHHHHSCGGGEEEEEETTCTTCHHHHC-HHHHHHHHHHHHC
T ss_pred H----HHHHHHhcCCCceEEEeCCCCCcccccC-hHHHHHHHHHHhc
Confidence 2 233444333 589999999999865333 4577788888874
No 214
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.62 E-value=2.6e-15 Score=157.28 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=124.8
Q ss_pred CCcEEEEEcCCCCCCCC-CcchHHHHHHHHCCcEEEEECC----CCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHc
Q 004141 536 CDPLIVVLHGGPHSVSL-SSYSKSLAFLSSVGYSLLIVNY----RGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 610 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~-~~~~~~~~~la~~G~~Vv~~d~----rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 610 (771)
..|+||++||.+.+... ..|...+..| +.||.|+++|+ || +|.+.. ....+|+.+.++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G---~G~S~~--------~~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIG---SGPQDH--------AHDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTT---SCSCCH--------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCC---CCCccc--------cCcHHHHHHHHHHHHHH
Confidence 45789999996543222 2345566777 78999999965 66 554321 12367888888888775
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHh--hCCCceeEEEecCCccchhhhhcCCCCCc--ch----hhhhc---c--CCCC-
Q 004141 611 GLANPSKVTVVGGSHGGFLTTHLIG--QAPDKFVAAAARNPLCNLALMVGTTDIPD--WC----YVESY---G--SKGK- 676 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~--~~p~~~~~~v~~~p~~~~~~~~~~~~~~~--~~----~~~~~---~--~~~~- 676 (771)
.+.+++.|+||||||.+++.++. .+|++++++|+.+|...... ..... +. ....+ + ....
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPEN----PLFTPEGCAARKEHVEKLMAEGRGEDSLA 178 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTS----TTTSHHHHHHHHHHHHHHHHHTCTTCGGG
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchh----cccCHHHHHHHHHHHHHHhhccCcccccc
Confidence 35678999999999999999998 57999999999887643210 00000 00 00000 0 0000
Q ss_pred -ccCCCCCC-hhhH---------HH----Hh---hcCcccccCCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCCE
Q 004141 677 -DSFTESPS-VEDL---------TR----FH---SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 737 (771)
Q Consensus 677 -~~~~~~~~-~~~~---------~~----~~---~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 737 (771)
..+...+. .... .. .. ..+....+.++++|+|+++|++|.++|++.. ..+.+.+.+.-...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~ 258 (335)
T 2q0x_A 179 MLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCN 258 (335)
T ss_dssp GTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSS
T ss_pred chhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCcc
Confidence 00000000 0000 00 00 0112235678999999999999999998642 23344444322223
Q ss_pred E--------E-----EEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 738 K--------V-----IVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 738 ~--------~-----~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+ + ++++++|| +....+.+||++.
T Consensus 259 ~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 259 RVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp CEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 3 5 78999999 3478899999764
No 215
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.61 E-value=3.3e-16 Score=161.04 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=128.4
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||.+.......|...+..|+ .||.|+++|+|| +|.+.. .......++++.+.+..+++.. ..+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G---~G~S~~----~~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPN---SGYSPV----SNQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTT---STTSCC----CCCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCC---CCCCCC----CCcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997433322335666776675 699999999999 554431 1112234677777777766663 446
Q ss_pred eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchh---hhhccC---------CCCccCCCCCC
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY---VESYGS---------KGKDSFTESPS 684 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~ 684 (771)
++.|+||||||.+++.++.++|++++++|+.+|......+........... ...... ...........
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQ 190 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHH
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHH
Confidence 899999999999999999999999999999996543222111111000000 000000 00000000000
Q ss_pred h--------hhHHHHhhcCc---------------ccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004141 685 V--------EDLTRFHSKSP---------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 685 ~--------~~~~~~~~~sp---------------~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
. .....+....+ ...+.+ ++|+|+++|++|..++++ + .+.+.+. ..+ ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~----~~~-~~ 262 (292)
T 3l80_A 191 FKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHT----QTK-LI 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCT----TCE-EE
T ss_pred HHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCC----Cce-ee
Confidence 0 00000111111 123445 899999999999999877 4 5443332 356 89
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHhh
Q 004141 742 FPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
+++++|.+.. +...++.+.+.+||+++-
T Consensus 263 ~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 263 LCGQHHYLHW-SETNSILEKVEQLLSNHE 290 (292)
T ss_dssp ECCSSSCHHH-HCHHHHHHHHHHHHHTCT
T ss_pred eCCCCCcchh-hCHHHHHHHHHHHHHhcc
Confidence 9999997654 345578889999998764
No 216
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.61 E-value=1.5e-15 Score=162.72 Aligned_cols=212 Identities=11% Similarity=0.035 Sum_probs=139.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcE----EEEECCCCCCCCChhhhhcCCCCc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS----LLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~----Vv~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
.|..+..++|.|+++. .+++|+|+++||+.+... ..+...++.|+++|+. |+++|+++.. ++.. . ..
T Consensus 178 ~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~--~r~~-~-~~--- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAIDTT--HRAH-E-LP--- 248 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCSHH--HHHH-H-SS---
T ss_pred cCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCCCc--cccc-c-CC---
Confidence 4667889999998653 578999999999654221 1344567888888875 9999998621 1110 1 11
Q ss_pred cccchhhH--HHHHHHHHHcCC--CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004141 593 GSQDVNDV--LTAIDHVIDMGL--ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 593 ~~~~~~D~--~~~i~~l~~~~~--~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
......+. .+++.++.++.. .|+++++|+|+||||++++.++.++|++|+++++.+|.+.+....
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~----------- 317 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG----------- 317 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-----------
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-----------
Confidence 11122332 245566666532 578899999999999999999999999999999999986422110
Q ss_pred hhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc
Q 004141 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 748 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 748 (771)
.. +.......+.. . ......+|++|++|+.|..+ ..+++++++.|+++|+++++.++++ +|.
T Consensus 318 ----~~--------~~~~~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~ 379 (403)
T 3c8d_A 318 ----GQ--------QEGVLLEKLKA-G---EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHD 379 (403)
T ss_dssp ----SS--------SCCHHHHHHHT-T---SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred ----CC--------cHHHHHHHHHh-c---cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Confidence 00 00011111111 1 12345688999999998654 5789999999999999999999999 697
Q ss_pred CCCCCChHHHHHHHHHHHHHh
Q 004141 749 IERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 749 ~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+. .....+.+++.||.+.
T Consensus 380 ~~---~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 380 AL---CWRGGLMQGLIDLWQP 397 (403)
T ss_dssp HH---HHHHHHHHHHHHHHGG
T ss_pred HH---HHHHHHHHHHHHHhcc
Confidence 42 1234566777777654
No 217
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.61 E-value=2.8e-15 Score=156.22 Aligned_cols=227 Identities=14% Similarity=0.143 Sum_probs=131.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++... +.++.|.||++||.+.+ ...|...+..|++ .|.|+++|+|| +|.+... ......
T Consensus 29 ~g~~l~y~~~------G~g~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~via~Dl~G---hG~S~~~----~~~~~~ 92 (318)
T 2psd_A 29 LDSFINYYDS------EKHAENAVIFLHGNATS--SYLWRHVVPHIEP-VARCIIPDLIG---MGKSGKS----GNGSYR 92 (318)
T ss_dssp TTEEEEEEEC------CSCTTSEEEEECCTTCC--GGGGTTTGGGTTT-TSEEEEECCTT---STTCCCC----TTSCCS
T ss_pred CCeEEEEEEc------CCCCCCeEEEECCCCCc--HHHHHHHHHHhhh-cCeEEEEeCCC---CCCCCCC----CCCccC
Confidence 5666654432 22334689999997765 3456666777755 47999999999 5554321 112234
Q ss_pred hhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh-hhhcCCCCCc-c--------
Q 004141 597 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-LMVGTTDIPD-W-------- 665 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~-~~~~~~~~~~-~-------- 665 (771)
++++.+.+..+++. ++. +++.|+||||||.+++.+|.++|++++++|+.++..... .......... +
T Consensus 93 ~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
T 2psd_A 93 LLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEG 170 (318)
T ss_dssp HHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHH
T ss_pred HHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccc
Confidence 66666666666665 344 789999999999999999999999999999865432110 0000000000 0
Q ss_pred --------hhhhhcc-CCCCccC-----------CCCC-C-hhhHHHHhhcC----------------cccccCCC-CCc
Q 004141 666 --------CYVESYG-SKGKDSF-----------TESP-S-VEDLTRFHSKS----------------PISHISKV-KTP 706 (771)
Q Consensus 666 --------~~~~~~~-~~~~~~~-----------~~~~-~-~~~~~~~~~~s----------------p~~~~~~i-~~P 706 (771)
.+...+. ......+ ...+ . ......+.... ....+.++ ++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P 250 (318)
T 2psd_A 171 EKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLP 250 (318)
T ss_dssp HHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSC
T ss_pred hhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCC
Confidence 0000000 0000000 0000 0 00000000000 01124567 999
Q ss_pred EEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 707 TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 707 ~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
+|+++|++| .+++ .++.+.+.+. ..+++++ ++||... .+....+.+.|.+||++.
T Consensus 251 ~Lvi~G~~D-~~~~-~~~~~~~~~~----~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 251 KLFIESDPG-FFSN-AIVEGAKKFP----NTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp EEEEEEEEC-SSHH-HHHHHHTTSS----SEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHHH
T ss_pred eEEEEeccc-cCcH-HHHHHHHhCC----CcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHHh
Confidence 999999999 8876 5555554432 3677778 7799765 444668889999999865
No 218
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.40 E-value=5.1e-17 Score=167.81 Aligned_cols=220 Identities=13% Similarity=0.226 Sum_probs=124.5
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.+ ...|...+..|+ +||.|+++|+|| +|.+..............+++.+.+..+++. ++.
T Consensus 24 ~~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G---~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~--l~~ 95 (304)
T 3b12_A 24 SGPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRG---YGGSSKPVGAPDHANYSFRAMASDQRELMRT--LGF 95 (304)
Confidence 35789999997765 346777777887 799999999999 5544321100001122233333333333333 234
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhhcCCC-----------------CCcch-------hhhh-
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-----------------IPDWC-------YVES- 670 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~-----------------~~~~~-------~~~~- 670 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|............ ..... +...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGC 175 (304)
Confidence 6899999999999999999999999999999988654221100000 00000 0000
Q ss_pred cc-----------CCCCccCCCC---CC-hhh-HHHHhhc---C----cccccCCCCCcEEEEeeCCCCcc-CcHHHHHH
Q 004141 671 YG-----------SKGKDSFTES---PS-VED-LTRFHSK---S----PISHISKVKTPTIFLLGAQDLRV-PVSNGLQY 726 (771)
Q Consensus 671 ~~-----------~~~~~~~~~~---~~-~~~-~~~~~~~---s----p~~~~~~i~~P~lii~G~~D~~v-p~~~~~~~ 726 (771)
+. ......+... +. ... ...+... . ....+.++++|+|+++|++|..+ +......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 255 (304)
T 3b12_A 176 LFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVW 255 (304)
Confidence 00 0000000000 00 000 0000000 0 00115688999999999999655 44444444
Q ss_pred HHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHh
Q 004141 727 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 727 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 769 (771)
.+.+. ++++.++ ++||.+... ...++.+.|.+||++.
T Consensus 256 ~~~~~----~~~~~~i-~~gH~~~~e-~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 256 APRLA----NMRFASL-PGGHFFVDR-FPDDTARILREFLSDA 292 (304)
Confidence 44333 3677778 999987643 3457788899999764
No 219
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=3.8e-13 Score=140.79 Aligned_cols=258 Identities=9% Similarity=-0.013 Sum_probs=149.2
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceE-EEeCCCCCeEEEEecCCCCCC
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA-VVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~-~~~SPdG~~la~~~~~~~~~~ 124 (771)
....++||+.+++.... ...++.+++.........++.. ..... ++|||||++|+ +....++..
T Consensus 44 ~~~~s~dg~~l~~~~~~--------~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~-~~~~~~~~~ 108 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF--------CQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAV-TVTGLNHPF 108 (331)
T ss_dssp EEEECSSSCEEEEEEST--------TCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEE-ECCCSSSSC
T ss_pred eEEEcCCCCEEEEEeCC--------CCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEE-EecCCCCcc
Confidence 44457899877665432 2478887764332102233222 22345 89999999997 544332222
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004141 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.+++++ ..++..+.+...... ..+.|||||++|++.....
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 149 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDA----------VGIAISPNGNGLILIDRSS----------------------------- 149 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTE----------EEEEECTTSSCEEEEEETT-----------------------------
T ss_pred cEEEEECCCCCeEEEEECCCCc----------cceEECCCCCEEEEEecCC-----------------------------
Confidence 566655 455555544443333 4899999999877654321
Q ss_pred ccCCcCcccCCccCce-EEEEEccCCc-e----eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeecc
Q 004141 204 WEEDWGETYAGKRQPS-LFVININSGE-V----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 277 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~-l~v~d~~~~~-~----~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~ 277 (771)
.. |++|+++... + ... .+.......++|+|||+. |+++..
T Consensus 150 --------------~~~i~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~v~~~-------------- 195 (331)
T 3u4y_A 150 --------------ANTVRRFKIDADGVLFDTGQEF--ISGGTRPFNITFTPDGNF----AFVANL-------------- 195 (331)
T ss_dssp --------------TTEEEEEEECTTCCEEEEEEEE--ECSSSSEEEEEECTTSSE----EEEEET--------------
T ss_pred --------------CceEEEEEECCCCcEeecCCcc--ccCCCCccceEECCCCCE----EEEEeC--------------
Confidence 23 6666665322 2 122 233345678899999997 776652
Q ss_pred CCceeEEEecccccchhhhhhhhcCCCCCCcc---eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004141 278 RPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 278 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
....|+++|+ .+++. ............++|||||++|++.... ...|+++
T Consensus 196 ~~~~v~v~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~----------~~~i~~~ 248 (331)
T 3u4y_A 196 IGNSIGILET-----------------QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES----------TVDVFNF 248 (331)
T ss_dssp TTTEEEEEEC-----------------SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS----------EEEEEEE
T ss_pred CCCeEEEEEC-----------------CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC----------CCEEEEE
Confidence 2347889998 55553 2222234556789999999988765543 2458999
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004141 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
|+.+++...+..- ...+.. .. ........++|+|||++|+++....+ .+..+++.+..+..+..
T Consensus 249 d~~~~~~~~~~~~----~~~~~~--~~----~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 249 NQLSGTLSFVKSF----GHGLLI--DP----RPLFGANQMALNKTETKLFISANISR--ELKVFTISGKVVGYVAG 312 (331)
T ss_dssp ETTTTEEEEEEEE----ECCCCC--CC----GGGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTSCEEEECTT
T ss_pred ECCCCceeeeccc----cccccc--CC----CCcccccceEECCCCCEEEEecCCCC--cEEEEEecCCcccceec
Confidence 9887664222100 000000 00 00011235689999999887765444 45666887766666543
No 220
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.60 E-value=4.8e-15 Score=150.70 Aligned_cols=211 Identities=17% Similarity=0.141 Sum_probs=128.9
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCC-----hhhhhcC---
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFG-----EEALQSL--- 588 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g-----~~~~~~~--- 588 (771)
|.++..++|.|+++.+.+++|+|+++||+..... ......+.+++ .+..|+.+++++...+. .++....
T Consensus 24 ~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~--~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d~~~~~~~~ 101 (278)
T 2gzs_A 24 TRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR--LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESR 101 (278)
T ss_dssp SCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH--CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGT
T ss_pred CceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH--HHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccccCCCCccc
Confidence 6789999999998877788998877777432110 11223455554 68888989987532111 0110000
Q ss_pred -C-------CCccccchhhHHHHH-----HHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhh
Q 004141 589 -P-------GKVGSQDVNDVLTAI-----DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 589 -~-------~~~~~~~~~D~~~~i-----~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 655 (771)
+ .... ....++...+ .++.++..++++|++|+|+||||++++.++.+ |+.|+++++.+|...+..
T Consensus 102 ~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~ 179 (278)
T 2gzs_A 102 KTDLHSGRFSRKS-GGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGY 179 (278)
T ss_dssp TCSCC-----CCC-CCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTH
T ss_pred cccccccCcCCCc-CCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCc
Confidence 0 0000 0122222222 23334455788899999999999999999999 999999999998642210
Q ss_pred hhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCcc--------CcHHHHHHH
Q 004141 656 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV--------PVSNGLQYA 727 (771)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v--------p~~~~~~~~ 727 (771)
. .+. .......+. ..-..|+++.+|+.|..+ +..++++++
T Consensus 180 ~---------~~~--------------------~~~~~~~~~---~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~ 227 (278)
T 2gzs_A 180 D---------ALL--------------------SRVTAVEPL---QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTL 227 (278)
T ss_dssp H---------HHH--------------------HHHHTSCTT---TTTTCEEEEEECCC-----------CHHHHHHHHH
T ss_pred c---------hHH--------------------HHHHHhhcc---CCCCCcEEEEecCccccccccchhhhhHHHHHHHH
Confidence 0 000 000000000 112468999999999864 468899999
Q ss_pred HHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 728 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 728 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
++|++.|+++++.++|+++|.... ...+...+.||.+
T Consensus 228 ~~L~~~g~~~~~~~~~g~~H~~~~----~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 228 TILKDKGVNAVFWDFPNLGHGPMF----NASFRQALLDISG 264 (278)
T ss_dssp HHHHHTTCCEEEEECTTCCHHHHH----HHHHHHHHHHHTT
T ss_pred HHHHcCCCeeEEEEcCCCCccchh----HHHHHHHHHHHhh
Confidence 999999999999999999997431 1223445667653
No 221
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=1.1e-13 Score=145.09 Aligned_cols=261 Identities=11% Similarity=0.015 Sum_probs=155.6
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC-cccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|||||+++++.... ...++.++ ..++....+.... ..++ .....+.|||||++|++.......
T Consensus 36 ~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~-- 105 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNK---SESLVKIDLVTGETLGRIDLSTPEERV-----KSLFGAALSPDGKTLAIYESPVRL-- 105 (337)
T ss_dssp CCCEEECTTSSEEEEEETT---TTEEEEEETTTCCEEEEEECCBTTEEE-----ECTTCEEECTTSSEEEEEEEEEEE--
T ss_pred ccceEEcCCCCEEEEEeCC---CCeEEEEECCCCCeEeeEEcCCccccc-----ccccceEECCCCCEEEEEeccccc--
Confidence 5678999999998776542 23566666 4555544444322 0000 012589999999998886422100
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.++|. ......|+++|+.+++.... .+....+..++|||||+. |
T Consensus 106 --------------------------~~~~~----~~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 149 (337)
T 1pby_B 106 --------------------------ELTHF----EVQPTRVALYDAETLSRRKA--FEAPRQITMLAWARDGSK----L 149 (337)
T ss_dssp --------------------------CSSCE----EECCCEEEEEETTTTEEEEE--EECCSSCCCEEECTTSSC----E
T ss_pred --------------------------ccccc----cccCceEEEEECCCCcEEEE--EeCCCCcceeEECCCCCE----E
Confidence 00000 00237899999998877655 333445678899999998 8
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
++.+ ..|+++|+ .+++...............|+|||+.|++.....
T Consensus 150 ~~~~-----------------~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 195 (337)
T 1pby_B 150 YGLG-----------------RDLHVMDP-----------------EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp EEES-----------------SSEEEEET-----------------TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred EEeC-----------------CeEEEEEC-----------------CCCcEeeeeeccccCCCceeCCCccEEeeeccCC
Confidence 7762 16899998 6665443322222223458999999876554332
Q ss_pred CCC----------CC---CccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004141 339 SVD----------SG---AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 339 ~~~----------~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~ 405 (771)
... .| +......|+++|+.+++...+.... ....+..++|+|||++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI------------------MDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE------------------CSSCEEEEEECTTSSEEEE
T ss_pred CceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC------------------CCCceeeEEECCCCCEEEE
Confidence 100 00 0001125788888876542110000 0012235789999998876
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 406 SSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
. ...|+.+|+++++...............|++||+.|++.. ....|.+.++.++
T Consensus 258 ~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----~~~~i~v~d~~~~ 311 (337)
T 1pby_B 258 A-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG----ALGDLAAYDAETL 311 (337)
T ss_dssp E-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES----BSSEEEEEETTTC
T ss_pred e-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEc----CCCcEEEEECcCC
Confidence 6 2578899999988765543333345678999999887752 2466888887554
No 222
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=1.8e-13 Score=144.34 Aligned_cols=267 Identities=11% Similarity=0.114 Sum_probs=148.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+ |+++... ...+.++++++..+ ..+++... .........++|||||++|++..... +.-.+|.
T Consensus 47 ~spdg~-l~~~~~~------~~~~~v~~~~~~~g--~~~~~~~~--~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~v~~ 114 (347)
T 3hfq_A 47 LSAKDC-LYSVDKE------DDEGGIAAWQIDGQ--TAHKLNTV--VAPGTPPAYVAVDEARQLVYSANYHK-GTAEVMK 114 (347)
T ss_dssp ECTTCE-EEEEEEE------TTEEEEEEEEEETT--EEEEEEEE--EEESCCCSEEEEETTTTEEEEEETTT-TEEEEEE
T ss_pred EccCCe-EEEEEec------CCCceEEEEEecCC--cEEEeeee--ecCCCCCEEEEECCCCCEEEEEeCCC-CEEEEEE
Confidence 367998 5444321 12467888887432 33333321 11113466789999999997765432 3344555
Q ss_pred EecCCcceEEEecCCcccccc--cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004141 129 LWSQSQLEKEFHVPQTVHGSV--YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+..++....+........+.. ........++|||||+ |+.. ..
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~~--------------------------------- 159 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-DL--------------------------------- 159 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE-ET---------------------------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE-eC---------------------------------
Confidence 544444444433321110000 0001124689999999 5443 22
Q ss_pred CcCcccCCccCceEEEEEcc-CCceeecc--CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004141 207 DWGETYAGKRQPSLFVININ-SGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~-~~~~~~l~--~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
....|++|++. +++...+. ..+....+..++|||||+. |+++.. ....|+
T Consensus 160 ---------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~--------------~~~~v~ 212 (347)
T 3hfq_A 160 ---------GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY----AFLAGE--------------LSSQIA 212 (347)
T ss_dssp ---------TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred ---------CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE----EEEEeC--------------CCCEEE
Confidence 22578899987 56554331 0222335667899999997 766542 122455
Q ss_pred EEecccccchhhhhhhhcCCCCCCcceec---CCC------CccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004141 284 AVRVSLYKSEASELELKESSSEDLPVVNL---TES------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~l---t~~------~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
+++++. .+++.+.+ ... ......++|||||++|+...... ..|.++
T Consensus 213 v~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~----------~~v~v~ 267 (347)
T 3hfq_A 213 SLKYDT---------------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY----------NTLAVF 267 (347)
T ss_dssp EEEEET---------------TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT----------TEEEEE
T ss_pred EEEecC---------------CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC----------CEEEEE
Confidence 555521 23433221 111 12366789999999887665432 357777
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004141 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
++...+... .+..+.. .+ ..+..++|+|||++|++.....+...+|.+|.++|+++.+..
T Consensus 268 ~~~~~g~~~-------~~~~~~~--~~-------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 268 AVTADGHLT-------LIQQIST--EG-------DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp EECGGGCEE-------EEEEEEC--SS-------SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EECCCCcEE-------EeEEEec--CC-------CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 775322110 1111110 01 124567899999988877666678889999999999887653
No 223
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.56 E-value=1.2e-12 Score=136.83 Aligned_cols=265 Identities=11% Similarity=0.053 Sum_probs=165.5
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
++||+.|+... .+.+.+|++....... .+...........+...+|+|||+.|+.....+ .+.+
T Consensus 60 ~~~~~~l~~~~----------dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~ 123 (337)
T 1gxr_A 60 SNPTRHVYTGG----------KGCVKVWDISHPGNKS-PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-----TLSI 123 (337)
T ss_dssp CSSSSEEEEEC----------BSEEEEEETTSTTCCS-CSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-----EEEE
T ss_pred ecCCcEEEEcC----------CCeEEEEECCCCCcee-eeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEE
Confidence 56777777642 2467777775433211 111100011225588899999999998875543 3445
Q ss_pred e--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCC
Q 004141 130 W--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 207 (771)
Q Consensus 130 ~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 207 (771)
| ..++......... ..+ .+..+.|+|||+.|+..+.
T Consensus 124 ~d~~~~~~~~~~~~~~-~~~------~i~~~~~~~~~~~l~~~~~----------------------------------- 161 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTS-SAP------ACYALAISPDSKVCFSCCS----------------------------------- 161 (337)
T ss_dssp EECCCC--EEEEEEEC-SSS------CEEEEEECTTSSEEEEEET-----------------------------------
T ss_pred EECCCCCcceeeeccc-CCC------ceEEEEECCCCCEEEEEeC-----------------------------------
Confidence 5 2333222222211 111 1258999999998887643
Q ss_pred cCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEec
Q 004141 208 WGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 287 (771)
Q Consensus 208 ~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 287 (771)
...|++||+.+++..... ......+..+.|+|||+. |+..+ .+..|+++|+
T Consensus 162 ---------dg~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~~~d~ 212 (337)
T 1gxr_A 162 ---------DGNIAVWDLHNQTLVRQF-QGHTDGASCIDISNDGTK----LWTGG---------------LDNTVRSWDL 212 (337)
T ss_dssp ---------TSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET
T ss_pred ---------CCcEEEEeCCCCceeeee-ecccCceEEEEECCCCCE----EEEEe---------------cCCcEEEEEC
Confidence 257899999888765441 234456888999999987 77655 3347889998
Q ss_pred ccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004141 288 SLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
.+++..........+....|||||+.|+..+.+. .|+++|+.+++...+..
T Consensus 213 -----------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------~i~~~~~~~~~~~~~~~- 263 (337)
T 1gxr_A 213 -----------------REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS-----------NVEVLHVNKPDKYQLHL- 263 (337)
T ss_dssp -----------------TTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTSSCEEEECC-
T ss_pred -----------------CCCceEeeecCCCceEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCCeEEEcC-
Confidence 5555544444556688899999999998776542 48899987755321110
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEE
Q 004141 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNI 447 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l 447 (771)
....+..+.|+||++.|+ +...++ .|..+++.+++..........+....|+++++.|
T Consensus 264 -------------------~~~~v~~~~~~~~~~~l~-~~~~dg--~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 264 -------------------HESCVLSLKFAYCGKWFV-STGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYI 321 (337)
T ss_dssp -------------------CSSCEEEEEECTTSSEEE-EEETTS--EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEE
T ss_pred -------------------CccceeEEEECCCCCEEE-EecCCC--cEEEEECCCCeEEEEecCCCcEEEEEECCCCCEE
Confidence 011245678999999665 444444 4555688888777555444455667889999877
Q ss_pred EEEEe
Q 004141 448 IAVSS 452 (771)
Q Consensus 448 ~~~~~ 452 (771)
+....
T Consensus 322 ~~~~~ 326 (337)
T 1gxr_A 322 VTGSG 326 (337)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 66553
No 224
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.56 E-value=5.7e-13 Score=141.45 Aligned_cols=269 Identities=13% Similarity=0.052 Sum_probs=150.2
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC--CCCeEEEEec-CCcceEEEecCCccccc
Q 004141 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--ESPIQFELWS-QSQLEKEFHVPQTVHGS 148 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 148 (771)
..++++.++...++..+++.. ........+|||||++|++.....+ +.-.+|.+.. ++..+.+........
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-- 100 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-- 100 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS--
T ss_pred CCEEEEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC--
Confidence 456666665555554444322 1234566899999999988776521 3334466663 355555544321110
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004141 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
....+++ ||++|+..... ...+.+|++...
T Consensus 101 -----~p~~~~~--dg~~l~~~~~~-------------------------------------------~~~v~~~~~~~~ 130 (361)
T 3scy_A 101 -----DPCYLTT--NGKNIVTANYS-------------------------------------------GGSITVFPIGQD 130 (361)
T ss_dssp -----CEEEEEE--CSSEEEEEETT-------------------------------------------TTEEEEEEBCTT
T ss_pred -----CcEEEEE--CCCEEEEEECC-------------------------------------------CCEEEEEEeCCC
Confidence 0024455 89877765321 256777777543
Q ss_pred -ceeecc---CCCC---------CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhh
Q 004141 229 -EVQAVK---GIPK---------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 295 (771)
Q Consensus 229 -~~~~l~---~~~~---------~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 295 (771)
.+..+. .... ...+..++|||||+. |++... ....|++++++.
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~--------------~~~~v~v~~~~~------ 186 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY----LLADDL--------------GTDQIHKFNINP------ 186 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE----EEEEET--------------TTTEEEEEEECT------
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE----EEEEeC--------------CCCEEEEEEEcC------
Confidence 222210 0000 112356899999997 776652 122566666521
Q ss_pred hhhhhcCCCCCC----c-c-------eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004141 296 ELELKESSSEDL----P-V-------VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 296 ~~~~~~~~~~~~----~-~-------~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.++ + . ............++|||||++|++..... ..|.++++.++....
T Consensus 187 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 187 ---------NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----------GTVIAFRYADGMLDE 247 (361)
T ss_dssp ---------TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------CEEEEEEEETTEEEE
T ss_pred ---------CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----------CeEEEEEecCCceEE
Confidence 222 2 1 11122333467899999999887766432 358888877554311
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEEecC--CCCCceeeEE
Q 004141 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITP--AESNFSWSLL 440 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~l~~--~~~~~~~~~~ 440 (771)
+. .+.... ..+. ....++|||||++|+++... .+...+|.++..+|+++.+.. .........|
T Consensus 248 ~~-------~~~~~~--~~~~-----~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~ 313 (361)
T 3scy_A 248 IQ-------TVAADT--VNAQ-----GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFII 313 (361)
T ss_dssp EE-------EEESCS--SCCC-----CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEE
T ss_pred eE-------EEecCC--CCCC-----CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEE
Confidence 10 000000 1111 12367899999988776655 567788888777887665432 1223455789
Q ss_pred eecCCEEEEEEeC
Q 004141 441 TLDGDNIIAVSSS 453 (771)
Q Consensus 441 s~dg~~l~~~~~~ 453 (771)
+|||++|++....
T Consensus 314 spdg~~l~~~~~~ 326 (361)
T 3scy_A 314 TPNGKYLLVACRD 326 (361)
T ss_dssp CTTSCEEEEEETT
T ss_pred CCCCCEEEEEECC
Confidence 9999988876643
No 225
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.56 E-value=9.7e-15 Score=148.73 Aligned_cols=228 Identities=14% Similarity=0.139 Sum_probs=129.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++... +. +...|+||++||.+.+ ...|...+..|+ .+|.|+++|+|| ||.+... . ....
T Consensus 12 ~g~~l~y~~~-~~----G~~~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrG---hG~S~~~--~---~~~~ 75 (276)
T 2wj6_A 12 FDNKLSYIDN-QR----DTDGPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRG---HGLSPSE--V---PDFG 75 (276)
T ss_dssp TTEEEEEEEC-CC----CCSSCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTT---CSSSCCC--C---CCCC
T ss_pred CCeEEEEEEe-cC----CCCCCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCC---CCCCCCC--C---CCCC
Confidence 4666765443 11 1234789999997765 446888888886 579999999999 5555321 1 1223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-CCceeEEEecCCccch-----h-hhhcCCCCCcch---
Q 004141 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNL-----A-LMVGTTDIPDWC--- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~~~v~~~p~~~~-----~-~~~~~~~~~~~~--- 666 (771)
++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.... . .+........|.
T Consensus 76 ~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T 2wj6_A 76 YQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGT 153 (276)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHH
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHH
Confidence 45555444444443 2346899999999999999999999 9999999998753210 0 000000000110
Q ss_pred --hhhhccCCC---------CccCCCCCChhhH----H----HHh-hcCcccccCCCCCcEEEEeeCCCCccC--cHHHH
Q 004141 667 --YVESYGSKG---------KDSFTESPSVEDL----T----RFH-SKSPISHISKVKTPTIFLLGAQDLRVP--VSNGL 724 (771)
Q Consensus 667 --~~~~~~~~~---------~~~~~~~~~~~~~----~----~~~-~~sp~~~~~~i~~P~lii~G~~D~~vp--~~~~~ 724 (771)
....+.... ...... ...... . .+. ..++...+.++++|+++++|..|...+ .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~ 232 (276)
T 2wj6_A 154 HGLFDVWLDGHDEKRVRHHLLEEMAD-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINS 232 (276)
T ss_dssp HHHHHHHHTTBCCHHHHHHHHTTTTT-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHH
T ss_pred HHHHHHhhcccchHHHHHHHHHHhhh-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHH
Confidence 000000000 000000 000000 0 000 012234567789999998874443322 12223
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004141 725 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
.+.+. -...+++++|++||....+ ....+...+.+||++
T Consensus 233 ~~~~~----~p~a~~~~i~~~gH~~~~e-~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 233 DFAEQ----HPWFSYAKLGGPTHFPAID-VPDRAAVHIREFATA 271 (276)
T ss_dssp HHHHH----CTTEEEEECCCSSSCHHHH-SHHHHHHHHHHHHHH
T ss_pred HHHhh----CCCeEEEEeCCCCCccccc-CHHHHHHHHHHHHhh
Confidence 33332 2348999999999976543 455788899999975
No 226
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.56 E-value=3.7e-13 Score=144.48 Aligned_cols=245 Identities=11% Similarity=0.104 Sum_probs=158.6
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
...++||+.|+++... .+.|+++++.. ++..+..... ..+...+|||||++|++....+ ..+
T Consensus 37 ~~~s~dg~~l~~~~~~--------d~~i~v~d~~~--~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~---~~v 98 (391)
T 1l0q_A 37 AVISPDGTKVYVANAH--------SNDVSIIDTAT--NNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS---STL 98 (391)
T ss_dssp EEECTTSSEEEEEEGG--------GTEEEEEETTT--TEEEEEEECS-----SSEEEEEECTTSSEEEEEETTT---TEE
T ss_pred EEECCCCCEEEEECCC--------CCeEEEEECCC--CeEEEEEECC-----CCccceEECCCCCEEEEEECCC---CEE
Confidence 3457799888665422 24777777632 2332222222 3577899999999998765432 235
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004141 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
++++ ..++....+...... ..++|+|||++|++...
T Consensus 99 ~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~~~--------------------------------- 135 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKSP----------LGLALSPDGKKLYVTNN--------------------------------- 135 (391)
T ss_dssp EEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEET---------------------------------
T ss_pred EEEECCCCeEEEEEeCCCCc----------ceEEECCCCCEEEEEeC---------------------------------
Confidence 5544 444444444433333 58999999999877643
Q ss_pred CCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 206 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
....|++||+.+++.... ......+..+.|+|||+. |++++. ....|+++
T Consensus 136 ----------~~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~dg~~----l~~~~~--------------~~~~v~~~ 185 (391)
T 1l0q_A 136 ----------GDKTVSVINTVTKAVINT--VSVGRSPKGIAVTPDGTK----VYVANF--------------DSMSISVI 185 (391)
T ss_dssp ----------TTTEEEEEETTTTEEEEE--EECCSSEEEEEECTTSSE----EEEEET--------------TTTEEEEE
T ss_pred ----------CCCEEEEEECCCCcEEEE--EecCCCcceEEECCCCCE----EEEEeC--------------CCCEEEEE
Confidence 236899999999887666 344445678999999997 766542 23479999
Q ss_pred ecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004141 286 RVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
|+ .+++..........+....|+|||++|+....+. ....|+++|+.+++....
T Consensus 186 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~--------~~~~v~~~d~~~~~~~~~- 239 (391)
T 1l0q_A 186 DT-----------------VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK--------YFNTVSMIDTGTNKITAR- 239 (391)
T ss_dssp ET-----------------TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS--------SCCEEEEEETTTTEEEEE-
T ss_pred EC-----------------CCCeEEEEEecCCCccceEECCCCCEEEEEecCc--------CCCcEEEEECCCCeEEEE-
Confidence 98 6665554444455677899999999988877521 135699999877643111
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004141 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
+... ..+..++|+|||+.|+++...++ .+..+|+.++++....
T Consensus 240 ---------~~~~----------~~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 240 ---------IPVG----------PDPAGIAVTPDGKKVYVALSFXN--TVSVIDTATNTITATM 282 (391)
T ss_dssp ---------EECC----------SSEEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEEE
T ss_pred ---------EecC----------CCccEEEEccCCCEEEEEcCCCC--EEEEEECCCCcEEEEE
Confidence 1000 01235689999998877765444 5666798888866543
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.55 E-value=5.8e-13 Score=152.05 Aligned_cols=313 Identities=16% Similarity=0.119 Sum_probs=179.7
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
||||+.|+|... ..+.++++... .....++.. ...+...+|||||++||..+... ...+
T Consensus 27 spdg~~l~~~~~----------~~v~l~~~~~~-~~~~~~~~h-----~~~v~~~~~spdg~~lasg~~d~-----~v~l 85 (611)
T 1nr0_A 27 TPAGDKIQYCNG----------TSVYTVPVGSL-TDTEIYTEH-----SHQTTVAKTSPSGYYCASGDVHG-----NVRI 85 (611)
T ss_dssp CTTSSEEEEEET----------TEEEEEETTCS-SCCEEECCC-----SSCEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred CCCCCEEEeCCC----------CEEEEecCCCc-ccCeEecCC-----CCceEEEEECCCCcEEEEEeCCC-----CEEE
Confidence 789999998642 14555555322 222223222 25688899999999999876543 5667
Q ss_pred ec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC--CCCCccCCCCCCCCCCccCCCCCCccccc
Q 004141 130 WS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP--SKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 130 ~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
|+ .++......+. ...+. +..++|||||+.|+..+..... ....|+. .........+......+.|.
T Consensus 86 Wd~~~~~~~~~~~~~-~~~~~------v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~ 156 (611)
T 1nr0_A 86 WDTTQTTHILKTTIP-VFSGP------VKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFK 156 (611)
T ss_dssp EESSSTTCCEEEEEE-CSSSC------EEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEEC
T ss_pred eECCCCcceeeEeec-ccCCc------eEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEEC
Confidence 73 22222221111 11122 2699999999999987754321 1112221 11112233344455567788
Q ss_pred CCcCc-ccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004141 206 EDWGE-TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 206 ~d~g~-~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
++... .+++..+..|.+||..+++..... ......+..++|||||+. |+..+ .+..|.+
T Consensus 157 p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~----las~s---------------~D~~i~l 216 (611)
T 1nr0_A 157 PSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSL----FASTG---------------GDGTIVL 216 (611)
T ss_dssp SSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEE
T ss_pred CCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCCE----EEEEE---------------CCCcEEE
Confidence 88553 556667789999998877654431 334456889999999997 77665 2346888
Q ss_pred EecccccchhhhhhhhcCCCCCCcc-eecC-------CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004141 285 VRVSLYKSEASELELKESSSEDLPV-VNLT-------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt-------~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
+|+ .+++. ..+. .+...+...+|||||++|+..+.+. .|.+||+
T Consensus 217 wd~-----------------~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----------~v~lWd~ 268 (611)
T 1nr0_A 217 YNG-----------------VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----------TIKIWNV 268 (611)
T ss_dssp EET-----------------TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----------EEEEEET
T ss_pred EEC-----------------CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----------eEEEEeC
Confidence 887 44433 2332 4566788999999999998777653 4778887
Q ss_pred CCCCCCCCcc----------------------ceeeEEecccccCCC---CCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004141 357 PTNGNFSSLE----------------------KIVDVIPVVQCAEGD---CFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 357 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~ 411 (771)
.+++...... ..+..+.++...... .+.| +...+..++|+|||+.| ++...++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l-~s~s~D~ 346 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTL-FSADAEG 346 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEE-EEEETTS
T ss_pred CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEE-EEEeCCC
Confidence 7654321000 000011111110000 0001 11234568899999966 4555555
Q ss_pred eeEEEEEECCCCcEEEecCC--CCCceeeEEeecC
Q 004141 412 SQVIISVNVSSGELLRITPA--ESNFSWSLLTLDG 444 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~dg 444 (771)
...+ +|+.+++...+... ...+....+++++
T Consensus 347 ~v~~--Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 347 HINS--WDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp CEEE--EETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred cEEE--EECCCCceeeecccCCcceEEEEEECCCC
Confidence 5444 58888887665422 2233444566544
No 228
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.55 E-value=2.1e-12 Score=135.45 Aligned_cols=243 Identities=15% Similarity=0.118 Sum_probs=139.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.....+|||||++|++..... +.-.+|.+. .++....+...... + ....++|||||++|++....
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~s~dg~~l~~~~~~----- 104 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESALP--G------SLTHISTDHQGQFVFVGSYN----- 104 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEECS--S------CCSEEEECTTSSEEEEEETT-----
T ss_pred CCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeeccccccC--C------CCcEEEEcCCCCEEEEEecC-----
Confidence 466789999999998776542 333344444 24454444333211 0 12589999999988776432
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccC---CceeeccCCCCCCccceEEEecCCCCCc
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS---GEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~---~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
...|++||+.. ++.... ......+..++|+|||+.
T Consensus 105 --------------------------------------~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~-- 142 (343)
T 1ri6_A 105 --------------------------------------AGNVSVTRLEDGLPVGVVDV--VEGLDGCHSANISPDNRT-- 142 (343)
T ss_dssp --------------------------------------TTEEEEEEEETTEEEEEEEE--ECCCTTBCCCEECTTSSE--
T ss_pred --------------------------------------CCeEEEEECCCCcccccccc--ccCCCCceEEEECCCCCE--
Confidence 25688888843 333333 333345778899999997
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cccee-----cCC-CCccccceeecCCC
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-----LTE-SISSAFFPRFSPDG 328 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-----lt~-~~~~~~~p~~SpDG 328 (771)
|++... ....|+++|+ .+ ++... +.. .........|+|||
T Consensus 143 --l~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 143 --LWVPAL--------------KQDRICLFTV-----------------SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp --EEEEEG--------------GGTEEEEEEE-----------------CTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred --EEEecC--------------CCCEEEEEEe-----------------cCCCceeeecccccccCCCCCcceEEECCCC
Confidence 765541 1236888887 33 44332 221 22345678899999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCC--CCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEE
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~ 406 (771)
++|++..... ..|.++++.. +....+ ....... ..+.+ ......++|+|||+.|+++
T Consensus 190 ~~l~~~~~~~----------~~i~~~~~~~~~g~~~~~-----~~~~~~~----~~~~~--~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 190 QYAYCVNELN----------SSVDVWELKDPHGNIECV-----QTLDMMP----ENFSD--TRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp SEEEEEETTT----------TEEEEEESSCTTSCCEEE-----EEEECSC----TTCCS--CCCEEEEEECTTSSEEEEE
T ss_pred CEEEEEeCCC----------CEEEEEEecCCCCcEEEE-----eeccccC----ccccc--cCCccceEECCCCCEEEEE
Confidence 9887776432 3578888753 322110 0011000 00100 0012257899999988776
Q ss_pred eeeCCeeEEEEEECCCCcEEEec--CCCCCceeeEEeecCCEEEEEEe
Q 004141 407 SIWGSSQVIISVNVSSGELLRIT--PAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 407 ~~~~~~~~l~~~d~~tg~~~~l~--~~~~~~~~~~~s~dg~~l~~~~~ 452 (771)
...++...+|.++..+++.+.+. ..........|+++|+.|++...
T Consensus 249 ~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 249 DRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp ETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred ecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC
Confidence 65556556665554466555442 12222455789999998876553
No 229
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=2.2e-12 Score=136.05 Aligned_cols=248 Identities=12% Similarity=0.096 Sum_probs=157.5
Q ss_pred ceEEEeCCCCCeEEEEecCCC---CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
...++|||||++|++...... ....++.++ ..++..+.+...... ..+.|||||++|++....
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--- 109 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP----------FGATINNTTQTLWFGNTV--- 109 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC----------CSEEEETTTTEEEEEETT---
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc----------ceEEECCCCCEEEEEecC---
Confidence 567899999999966654321 134566666 555655555554433 489999999988775332
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC--------ccceEEEe
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL--------SVGQVVWA 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~--------~~~~~~ws 248 (771)
...|+++|+++++........... .+..++|+
T Consensus 110 ----------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 149 (353)
T 3vgz_A 110 ----------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD 149 (353)
T ss_dssp ----------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE
T ss_pred ----------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEEC
Confidence 258999999988864431111111 25678999
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCC
Q 004141 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPD 327 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpD 327 (771)
|||+. |++..+. ....|+.+|+ .+++...... .........||||
T Consensus 150 ~dg~~----l~~~~~~-------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 150 DATNT----VYISGIG-------------KESVIWVVDG-----------------GNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TTTTE----EEEEEES-------------SSCEEEEEET-----------------TTTEEEEEECCCCTTCCCCEEETT
T ss_pred CCCCE----EEEEecC-------------CCceEEEEcC-----------------CCCceEEEecCCCCccceEEECCC
Confidence 99997 7666521 2347999998 6665544333 3444778899999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
|++|++.... ..|+++|+.+++.... +........ .....++|+|||+.|++..
T Consensus 196 g~~l~~~~~~-----------~~i~~~d~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 196 GKRLYTTNAD-----------GELITIDTADNKILSR----------KKLLDDGKE-----HFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTEEEEECTT-----------SEEEEEETTTTEEEEE----------EECCCSSSC-----CCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCC-----------CeEEEEECCCCeEEEE----------EEcCCCCCC-----cccceEEECCCCCEEEEEe
Confidence 9998776542 3588999887653211 111000000 0123468999999887665
Q ss_pred eeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 408 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
. ....|+.+|+.+++......... .....|+++|+.++++.... ..+++.+..+
T Consensus 250 ~--~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~ 303 (353)
T 3vgz_A 250 S--KAAEVLVVDTRNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQA---GKVSVIDAKS 303 (353)
T ss_dssp S--SSSEEEEEETTTCCEEEEEECSS-CCCEEEETTTTEEEEEETTT---TEEEEEETTT
T ss_pred C--CCCEEEEEECCCCcEEEEEEcCC-CceEEECCCCCEEEEEECCC---CeEEEEECCC
Confidence 3 34568888998888665443322 23478999999887765432 4677777543
No 230
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.54 E-value=1.6e-13 Score=149.68 Aligned_cols=290 Identities=9% Similarity=-0.019 Sum_probs=175.0
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
...++||| ++++++....+ ..+..++ ..++..+.+.... ... +....+.|+|||+.++....+....
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKL------GFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTC------CEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred ceEEEEeC-CCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccC------CceeEEEEcCCCEEEEEECCCCEEE
Confidence 45789999 55666665432 2354444 4444444332211 111 1225789999998766655443221
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCc-cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
.|+............+........|+++....++.. ....|++||+.+++.... ......+..++|+|||+.
T Consensus 195 --~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~--- 267 (433)
T 3bws_A 195 --VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKE--- 267 (433)
T ss_dssp --EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSE---
T ss_pred --EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCE---
Confidence 232211111111112223334566788755554333 467999999998887666 455556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|++.+...+.. ...+..|+++|+ .+++.............+.|+|||+.|++...
T Consensus 268 -l~~~~~~~~~~-------~~~dg~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 268 -LYIAQFSASNQ-------ESGGGRLGIYSM-----------------DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp -EEEEEEESCTT-------CSCCEEEEEEET-----------------TTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred -EEEEECCCCcc-------ccCCCeEEEEEC-----------------CCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 77776432210 012447999998 66655544444446778999999998877764
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCe----
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS---- 412 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~---- 412 (771)
.+ ..|++||+.+++.... +.. ...+..++|+|||+.|++.....+.
T Consensus 323 ~~----------~~v~v~d~~~~~~~~~----------~~~----------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 323 CC----------SKIEVYDLKEKKVQKS----------IPV----------FDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp TT----------TEEEEEETTTTEEEEE----------EEC----------SSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred CC----------CEEEEEECCCCcEEEE----------ecC----------CCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 43 4689999886543211 100 0123467899999988777654332
Q ss_pred --------eEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004141 413 --------QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 413 --------~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 465 (771)
..|+.+|+.+++...............|+++|+.|++..... ..+++.++
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred cccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 379999999998776655444456678999999887665322 34555554
No 231
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.53 E-value=1.2e-12 Score=136.40 Aligned_cols=224 Identities=15% Similarity=0.133 Sum_probs=148.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+....|+|++..++..+... .+.+|+ .++..+.+.. ...+ ..++|||||+.|+..+.
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~g~~--- 142 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQIKSIDAGPVDA----------WTLAFSPDSQYLATGTH--- 142 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCTTCC----------CCEEECTTSSEEEEECT---
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCEEEEEeCCCccE----------EEEEECCCCCEEEEEcC---
Confidence 5578899999999888765543 566673 3333333322 1122 58999999999988532
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
...+.+||+.+++..... ......+..++|+|||+.
T Consensus 143 -----------------------------------------dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~-- 178 (321)
T 3ow8_A 143 -----------------------------------------VGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKY-- 178 (321)
T ss_dssp -----------------------------------------TSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSE--
T ss_pred -----------------------------------------CCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCE--
Confidence 357889999887654431 233345778999999997
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEE
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+..+ .+..|.++|+ .+++ ...+..+...+.+.+|||||+.|+..
T Consensus 179 --lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~ 224 (321)
T 3ow8_A 179 --LASGA---------------IDGIINIFDI-----------------ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 224 (321)
T ss_dssp --EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCCCEEEECTTSCEEEEE
T ss_pred --EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEcccCCceeEEEEcCCCCEEEEE
Confidence 77765 2347888898 5554 45566667778999999999988877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~ 414 (771)
+.+. .|.+||+.+++......+ +...+..++|+|||+.| ++...++...
T Consensus 225 s~dg-----------~i~iwd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~~~~l-~s~s~D~~v~ 273 (321)
T 3ow8_A 225 SDDG-----------YIKIYDVQHANLAGTLSG-------------------HASWVLNVAFCPDDTHF-VSSSSDKSVK 273 (321)
T ss_dssp CTTS-----------CEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTSCEE
T ss_pred cCCC-----------eEEEEECCCcceeEEEcC-------------------CCCceEEEEECCCCCEE-EEEeCCCcEE
Confidence 6553 488899876543211000 01124567899999865 4555566555
Q ss_pred EEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEE
Q 004141 415 IISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 415 l~~~d~~tg~~~~-l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
|| |+.+++... +......+....|+++++.|+...
T Consensus 274 iw--d~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 274 VW--DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EE--ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EE--eCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 55 777776554 334444556678899998776554
No 232
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=2e-12 Score=135.72 Aligned_cols=257 Identities=9% Similarity=0.007 Sum_probs=147.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|++.... ...+.+++++...+....+...... ......+|||||++|++....+ +.-.+|.
T Consensus 45 ~spdg~~l~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 45 VSPDKRYLYVGVRP--------EFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECTTSSEEEEEETT--------TTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEeecC--------CCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 46789887776432 1356666665333333333221111 2467789999999987765432 3233333
Q ss_pred EecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCc
Q 004141 129 LWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 208 (771)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (771)
+. .+............ . ....+.|||||++|+....
T Consensus 113 ~~-~~~~~~~~~~~~~~-~------~~~~~~~s~dg~~l~~~~~------------------------------------ 148 (343)
T 1ri6_A 113 LE-DGLPVGVVDVVEGL-D------GCHSANISPDNRTLWVPAL------------------------------------ 148 (343)
T ss_dssp EE-TTEEEEEEEEECCC-T------TBCCCEECTTSSEEEEEEG------------------------------------
T ss_pred CC-CCccccccccccCC-C------CceEEEECCCCCEEEEecC------------------------------------
Confidence 32 33222222211110 0 1258899999998876532
Q ss_pred CcccCCccCceEEEEEccC-Cceeecc----CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004141 209 GETYAGKRQPSLFVININS-GEVQAVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 209 g~~~~~~~~~~l~v~d~~~-~~~~~l~----~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
....|++||+.+ ++...+. ..+....+..++|+|||+. |+++.. ....|.
T Consensus 149 -------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~----l~~~~~--------------~~~~i~ 203 (343)
T 1ri6_A 149 -------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY----AYCVNE--------------LNSSVD 203 (343)
T ss_dssp -------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred -------CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE----EEEEeC--------------CCCEEE
Confidence 225789999987 6654220 0223335667899999997 766642 223677
Q ss_pred EEecccccchhhhhhhhcCCCCCCccee------cCCC---CccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004141 284 AVRVSLYKSEASELELKESSSEDLPVVN------LTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~------lt~~---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
+++++. .+++.+. +... ......++|||||++|++....+ ..|.++
T Consensus 204 ~~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----------~~i~v~ 258 (343)
T 1ri6_A 204 VWELKD---------------PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA----------SLITVF 258 (343)
T ss_dssp EEESSC---------------TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT----------TEEEEE
T ss_pred EEEecC---------------CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC----------CEEEEE
Confidence 777621 2232211 1111 12344689999999886655332 458888
Q ss_pred ecCC--CCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004141 355 DWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 355 d~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
|+.. +..+.+ ..+.. . ..+..++|+|||+.|++....++...+|.+|.++|+++.+.
T Consensus 259 d~~~~~~~~~~~--------~~~~~--~--------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 259 SVSEDGSVLSKE--------GFQPT--E--------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EECTTSCCEEEE--------EEEEC--S--------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEcCCCCceEEe--------eeecC--C--------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 8763 222111 11100 0 12457889999998887766678888999999998877654
No 233
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.53 E-value=1.3e-13 Score=156.54 Aligned_cols=263 Identities=17% Similarity=0.149 Sum_probs=167.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||+.|+.....+ .+.+| ..+...+.... ... ..+++|||||+.|+....+...
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~~~~~----------v~~~~~s~~g~~l~~~~~dg~v 368 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQHLQTLTGHSSS----------VWGVAFSPDGQTIASASDDKTV 368 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECCCSSC----------EEEEEECTTSSEEEEEETTSEE
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEeCCCCC----------EEEEEECCCCCEEEEEeCCCEE
Confidence 4577889999999998876543 45566 33332222221 112 2588999999999987765432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+. ..........+........|++|....+++.....|.+||..+.....+ ......+..++||||++.
T Consensus 369 ~--~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~--- 440 (577)
T 2ymu_A 369 K--LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDDQT--- 440 (577)
T ss_dssp E--EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE--ECCSSCEEEEEECTTSSE---
T ss_pred E--EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe--cCCCCCeEEEEECCCCCE---
Confidence 2 2221 1111111122233334566888865556666678999999876666666 344556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ .+..|.++|+ .+.....+..+...+...+|||||+.|+..+.
T Consensus 441 -l~~~~---------------~d~~v~~w~~-----------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 441 -IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp -EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred -EEEEc---------------CCCEEEEEEC-----------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 77665 2336778887 55666777777778899999999999987765
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+. .|.+||..+ +..+ .+.. +...+..++|||||+.| ++...++...||
T Consensus 488 d~-----------~i~iw~~~~-~~~~----------~~~~---------h~~~v~~l~~s~dg~~l-~s~~~dg~v~lw 535 (577)
T 2ymu_A 488 DK-----------TVKLWNRNG-QLLQ----------TLTG---------HSSSVRGVAFSPDGQTI-ASASDDKTVKLW 535 (577)
T ss_dssp TS-----------EEEEEETTS-CEEE----------EEEC---------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred CC-----------EEEEEcCCC-CEEE----------EEeC---------CCCCEEEEEEcCCCCEE-EEEECcCEEEEE
Confidence 42 478888543 2111 0000 11234567899999966 455555555555
Q ss_pred EEECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004141 417 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
|..+..+..+......+....|++||+.|+...
T Consensus 536 --d~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 536 --NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp --CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred --eCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 665444555655555566678999999877544
No 234
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.53 E-value=5.5e-14 Score=144.35 Aligned_cols=120 Identities=14% Similarity=0.208 Sum_probs=80.2
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+.+|.+++.... + ..|.||++||.+.+ ...|...+..| ..+|.|+++|+|| +|.+...........
T Consensus 11 ~~~~~~~~~~~~------g--~g~~~vllHG~~~~--~~~w~~~~~~l-~~~~~vi~~Dl~G---~G~s~~~~~~~~~~~ 76 (291)
T 3qyj_A 11 DTTEARINLVKA------G--HGAPLLLLHGYPQT--HVMWHKIAPLL-ANNFTVVATDLRG---YGDSSRPASVPHHIN 76 (291)
T ss_dssp ECSSCEEEEEEE------C--CSSEEEEECCTTCC--GGGGTTTHHHH-TTTSEEEEECCTT---STTSCCCCCCGGGGG
T ss_pred ecCCeEEEEEEc------C--CCCeEEEECCCCCC--HHHHHHHHHHH-hCCCEEEEEcCCC---CCCCCCCCCCccccc
Confidence 345677765432 1 24679999998765 34676667777 4689999999999 554432111101111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc
Q 004141 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~ 650 (771)
...+++.+.+..+++. ...+++.|+||||||.+++.++.++|++++++|+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (291)
T 3qyj_A 77 YSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIA 130 (291)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCC
Confidence 2344444444444443 23468999999999999999999999999999988753
No 235
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=2.1e-12 Score=136.23 Aligned_cols=275 Identities=12% Similarity=0.064 Sum_probs=147.0
Q ss_pred EEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec---CCccccc
Q 004141 73 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV---PQTVHGS 148 (771)
Q Consensus 73 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~g~ 148 (771)
.++++.++...+...+++... .......++|||||+ |+++.... +...++.+. .++..+.+... ....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~---~~~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p--- 88 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLA---ATQNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPP--- 88 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEE---ECSCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCC---
T ss_pred CEEEEEEcCCCCeEEEeeeee---ccCCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCC---
Confidence 455555544444433322111 113456789999999 76655432 233455444 45554444432 2222
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-C
Q 004141 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-S 227 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~ 227 (771)
..++|||||++|++.... ...+.+|++. +
T Consensus 89 -------~~~a~spdg~~l~~~~~~-------------------------------------------~~~v~v~~~~~~ 118 (347)
T 3hfq_A 89 -------AYVAVDEARQLVYSANYH-------------------------------------------KGTAEVMKIAAD 118 (347)
T ss_dssp -------SEEEEETTTTEEEEEETT-------------------------------------------TTEEEEEEECTT
T ss_pred -------EEEEECCCCCEEEEEeCC-------------------------------------------CCEEEEEEeCCC
Confidence 588999999988876432 2467777774 4
Q ss_pred CceeeccC--CC--------CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 228 GEVQAVKG--IP--------KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 228 ~~~~~l~~--~~--------~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
+..+.+.. .. ....+..++|+|||+ +++... ....|+++++.
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-----l~v~~~--------------~~~~v~~~~~~--------- 170 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-----LAVIDL--------------GSDKVYVYNVS--------- 170 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-----EEEEET--------------TTTEEEEEEEC---------
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCc-----EEEEeC--------------CCCEEEEEEEC---------
Confidence 44433310 11 111345689999998 444431 22368888872
Q ss_pred hhhcCCCCCCcceecC---C-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC--CCCCCCccceeeE
Q 004141 298 ELKESSSEDLPVVNLT---E-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDV 371 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt---~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~~~ 371 (771)
.+++...+. . .......++|||||++|++..... ..+.++++.. +....+
T Consensus 171 -------~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~~------- 226 (347)
T 3hfq_A 171 -------DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS----------SQIASLKYDTQTGAFTQL------- 226 (347)
T ss_dssp -------TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEEEETTTTEEEEE-------
T ss_pred -------CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCceEEe-------
Confidence 244433221 1 122355689999999887766442 3456666553 332111
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe---cCCCCCceeeEEeecCCEEE
Q 004141 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNII 448 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~dg~~l~ 448 (771)
..+... ...+.+. .....++|+|||++|+++....+...+|.++. +|+.+.+ ...........|++||++|+
T Consensus 227 -~~~~~~-~~~~~~~--~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 227 -GIVKTI-PADYTAH--NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp -EEEESS-CTTCCSC--CEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred -eeeeec-CCCCCCC--CcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 000000 0011100 01345789999998887766566666666553 3444443 22222345678999999888
Q ss_pred EEEeCCCCCCeEEEEEe
Q 004141 449 AVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 449 ~~~~~~~~p~~l~~~~~ 465 (771)
+...... .+.++++
T Consensus 302 v~~~~~~---~v~v~~~ 315 (347)
T 3hfq_A 302 VVNQNTD---NATLYAR 315 (347)
T ss_dssp EEETTTT---EEEEEEE
T ss_pred EEEcCCC---cEEEEEE
Confidence 7665332 3555443
No 236
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.53 E-value=1.6e-12 Score=136.68 Aligned_cols=230 Identities=11% Similarity=0.048 Sum_probs=145.7
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
.+...+||||++ |+..+.. + .+.+| ..++....... ..+..+. +.+++|||||++|+..+.+
T Consensus 84 ~v~~~~~s~d~~-l~~~s~d--g---~v~lWd~~~~~~~~~~~~~~~~H~~~------V~~v~~spdg~~l~sgs~d--- 148 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVASDS--G---AVELWELDENETLIVSKFCKYEHDDI------VSTVSVLSSGTQAVSGSKD--- 148 (344)
T ss_dssp CEEEEEEETTTE-EEEEETT--S---EEEEEEECTTSSCEEEEEEEECCSSC------EEEEEECTTSSEEEEEETT---
T ss_pred CEEEEEEeCCCe-EEEEECC--C---EEEEEeccCCCceeEeeccccCCCCC------EEEEEECCCCCEEEEEeCC---
Confidence 478899999964 5554443 2 34455 23333222221 1111122 2689999999999886433
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
..|.+||+.+++..... ......+..+.|+||++.
T Consensus 149 -----------------------------------------~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~--- 183 (344)
T 4gqb_B 149 -----------------------------------------ICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDS--- 183 (344)
T ss_dssp -----------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTT---
T ss_pred -----------------------------------------CeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCC---
Confidence 57899999998865541 334557888999999988
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC--CCccccceeecCCCCEEEE
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~~~p~~SpDG~~l~f 333 (771)
++.++. .+..|.++|+ .+++. ..+.. ....+.+..|+|++..++.
T Consensus 184 -~l~s~s--------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 184 -VFLSCS--------------EDNRILLWDT-----------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp -EEEEEE--------------TTSCEEEEET-----------------TSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred -ceeeec--------------cccccccccc-----------------cccceeeeeecceeeccceeeeecCCCCcceE
Confidence 766552 2336888888 55543 33432 2334678999997655443
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
....+ ..|.+||+.+++....... +...+..++|+|||..++++.+.++..
T Consensus 232 sg~~d----------g~v~~wd~~~~~~~~~~~~-------------------h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 232 FGDEN----------GTVSLVDTKSTSCVLSSAV-------------------HSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp EEETT----------SEEEEEESCC--CCEEEEC-------------------CSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred EeccC----------CcEEEEECCCCcEEEEEcC-------------------CCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 33322 3588999887664321111 111345678999998777777777766
Q ss_pred EEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEe
Q 004141 414 VIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~ 452 (771)
.|| |+.++++.++......+....|+|+++.++++.+
T Consensus 283 ~vw--d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 283 AVL--DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEE--CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEE--ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 665 8889988877665556667789999988877665
No 237
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.53 E-value=8.8e-15 Score=149.48 Aligned_cols=199 Identities=11% Similarity=0.032 Sum_probs=112.3
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|.||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+... .....++++.+.+..+++.. ...
T Consensus 50 ~~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~ 117 (280)
T 3qmv_A 50 APLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPG---RGLRLRE-----RPYDTMEPLAEAVADALEEH-RLT 117 (280)
T ss_dssp CSEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTT---SGGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCS
T ss_pred CCceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCC
Confidence 34889999997765 4467778888866 99999999999 6655321 11223455554444444431 135
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCcee----EEEecCCccchhhhh-cCCCCCcchh---hhhccCCCCc-----cCCCC
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDKFV----AAAARNPLCNLALMV-GTTDIPDWCY---VESYGSKGKD-----SFTES 682 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~----~~v~~~p~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~-----~~~~~ 682 (771)
+++.|+||||||.+++.++.++|+++. .+++.+......... .........+ ...++..... .+...
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCT
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHH
Confidence 789999999999999999998887665 555544322111000 0000000000 0000000000 00000
Q ss_pred CC---hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004141 683 PS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 683 ~~---~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
.. ...........+ ..+..+++|+|+++|++|..++++....+.+.+. ..++++++++ ||....
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~ 264 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT---GSFLRRHLPG-NHFFLN 264 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS---SCEEEEEEEE-ETTGGG
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcC---CceEEEEecC-CCeEEc
Confidence 00 000111111111 1246788999999999999999887776655442 2467777875 897654
No 238
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.53 E-value=5.3e-13 Score=152.43 Aligned_cols=184 Identities=9% Similarity=0.009 Sum_probs=108.9
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
||||++|+-. ...+.+.+|++...... ...+... ..+.+...+|||||++||...... +......+
T Consensus 68 spdg~~lasg---------~~d~~v~lWd~~~~~~~-~~~~~~~---~~~~v~~v~fs~dg~~l~~~~~~~-~~~~~v~~ 133 (611)
T 1nr0_A 68 SPSGYYCASG---------DVHGNVRIWDTTQTTHI-LKTTIPV---FSGPVKDISWDSESKRIAAVGEGR-ERFGHVFL 133 (611)
T ss_dssp CTTSSEEEEE---------ETTSEEEEEESSSTTCC-EEEEEEC---SSSCEEEEEECTTSCEEEEEECCS-SCSEEEEE
T ss_pred CCCCcEEEEE---------eCCCCEEEeECCCCcce-eeEeecc---cCCceEEEEECCCCCEEEEEECCC-CceeEEEE
Confidence 5566665543 34467777777432211 1111111 125688999999999999876543 22234455
Q ss_pred ecCCcceEEEecCCcccccccCCCcccceeecCCCCe-EEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCc
Q 004141 130 WSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 208 (771)
Q Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (771)
|+.+.....+. +..+ ....++|+||++. |+..+.+...+ .|+............+..+...+.|++|.
T Consensus 134 wd~~~~~~~l~---gh~~------~v~~v~f~p~~~~~l~s~s~D~~v~--lwd~~~~~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 134 FDTGTSNGNLT---GQAR------AMNSVDFKPSRPFRIISGSDDNTVA--IFEGPPFKFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp TTTCCBCBCCC---CCSS------CEEEEEECSSSSCEEEEEETTSCEE--EEETTTBEEEEEECCCSSCEEEEEECTTS
T ss_pred eeCCCCcceec---CCCC------CceEEEECCCCCeEEEEEeCCCeEE--EEECCCCeEeeeeccccCceEEEEECCCC
Confidence 65443322111 1111 2368999999985 77766665433 33321111112233455566677899996
Q ss_pred CcccCCccCceEEEEEccCCceeeccCC------CCCCccceEEEecCCCCCccEEEEEe
Q 004141 209 GETYAGKRQPSLFVININSGEVQAVKGI------PKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 209 g~~~~~~~~~~l~v~d~~~~~~~~l~~~------~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
...+++..+..|.+||+.+++....... .....+..++|||||+. |+..+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~----l~s~s 258 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK----IASAS 258 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE----EEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE----EEEEe
Confidence 6666677789999999988876544100 23446788999999997 77665
No 239
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.52 E-value=8e-14 Score=148.64 Aligned_cols=122 Identities=16% Similarity=0.203 Sum_probs=92.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC---------CcEEEEECCCCCCCCChhhh
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---------GYSLLIVNYRGSLGFGEEAL 585 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~---------G~~Vv~~d~rG~~~~g~~~~ 585 (771)
.-+|..++...+.+. .+..|.||++||.+++ ...|...+..|++. ||.|+++|+|| +|.+..
T Consensus 74 ~i~g~~i~~~~~~~~----~~~~~plll~HG~~~s--~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~~ 144 (388)
T 4i19_A 74 EIDGATIHFLHVRSP----EPDATPMVITHGWPGT--PVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSGP 144 (388)
T ss_dssp EETTEEEEEEEECCS----STTCEEEEEECCTTCC--GGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGCC
T ss_pred EECCeEEEEEEccCC----CCCCCeEEEECCCCCC--HHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCCC
Confidence 346888987777654 2345789999998776 44677888888775 99999999999 665532
Q ss_pred hcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 586 QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 586 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
... .....+++.+.+..+++. ++.++++++||||||.+++.++.++|++++++++.+|..
T Consensus 145 ~~~----~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 145 LKS----AGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp CSS----CCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred CCC----CCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 111 123467777777766665 345689999999999999999999999999999998643
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.52 E-value=9.4e-13 Score=153.32 Aligned_cols=263 Identities=10% Similarity=0.032 Sum_probs=161.0
Q ss_pred EEecCC-CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCC
Q 004141 45 TFNSGN-GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 123 (771)
Q Consensus 45 ~~~~~s-~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 123 (771)
..+.+| |||++|+|+.+.. +.....||++++.++. +. ++ ..++ .....++|||||+.|+|++......
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~----G~~~~~l~v~dl~~g~-~~--l~-~~~~---~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMS----GNEVYTIEFKRISDPS-QT--IA-DKVS---GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEECTTTTCEEEEEEESS----SSSCEEEEEEETTCTT-CC--CC-CCEE---EECSCCEECSSTTEEEEEEECTTCC
T ss_pred eeeEecCCCCCEEEEEEeCC----CCceEEEEEEECCCCC-Ee--CC-cccc---CceeeEEEecCCCEEEEEEECCCCC
Confidence 356678 9999999998753 2334679998874430 21 11 1111 1245689999999999998754333
Q ss_pred -CeEEEEec-CCcc--eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004141 124 -PIQFELWS-QSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 124 -~~~~~~~~-~~~~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
.++|.... ++.. +.+...... ..+..+.|||||++|+|.+...
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~--------~~~~~~~~SpDg~~l~~~~~~~------------------------- 292 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNP--------LFSAFMYKAADTNTLCIGSQSP------------------------- 292 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCT--------TCEEEEEECTTSSEEEEEEECS-------------------------
T ss_pred CCEEEEEECCCCchhcEEEEecCCC--------ceEEEEEECCCCCEEEEEecCC-------------------------
Confidence 36777773 3332 223222111 1124789999999999986432
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCC--ce--eeccCCCCCCccceEEEecC---CCCCccEEEEEeecCcceeeee
Q 004141 200 GQGDWEEDWGETYAGKRQPSLFVININSG--EV--QAVKGIPKSLSVGQVVWAPL---NEGLHQYLVFVGWSSETRKLGI 272 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--~~--~~l~~~~~~~~~~~~~wspD---g~~~~~~l~~~~~~~~~~~~g~ 272 (771)
....||++|++++ +. +.+ ++.. ..+.|+|| |+. |+|.++..+
T Consensus 293 ----------------~~~~l~~~d~~~~~~~~~~~~l--~~~~---~~~~~s~~~~~g~~----l~~~t~~~~------ 341 (751)
T 2xe4_A 293 ----------------ETAEVHLLDLRKGNAHNTLEIV--RPRE---KGVRYDVQMHGTSH----LVILTNEGG------ 341 (751)
T ss_dssp ----------------SCEEEEEEESSSCTTCCCEEES--SCCC---TTCCEEEEEETTTE----EEEEECTTT------
T ss_pred ----------------CCceEEEEECCCCCCCceeEEe--ecCC---CCceEEEeeeeCCE----EEEEeCCCC------
Confidence 2378999999886 45 666 4432 23456666 888 999986541
Q ss_pred eeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cccee-cCCCCccccceeecCCCCEEEEEecCCCCCCCCcccccc
Q 004141 273 KYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDS 350 (771)
Q Consensus 273 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~ 350 (771)
....+||.+++ ++ +..+. |........-..|+++++.|+|....+ +..+
T Consensus 342 ----a~~~~L~~~d~-----------------~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~--------g~~~ 392 (751)
T 2xe4_A 342 ----AVNHKLLIAPR-----------------GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA--------GLTR 392 (751)
T ss_dssp ----CTTCEEEEEET-----------------TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET--------TEEE
T ss_pred ----CCCcEEEEEcC-----------------CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC--------CEEE
Confidence 12348999998 43 34344 433333223345677789999988775 2578
Q ss_pred ceeeec-------CCCC-CCCCccceeeEEecccccCCCCCcccccCCCCCCcc----ccCCCEEEEEeeeCC-eeEEEE
Q 004141 351 LHRIDW-------PTNG-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW----LSDGCTMLLSSIWGS-SQVIIS 417 (771)
Q Consensus 351 l~~~d~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~----s~Dg~~l~~~~~~~~-~~~l~~ 417 (771)
|+++++ .+++ .+.++.... . ....+.+ ++|++.|+|..+... ...+|.
T Consensus 393 l~~~dl~~~~~~~~~g~~~~~l~l~~~-----------~--------~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~ 453 (751)
T 2xe4_A 393 IWTMMADSQDGVFKAGTGLREVVMEEP-----------I--------FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFD 453 (751)
T ss_dssp EEEEECCTTTSCCCTTTCCEECCCCCS-----------S--------CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEE
T ss_pred EEEEecccccccccCCccceEECCCCc-----------e--------eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEE
Confidence 999996 4443 333211100 0 0011222 557777777765443 457999
Q ss_pred EECCCCcEEEecC
Q 004141 418 VNVSSGELLRITP 430 (771)
Q Consensus 418 ~d~~tg~~~~l~~ 430 (771)
+|+.+++.+.|+.
T Consensus 454 ~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 454 VSPQDHSRTAVKV 466 (751)
T ss_dssp ECTTTCCEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 9999999888764
No 241
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.52 E-value=3.2e-13 Score=137.84 Aligned_cols=235 Identities=13% Similarity=0.166 Sum_probs=164.7
Q ss_pred eCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004141 106 PSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 106 ~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
++++|++|+|.... +...+|.+. ++...+++++.. .--+++||++|+|+.....+...
T Consensus 21 ~~~~g~~iy~~n~~--d~~~ly~~~~dg~~~~~l~~~~--------------~~~i~~~g~~Iyy~~~~~~~~~~----- 79 (302)
T 3s25_A 21 FCESDGEVFFSNTN--DNGRLYAMNIDGSNIHKLSNDT--------------AMYINADKNYVYYVRNNNQKITS----- 79 (302)
T ss_dssp EEEETTEEEEEEGG--GTTEEEEEETTSCSCEEEEEEE--------------EEEEEECSSEEEEEEECC----------
T ss_pred EEEeCCEEEEEeCC--CCceEEEEcCCCCCCEEccCCc--------------eeeEEEcCCEEEEEECCCCcccc-----
Confidence 46799999887653 346799999 666777777632 33478999999999865421100
Q ss_pred CCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeec
Q 004141 185 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
..+....+..||++++++++.++| .... ...|+|+|++ |+|+...
T Consensus 80 -------------------------~~~~~~n~~~Iy~i~~dg~~~~~l--~~~~----~~~~s~~g~~----Iy~~~~~ 124 (302)
T 3s25_A 80 -------------------------QTFFSYDRNSLCRIKRNGHGSTVL--DPDP----CIYASLIGNY----IYYLHYD 124 (302)
T ss_dssp --------------------------CCSSCCSEEEEEEETTSCCCEEE--ECSC----EEEEEEETTE----EEEEEES
T ss_pred -------------------------cceeccCCCeEEEEeCCCCcceEe--ecCC----ccEEEEeCCE----EEEEeec
Confidence 000011357899999999998888 3322 2379999999 9998621
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004141 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
. .....||++++ ++...++|+.+.. +.|+|+|++|+|.+..
T Consensus 125 ~-----------~~~~~Iy~~~~-----------------dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g------- 165 (302)
T 3s25_A 125 T-----------QTATSLYRIRI-----------------DGEEKKKIKNHYL----FTCNTSDRYFYYNNPK------- 165 (302)
T ss_dssp S-----------SSCEEEEEEET-----------------TSCCCEEEESSCC----CCSEEETTEEEEECTT-------
T ss_pred C-----------CCCceEEEEEC-----------------CCCCeEEEeCCCc----eEeeEECCEEEEEeCC-------
Confidence 1 12348999999 7777888887643 5679999999999862
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004141 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+|+++++.++..+.+..+. ... +++|+++.|+++....+ .+|++++++++.
T Consensus 166 ---~~~Iy~~~l~g~~~~~l~~~~----------------------~~~-~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~ 218 (302)
T 3s25_A 166 ---NGQLYRYDTASQSEALFYDCN----------------------CYK-PVVLDDTNVYYMDVNRD-NAIVHVNINNPN 218 (302)
T ss_dssp ---TCCEEEEETTTTEEEEEECSC----------------------EEE-EEEEETTEEEEEEGGGT-TEEEEECSSSCC
T ss_pred ---CceEEEEECCCCCEEEEeCCC----------------------ccc-eeeecCCEEEEEEcCCC-cEEEEEECCCCC
Confidence 357999999876654432211 011 25699999998765433 789999999999
Q ss_pred EEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 425 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 425 ~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.+.|+... .+.+++++++|+++..... ..|+++++...
T Consensus 219 ~~~Lt~~~----~~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~ 256 (302)
T 3s25_A 219 PVVLTEAN----IEHYNVYGSLIFYQRGGDN--PALCVVKNDGT 256 (302)
T ss_dssp CEECSCSC----EEEEEEETTEEEEEECSSS--CEEEEEETTSC
T ss_pred eEEEeCCC----cceEEECCCEEEEEECCCC--cEEEEEECCCC
Confidence 88887543 2569999999988754433 78999887643
No 242
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.52 E-value=3.6e-15 Score=163.36 Aligned_cols=228 Identities=15% Similarity=0.146 Sum_probs=140.6
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHHHHCC-cEEEEECCC-CCCCCChhhhhcCCCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~la~~G-~~Vv~~d~r-G~~~~g~~~~~~~~~~ 591 (771)
+.|+ +...+|.|.. ..++.|+||++|||++..... ........|+++| ++|+.+||| |..+++...... ...
T Consensus 79 ~edc--L~l~v~~P~~--~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 79 SEDC--LYVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CSCC--CEEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCC--CEEEEEeCCC--CCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 3445 4456778874 234589999999988654332 2222355666665 999999999 333343221100 112
Q ss_pred ccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCccchhhhhcCCCCCcch
Q 004141 592 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWC 666 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~~~~~~~~~~~~~~~~ 666 (771)
.+...+.|+.++++|+.++ ...|++||+|+|+|+||++++.++... +++|+++|+.+|...+......... ...
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~-~~~ 232 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAAST-AAA 232 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHH-HHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHH-HHH
Confidence 2334478999999999875 236899999999999999998887653 5789999999997632211000000 001
Q ss_pred hhhhccCC--CCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004141 667 YVESYGSK--GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 667 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
+...++.. ....+...+. + +.+...+++........|.+++++..|..+.+++..++++..+..++++.+-..++
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~-~--~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~ 309 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAA-E--DLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRD 309 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCH-H--HHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETT
T ss_pred HHHHcCCCHHHHHHHHcCCH-H--HHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecc
Confidence 11222221 1111111111 1 11111122211112345677889999999999999999888888899999999999
Q ss_pred CCccCCC
Q 004141 745 DVHGIER 751 (771)
Q Consensus 745 ~~H~~~~ 751 (771)
++|.+..
T Consensus 310 Eg~~~~~ 316 (489)
T 1qe3_A 310 EGYLFFT 316 (489)
T ss_dssp GGGGTCC
T ss_pred hhHhhcc
Confidence 9998764
No 243
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.51 E-value=1.5e-13 Score=143.04 Aligned_cols=104 Identities=23% Similarity=0.450 Sum_probs=72.2
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCcc-ccchhhHHHHHHHHHHcCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+||++||++.+ ...|...+..|++ .+|.|+++|+|| +|.+.... ...+. ...++|+.+.++.+... +
T Consensus 38 ~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~G---hG~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~--~- 108 (316)
T 3c5v_A 38 GPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRS---HGETKVKN-PEDLSAETMAKDVGNVVEAMYGD--L- 108 (316)
T ss_dssp SCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTT---STTCBCSC-TTCCCHHHHHHHHHHHHHHHHTT--C-
T ss_pred CcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCC---CCCCCCCC-ccccCHHHHHHHHHHHHHHHhcc--C-
Confidence 4789999997654 4467788888876 389999999999 55543211 01111 11245565666655321 1
Q ss_pred CCeEEEEEcChhHHHHHHHHhh--CCCceeEEEecCCc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~p~ 650 (771)
.+++.|+||||||.+++.+|.+ +|+ ++++|+.++.
T Consensus 109 ~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 576 8999988764
No 244
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.50 E-value=1.7e-12 Score=137.82 Aligned_cols=236 Identities=15% Similarity=0.131 Sum_probs=141.7
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCC---ccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEE
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPF---PVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEF 139 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~---~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~ 139 (771)
+..+.....++++++.........+....+ ..........+|||||+++|+.+... ...+.+|+ .++.....
T Consensus 97 l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~---d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 97 ITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKV---PAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCS---SCEEEEEETTTTEEEEEE
T ss_pred EEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCC---CCEEEEeECCCCcEEEEe
Confidence 334444556666666544432222211111 11112356789999999998876432 23566773 33333333
Q ss_pred ecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCce
Q 004141 140 HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 219 (771)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 219 (771)
.....+ ..++|||||+.|+..+. ..
T Consensus 174 ~~~~~V----------~~v~fspdg~~l~s~s~---------------------------------------------~~ 198 (365)
T 4h5i_A 174 ETRGEV----------KDLHFSTDGKVVAYITG---------------------------------------------SS 198 (365)
T ss_dssp ECSSCC----------CEEEECTTSSEEEEECS---------------------------------------------SC
T ss_pred CCCCce----------EEEEEccCCceEEeccc---------------------------------------------ee
Confidence 322222 68999999999988632 34
Q ss_pred EEEEEccCCceee-ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhh
Q 004141 220 LFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 298 (771)
Q Consensus 220 l~v~d~~~~~~~~-l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~ 298 (771)
+.+|+..+++... .........+..++|+|||+. ++..+.... ....|+.+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~----l~~~s~d~~-----------~~~~i~~~~~----------- 252 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV----LIAASLKKG-----------KGIVLTKISI----------- 252 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE----EEEEEESSS-----------CCEEEEEEEE-----------
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE----EEEEecCCc-----------ceeEEeeccc-----------
Confidence 5667766665432 211233446788999999998 877763322 1124666665
Q ss_pred hhcCCCCCCc-----ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEe
Q 004141 299 LKESSSEDLP-----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 373 (771)
Q Consensus 299 ~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 373 (771)
.... ...+..+...+.+.+|||||+.||..+.+. .|.+||+.+++....
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----------~V~iwd~~~~~~~~~--------- 306 (365)
T 4h5i_A 253 ------KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----------SIALVKLKDLSMSKI--------- 306 (365)
T ss_dssp ------ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEE---------
T ss_pred ------ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----------EEEEEECCCCcEEEE---------
Confidence 2222 234555666788999999999999887663 488999887654211
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004141 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
+.. .+...+..++|||||++| ++.+.++..+||.+..
T Consensus 307 ~~~---------gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 307 FKQ---------AHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPL 343 (365)
T ss_dssp ETT---------SSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCT
T ss_pred ecC---------cccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCC
Confidence 000 011235678999999855 6777788888887643
No 245
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.49 E-value=2e-13 Score=144.67 Aligned_cols=284 Identities=10% Similarity=0.039 Sum_probs=165.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCC-CeEEEEec--CCcc-----eEEEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENES-PIQFELWS--QSQL-----EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~-~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
..+..++|||||++||-.+.....- .....+|. .+.. ........ .+.+++|+||++.|+ .
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~----------~V~~~~~s~d~~~l~-~ 111 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA----------GVTDVAWVSEKGILV-A 111 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS----------CEEEEEEETTTEEEE-E
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC----------CEEEEEEcCCCCEEE-E
Confidence 4588999999999999876532100 11223342 1111 01111111 226899999997554 4
Q ss_pred ecCCCCCCCCccCCCCCCCCC----CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEE
Q 004141 171 AEEPSPSKPTFSLGSTKGGSS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVV 246 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ 246 (771)
+.++..+ .|+......... ...+......+.|++|....+++.....|.+||+.+++..... ......+..++
T Consensus 112 s~dg~v~--lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~ 188 (357)
T 4g56_B 112 SDSGAVE--LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-NAHSSEVNCVA 188 (357)
T ss_dssp ETTSCEE--EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEE
T ss_pred ECCCEEE--EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEE
Confidence 5444322 344322221111 1123344456678888666677777889999999998765541 23345678899
Q ss_pred EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcce-ec--CCCCcccccee
Q 004141 247 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NL--TESISSAFFPR 323 (771)
Q Consensus 247 wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~l--t~~~~~~~~p~ 323 (771)
|+|+++. ++.++. .+..|.++|+ .+++.. .+ ......+.+.+
T Consensus 189 ~s~~~~~----~~~s~~--------------~dg~v~~wd~-----------------~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 189 ACPGKDT----IFLSCG--------------EDGRILLWDT-----------------RKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp ECTTCSS----CEEEEE--------------TTSCEEECCT-----------------TSSSCBCBCCCTTCCSCEEEEE
T ss_pred EccCCCc----eeeeec--------------cCCceEEEEC-----------------CCCceeeeeeeccccccccchh
Confidence 9999986 555442 2336888887 444432 22 23344578899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l 403 (771)
|+|++..++.....+ ..|.+||+.+++..+.... ....+..++|+||++.+
T Consensus 234 ~sp~~~~~la~g~~d----------~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 234 WHPEKDDTFACGDET----------GNVSLVNIKNPDSAQTSAV-------------------HSQNITGLAYSYHSSPF 284 (357)
T ss_dssp ECTTSTTEEEEEESS----------SCEEEEESSCGGGCEEECC-------------------CSSCEEEEEECSSSSCC
T ss_pred hhhcccceEEEeecc----------cceeEEECCCCcEeEEEec-------------------cceeEEEEEEcCCCCCE
Confidence 999976554443332 3588999877654221111 01124567899999877
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEee-cCCEEEEEEeCCCCCCeEEEEEec
Q 004141 404 LLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~-dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
+++...++...|| |+.++++.+.......+....|+| |++.|+.... + ..|.+-++.
T Consensus 285 lasgs~D~~i~iw--d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~--D--g~v~iW~~~ 342 (357)
T 4g56_B 285 LASISEDCTVAVL--DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGW--D--HKVLHHHLP 342 (357)
T ss_dssp EEEEETTSCEEEE--CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEET--T--SCEEEEECC
T ss_pred EEEEeCCCEEEEE--ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcC--C--CeEEEEECC
Confidence 7777766665555 888898877765555566678898 6665543332 2 235555554
No 246
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.6e-12 Score=140.75 Aligned_cols=266 Identities=12% Similarity=0.081 Sum_probs=160.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|||||++|+.....+ .+.+| ..+.....+.... + .+..+.|+|||+.|+..+.+....
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~---~------~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENG-----ELRLWNKTGALLNVLNFHR---A------PIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECCCC---S------CEEEEEECTTSSEEEEEETTCCEE
T ss_pred CceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCeeeeccCCC---c------cEEEEEECCCCCEEEEEecCCeEE
Confidence 4688999999999998876543 34455 3343333332211 1 126899999999999887655322
Q ss_pred CCCccCCCCCCCCCCccCC---------------CCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCcc
Q 004141 178 KPTFSLGSTKGGSSDKDCN---------------SWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSV 242 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~ 242 (771)
.|+.............. .......|.++ +..+++.....|++||+.+++..... ......+
T Consensus 175 --iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~-~~~~~~i 250 (425)
T 1r5m_A 175 --LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKL-IGHHGPI 250 (425)
T ss_dssp --EEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEE-CCCSSCE
T ss_pred --EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeee-ccCCCce
Confidence 22221111000000000 11334556665 55666667789999999987654431 3344567
Q ss_pred ceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccc
Q 004141 243 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFF 321 (771)
Q Consensus 243 ~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~ 321 (771)
..+.|+||++. |+..+ .+..|+++|+ ..++ ...+..+...+..
T Consensus 251 ~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 251 SVLEFNDTNKL----LLSAS---------------DDGTLRIWHG-----------------GNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp EEEEEETTTTE----EEEEE---------------TTSCEEEECS-----------------SSBSCSEEECCCSSCEEE
T ss_pred EEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCccceEecCCCccEEE
Confidence 88999999997 77665 2347888887 4443 4555556677899
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~ 401 (771)
..|+||| .|+..+.+ ..|.+||+.+++.... +.. ....+..++|+||++
T Consensus 295 ~~~~~~~-~l~~~~~d-----------~~i~i~d~~~~~~~~~----------~~~---------~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMD-----------GSVRLWSLKQNTLLAL----------SIV---------DGVPIFAGRISQDGQ 343 (425)
T ss_dssp EEEETTT-EEEEEETT-----------SEEEEEETTTTEEEEE----------EEC---------TTCCEEEEEECTTSS
T ss_pred EEECCCC-EEEEEeCC-----------CcEEEEECCCCcEeEe----------ccc---------CCccEEEEEEcCCCC
Confidence 9999999 66655543 3588999876543211 100 011245678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCc---------------------EEEecCCCC--CceeeEEeecCCEEEEEEe
Q 004141 402 TMLLSSIWGSSQVIISVNVSSGE---------------------LLRITPAES--NFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~---------------------~~~l~~~~~--~~~~~~~s~dg~~l~~~~~ 452 (771)
.|+. ...++...+| ++.+++ +..+..... .+....|+++++.|+....
T Consensus 344 ~l~~-~~~dg~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 344 KYAV-AFMDGQVNVY--DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEE-EETTSCEEEE--ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEE-EECCCeEEEE--ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 6654 4445554555 665555 333443322 4566788888887765543
No 247
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.49 E-value=9.9e-13 Score=149.12 Aligned_cols=264 Identities=17% Similarity=0.142 Sum_probs=166.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|+|||+.|+...... .+.+| ..++..+.... ..+ .+..++|+|||+.|+..+.+...+
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~-----~i~~w~~~~~~~~~~~~---h~~------~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDK-----TVKLWNRNGQLLQTLTG---HSS------SVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECC---CSS------CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEec---CCC------CeEEEEECCCCCEEEEEeCCCeEE
Confidence 4577899999999998776543 35566 44443333321 111 125889999999999887665432
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
.|+... ........+........|+++....+.+.....|.+||..+.....+ ......+..++|||||+.
T Consensus 329 --~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~dg~~---- 399 (577)
T 2ymu_A 329 --LWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVRGVAFSPDGQT---- 399 (577)
T ss_dssp --EEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE--ECCSSCEEEEEECTTSSC----
T ss_pred --EEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 232111 00011111222223456788865566666778899999877666666 344556788999999998
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|+..+ .+..|.++|. .+.....+..+...+...+||||++.|+..+.+
T Consensus 400 l~~~~---------------~d~~v~~~~~-----------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 400 IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEEEE---------------TTSEEEEECT-----------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEe---------------CCCEEEEEeC-----------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 88766 2236777886 555566677777778899999999999877755
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004141 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 417 (771)
. .|.+||..+.....+. . +...+..++|+|||+.|+ +...++...||
T Consensus 448 ~-----------~v~~w~~~~~~~~~~~-----------~---------~~~~v~~~~~spd~~~la-s~~~d~~i~iw- 494 (577)
T 2ymu_A 448 K-----------TVKLWNRNGQLLQTLT-----------G---------HSSSVRGVAFSPDGQTIA-SASDDKTVKLW- 494 (577)
T ss_dssp S-----------EEEEEETTSCEEEEEE-----------C---------CSSCEEEEEECTTSCEEE-EEETTSEEEEE-
T ss_pred C-----------EEEEEECCCCEEEEEc-----------C---------CCCCEEEEEEcCCCCEEE-EEeCCCEEEEE-
Confidence 3 4778886432111110 0 011245678999999664 44555555555
Q ss_pred EECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004141 418 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 418 ~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
|..+..++.+......+....|+||++.|+...
T Consensus 495 -~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 495 -NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp -ETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred -cCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 665555556665555566778999999776544
No 248
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.48 E-value=9.2e-13 Score=137.81 Aligned_cols=279 Identities=9% Similarity=-0.007 Sum_probs=171.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
+.+..++|||||+.+++....+ . + ..+ .......+.... ..+ .+..++|+|||+.|+... +...
T Consensus 10 ~~v~~~~~s~dg~~~~~~~~~~-~---~-~~~~~~~~~~~~~~~~--h~~------~v~~~~~~~~~~~l~~~~-dg~i- 74 (337)
T 1gxr_A 10 KPAYSFHVTADGQMQPVPFPPD-A---L-IGPGIPRHARQINTLN--HGE------VVCAVTISNPTRHVYTGG-KGCV- 74 (337)
T ss_dssp EECCEEEECSSSCEEECCCCTT-S---S-SSTTCCSEEEEEEEEC--CSS------CCCEEEECSSSSEEEEEC-BSEE-
T ss_pred CceeEEEECCCCCEEEeecCCC-c---E-eccccCCccccceecc--CCC------ceEEEEEecCCcEEEEcC-CCeE-
Confidence 3477899999999998764332 1 1 222 222212222111 111 126999999999998876 3322
Q ss_pred CCCccCCCCCCCCCCc-----cCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCC
Q 004141 178 KPTFSLGSTKGGSSDK-----DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLN 251 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg 251 (771)
..|+........... .+........|.++....+++.....|.+||+.+++..... -......+..+.|+||+
T Consensus 75 -~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 153 (337)
T 1gxr_A 75 -KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS 153 (337)
T ss_dssp -EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS
T ss_pred -EEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC
Confidence 234332222111111 22333345668888655666667789999999988732221 02334457789999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCE
Q 004141 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF 330 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~ 330 (771)
+. |+..+ .+..|+++|+ .+++ ...+..+...+....|+|||+.
T Consensus 154 ~~----l~~~~---------------~dg~v~~~d~-----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 154 KV----CFSCC---------------SDGNIAVWDL-----------------HNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp SE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CE----EEEEe---------------CCCcEEEEeC-----------------CCCceeeeeecccCceEEEEECCCCCE
Confidence 97 77655 2347888998 4444 4455556677889999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~ 410 (771)
|+..+.+ ..|++||+.+++..... . ....+..++|+||++.|++.. .+
T Consensus 198 l~~~~~d-----------g~i~~~d~~~~~~~~~~----------~----------~~~~v~~~~~s~~~~~l~~~~-~~ 245 (337)
T 1gxr_A 198 LWTGGLD-----------NTVRSWDLREGRQLQQH----------D----------FTSQIFSLGYCPTGEWLAVGM-ES 245 (337)
T ss_dssp EEEEETT-----------SEEEEEETTTTEEEEEE----------E----------CSSCEEEEEECTTSSEEEEEE-TT
T ss_pred EEEEecC-----------CcEEEEECCCCceEeee----------c----------CCCceEEEEECCCCCEEEEEc-CC
Confidence 8877654 35889998775532110 0 001245678999999776554 33
Q ss_pred CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 411 SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 411 ~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+ .++.+++.+++...+......+....|+++++.|+.... -..+.+.++.+
T Consensus 246 ~--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~~~ 296 (337)
T 1gxr_A 246 S--NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK----DNLLNAWRTPY 296 (337)
T ss_dssp S--CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTT
T ss_pred C--cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecC----CCcEEEEECCC
Confidence 3 466668888888877766666677789999997765543 23566666543
No 249
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=2.3e-12 Score=136.74 Aligned_cols=266 Identities=12% Similarity=0.041 Sum_probs=142.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|++..... ...+.+.+++++...+...++.... .........++ ||++|++....+ +.-.+|.
T Consensus 57 ~spdg~~l~~~~~~~-----~~~~~v~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~--dg~~l~~~~~~~-~~v~~~~ 126 (361)
T 3scy_A 57 PSADGKFVYSVNEFS-----KDQAAVSAFAFDKEKGTLHLLNTQK--TMGADPCYLTT--NGKNIVTANYSG-GSITVFP 126 (361)
T ss_dssp ECTTSSEEEEEECCS-----STTCEEEEEEEETTTTEEEEEEEEE--CSSSCEEEEEE--CSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEEEccC-----CCCCcEEEEEEeCCCCcEEEeeEec--cCCCCcEEEEE--CCCEEEEEECCC-CEEEEEE
Confidence 478998887665321 1224565666655434444443221 00122334445 899886654322 3333444
Q ss_pred EecCCcceE---EEecCC-cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004141 129 LWSQSQLEK---EFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 129 ~~~~~~~~~---~~~~~~-~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+..++.... ...... +....--......++.|||||++|++...
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-------------------------------- 174 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL-------------------------------- 174 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET--------------------------------
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC--------------------------------
Confidence 433333221 111110 10000000001136899999998887632
Q ss_pred cCCcCcccCCccCceEEEEEccCCc-------e------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeee
Q 004141 205 EEDWGETYAGKRQPSLFVININSGE-------V------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 271 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~-------~------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g 271 (771)
....|++|+++... . ..+. .+....+..++|||||+. |+++..
T Consensus 175 -----------~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~----l~v~~~-------- 230 (361)
T 3scy_A 175 -----------GTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKF----AYLINE-------- 230 (361)
T ss_dssp -----------TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSE----EEEEET--------
T ss_pred -----------CCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCE----EEEEcC--------
Confidence 12466777665432 1 1111 333445678999999996 665541
Q ss_pred eeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec------CCCCccccceeecCCCCEEEEEecCCCCCCCCc
Q 004141 272 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAH 345 (771)
Q Consensus 272 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l------t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~ 345 (771)
....|+++++ .++..+.+ .........++|||||++|+......
T Consensus 231 ------~~~~v~v~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~------- 280 (361)
T 3scy_A 231 ------IGGTVIAFRY-----------------ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK------- 280 (361)
T ss_dssp ------TTCEEEEEEE-----------------ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS-------
T ss_pred ------CCCeEEEEEe-----------------cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC-------
Confidence 2236777777 44433222 11122346889999999886655431
Q ss_pred cccccceeeecC--CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCC
Q 004141 346 SATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG 423 (771)
Q Consensus 346 ~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg 423 (771)
...|.++++. ++....+ ..+.. + ..+..++|+|||++|++.....+...+|.+|.++|
T Consensus 281 --~~~i~v~~~~~~~g~~~~~--------~~~~~---g-------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 281 --ADGVAIFKVDETNGTLTKV--------GYQLT---G-------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp --SCEEEEEEECTTTCCEEEE--------EEEEC---S-------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred --CCEEEEEEEcCCCCcEEEe--------eEecC---C-------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 1345666554 4432111 00000 0 12456789999998887776677888999999999
Q ss_pred cEEEecC
Q 004141 424 ELLRITP 430 (771)
Q Consensus 424 ~~~~l~~ 430 (771)
+++.+..
T Consensus 341 ~~~~~~~ 347 (361)
T 3scy_A 341 LLTDIKK 347 (361)
T ss_dssp CEEECSC
T ss_pred cEeecce
Confidence 9887753
No 250
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.4e-12 Score=139.25 Aligned_cols=293 Identities=6% Similarity=0.025 Sum_probs=166.6
Q ss_pred CCCCcceEEEEEeech--hhcccceeEEEEEEeecCCCC-ccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004141 49 GNGNGTQAMFSISQPN--LLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.+|||+.+.++.+... +......+.+.+|++...... ...... ....+..++|||||++|+.....+
T Consensus 20 ~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg----- 89 (416)
T 2pm9_A 20 WSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ-----VDSKFNDLDWSHNNKIIAGALDNG----- 89 (416)
T ss_dssp BCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC-----CSSCEEEEEECSSSSCEEEEESSS-----
T ss_pred eCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe-----cCCceEEEEECCCCCeEEEEccCC-----
Confidence 4678885555432110 001123456777777443211 111111 124588999999999998876543
Q ss_pred EEEEec-CC---cceEEEecCCcccccccCCCcccceeecCC-CCeEEEEecCCCCCCCCccCCCCC------CC---CC
Q 004141 126 QFELWS-QS---QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSLGSTK------GG---SS 191 (771)
Q Consensus 126 ~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD-g~~la~~~~~~~~~~~~~~~~~~~------~~---~~ 191 (771)
.+.+|+ .. ....+..+. ...+ .+..+.|+|| ++.|+..+.+.... .|+..... .. ..
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~~l~s~~~dg~v~--iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFS-NHSS------SVKTVKFNAKQDNVLASGGNNGEIF--IWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECC-CSSS------CCCEEEECSSSTTBEEEECSSSCEE--BCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEeecccccccccchhhcc-CCcc------ceEEEEEcCCCCCEEEEEcCCCeEE--EEECCCCcccccccccccccc
Confidence 344552 11 112222221 1111 2268999999 77777766554332 33322221 11 11
Q ss_pred CccCCCCCCcccccCCcC-cccCCccCceEEEEEccCCceeeccCCCC-----CCccceEEEecCCCCCccEEEEEeecC
Q 004141 192 DKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 192 ~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-----~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
...+........|.++.+ ..+++.....|.+||+.+++......... ...+..++|+|||+. +++++..+
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~d 236 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST----RVATATGS 236 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT----EEEEEECC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC----EEEEEECC
Confidence 122344445677888844 34455667889999999887655421221 456889999999976 66665221
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-c-ceecC-CCCccccceeecC-CCCEEEEEecCCCCC
Q 004141 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P-VVNLT-ESISSAFFPRFSP-DGKFLVFLSAKSSVD 341 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~-~~~lt-~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~ 341 (771)
+ ....|+++|+ .++ . ...+. .+...+....||| ||+.|+..+.+
T Consensus 237 ~-----------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---- 284 (416)
T 2pm9_A 237 D-----------NDPSILIWDL-----------------RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD---- 284 (416)
T ss_dssp S-----------SSCCCCEEET-----------------TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS----
T ss_pred C-----------CCceEEEEeC-----------------CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC----
Confidence 1 1126788887 433 2 34444 5667789999999 89988877654
Q ss_pred CCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004141 342 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 342 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
..|.+||+.+++.... +.. +...+..++|+||+..++++...++...|| ++.
T Consensus 285 -------g~v~~wd~~~~~~~~~----------~~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw--~~~ 336 (416)
T 2pm9_A 285 -------NTVLLWNPESAEQLSQ----------FPA---------RGNWCFKTKFAPEAPDLFACASFDNKIEVQ--TLQ 336 (416)
T ss_dssp -------SEEEEECSSSCCEEEE----------EEC---------SSSCCCCEEECTTCTTEEEECCSSSEEEEE--ESC
T ss_pred -------CCEEEeeCCCCcccee----------ecC---------CCCceEEEEECCCCCCEEEEEecCCcEEEE--Ecc
Confidence 2588999877653211 000 112356789999995566776666666666 554
Q ss_pred CCc
Q 004141 422 SGE 424 (771)
Q Consensus 422 tg~ 424 (771)
+++
T Consensus 337 ~~~ 339 (416)
T 2pm9_A 337 NLT 339 (416)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 251
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.47 E-value=1e-13 Score=143.45 Aligned_cols=207 Identities=14% Similarity=0.126 Sum_probs=129.5
Q ss_pred CceEEEEEEecCCCCC-CCCCcEEEEEcCCCCCCCCCcchHHHHHHHH------CCcEEEEECCCCCCCCChhhhhc---
Q 004141 518 QKPFEAIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQS--- 587 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~-~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~Vv~~d~rG~~~~g~~~~~~--- 587 (771)
|.+...++|.|+++.+ .+++|+|+++||... ........+.+.. .+++||++++.. ...++...
T Consensus 23 ~~~r~~~VylP~~y~~~~~~yPVlylldG~~~---f~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~---R~~dytp~~~~ 96 (331)
T 3gff_A 23 KETREYVIALPEGYAQSLEAYPVVYLLDGEDQ---FDHMASLLQFLSQGTMPQIPKVIIVGIHNTN---RMRDYTPTHTL 96 (331)
T ss_dssp TEEEEEEEECCTTGGGSCCCEEEEEESSHHHH---HHHHHHHHHHHTCSSSCSSCCCEEEEECCSS---HHHHSCSSCCS
T ss_pred CCeEEEEEEeCCCCCCCCCCccEEEEecChhh---hHHHHHHHHHHHhhhhcCCCCEEEEEECCCC---cccccCCCccc
Confidence 5678899999998755 688999999999421 0111223344433 358899988621 11111000
Q ss_pred --CCC---------CccccchhhHH--HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchh
Q 004141 588 --LPG---------KVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 654 (771)
Q Consensus 588 --~~~---------~~~~~~~~D~~--~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~ 654 (771)
..+ ..+.....+.+ +.+.++.++..+++.| +|+||||||+++++++.++|+.|+++++.+|.+.+.
T Consensus 97 ~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~ 175 (331)
T 3gff_A 97 VLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFD 175 (331)
T ss_dssp BCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTT
T ss_pred cccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCC
Confidence 000 01111222222 3445666665566555 899999999999999999999999999999974211
Q ss_pred hhhcCCCCCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCC-------ccCcHHHHHHH
Q 004141 655 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-------RVPVSNGLQYA 727 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~-------~vp~~~~~~~~ 727 (771)
. ... ....... .........|+++.+|+.|. .++...+++++
T Consensus 176 ~------------~~~--------------~~~~~~~-----~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~ 224 (331)
T 3gff_A 176 S------------PHY--------------LTLLEER-----VVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFA 224 (331)
T ss_dssp T------------THH--------------HHHHHHH-----HHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHH
T ss_pred h------------HHH--------------HHHHHHH-----hhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHH
Confidence 0 000 0000111 11111245799999999999 57778889999
Q ss_pred HHHHhC---CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004141 728 RALREK---GVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 728 ~~l~~~---g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl 766 (771)
+.|+.. |+++++.++|+++|+... ...+...++||
T Consensus 225 ~~Lk~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~l 262 (331)
T 3gff_A 225 DKLTKLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHL 262 (331)
T ss_dssp HHHHHHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHH
T ss_pred HHHHhccCCCceEEEEECCCCCccccH----HHHHHHHHHHH
Confidence 999986 678999999999997542 23344445544
No 252
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.47 E-value=9.2e-12 Score=131.91 Aligned_cols=279 Identities=10% Similarity=0.011 Sum_probs=173.7
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|+... ..+.+.+|++... .....+.. ....+...+|+|||++|+.....+ .+.
T Consensus 40 ~s~~~~~l~~~~---------~dg~i~vwd~~~~-~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~dg-----~i~ 99 (369)
T 3zwl_B 40 YNKEGDLLFSCS---------KDSSASVWYSLNG-ERLGTLDG-----HTGTIWSIDVDCFTKYCVTGSADY-----SIK 99 (369)
T ss_dssp ECTTSCEEEEEE---------SSSCEEEEETTTC-CEEEEECC-----CSSCEEEEEECTTSSEEEEEETTT-----EEE
T ss_pred EcCCCCEEEEEe---------CCCEEEEEeCCCc-hhhhhhhh-----cCCcEEEEEEcCCCCEEEEEeCCC-----eEE
Confidence 366777776643 2346777766332 22222221 225688899999999998876543 455
Q ss_pred Ee--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004141 129 LW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+| ..++..........+ ..+.|+|||+.|+......
T Consensus 100 iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~~~-------------------------------- 137 (369)
T 3zwl_B 100 LWDVSNGQCVATWKSPVPV----------KRVEFSPCGNYFLAILDNV-------------------------------- 137 (369)
T ss_dssp EEETTTCCEEEEEECSSCE----------EEEEECTTSSEEEEEECCB--------------------------------
T ss_pred EEECCCCcEEEEeecCCCe----------EEEEEccCCCEEEEecCCc--------------------------------
Confidence 55 344444444433333 6899999999998875431
Q ss_pred CcCcccCCccCceEEEEEccCCce------------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004141 207 DWGETYAGKRQPSLFVININSGEV------------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~~~~~------------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
......|.+||+..+.. ..+........+..+.|+|||+. |+..+
T Consensus 138 -------~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~------------ 194 (369)
T 3zwl_B 138 -------MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY----IIAGH------------ 194 (369)
T ss_dssp -------TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE----EEEEE------------
T ss_pred -------cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE----EEEEc------------
Confidence 01236788888766532 11211122226778899999997 77654
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCC--CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccce
Q 004141 275 CYNRPCALYAVRVSLYKSEASELELKESSSED--LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH 352 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~ 352 (771)
....|+++|+ .+ .....+..+...+....|+|||+.|+..+.+ ..|.
T Consensus 195 ---~dg~i~i~d~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~ 243 (369)
T 3zwl_B 195 ---KDGKISKYDV-----------------SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD-----------TNSF 243 (369)
T ss_dssp ---TTSEEEEEET-----------------TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----------SEEE
T ss_pred ---CCCEEEEEEC-----------------CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC-----------ceEE
Confidence 3347888998 43 3345555666778999999999999877654 2588
Q ss_pred eeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC-----------eeEEEEEECC
Q 004141 353 RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS-----------SQVIISVNVS 421 (771)
Q Consensus 353 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~-----------~~~l~~~d~~ 421 (771)
+||+.+++....... ...+..++|+|+++.+++....++ ...+..+|..
T Consensus 244 v~d~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 244 LVDVSTLQVLKKYET--------------------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEETTTCCEEEEEEC--------------------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EEECCCCceeeeecC--------------------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 999887654211110 012346789999998877654331 1257777888
Q ss_pred CCcEEEec-CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 422 SGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 422 tg~~~~l~-~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+++..... .....+....|+++++.|+....+ ..+.+.++..
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred CCcchhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 87765443 344456667899999877765432 3566666654
No 253
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.46 E-value=3.9e-12 Score=132.55 Aligned_cols=193 Identities=15% Similarity=0.155 Sum_probs=127.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++|+.....+ .+.+| ..+........... ....++|||||+.|+..+.+
T Consensus 123 ~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~~~~~~~~~~~---------~v~~~~~spdg~~lasg~~d--- 185 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGKKEYSLDTRGK---------FILSIAYSPDGKYLASGAID--- 185 (321)
T ss_dssp TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTCSEEEEEECSSS---------CEEEEEECTTSSEEEEEETT---
T ss_pred ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCceeEEecCCCc---------eEEEEEECCCCCEEEEEcCC---
Confidence 3466789999999998765432 34455 23333222222111 12589999999999886432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
..|.+||+.+++..... ......+..++|+|||+.
T Consensus 186 -----------------------------------------g~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spd~~~--- 220 (321)
T 3ow8_A 186 -----------------------------------------GIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL--- 220 (321)
T ss_dssp -----------------------------------------SCEEEEETTTTEEEEEE-CCCSSCCCEEEECTTSCE---
T ss_pred -----------------------------------------CeEEEEECCCCcEEEEE-cccCCceeEEEEcCCCCE---
Confidence 57899999988765441 234456889999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+..+ .+..|.++|+ ..++ ...+..+...+...+|+|||+.|+..+
T Consensus 221 -l~s~s---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 221 -LVTAS---------------DDGYIKIYDV-----------------QHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp -EEEEC---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -EEEEc---------------CCCeEEEEEC-----------------CCcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 76655 2336888887 4443 456666777789999999999988777
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
.+. .|.+||+.+++......+ +...+..++|+|||+.| ++...++...|
T Consensus 268 ~D~-----------~v~iwd~~~~~~~~~~~~-------------------h~~~v~~v~~s~~g~~l-~s~~~d~~i~v 316 (321)
T 3ow8_A 268 SDK-----------SVKVWDVGTRTCVHTFFD-------------------HQDQVWGVKYNGNGSKI-VSVGDDQEIHI 316 (321)
T ss_dssp TTS-----------CEEEEETTTTEEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTCCEEE
T ss_pred CCC-----------cEEEEeCCCCEEEEEEcC-------------------CCCcEEEEEECCCCCEE-EEEeCCCeEEE
Confidence 653 488899877553211000 01134567899999866 55566676667
Q ss_pred EE
Q 004141 416 IS 417 (771)
Q Consensus 416 ~~ 417 (771)
|-
T Consensus 317 wd 318 (321)
T 3ow8_A 317 YD 318 (321)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 254
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.7e-11 Score=134.25 Aligned_cols=260 Identities=12% Similarity=0.044 Sum_probs=151.9
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCcceEEEec---CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHV---PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+..++|||||++|+++...+ +.-.+|.+.. .+...+.+.. ...+ .+++|||||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v----------~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRP----------NAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCE----------EEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCc----------eEEEEcCCCCEEEEEeC---
Confidence 478899999999986555433 3334444431 4444444431 2222 58999999999988632
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceee----ccCCCCCCccceEEEecC-
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA----VKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~----l~~~~~~~~~~~~~wspD- 250 (771)
...+++|++.+++... .. ......+..+.|+||
T Consensus 170 -----------------------------------------~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~ 207 (450)
T 2vdu_B 170 -----------------------------------------FGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDS 207 (450)
T ss_dssp -----------------------------------------TSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECT
T ss_pred -----------------------------------------CCcEEEEecCCcccccccceee-ecccCceEEEEEcCCC
Confidence 2578999988776542 10 223346788999999
Q ss_pred --CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-ee-cCCCCccccceeecC
Q 004141 251 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VN-LTESISSAFFPRFSP 326 (771)
Q Consensus 251 --g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~-lt~~~~~~~~p~~Sp 326 (771)
++. |+..+ .+..|+++|+ .++.. .. +..+...+..+.||
T Consensus 208 ~~~~~----l~s~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 208 DGHQF----IITSD---------------RDEHIKISHY-----------------PQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp TSCEE----EEEEE---------------TTSCEEEEEE-----------------SCTTCEEEECCCCSSCEEEEEEC-
T ss_pred CCCcE----EEEEc---------------CCCcEEEEEC-----------------CCCceeeeeecCCCCceEEEEEC-
Confidence 775 66554 2347888887 44443 33 44666778999999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc--CCCCCc----ccccCCCCCCccccCC
Q 004141 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA--EGDCFP----GLYSSSILSNPWLSDG 400 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~f~----g~~~~~~~~~~~s~Dg 400 (771)
||+.|+..+.+ ..|.+||+.+++..........+..+.... ....|. ......+..+.|+||+
T Consensus 251 d~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 251 KDYLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp STTEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999877754 358999998876422111000000000000 000000 0011234567899999
Q ss_pred CEEEEEeeeCCeeEEEEE-ECCCCcEE---EecCCCCCceeeEEeecCCEEEEEEeCCCCCC------eEEEEEec
Q 004141 401 CTMLLSSIWGSSQVIISV-NVSSGELL---RITPAESNFSWSLLTLDGDNIIAVSSSPVDVP------QVKYGYFV 466 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~-d~~tg~~~---~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~------~l~~~~~~ 466 (771)
+.|++....++...||.+ +..+++++ .+... ..+....|++ +.++++..+...|. ++|.++..
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 988776645666677766 33333333 23333 3344456666 45777777766664 66665543
No 255
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=6.6e-12 Score=132.31 Aligned_cols=285 Identities=12% Similarity=0.153 Sum_probs=162.1
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.+...+|||||++||..+... .+.+| .++..........+..+. +..++|||||++|+..+.+...+
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~------v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGHQRT------VRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSCSSC------EEEEEECTTSSEEEEEETTSCEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccccCCc------EEEEEECCCCCEEEEEECCCcEE
Confidence 477899999999999876543 34455 222221111111222222 36899999999999988766433
Q ss_pred CCCccCCCCC--CCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce----eeccCCCCCCccceEEEecCC
Q 004141 178 KPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVKGIPKSLSVGQVVWAPLN 251 (771)
Q Consensus 178 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~----~~l~~~~~~~~~~~~~wspDg 251 (771)
.|...... .......+......+.|.++....+++..+..|.+||+.++.. ..+ ......+..++|+|||
T Consensus 87 --iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 87 --IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL--NSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp --EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE--CCCCSCEEEEEECSSS
T ss_pred --EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe--cCcCCCeEEEEECCCC
Confidence 23321111 0111223344445677888866666777788999999987642 223 2344567889999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---ceecCCCCccccceeecCCC
Q 004141 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG 328 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~lt~~~~~~~~p~~SpDG 328 (771)
+. |+..+. +..|.++|+ ..+. ...+..+...+.+.+|||||
T Consensus 163 ~~----l~s~s~---------------d~~i~~w~~-----------------~~~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 163 EL----LASASY---------------DDTVKLYRE-----------------EEDDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp SC----EEEEET---------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEECTTS
T ss_pred CE----EEEEeC---------------CCcEEEEEe-----------------cCCCEEEEEEecCCCCceEEEEECCCC
Confidence 98 887662 224666665 3332 24566677788999999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCC-CCCcc-ceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEE
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~ 406 (771)
++|+..+.+. .|.+|+....+. ..+.. ........+. .+.+.....+..++|++++..| ++
T Consensus 207 ~~l~s~s~D~-----------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~h~~~v~~v~~~~~~~~l-~s 269 (345)
T 3fm0_A 207 QRLASCSDDR-----------TVRIWRQYLPGNEQGVACSGSDPSWKCIC-----TLSGFHSRTIYDIAWCQLTGAL-AT 269 (345)
T ss_dssp SEEEEEETTS-----------CEEEEEEECTTCTTCCCCC---CEEEEEE-----EECSSCSSCEEEEEECTTTCCE-EE
T ss_pred CEEEEEeCCC-----------eEEEeccccCCCCccceeeccCCccceeE-----EecCCCCCcEEEEEEecCCCEE-EE
Confidence 9998877663 366666432221 11110 0000000000 0011112235578899999865 45
Q ss_pred eeeCCeeEEEEEECCCCc----E---EEe-cCCCCCceeeEEeecCCEEEEEEe
Q 004141 407 SIWGSSQVIISVNVSSGE----L---LRI-TPAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 407 ~~~~~~~~l~~~d~~tg~----~---~~l-~~~~~~~~~~~~s~dg~~l~~~~~ 452 (771)
...++...+|.++..... . ..+ ......+....|+|++..++++.+
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 556677778866543211 1 111 122334566778888764555544
No 256
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=2.4e-11 Score=129.05 Aligned_cols=270 Identities=12% Similarity=0.060 Sum_probs=136.9
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCe-EEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~-la~~~~~~~~~~ 178 (771)
.....+|||||++|+..... .-.+|.+...++..++..... .+. ...++|||||++ ++|++......
T Consensus 41 ~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~~--~g~------~~~~~~spdg~~l~~~~~~~~~~~- 108 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHPI--GGH------PRANDADTNTRAIFLLAAKQPPYA- 108 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEEC--CSS------GGGGCTTSCCEEEEEEECSSTTCC-
T ss_pred CCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEeec--CCC------CccEEECCCCCEEEEEEecCCcce-
Confidence 35678999999988655432 222333322455444433211 111 146899999997 45554411000
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceee-ccCC--CCCCccceEEEecCCCCC
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQA-VKGI--PKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~-l~~~--~~~~~~~~~~wspDg~~~ 254 (771)
.|.. +.+. ....+.+|+++ .|+... +... .....+..++|||||+.
T Consensus 109 ------------------------~~~~---~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~- 158 (365)
T 1jof_A 109 ------------------------VYAN---PFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY- 158 (365)
T ss_dssp ------------------------EEEE---EESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-
T ss_pred ------------------------eccc---eeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-
Confidence 0000 0000 12457777775 354432 2101 12345678999999996
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC-CCcceec---C--CCCccccceeecCCC
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-DLPVVNL---T--ESISSAFFPRFSPDG 328 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~l---t--~~~~~~~~p~~SpDG 328 (771)
|++.. . ....|+++++ + +++.+.+ . .+.......+|||||
T Consensus 159 ---l~~~~-~-------------~~~~v~~~~~-----------------~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 159 ---LYSAD-L-------------TANKLWTHRK-----------------LASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ---EEEEE-T-------------TTTEEEEEEE-----------------CTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred ---EEEEc-C-------------CCCEEEEEEE-----------------CCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 65443 1 1237888887 4 4554322 1 113346778999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc-----cCCCCCCc-cccCCCE
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY-----SSSILSNP-WLSDGCT 402 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~-----~~~~~~~~-~s~Dg~~ 402 (771)
++|+...... +...+|.+|..+++.... . ..+..+.. .+.|.- ......++ |||||++
T Consensus 205 ~~l~v~~~~~--------~~v~v~~~~~~~g~~~~~---~-~~~~~~~~----~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 205 NYLYALMEAG--------NRICEYVIDPATHMPVYT---H-HSFPLIPP----GIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp SEEEEEETTT--------TEEEEEEECTTTCCEEEE---E-EEEESSCT----TCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CEEEEEECCC--------CeEEEEEEeCCCCcEEEc---c-ceEEcCCC----CcCCcccccccccccccEEEECCCCCE
Confidence 9887665432 122344444434432100 0 00111100 010000 00134578 9999998
Q ss_pred EEEEeeeCC-----eeEEEEEECCCCcEEEe----cCCCCCceeeEEee---cCCEEEEEEeCCCCCCeEEEEEe
Q 004141 403 MLLSSIWGS-----SQVIISVNVSSGELLRI----TPAESNFSWSLLTL---DGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 403 l~~~~~~~~-----~~~l~~~d~~tg~~~~l----~~~~~~~~~~~~s~---dg~~l~~~~~~~~~p~~l~~~~~ 465 (771)
|+.+....+ ...+|.++. +|+++.+ ...........|+| ||++|+++.... ..+.+.+.
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~---~~v~v~~~ 339 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE---GWLEIYRW 339 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS---CEEEEEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC---CeEEEEEE
Confidence 876554333 455665543 6777652 11222234567899 899887654322 34555554
No 257
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.43 E-value=5.5e-12 Score=132.60 Aligned_cols=268 Identities=12% Similarity=0.097 Sum_probs=163.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||||++|+..+..+ .+.+|+ .+........... .+..++|||||+.|+..+.+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLRSS---------WVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECSSS---------CEEEEEECTTSSEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecCCc---------cEEEEEECCCCCEEEEEeCCCeE
Confidence 4578899999999998776544 566773 3333332222111 12588999999999988765432
Q ss_pred CCCCccCCCCCCC----CCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004141 177 SKPTFSLGSTKGG----SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 177 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
+ .|........ .....+........|.++ +..+++.....|.+||+.+++..... ......+..+.|+|||+
T Consensus 122 ~--iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 S--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp E--EEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred E--EEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCC
Confidence 2 2222111100 001112222223345554 44666667789999999988765441 33445688999999998
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEE
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l 331 (771)
. |+..+ .+..|.++|+ .++. ...+..+...+....|+|||+.|
T Consensus 198 ~----l~sg~---------------~d~~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 198 L----FVSGA---------------CDASAKLWDV-----------------REGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred E----EEEEe---------------CCCcEEEEEC-----------------CCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 6 66554 2347888887 4444 45566677778999999999998
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004141 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~ 411 (771)
+..+.+. .|.+||+.+++.... ... ... ...+..++|+|||+.|+ +...++
T Consensus 242 ~s~s~d~-----------~v~iwd~~~~~~~~~----------~~~--~~~-----~~~v~~~~~s~~g~~l~-~g~~d~ 292 (340)
T 1got_B 242 ATGSDDA-----------TCRLFDLRADQELMT----------YSH--DNI-----ICGITSVSFSKSGRLLL-AGYDDF 292 (340)
T ss_dssp EEEETTS-----------CEEEEETTTTEEEEE----------ECC--TTC-----CSCEEEEEECTTSSEEE-EEETTS
T ss_pred EEEcCCC-----------cEEEEECCCCcEEEE----------Ecc--CCc-----ccceEEEEECCCCCEEE-EECCCC
Confidence 8777553 488899876543110 000 000 01244678999998654 444455
Q ss_pred eeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEE
Q 004141 412 SQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
. +..+|+.+++... +......+....|++++..|+...
T Consensus 293 ~--i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 293 N--CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp E--EEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred e--EEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 4 4555776766543 444444556678888888776544
No 258
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.43 E-value=2.1e-12 Score=127.64 Aligned_cols=211 Identities=13% Similarity=0.064 Sum_probs=130.9
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCc--EEEEECCCCCCC--C-Chhh---hhc-----CCCC-ccc--cchhhH
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLG--F-GEEA---LQS-----LPGK-VGS--QDVNDV 600 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~--~Vv~~d~rG~~~--~-g~~~---~~~-----~~~~-~~~--~~~~D~ 600 (771)
.+.||++||.+.+ ...|...+..|++.|| .|+.+|.++.+. + |.-. .+. ...+ .+. ...+++
T Consensus 6 ~~pvvliHG~~~~--~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYGGS--ERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTTCC--GGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCCCC--hhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 4568999996654 5578889999999996 588888775321 0 1000 000 0000 001 124567
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC-----ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCC
Q 004141 601 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 675 (771)
Q Consensus 601 ~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (771)
.++++.+.++. +.+++.++||||||.+++.++.++|. +++.+|++++..+....... .... ..+..
T Consensus 84 ~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~---~~~~~-- 154 (249)
T 3fle_A 84 KEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE--NVNE---IIVDK-- 154 (249)
T ss_dssp HHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS--CTTT---SCBCT--
T ss_pred HHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC--Ccch---hhhcc--
Confidence 77788887763 45689999999999999999998863 68888888766543221110 0000 00000
Q ss_pred CccCCCCCC--hhhHHHHhhcCcccccCCCCCcEEEEeeC------CCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--C
Q 004141 676 KDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--D 745 (771)
Q Consensus 676 ~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~lii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~ 745 (771)
.+.|. ......+... ...+.+.++|+|.|+|+ .|..||...++.+...++......+.+.+.| +
T Consensus 155 ----~g~p~~~~~~~~~l~~~--~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a 228 (249)
T 3fle_A 155 ----QGKPSRMNAAYRQLLSL--YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKA 228 (249)
T ss_dssp ----TCCBSSCCHHHHHTGGG--HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGG
T ss_pred ----cCCCcccCHHHHHHHHH--HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCC
Confidence 11111 1112222211 23344467899999998 6999999999888777776655666667765 8
Q ss_pred CccCCCCCChHHHHHHHHHHH
Q 004141 746 VHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~fl 766 (771)
.|..... + .++.+.|..||
T Consensus 229 ~Hs~l~~-n-~~V~~~I~~FL 247 (249)
T 3fle_A 229 QHSQLHE-N-KDVANEIIQFL 247 (249)
T ss_dssp STGGGGG-C-HHHHHHHHHHH
T ss_pred chhcccc-C-HHHHHHHHHHh
Confidence 8976533 3 37888888887
No 259
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.42 E-value=1.4e-11 Score=127.78 Aligned_cols=274 Identities=14% Similarity=0.154 Sum_probs=162.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++||.....+ .+.+| ..++..+...... + .+..++|+|||+.|+..+.+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISGHK---L------GISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCCS---S------CEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhccCC---C------ceEEEEEcCCCCEEEEECCCCEE
Confidence 4578899999999998876543 45566 2344333332211 1 12689999999999988766533
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+............+........|.++....+++.....|.+||+.+++..... ......+..+.|+|||+.
T Consensus 90 ~--vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~--- 163 (312)
T 4ery_A 90 K--IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSL--- 163 (312)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE---
T ss_pred E--EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCE---
Confidence 2 3332222111112223333344567777666666777889999999988754431 334456788999999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecC-CCCccccceeecCCCCEEEEE
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+..+ .+..|.++|+ .+++. ..+. .....+....|+|||++|+..
T Consensus 164 -l~~~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 164 -IVSSS---------------YDGLCRIWDT-----------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred -EEEEe---------------CCCcEEEEEC-----------------CCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 76655 2347888887 44443 3333 333457778999999998877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCCee
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~Dg~~l~~~~~~~~~~ 413 (771)
+.+ ..|.+||+.+++.... +....... ......|+ ++++ ++++...++.
T Consensus 211 ~~d-----------~~i~iwd~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~-~l~sg~~dg~- 260 (312)
T 4ery_A 211 TLD-----------NTLKLWDYSKGKCLKT----------YTGHKNEK-------YCIFANFSVTGGK-WIVSGSEDNL- 260 (312)
T ss_dssp ETT-----------TEEEEEETTTTEEEEE----------ECSSCCSS-------SCCCEEEECSSSC-EEEECCTTSC-
T ss_pred cCC-----------CeEEEEECCCCcEEEE----------EEecCCce-------EEEEEEEEeCCCc-EEEEECCCCE-
Confidence 654 3588899877543211 10000000 01122344 4555 5556555555
Q ss_pred EEEEEECCCCcEEEec-CCCCCceeeEEeecCCEEEEEEeCCCC
Q 004141 414 VIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~dg~~l~~~~~~~~~ 456 (771)
|..+|+.+++..... .....+....++|+++.++....+.+.
T Consensus 261 -i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 261 -VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp -EEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred -EEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 445578788765443 333445556788888877655433333
No 260
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.41 E-value=6.5e-12 Score=127.47 Aligned_cols=217 Identities=15% Similarity=0.134 Sum_probs=132.8
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECC--------CCCCCCChhhhhc--
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQS-- 587 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~--------rG~~~~g~~~~~~-- 587 (771)
...+...+|.|.+ ..++.|+||.+||+... ..+||+|+.+++ +|+.++|. +.+.
T Consensus 89 s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 89 SISFTVTITYPSS--GTAPYPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEEECCSS--SCSSEEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eeEEEEEEECCCC--CCCCccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCcccee-cccccC
Confidence 3568889999974 35788999999985321 257999999987 55555654 3211
Q ss_pred CCCCccccc--hhhHHHHHHHHHHcC--CCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh------
Q 004141 588 LPGKVGSQD--VNDVLTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------ 657 (771)
Q Consensus 588 ~~~~~~~~~--~~D~~~~i~~l~~~~--~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~------ 657 (771)
....++... .-++.++++||..++ .+|++||+++|||+||..|+++++.. ++|+++|..++..+-....
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~R~~~~~ 231 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACWRISDYL 231 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhhhhhhhh
Confidence 123344333 358999999999987 89999999999999999999999985 5899999887654321110
Q ss_pred ---cCCC--------CCcchhhhhccCCCCccCCCCCChhhHHHHhhcCccc---ccCCC-CCcEEEEeeCCCCccCcHH
Q 004141 658 ---GTTD--------IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS---HISKV-KTPTIFLLGAQDLRVPVSN 722 (771)
Q Consensus 658 ---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~~~i-~~P~lii~G~~D~~vp~~~ 722 (771)
+..- ...|+. .. ...|... ...-|++ .+.-+ ..|+|++.| +|..++++.
T Consensus 232 ~~~Ge~v~~~~~~~~e~~Wf~-~~-----~~~y~~~---------~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g 295 (375)
T 3pic_A 232 KSQGANIQTASEIIGEDPWFS-TT-----FNSYVNQ---------VPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQS 295 (375)
T ss_dssp HHTTCCCCCHHHHTTTCSCSC-GG-----GGGTTTC---------GGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHH
T ss_pred cccCccccccccccCcccccc-cc-----hhhhccc---------ccccCcCHHHHHHHhCCceEEEecC-CCcccCcHH
Confidence 1000 001110 00 0000000 0001111 12222 257999999 999998876
Q ss_pred HHHHHHHH----HhCCC--CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 723 GLQYARAL----REKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 723 ~~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
....+..+ +..|. ++.+....+.+|+.. +. +..+++.+||+++|+
T Consensus 296 ~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~f-p~---~~~~~~~~F~~k~L~ 346 (375)
T 3pic_A 296 CFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAF-PS---NQQSQLTAFVQKFLL 346 (375)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCC-CG---GGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeeCCCccccC-CH---HHHHHHHHHHHHHhC
Confidence 55444444 33454 466654333345322 22 234789999999985
No 261
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.40 E-value=7e-12 Score=131.80 Aligned_cols=230 Identities=12% Similarity=0.097 Sum_probs=141.0
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecC
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVP 142 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 142 (771)
+......+.|.+|++..... ...+. ..+......+...+|||||++||..+... .+.+|+ .++..+....
T Consensus 96 l~~~s~dg~v~lWd~~~~~~-~~~~~-~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~~- 167 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENET-LIVSK-FCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSYRA- 167 (344)
T ss_dssp EEEEETTSEEEEEEECTTSS-CEEEE-EEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC-
T ss_pred EEEEECCCEEEEEeccCCCc-eeEee-ccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcC-
Confidence 33444556788888754422 11111 00111224588899999999998776543 456663 3333222221
Q ss_pred CcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEE
Q 004141 143 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 222 (771)
Q Consensus 143 ~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v 222 (771)
..+. +..+.|+||++.++..+. .+..|.+
T Consensus 168 --h~~~------V~~~~~~~~~~~~l~s~s-------------------------------------------~D~~v~i 196 (344)
T 4gqb_B 168 --HAAQ------VTCVAASPHKDSVFLSCS-------------------------------------------EDNRILL 196 (344)
T ss_dssp --CSSC------EEEEEECSSCTTEEEEEE-------------------------------------------TTSCEEE
T ss_pred --cCCc------eEEEEecCCCCCceeeec-------------------------------------------ccccccc
Confidence 1112 268999999986655432 2257899
Q ss_pred EEccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhc
Q 004141 223 ININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKE 301 (771)
Q Consensus 223 ~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 301 (771)
||+.+++.... ........+..+.|+|++.. ++.++. .+..|.++|+
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~l~sg~--------------~dg~v~~wd~-------------- 244 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE----VFVFGD--------------ENGTVSLVDT-------------- 244 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEES--------------
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCc----ceEEec--------------cCCcEEEEEC--------------
Confidence 99988876543 11122335678899998877 766552 2347888888
Q ss_pred CCCCCCc-ceecCCCCccccceeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccC
Q 004141 302 SSSEDLP-VVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE 379 (771)
Q Consensus 302 ~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 379 (771)
.+++ ...+..+...+...+|||||.. |+..+.+ ..|.+||+.+++...+..
T Consensus 245 ---~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----------~~i~vwd~~~~~~~~~~~------------- 297 (344)
T 4gqb_B 245 ---KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED-----------CSLAVLDSSLSELFRSQA------------- 297 (344)
T ss_dssp ---CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTCCEEEEECC-------------
T ss_pred ---CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----------CeEEEEECCCCcEEEEcC-------------
Confidence 4444 4567777778899999999965 5555544 248889987765321100
Q ss_pred CCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004141 380 GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 380 ~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 419 (771)
+...+..++|+||++.|+++...++...+|.++
T Consensus 298 -------H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 298 -------HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp -------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred -------CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 112356788999999888888878877777554
No 262
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.6e-11 Score=128.42 Aligned_cols=245 Identities=13% Similarity=0.153 Sum_probs=150.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++|+.....+ .+.+| ..++......... + .+..++|+|||+.|+..+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~s~~~---- 94 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLDGHT---G------TIWSIDVDCFTKYCVTGSA---- 94 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEECCCS---S------CEEEEEECTTSSEEEEEET----
T ss_pred ceEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhhhcC---C------cEEEEEEcCCCCEEEEEeC----
Confidence 4588899999999998765433 34455 3333333332111 1 1268999999999987643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
...|.+||+.+++.... ......+..+.|+|||+.
T Consensus 95 ----------------------------------------dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~--- 129 (369)
T 3zwl_B 95 ----------------------------------------DYSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNY--- 129 (369)
T ss_dssp ----------------------------------------TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSE---
T ss_pred ----------------------------------------CCeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCE---
Confidence 25799999998887666 345557889999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc--cccceeecCCCCEEEEE
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~p~~SpDG~~l~f~ 334 (771)
|+..+.... .....|.++|+....... .+ . .........+..... .+....|+|||+.|+..
T Consensus 130 -l~~~~~~~~----------~~~g~i~~~d~~~~~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 130 -FLAILDNVM----------KNPGSINIYEIERDSATH-EL---T-KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp -EEEEECCBT----------TBCCEEEEEEEEECTTTC-CE---E-EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred -EEEecCCcc----------CCCCEEEEEEecCCccce-ee---c-ccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 777652200 112366666662100000 00 0 000012222223333 67889999999988876
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~ 414 (771)
+.+ ..|++||+.++... ...+.. ....+..++|+||++.|+.. ..++ .
T Consensus 194 ~~d-----------g~i~i~d~~~~~~~---------~~~~~~---------~~~~v~~~~~~~~~~~l~~~-~~d~--~ 241 (369)
T 3zwl_B 194 HKD-----------GKISKYDVSNNYEY---------VDSIDL---------HEKSISDMQFSPDLTYFITS-SRDT--N 241 (369)
T ss_dssp ETT-----------SEEEEEETTTTTEE---------EEEEEC---------CSSCEEEEEECTTSSEEEEE-ETTS--E
T ss_pred cCC-----------CEEEEEECCCCcEe---------EEEEec---------CCCceeEEEECCCCCEEEEe-cCCc--e
Confidence 654 35889998763211 111100 01134567899999976544 3344 4
Q ss_pred EEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCC
Q 004141 415 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~ 454 (771)
|..+|+.+++...............++++++.+++.....
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 6666888888776655555566778999999888776543
No 263
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.40 E-value=1.1e-12 Score=138.91 Aligned_cols=286 Identities=12% Similarity=0.041 Sum_probs=159.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.||||+.|+-..... ...-...+++++............ .. ......+...+|||||+.++ .+.. + .+.
T Consensus 50 fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~~~~~~-~~-~~~~~~V~~~~~s~d~~~l~-~s~d--g---~v~ 118 (357)
T 4g56_B 50 YRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPNESLCT-AG-VQTEAGVTDVAWVSEKGILV-ASDS--G---AVE 118 (357)
T ss_dssp ECSSSCEEEEEECSS---SSSCCEEEEEESSCC---CGGGCS-EE-EECSSCEEEEEEETTTEEEE-EETT--S---CEE
T ss_pred ECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcceeEec-cc-CCCCCCEEEEEEcCCCCEEE-EECC--C---EEE
Confidence 378999888654221 111245677766533321111110 00 01123578899999997654 3332 2 244
Q ss_pred Eec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004141 129 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+|+ .++...........| .+.+.+++|||||++|+..+.+...+ .|+............+......+.|.+
T Consensus 119 lWd~~~~~~~~~~~~~~~~h-----~~~V~~v~~spdg~~l~sgs~dg~v~--iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEH-----DDIVKTLSVFSDGTQAVSGGKDFSVK--VWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp EC--------CCCCEEECCC-----SSCEEEEEECSSSSEEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EeeccccceeEEEeeccCCC-----CCCEEEEEECCCCCEEEEEeCCCeEE--EEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 552 222111111100011 11236899999999999887766433 333222221112222333334556776
Q ss_pred CcCc-ccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004141 207 DWGE-TYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 207 d~g~-~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
+... .+++..+..|.+||+.+++.... ........+..++|+|++.. ++.++. .+..|.+
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~----~la~g~--------------~d~~i~~ 253 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD----TFACGD--------------ETGNVSL 253 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT----EEEEEE--------------SSSCEEE
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc----eEEEee--------------cccceeE
Confidence 6433 34455568899999988875443 11233445778999999887 766652 2336888
Q ss_pred EecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCC
Q 004141 285 VRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 362 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 362 (771)
+|+ .+++ ...+..+...+...+|||||+. |+..+.+ ..|++||+.+++..
T Consensus 254 wd~-----------------~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-----------~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 254 VNI-----------------KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED-----------CTVAVLDADFSEVF 305 (357)
T ss_dssp EES-----------------SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTSCEEE
T ss_pred EEC-----------------CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-----------CEEEEEECCCCcEe
Confidence 887 4443 4556666777899999999965 5544443 34889998876542
Q ss_pred CCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEE
Q 004141 363 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~d 419 (771)
.... +...+..++|+| |++ ++++...++...+|.++
T Consensus 306 ~~~~--------------------H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 306 RDLS--------------------HRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECC--------------------CSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC
T ss_pred EECC--------------------CCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECC
Confidence 2110 111345778998 676 55677777777777654
No 264
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.40 E-value=4.7e-12 Score=131.40 Aligned_cols=214 Identities=12% Similarity=0.058 Sum_probs=122.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHH-HHHHHcCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGLA 613 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~ 613 (771)
+..|.||++||.........|...+..| ..||.|+++|+|| +|.+.. ....++++.+.+ +.+.+. .
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G---~G~~~~-------~~~~~~~~~~~~~~~l~~~--~ 145 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPG---FHGGQA-------LPATLTVLVRSLADVVQAE--V 145 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTT---SSTTCC-------EESSHHHHHHHHHHHHHHH--H
T ss_pred CCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh--c
Confidence 4568899999942222245677888888 7899999999999 543211 111233333322 222222 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHhhC---CCceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCccCCCCCC-hh-
Q 004141 614 NPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPS-VE- 686 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~- 686 (771)
+.+++.|+||||||.++..++.++ |+.++++|+.++....... .....+. +....... ...+..... ..
T Consensus 146 ~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (319)
T 3lcr_A 146 ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG---GRPEELFRSALNERFVE-YLRLTGGGNLSQR 221 (319)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC---CHHHHHHHHHHHHHHHH-HHHHHCCCCHHHH
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc---hhhHHHHHHHHHHHHhh-hhcccCCCchhHH
Confidence 236899999999999999999887 8889999988765321100 0000000 00000000 000000000 00
Q ss_pred --hHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004141 687 --DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 687 --~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
....+...........+++|+|+++|++ ..+++.....+.+.+.. .++++.+++..|.+..++....+...|.+
T Consensus 222 l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~~ 297 (319)
T 3lcr_A 222 ITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVGD 297 (319)
T ss_dssp HHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHHH
Confidence 0111111111112357899999999998 56666667777766654 36788888744444444577788899999
Q ss_pred HHHHh
Q 004141 765 WFKKY 769 (771)
Q Consensus 765 fl~~~ 769 (771)
||.+.
T Consensus 298 fL~~~ 302 (319)
T 3lcr_A 298 WLREA 302 (319)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99864
No 265
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.40 E-value=6.8e-12 Score=136.59 Aligned_cols=206 Identities=12% Similarity=0.025 Sum_probs=134.0
Q ss_pred cccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004141 201 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 201 ~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
...|.++....+.+.....|++||+++++..... ......+..++|+|||+. |++++. ...
T Consensus 174 ~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----l~~~~~--------------~~~ 234 (433)
T 3bws_A 174 TISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPIRDL----VYCSNW--------------ISE 234 (433)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETTTTE----EEEEET--------------TTT
T ss_pred EEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCCCCE----EEEEec--------------CCC
Confidence 3456555333344445689999999988765441 233446778999999997 666542 233
Q ss_pred eeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 281 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.|+++|+ .+++..........+....|+|||+.|+......... ......|+++|+.+++
T Consensus 235 ~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~---~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 235 DISVIDR-----------------KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ---ESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEEET-----------------TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT---CSCCEEEEEEETTTTE
T ss_pred cEEEEEC-----------------CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc---ccCCCeEEEEECCCCc
Confidence 7999998 6666555444555688899999999998877543100 0123579999988765
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEE
Q 004141 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLL 440 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~ 440 (771)
........ ..+..++|+|||+.|+++...++ .++.+|+.+++...............+
T Consensus 295 ~~~~~~~~--------------------~~~~~~~~~~~g~~l~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~~~~~~~ 352 (433)
T 3bws_A 295 LIDTIGPP--------------------GNKRHIVSGNTENKIYVSDMCCS--KIEVYDLKEKKVQKSIPVFDKPNTIAL 352 (433)
T ss_dssp EEEEEEEE--------------------ECEEEEEECSSTTEEEEEETTTT--EEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred EEeeccCC--------------------CCcceEEECCCCCEEEEEecCCC--EEEEEECCCCcEEEEecCCCCCCeEEE
Confidence 32211000 02345689999998888765444 566678888877655544444566789
Q ss_pred eecCCEEEEEEeCCCCC-----------CeEEEEEecc
Q 004141 441 TLDGDNIIAVSSSPVDV-----------PQVKYGYFVD 467 (771)
Q Consensus 441 s~dg~~l~~~~~~~~~p-----------~~l~~~~~~~ 467 (771)
+++++.+++........ ..+++.++.+
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 99999888877654433 3677766543
No 266
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.40 E-value=1e-10 Score=124.90 Aligned_cols=275 Identities=11% Similarity=0.111 Sum_probs=164.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||||++|+..+... .+.+|+ .++....+..... +...++|||||+.|+..+.+...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~h~~---------~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKLHCP---------WVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECCCT---------TCCCCEECTTSSEEEECCSSSCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEecCCC---------CEEEEEECCCCCEEEEeeCCCcE
Confidence 4588899999999998776544 567773 3333333322111 12688999999999987766543
Q ss_pred CCCCccCCCC-------CCCCCCccCCCCCCcccccCCcC-cccCCccCceEEEEEccCCceeeccC----CCCCCccce
Q 004141 177 SKPTFSLGST-------KGGSSDKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAVKG----IPKSLSVGQ 244 (771)
Q Consensus 177 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~~~~~~l~~----~~~~~~~~~ 244 (771)
+ .|+.... +.......+........|.++.+ ..+++..+..|.+||+.+++...... ......+..
T Consensus 133 ~--iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 133 S--IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp E--EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred E--EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 3 2322111 11112233444445566776644 35566677899999999987655411 112335667
Q ss_pred EEEec-CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-CcceecCCCCccccce
Q 004141 245 VVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFP 322 (771)
Q Consensus 245 ~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~p 322 (771)
+.|+| +++. |+..+ .+..|.++|+. .+ .....+..+...+.+.
T Consensus 211 ~~~~~~~~~~----l~sgs---------------~D~~v~~wd~~----------------~~~~~~~~~~~h~~~v~~v 255 (380)
T 3iz6_a 211 LSINSLNANM----FISGS---------------CDTTVRLWDLR----------------ITSRAVRTYHGHEGDINSV 255 (380)
T ss_dssp EEECSSSCCE----EEEEE---------------TTSCEEEEETT----------------TTCCCCEEECCCSSCCCEE
T ss_pred EEeecCCCCE----EEEEE---------------CCCeEEEEECC----------------CCCcceEEECCcCCCeEEE
Confidence 88877 6654 44443 23368888872 12 2345566677789999
Q ss_pred eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004141 323 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 323 ~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~ 402 (771)
.|+|||+.|+..+.+. .|.+||+.++......... ........ ..+..++|+|||+.
T Consensus 256 ~~~p~~~~l~s~s~D~-----------~i~lwd~~~~~~~~~~~~~-------~~~~~~~~-----~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDG-----------TCRLFDMRTGHQLQVYNRE-------PDRNDNEL-----PIVTSVAFSISGRL 312 (380)
T ss_dssp EECTTSSEEEEECSSS-----------CEEEEETTTTEEEEEECCC-------CSSSCCSS-----CSCSEEEECSSSSE
T ss_pred EEecCCCeEEEEcCCC-----------eEEEEECCCCcEEEEeccc-------cccccccc-----CceEEEEECCCCCE
Confidence 9999999988777653 4889998876542211000 00000001 12456789999996
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEE-ec----CCCCCceeeEEeecCCEEEEE
Q 004141 403 MLLSSIWGSSQVIISVNVSSGELLR-IT----PAESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~~~-l~----~~~~~~~~~~~s~dg~~l~~~ 450 (771)
|+ +...++. ++.+|..+++... +. .....+....|+++|+.|+..
T Consensus 313 l~-~g~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 313 LF-AGYSNGD--CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EE-EECTTSC--EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EE-EEECCCC--EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 65 4444444 5555877776543 31 223345667899999976543
No 267
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=1.8e-11 Score=130.02 Aligned_cols=197 Identities=15% Similarity=0.124 Sum_probs=126.3
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
||||+.++..... ..+.+++|++... .....+. .. ..+...+|||||++|+..++.. +..+
T Consensus 142 SpDg~~la~as~~-------~d~~i~iwd~~~~-~~~~~~~-~~-----~~V~~v~fspdg~~l~s~s~~~-----~~~~ 202 (365)
T 4h5i_A 142 SREGTVAAIASSK-------VPAIMRIIDPSDL-TEKFEIE-TR-----GEVKDLHFSTDGKVVAYITGSS-----LEVI 202 (365)
T ss_dssp CTTSSCEEEEESC-------SSCEEEEEETTTT-EEEEEEE-CS-----SCCCEEEECTTSSEEEEECSSC-----EEEE
T ss_pred cCCCCEEEEEECC-------CCCEEEEeECCCC-cEEEEeC-CC-----CceEEEEEccCCceEEecccee-----EEEE
Confidence 6788887765432 3356777776332 1112221 11 4578899999999999876433 5666
Q ss_pred e-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCc
Q 004141 130 W-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 208 (771)
Q Consensus 130 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (771)
| ..+..... ....... ..+..+.|||||+.|+..+.+..
T Consensus 203 ~~~~~~~~~~-~~~~~~~------~~v~~v~fspdg~~l~~~s~d~~--------------------------------- 242 (365)
T 4h5i_A 203 STVTGSCIAR-KTDFDKN------WSLSKINFIADDTVLIAASLKKG--------------------------------- 242 (365)
T ss_dssp ETTTCCEEEE-ECCCCTT------EEEEEEEEEETTEEEEEEEESSS---------------------------------
T ss_pred EeccCcceee-eecCCCC------CCEEEEEEcCCCCEEEEEecCCc---------------------------------
Confidence 6 33332221 1111111 12368999999999988765432
Q ss_pred CcccCCccCceEEEEEccCCceeecc---CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 209 GETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 209 g~~~~~~~~~~l~v~d~~~~~~~~l~---~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
....++.|++..+....+. -......+..++|||||+. |+..+ .+..|.++
T Consensus 243 -------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~----lasgs---------------~D~~V~iw 296 (365)
T 4h5i_A 243 -------KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL----AVLAS---------------NDNSIALV 296 (365)
T ss_dssp -------CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE----EEEEE---------------TTSCEEEE
T ss_pred -------ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc----eEEEc---------------CCCEEEEE
Confidence 2246788888766543220 0233446788999999997 77765 23478889
Q ss_pred ecccccchhhhhhhhcCCCCCCcc-ee-cCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 286 RVSLYKSEASELELKESSSEDLPV-VN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~-~~-lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
|+ .+++. .. +..+...+.+.+|||||++||-.+.+. .|.+||+..+
T Consensus 297 d~-----------------~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----------tvrvw~ip~~ 344 (365)
T 4h5i_A 297 KL-----------------KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN-----------TIHIIKLPLN 344 (365)
T ss_dssp ET-----------------TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS-----------EEEEEECCTT
T ss_pred EC-----------------CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC-----------eEEEEEcCCC
Confidence 98 66654 33 456777899999999999999888764 4778887543
No 268
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.39 E-value=9.7e-12 Score=134.72 Aligned_cols=278 Identities=8% Similarity=-0.006 Sum_probs=159.9
Q ss_pred eEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc
Q 004141 55 QAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ 134 (771)
Q Consensus 55 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~ 134 (771)
.++|+.+..-+......+.++++++.... ..+..... .......|+|||++||.....+ .+.+|+-..
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 128 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRD--GSKMLKRA-----DYTAVDTAKLQMRRFILGTTEG-----DIKVLDSNF 128 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEE--TTTTSCSC-----CEEEEEEECSSSCEEEEEETTS-----CEEEECTTS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccc--eeeEEecC-----CceEEEEEecCCCEEEEEECCC-----CEEEEeCCC
Confidence 46666666666666666788888764332 11111111 2345567999999998876543 455663222
Q ss_pred ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCC
Q 004141 135 LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAG 214 (771)
Q Consensus 135 ~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~ 214 (771)
...+... ....+ .+.+++|+|||+.|+..+.
T Consensus 129 ~~~~~~~-~~h~~------~v~~~~~~~~~~~l~s~s~------------------------------------------ 159 (420)
T 3vl1_A 129 NLQREID-QAHVS------EITKLKFFPSGEALISSSQ------------------------------------------ 159 (420)
T ss_dssp CEEEEET-TSSSS------CEEEEEECTTSSEEEEEET------------------------------------------
T ss_pred cceeeec-ccccC------ccEEEEECCCCCEEEEEeC------------------------------------------
Confidence 1222221 11111 2368999999998887643
Q ss_pred ccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004141 215 KRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 215 ~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
...|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 160 --d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~------- 210 (420)
T 3vl1_A 160 --DMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRN----VLSAS---------------LDGTIRLWEC------- 210 (420)
T ss_dssp --TSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTE----EEEEE---------------TTSCEEEEET-------
T ss_pred --CCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCE----EEEEc---------------CCCcEEEeEC-------
Confidence 257999999877644331 334556889999999997 77655 2235667776
Q ss_pred hhhhhhcCCCCCCcc-eecCC------------------------CCccccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004141 295 SELELKESSSEDLPV-VNLTE------------------------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~-~~lt~------------------------~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
.+++. ..+.. ....+..+.|||||+.|+..+.+.
T Consensus 211 ----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------- 269 (420)
T 3vl1_A 211 ----------GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG----------- 269 (420)
T ss_dssp ----------TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----------
T ss_pred ----------CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----------
Confidence 33322 11211 124466788999999987766553
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEE
Q 004141 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR 427 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~ 427 (771)
.|.+||+.+++.... +.. .+...+..++|+|+++.++++...++. |..+|+.+++ +..
T Consensus 270 ~i~i~d~~~~~~~~~---------~~~---------~~~~~v~~~~~~~~~~~~l~~g~~dg~--i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQ---------LPS---------KFTCSCNSLTVDGNNANYIYAGYENGM--LAQWDLRSPECPVGE 329 (420)
T ss_dssp CEEEEETTTCCEEEE---------ECC---------TTSSCEEEEEECSSCTTEEEEEETTSE--EEEEETTCTTSCSEE
T ss_pred eEEEEECCCCceeEE---------ccc---------ccCCCceeEEEeCCCCCEEEEEeCCCe--EEEEEcCCCcCchhh
Confidence 488999877653111 000 011134577899999855566665555 5555777764 445
Q ss_pred ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 428 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 428 l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+.......-...++++++.|+ +.+ . -..+.+.++..
T Consensus 330 ~~~~~~~~v~~~~~~~~~~l~-s~~-~--d~~v~iw~~~~ 365 (420)
T 3vl1_A 330 FLINEGTPINNVYFAAGALFV-SSG-F--DTSIKLDIISD 365 (420)
T ss_dssp EEESTTSCEEEEEEETTEEEE-EET-T--TEEEEEEEECC
T ss_pred hhccCCCCceEEEeCCCCEEE-Eec-C--CccEEEEeccC
Confidence 544233223344666665443 332 2 23455555543
No 269
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.38 E-value=2.4e-10 Score=122.13 Aligned_cols=274 Identities=9% Similarity=0.024 Sum_probs=157.8
Q ss_pred eeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCccccc
Q 004141 71 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 148 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 148 (771)
.+.+.+|++.... ....+.. ......+...+||| +++.|+..+... .+.+| ..+...+.........
T Consensus 95 dg~i~iwd~~~~~-~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~-- 163 (383)
T 3ei3_B 95 GGDIILWDYDVQN-KTSFIQG---MGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVIQVFAKTDSWD-- 163 (383)
T ss_dssp TSCEEEEETTSTT-CEEEECC---CSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEEEEEECCCCSS--
T ss_pred CCeEEEEeCCCcc-cceeeec---CCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCceEEEeccCCCC--
Confidence 3567777764332 1112211 11225688999999 677777665433 45566 3333333332222111
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004141 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
..+..++|+|||+.|+..+. ...|++||+.+.
T Consensus 164 ----~~v~~~~~~~~~~~l~~~~~--------------------------------------------d~~i~i~d~~~~ 195 (383)
T 3ei3_B 164 ----YWYCCVDVSVSRQMLATGDS--------------------------------------------TGRLLLLGLDGH 195 (383)
T ss_dssp ----CCEEEEEEETTTTEEEEEET--------------------------------------------TSEEEEEETTSC
T ss_pred ----CCeEEEEECCCCCEEEEECC--------------------------------------------CCCEEEEECCCC
Confidence 12368999999998887643 368999999766
Q ss_pred ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc
Q 004141 229 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 308 (771)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 308 (771)
....+ ......+..++|+|+++. +++++. .+..|.++|+... ...+.
T Consensus 196 ~~~~~--~~h~~~v~~~~~~~~~~~----~l~s~~--------------~d~~i~iwd~~~~-------------~~~~~ 242 (383)
T 3ei3_B 196 EIFKE--KLHKAKVTHAEFNPRCDW----LMATSS--------------VDATVKLWDLRNI-------------KDKNS 242 (383)
T ss_dssp EEEEE--ECSSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEEGGGC-------------CSTTC
T ss_pred EEEEe--ccCCCcEEEEEECCCCCC----EEEEEe--------------CCCEEEEEeCCCC-------------Ccccc
Confidence 66666 344557889999999996 655552 3347888887210 00133
Q ss_pred ceecCCCCccccceeecC-CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc
Q 004141 309 VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 387 (771)
Q Consensus 309 ~~~lt~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~ 387 (771)
......+...+.++.|+| ||+.|+..+.+ ..|.+||+.+++.......... ..+. +
T Consensus 243 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~----------~~~~--~ 299 (383)
T 3ei3_B 243 YIAEMPHEKPVNAAYFNPTDSTKLLTTDQR-----------NEIRVYSSYDWSKPDQIIIHPH----------RQFQ--H 299 (383)
T ss_dssp EEEEEECSSCEEEEEECTTTSCEEEEEESS-----------SEEEEEETTBTTSCSEEEECCB----------CCCT--T
T ss_pred eEEEecCCCceEEEEEcCCCCCEEEEEcCC-----------CcEEEEECCCCccccccccccc----------cccc--c
Confidence 333335667789999999 99999877654 3589999887665322111100 0000 0
Q ss_pred cCCCCCCccccCCCEEEEEeee------CCeeEEEEEECCCCcEEEecCC---CCCceeeEEeecCCEEEEEEeCCCCCC
Q 004141 388 SSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVP 458 (771)
Q Consensus 388 ~~~~~~~~~s~Dg~~l~~~~~~------~~~~~l~~~d~~tg~~~~l~~~---~~~~~~~~~s~dg~~l~~~~~~~~~p~ 458 (771)
. ..-...|+|++..+.+.... .....|..+|+.+++....... ........|+++++.|+.. + + .
T Consensus 300 ~-~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d--~ 373 (383)
T 3ei3_B 300 L-TPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M--G--F 373 (383)
T ss_dssp S-CCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E--T--T
T ss_pred c-cceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c--C--C
Confidence 0 11124566666654433321 1234466678888876544332 2334445899999977655 3 2 4
Q ss_pred eEEEEEe
Q 004141 459 QVKYGYF 465 (771)
Q Consensus 459 ~l~~~~~ 465 (771)
.|.+.++
T Consensus 374 ~i~iw~~ 380 (383)
T 3ei3_B 374 NILIWNR 380 (383)
T ss_dssp EEEEEEC
T ss_pred cEEEEec
Confidence 5666554
No 270
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.38 E-value=2.1e-11 Score=128.94 Aligned_cols=269 Identities=13% Similarity=0.085 Sum_probs=164.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++||..+... ...+|+ .+........... +.....|||||+.|+..+.+...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~~---------~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPCT---------WVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECSSS---------CCCEEEECTTSSEEEEESTTSEE
T ss_pred CeEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecCCC---------CEEEEEECCCCCEEEEeeCCCCE
Confidence 4588899999999998776544 667773 3333333332211 23689999999999887655432
Q ss_pred CCCCccCCCCCC------CCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecC
Q 004141 177 SKPTFSLGSTKG------GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 250 (771)
Q Consensus 177 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspD 250 (771)
. .|....... ......+........|.++....+++.....|.+||+.+++..... ......+..+.|+|+
T Consensus 131 ~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 S--VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPS 207 (354)
T ss_dssp E--EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCC
T ss_pred E--EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeC
Confidence 1 121111100 0011123333345567777666777778899999999988765431 223345667788774
Q ss_pred --CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC
Q 004141 251 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 327 (771)
Q Consensus 251 --g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD 327 (771)
|+. |+..+ .+..|.++|+ .+++ ...+..+...+...+|+||
T Consensus 208 ~~g~~----l~sgs---------------~Dg~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 208 ETGNT----FVSGG---------------CDKKAMVWDM-----------------RSGQCVQAFETHESDVNSVRYYPS 251 (354)
T ss_dssp SSCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEeCC
Confidence 554 55444 3347888898 5554 3455666777899999999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
|+.|+..+.+. .|.+||+.++..... .... ... .....++|+|||+.| ++.
T Consensus 252 ~~~l~s~s~D~-----------~v~lwd~~~~~~~~~----------~~~~-~~~------~~~~~~~~s~~g~~l-~~g 302 (354)
T 2pbi_B 252 GDAFASGSDDA-----------TCRLYDLRADREVAI----------YSKE-SII------FGASSVDFSLSGRLL-FAG 302 (354)
T ss_dssp SSEEEEEETTS-----------CEEEEETTTTEEEEE----------ECCT-TCC------SCEEEEEECTTSSEE-EEE
T ss_pred CCEEEEEeCCC-----------eEEEEECCCCcEEEE----------EcCC-Ccc------cceeEEEEeCCCCEE-EEE
Confidence 99988777553 488888876532111 0000 000 023457899999855 444
Q ss_pred eeCCeeEEEEEECCCCcEE-EecCCCCCceeeEEeecCCEEEEEE
Q 004141 408 IWGSSQVIISVNVSSGELL-RITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~-~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
..++...+| |+.+++.. .+......+....|+|||+.|+...
T Consensus 303 ~~d~~i~vw--d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 303 YNDYTINVW--DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp ETTSCEEEE--ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ECCCcEEEE--ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 555555555 77677644 4444444566678999998776544
No 271
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.37 E-value=6.7e-12 Score=128.60 Aligned_cols=215 Identities=16% Similarity=0.106 Sum_probs=131.4
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECC--------CCCCCCChhhhhcC--
Q 004141 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSL-- 588 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~--------rG~~~~g~~~~~~~-- 588 (771)
..+.+.+|.|. +.++.|+||.+||+.. ...+||+++.+++ +|+.++|. +....
T Consensus 123 ~sf~~~i~lP~---g~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 123 ISFSASIRKPS---GAGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEEECCS---SSCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEEECCC---CCCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 45789999997 4578999999997421 0357999999997 34445655 33211
Q ss_pred CCCccccc--hhhHHHHHHHHHH----cCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCccchhhhh-----
Q 004141 589 PGKVGSQD--VNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----- 657 (771)
Q Consensus 589 ~~~~~~~~--~~D~~~~i~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~----- 657 (771)
...++... ..++.+++++|.. ++.+|++||+++|||+||..++++++.. ++|+++|..++..+-....
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~~~R~~~~ 264 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAACWRISDQ 264 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTSCHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchhhhhhchh
Confidence 12343322 3588999999998 7889999999999999999999999985 5899999888754322110
Q ss_pred ----cCCC--------CCcchhhhhccCCCCccCCCCCChhhHHHHhhcCcccc---cCCC-CCcEEEEeeCCCCccCcH
Q 004141 658 ----GTTD--------IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---ISKV-KTPTIFLLGAQDLRVPVS 721 (771)
Q Consensus 658 ----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---~~~i-~~P~lii~G~~D~~vp~~ 721 (771)
+..- ...|+. .. ...|... ...-|+++ +.-+ ..|+|++.| +|..+++.
T Consensus 265 ~~~~Ge~v~~~~~~~ge~~Wf~-~~-----f~~y~~~---------~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~ 328 (433)
T 4g4g_A 265 QKAAGANIQTAAQIITENPWFS-RN-----FDPHVNS---------ITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPV 328 (433)
T ss_dssp HHHTTCCCCCHHHHTTTCCCSC-TT-----TGGGTTC---------GGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHH
T ss_pred hcccCcchhhhhcccCCccccc-hh-----hHhhccc---------cccCCcCHHHHHHhhCCceEEEecC-CCCcCCcH
Confidence 1000 001110 00 0000000 00011111 1111 258999999 99888877
Q ss_pred HHHHHHHHHH----hCCC--CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 722 NGLQYARALR----EKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 722 ~~~~~~~~l~----~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
.....+..++ ..|. ++.+...++.+|+.. +. .....+.+||+++|+
T Consensus 329 g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~f-p~---~~r~~~~~F~~k~Lk 380 (433)
T 4g4g_A 329 STTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQF-PS---SQNQDLNSYINYFLL 380 (433)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCC-CG---GGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccC-CH---HHHHHHHHHHHHHhC
Confidence 5554433332 2243 467766555556432 22 235788899999985
No 272
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.37 E-value=2.2e-11 Score=130.87 Aligned_cols=277 Identities=15% Similarity=0.070 Sum_probs=152.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCccc---------ccccCCCcccceeecCCCCeEEE
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVH---------GSVYADGWFEGISWNSDETLIAY 169 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~wSpDg~~la~ 169 (771)
..+...+|||||++||...+ +..++|.+ ..+.....+....... ...-.+..+.+++|||||+.|+.
T Consensus 65 ~~V~~v~fspdg~~la~g~~---~~v~i~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCN---KTTQVYRV-SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp SCCCEEEECTTSSEEEEECB---SCEEEEET-TTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CEEEEEEECCCCCEEEEEcC---CcEEEEEe-cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 34778999999999987643 22222222 2333322221110000 00001112468999999999998
Q ss_pred EecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec
Q 004141 170 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 249 (771)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp 249 (771)
.+.+...+ .|+............+......+.|.++....+++..+..|.+||+.+++.... ......+..++|+|
T Consensus 141 ~~~d~~i~--iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAEDRLIR--IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAVSP 216 (393)
T ss_dssp EETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEECS
T ss_pred EcCCCeEE--EEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE--EEcCCCcEEEEEEC
Confidence 87765433 333322211112223334445667888876677777789999999999876554 33444677889999
Q ss_pred -CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eec-------CCCCcccc
Q 004141 250 -LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-------TESISSAF 320 (771)
Q Consensus 250 -Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~l-------t~~~~~~~ 320 (771)
||+. |+..+ .+..|.++|+ .++.. ..+ ..+...+.
T Consensus 217 ~~~~~----l~~~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 217 GDGKY----IAAGS---------------LDRAVRVWDS-----------------ETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp TTCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEEC------CCCSSCEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEeecccccCCCCCCCCEE
Confidence 7776 66554 2336777787 44432 233 34455688
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce--eeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
+..|+|||+.|+..+.+. .|.+||+.+.......... ......+ .+ +...+..++|++
T Consensus 261 ~v~~~~~g~~l~s~s~d~-----------~v~~wd~~~~~~~~~~~~~~~~~~~~~~--------~~-h~~~v~~~~~~~ 320 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDR-----------SVKLWNLQNANNKSDSKTPNSGTCEVTY--------IG-HKDFVLSVATTQ 320 (393)
T ss_dssp EEEECTTSSEEEEEETTS-----------EEEEEEC---------------CEEEEE--------EC-CSSCEEEEEECG
T ss_pred EEEECCCCCEEEEEeCCC-----------EEEEEECCCCCCcccccCCCCCcceEEE--------ec-ccCcEEEEEECC
Confidence 999999999988766553 4888888664431110000 0000000 00 111244678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeeEEee
Q 004141 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTL 442 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~ 442 (771)
|++.|+ +...++. +..+|+.+++...... ....+....+++
T Consensus 321 ~~~~l~-sgs~D~~--v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 321 NDEYIL-SGSKDRG--VLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp GGCEEE-EEETTSE--EEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred CCCEEE-EEeCCCe--EEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 998664 5444554 5555888887654433 333333344443
No 273
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.37 E-value=2.1e-12 Score=138.02 Aligned_cols=120 Identities=14% Similarity=0.105 Sum_probs=86.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH------CCcEEEEECCCCCCCCChhhhhcCCC
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~Vv~~d~rG~~~~g~~~~~~~~~ 590 (771)
+|..++...+.+. ....+.||++||++++ ...|...+..|++ .||.|+++|+|| +|.+....
T Consensus 93 ~g~~i~~~~~~~~----~~~~~pllllHG~~~s--~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG---~G~S~~~~--- 160 (408)
T 3g02_A 93 EGLTIHFAALFSE----REDAVPIALLHGWPGS--FVEFYPILQLFREEYTPETLPFHLVVPSLPG---YTFSSGPP--- 160 (408)
T ss_dssp TTEEEEEEEECCS----CTTCEEEEEECCSSCC--GGGGHHHHHHHHHHCCTTTCCEEEEEECCTT---STTSCCSC---
T ss_pred CCEEEEEEEecCC----CCCCCeEEEECCCCCc--HHHHHHHHHHHhcccccccCceEEEEECCCC---CCCCCCCC---
Confidence 6888988777653 2345779999998776 4468888888877 699999999999 55443211
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCC-eEEEEEcChhHHHHHHHHhhCCCceeEEEecCCc
Q 004141 591 KVGSQDVNDVLTAIDHVIDMGLANPS-KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~-ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~ 650 (771)
.......+++.+.+..+++.- ..+ +++++||||||.+++.++.++|+++...+..+++
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 011234667777666666652 344 8999999999999999999998766666655443
No 274
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.36 E-value=1.9e-12 Score=129.64 Aligned_cols=210 Identities=15% Similarity=0.073 Sum_probs=124.5
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcE---EE----------EECCCCCCCCChhhhhc---CCCCccccchhhHH
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---LL----------IVNYRGSLGFGEEALQS---LPGKVGSQDVNDVL 601 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~---Vv----------~~d~rG~~~~g~~~~~~---~~~~~~~~~~~D~~ 601 (771)
+.||++||.+.+ ...|...+..|+++++. |+ .+|-++....+...... ..........+++.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 458899997665 45688899999888763 33 33322111000000000 00001112245666
Q ss_pred HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCC-----ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004141 602 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 602 ~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
++++.+.++. +.+++.++||||||.+++.++.++|+ +++++|+.++..+......... .+.
T Consensus 82 ~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~--------~~~---- 147 (254)
T 3ds8_A 82 IAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGM--------DLS---- 147 (254)
T ss_dssp HHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCS--------CTT----
T ss_pred HHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccc--------ccc----
Confidence 6667777663 34789999999999999999999988 8999999888654322110000 000
Q ss_pred ccCCCCCC-hhhHHHHhhcCcccccCCCCCcEEEEeeC------CCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--CCc
Q 004141 677 DSFTESPS-VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--DVH 747 (771)
Q Consensus 677 ~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~P~lii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~~H 747 (771)
+...+. ......+... ...+.+ ++|+|.|+|+ .|..||+..++.+...+.......+...+.+ ++|
T Consensus 148 --~~~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~H 222 (254)
T 3ds8_A 148 --FKKLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVH 222 (254)
T ss_dssp --CSSCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCG
T ss_pred --cccCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCch
Confidence 001111 1111111111 111222 6899999999 9999999998888777765433455556655 679
Q ss_pred cCCCCCChHHHHHHHHHHHHHhh
Q 004141 748 GIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~fl~~~L 770 (771)
..... +. ++.+.+..||+++.
T Consensus 223 s~l~~-~~-~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 223 QTLHE-TP-KSIEKTYWFLEKFK 243 (254)
T ss_dssp GGGGG-SH-HHHHHHHHHHHTCC
T ss_pred hcccC-CH-HHHHHHHHHHHHhc
Confidence 76533 33 68899999998764
No 275
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.36 E-value=3.7e-12 Score=129.47 Aligned_cols=227 Identities=11% Similarity=0.071 Sum_probs=133.6
Q ss_pred CCceEEEEEEecCCCC-----CCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCC--C---C----
Q 004141 517 AQKPFEAIFVSSSHKK-----DCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGS--L---G---- 579 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~-----~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vv~~d~rG~--~---~---- 579 (771)
-|.++...+|.|+++. ..+++|+|+++||.+.+ ...|.. ..+.+.+.+..+++++..-. . +
T Consensus 24 l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 3677888999998763 35789999999996554 223332 23455678999999984311 0 0
Q ss_pred --CCh--hhh-hcC------CCCccccchhhHHHHHHHHHHcCC-------CCCCeEEEEEcChhHHHHHHHHhhC--CC
Q 004141 580 --FGE--EAL-QSL------PGKVGSQDVNDVLTAIDHVIDMGL-------ANPSKVTVVGGSHGGFLTTHLIGQA--PD 639 (771)
Q Consensus 580 --~g~--~~~-~~~------~~~~~~~~~~D~~~~i~~l~~~~~-------~d~~ri~l~G~S~GG~~a~~~a~~~--p~ 639 (771)
.|. .+. +.. ...+...-.+++.. ++.++.. .+.++.+|.|+||||+.|+.++.++ |+
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~---~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~ 178 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQ---TLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGK 178 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHH---HHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGT
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHH---HHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCC
Confidence 000 000 000 00000111233333 3333322 2456899999999999999999985 67
Q ss_pred ceeEEEecCCccchhhhhcCCCCCcchh---hhhccCCCCccCCCCCChhhHHHHhhcCccccc---CCC-CCcEEEEee
Q 004141 640 KFVAAAARNPLCNLALMVGTTDIPDWCY---VESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKV-KTPTIFLLG 712 (771)
Q Consensus 640 ~~~~~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i-~~P~lii~G 712 (771)
.++++.+.+|.++.... .|.. ...++. +...+...++...+ .+. ..+++|-+|
T Consensus 179 ~~~~~~s~s~~~~p~~~-------~~~~~~~~~~~g~-------------~~~~~~~~d~~~l~~~~~~~~~~~i~id~G 238 (299)
T 4fol_A 179 RYKSCSAFAPIVNPSNV-------PWGQKAFKGYLGE-------------EKAQWEAYDPCLLIKNIRHVGDDRILIHVG 238 (299)
T ss_dssp CCSEEEEESCCCCGGGS-------HHHHHHHHHHTC------------------CGGGCHHHHGGGSCCCTTCCEEEEEE
T ss_pred ceEEEEecccccCcccc-------ccccccccccccc-------------chhhhhhcCHHHHHHhcccCCCCceEEEec
Confidence 88999999988764321 1110 011111 11122233333222 222 357999999
Q ss_pred CCCCccCcH-HHHHHHHHHHhCCCC--EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHhhC
Q 004141 713 AQDLRVPVS-NGLQYARALREKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 713 ~~D~~vp~~-~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~L~ 771 (771)
+.|.+.... ..+.|.++++++|.+ +++...||.+|.+.. ...++++-+.|..++|+
T Consensus 239 ~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 239 DSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp TTCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred CCCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 999886321 235788889888876 788899998997531 23456777889888875
No 276
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=2.8e-11 Score=127.32 Aligned_cols=262 Identities=8% Similarity=0.035 Sum_probs=146.0
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 103 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.++++++++.++.... ...++.++ ..++..+.+.... .. ..+.|||||+++++...
T Consensus 4 g~~~~~~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNN------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEET-------
T ss_pred cccccCCCEEEEEeCC----CCeEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeC-------
Confidence 3567887776554433 23566666 5555555555443 23 48899999997776532
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-----CCccceEEEecCCCCC
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGL 254 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-----~~~~~~~~wspDg~~~ 254 (771)
....|++||+.+++......... ...+..++|||||+.
T Consensus 63 ------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~- 105 (349)
T 1jmx_B 63 ------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE- 105 (349)
T ss_dssp ------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE-
T ss_pred ------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE-
Confidence 23689999999887654311121 123678899999997
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee---cCCCCccccceeecCCCCEE
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN---LTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---lt~~~~~~~~p~~SpDG~~l 331 (771)
|++........+. .+ ......|+++|+ .+++... .......+....|||||+ |
T Consensus 106 ---l~~~~~~~~~~~~--~~-~~~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 106 ---VYATVNPTQRLND--HY-VVKPPRLEVFST-----------------ADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp ---EEEEEEEEEECSS--CE-EECCCEEEEEEG-----------------GGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred ---EEEEccccccccc--cc-ccCCCeEEEEEC-----------------CCccccceeeeccCCCcccceeECCCCc-E
Confidence 7776632100000 00 011348999998 4433221 112223456677999999 5
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCcc-cee------------------------eEEecccccC-------
Q 004141 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE-KIV------------------------DVIPVVQCAE------- 379 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~------------------------~~~~~~~~~~------- 379 (771)
++.+ ..|+++|+.+++...... ... ....+...+.
T Consensus 162 ~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 162 YVAG-------------PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp EEES-------------SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred EEcc-------------CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 5421 128888887765422110 000 0000000000
Q ss_pred -------------CCCCcc----cccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEe
Q 004141 380 -------------GDCFPG----LYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLT 441 (771)
Q Consensus 380 -------------~~~f~g----~~~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s 441 (771)
.+...- -........+|+| ||+.|++. ...|+.+|+.+++...............|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s 303 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFD 303 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEEC
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEEC
Confidence 000000 0000123557889 99987766 347899999999876554333334567899
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 442 LDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 442 ~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
+||+.|++. +. -..|.+.+..+.
T Consensus 304 ~dg~~l~~~--~~--~~~v~v~d~~~~ 326 (349)
T 1jmx_B 304 KKGDKLYLG--GT--FNDLAVFNPDTL 326 (349)
T ss_dssp SSSSCEEEE--SB--SSEEEEEETTTT
T ss_pred CCCCEEEEe--cC--CCeEEEEecccc
Confidence 999988873 22 267888876543
No 277
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.35 E-value=4.4e-11 Score=125.92 Aligned_cols=299 Identities=10% Similarity=0.018 Sum_probs=161.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.+|||+.|+... ..+.+.+|++............. .....+...+|||||++||..+... ...
T Consensus 24 ~sp~g~~las~~---------~D~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~ 86 (345)
T 3fm0_A 24 WNPAGTLLASCG---------GDRRIRIWGTEGDSWICKSVLSE---GHQRTVRKVAWSPCGNYLASASFDA-----TTC 86 (345)
T ss_dssp ECTTSSCEEEEE---------TTSCEEEEEEETTEEEEEEEECS---SCSSCEEEEEECTTSSEEEEEETTS-----CEE
T ss_pred ECCCCCEEEEEc---------CCCeEEEEEcCCCcceeeeeecc---ccCCcEEEEEECCCCCEEEEEECCC-----cEE
Confidence 467888777543 23456666664331100111111 1224588899999999998876543 344
Q ss_pred Ee--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC---CCCccCCCCCCccc
Q 004141 129 LW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGD 203 (771)
Q Consensus 129 ~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 203 (771)
+| ..+....+..+. +..+. +..++|+|||+.|+..+.+...+ .|+....... .....+......+.
T Consensus 87 iw~~~~~~~~~~~~~~-~h~~~------v~~v~~sp~~~~l~s~s~D~~v~--iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLE-GHENE------VKSVAWAPSGNLLATCSRDKSVW--VWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEEECCC-EEEEEEEC-CCSSC------EEEEEECTTSSEEEEEETTSCEE--EEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred EEEccCCCeEEEEEcc-CCCCC------ceEEEEeCCCCEEEEEECCCeEE--EEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 55 222222222221 11112 26899999999999988766433 3332211110 11112333334567
Q ss_pred ccCCcCcccCCccCceEEEEEccCCcee---eccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004141 204 WEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~~---~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
|.++....+++..+..|.+||..+++.. .+ ......+..++|+|||+. |+..+. +.
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~--~~h~~~v~~l~~sp~g~~----l~s~s~---------------D~ 216 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATL--EGHESTVWSLAFDPSGQR----LASCSD---------------DR 216 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECTTSSE----EEEEET---------------TS
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe--cCCCCceEEEEECCCCCE----EEEEeC---------------CC
Confidence 8888666666677789999999887643 33 334456889999999997 776652 12
Q ss_pred eeEEEec--ccccchhhhhhhhcCCCCCCc-ceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004141 281 ALYAVRV--SLYKSEASELELKESSSEDLP-VVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 281 ~l~~~d~--~~~~~~~~~~~~~~~~~~~~~-~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
.|.++++ +... ..... ........ ...+.. +...+...+|+|+|..|+..+.+. .|.++++
T Consensus 217 ~v~iW~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----------~i~vw~~ 281 (345)
T 3fm0_A 217 TVRIWRQYLPGNE---QGVAC-SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD-----------AIRVFQE 281 (345)
T ss_dssp CEEEEEEECTTCT---TCCCC-C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS-----------CEEEEEE
T ss_pred eEEEeccccCCCC---cccee-eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC-----------eEEEEEe
Confidence 3444443 1000 00000 00000000 112222 345678899999999998877653 3666776
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004141 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 419 (771)
.++......... ....... .+...+..++|+|++..++++.+.++...||.+.
T Consensus 282 ~~~~~~~~~~~~-~~~~~~~---------~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 282 DPNSDPQQPTFS-LTAHLHQ---------AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CTTSCTTSCCEE-EEEEETT---------SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred CCCCCcceeeEE-EEeeecc---------cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 554321110000 0000000 0112356788999987677888888888888654
No 278
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.9e-11 Score=131.06 Aligned_cols=259 Identities=9% Similarity=0.012 Sum_probs=151.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+...+|||||++||-.+.+. ... + ++..+.+. +..+. ...++||||| ..+
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~-----TV~-d--~~~~~~l~---gh~~~------v~~V~FsPdg-------~~~---- 67 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDI-----SIG-Q--PKYAKDIN---CNSKN------LFHVKEFPLE-------FEN---- 67 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSE-----EEE-E--ECCCSCCS---SBGGG------TEEEEEECCC-------CCC----
T ss_pred ccEEEEEECCCCCEEEEEcCCc-----eee-c--ccccceec---CCCcc------EEEEEECCCC-------Ccc----
Confidence 4578899999999998754432 222 2 11111111 11112 2588999999 111
Q ss_pred CCccCCCCCCCCCCc-cCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC-----ccceEEEecCCC
Q 004141 179 PTFSLGSTKGGSSDK-DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-----SVGQVVWAPLNE 252 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-----~~~~~~wspDg~ 252 (771)
.|............ .+..+.....|+||.....+......+.+||.++ ....+ . .+. .+..++|||||+
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l--~-~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 68 -KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNL--D-SKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp -TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEEC--C-CSSCSTTTCEEEEEECSSSS
T ss_pred -eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeec--c-CCCccccccEEEEEEcCCCC
Confidence 12111111111111 2245556778999977777777888999999655 33333 2 222 477999999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--------eec----CCCCcccc
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--------VNL----TESISSAF 320 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~l----t~~~~~~~ 320 (771)
. |+..+ .++.|.++|+ .++.. ..+ ..+...+.
T Consensus 143 ~----LAsgs---------------~DGtVkIWd~-----------------~~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 143 S----IVVGN---------------EDGELQFFSI-----------------RKNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp C----EEEEE---------------TTSEEEEEEC-----------------CCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred E----EEEEc---------------CCCEEEEEEC-----------------CCCccccccceeeeeeecccccccccEE
Confidence 8 88876 3447778887 44432 333 33445689
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004141 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg 400 (771)
+.+||||| |+..+.+ ..+++||+.++....+... +. ..+...+..++|+ |
T Consensus 187 sVawSPdg--Laass~D-----------~tVrlWd~~~~~~~~~~~t-------L~--------~~h~~~V~svaFs--g 236 (588)
T 2j04_A 187 HIVWYEDV--LVAALSN-----------NSVFSMTVSASSHQPVSRM-------IQ--------NASRRKITDLKIV--D 236 (588)
T ss_dssp EEEEETTE--EEEEETT-----------CCEEEECCCSSSSCCCEEE-------EE--------CCCSSCCCCEEEE--T
T ss_pred EEEEcCCc--EEEEeCC-----------CeEEEEECCCCccccceee-------ec--------ccccCcEEEEEEE--C
Confidence 99999999 5555544 3488888877663210000 00 0011246788899 4
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEec-CCCCCceeeEE--eecCCEEEEEEeCCCCCCeEEEE
Q 004141 401 CTMLLSSIWGSSQVIISVNVSSGELLRIT-PAESNFSWSLL--TLDGDNIIAVSSSPVDVPQVKYG 463 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~--s~dg~~l~~~~~~~~~p~~l~~~ 463 (771)
+.|+.+ . . ..+..+++.+++...+. .....+....| ++|+..++.+..+.. .++..
T Consensus 237 ~~LASa-~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~---klw~~ 295 (588)
T 2j04_A 237 YKVVLT-C-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY---KVLLE 295 (588)
T ss_dssp TEEEEE-C-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE---EEEES
T ss_pred CEEEEE-e-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC---EEEee
Confidence 655443 3 3 35666688888885554 44445666788 888865554443322 56654
No 279
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.35 E-value=1.8e-12 Score=133.58 Aligned_cols=210 Identities=11% Similarity=0.085 Sum_probs=123.9
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHH-HHHHcC
Q 004141 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMG 611 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~ 611 (771)
..+..|.||++||.+.......|......|. .+|.|+.+|+|| +|.+.. ....++++.+.+. .+.+.
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~-------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPG---YEEGEP-------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTT---SSTTCC-------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-
Confidence 3455689999999776532256777777764 569999999999 544311 1123455554443 44443
Q ss_pred CCCCCeEEEEEcChhHHHHHHHHhhCC---CceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCccCCCCCC--
Q 004141 612 LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPS-- 684 (771)
Q Consensus 612 ~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-- 684 (771)
.+.+++.|+||||||.+++.++.++| ++++++|+.++........ ...+. ....+..... .....
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~ 202 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA----MNAWLEELTATLFDRET---VRMDDTR 202 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH----HHHHHHHHHGGGCCCCS---SCCCHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH----HHHHHHHHHHHHHhCcC---CccchHH
Confidence 34568999999999999999999987 4899999988764321100 00000 0000000000 00000
Q ss_pred hhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC-CCCEEEEEeCCCCccCCCCCChHHHHHHHH
Q 004141 685 VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNIG 763 (771)
Q Consensus 685 ~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 763 (771)
......+..........++++|+|+++|+ |..+++.. .. +... ..+++++++++ +|.....+....+...+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~ 275 (300)
T 1kez_A 203 LTALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHID 275 (300)
T ss_dssp HHHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHHH
Confidence 00111111111111346789999999995 66666554 22 2221 22478999999 998764355568888999
Q ss_pred HHHHHh
Q 004141 764 LWFKKY 769 (771)
Q Consensus 764 ~fl~~~ 769 (771)
+||++.
T Consensus 276 ~fl~~~ 281 (300)
T 1kez_A 276 AWLGGG 281 (300)
T ss_dssp HHHTCC
T ss_pred HHHHhc
Confidence 998754
No 280
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.34 E-value=2.3e-10 Score=118.90 Aligned_cols=222 Identities=12% Similarity=0.154 Sum_probs=139.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+...+|||||++|+..+... ...+|+ .++..+.... ... +..+.|+|+++.|+..+.+
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~s~D-- 128 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDK-----TLRLWDVATGETYQRFVGHKSD----------VMSVDIDKKASMIISGSRD-- 128 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC----------EEEEEECTTSCEEEEEETT--
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCeeEEEccCCCc----------EEEEEEcCCCCEEEEEeCC--
Confidence 5578899999999998776544 566773 3333222221 122 2689999999988876543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC---
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE--- 252 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~--- 252 (771)
..|.+||+.+.....+ ......+..+.|+|+++
T Consensus 129 ------------------------------------------~~i~vwd~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 129 ------------------------------------------KTIKVWTIKGQCLATL--LGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp ------------------------------------------SCEEEEETTSCEEEEE--CCCSSCEEEEEECCC-----
T ss_pred ------------------------------------------CeEEEEECCCCeEEEE--eccCCcEEEEEEccCCCCCC
Confidence 5788999987777777 44555677889998543
Q ss_pred ---CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCC
Q 004141 253 ---GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDG 328 (771)
Q Consensus 253 ---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG 328 (771)
. |+..+ .+..|.++|+ ...+ ...+..+...+....|||||
T Consensus 165 ~~~~----l~s~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 165 DSVT----IISAG---------------NDKMVKAWNL-----------------NQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp -CCE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCCSCEEEEEECTTS
T ss_pred CccE----EEEEe---------------CCCEEEEEEC-----------------CcchhheeecCCCCcEEEEEEcCCC
Confidence 3 44333 3346888887 4443 34566677778999999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~ 408 (771)
+.|+..+.+. .|.+||+.+++........ ..+..++|+||+..|+...
T Consensus 209 ~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~sp~~~~la~~~- 256 (319)
T 3frx_A 209 TLIASAGKDG-----------EIMLWNLAAKKAMYTLSAQ--------------------DEVFSLAFSPNRYWLAAAT- 256 (319)
T ss_dssp SEEEEEETTC-----------EEEEEETTTTEEEEEEECC--------------------SCEEEEEECSSSSEEEEEE-
T ss_pred CEEEEEeCCC-----------eEEEEECCCCcEEEEecCC--------------------CcEEEEEEcCCCCEEEEEc-
Confidence 9988776553 5889998775432110000 1245678999998765443
Q ss_pred eCCeeEEEEEECCCCcEEE-ecCCC--------CCceeeEEeecCCEEEEEEe
Q 004141 409 WGSSQVIISVNVSSGELLR-ITPAE--------SNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 409 ~~~~~~l~~~d~~tg~~~~-l~~~~--------~~~~~~~~s~dg~~l~~~~~ 452 (771)
.....+| +++++.... +.... .......|+|||+.|+....
T Consensus 257 -~~~i~v~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 257 -ATGIKVF--SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp -TTEEEEE--EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred -CCCcEEE--EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 3344555 444444332 22111 12234688999998876543
No 281
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.34 E-value=1.8e-12 Score=132.46 Aligned_cols=149 Identities=14% Similarity=0.109 Sum_probs=99.2
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHhhCCCcee-EEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCChhhHH
Q 004141 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFV-AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 689 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~-~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (771)
..+|++||+|+|+|+||++++.++..+|++|+ ++++.++..... ..+.. ....+.. .+...+..+...
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~----~~~~~---~~~~~~~----~~~~~~~~~~~~ 74 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDC----ARNQY---YTSCMYN----GYPSITTPTANM 74 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTT----TSSSC---GGGGSTT----CCCCCHHHHHHH
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccc----cchHH---HHHHhhc----cCCCCCCHHHHH
Confidence 45889999999999999999999999999998 877666532110 00000 0000000 000001112222
Q ss_pred HHhhcCcccccCCCC-CcEEEEeeCCCCccCcHHHHHHHHHHHhCCC--CEEEEEeCCCCccCCCCCC------------
Q 004141 690 RFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGV--ETKVIVFPNDVHGIERPQS------------ 754 (771)
Q Consensus 690 ~~~~~sp~~~~~~i~-~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~--~~~~~~~~~~~H~~~~~~~------------ 754 (771)
.....+++..+.+++ +|+||+||+.|.+||++++++++++|++.+. +++++.+++++|.+.....
T Consensus 75 ~~~~~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~ 154 (318)
T 2d81_A 75 KSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTS 154 (318)
T ss_dssp HHHBTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCT
T ss_pred HHhhcccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCC
Confidence 222224555555554 6999999999999999999999999998874 7999999999998643221
Q ss_pred ------hHHHHHHHHHHHHHhh
Q 004141 755 ------DFESFLNIGLWFKKYC 770 (771)
Q Consensus 755 ------~~~~~~~i~~fl~~~L 770 (771)
..+...+|++||...|
T Consensus 155 pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 155 PYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp TCEEECSSCHHHHHHHHHHSSC
T ss_pred CcccCCCChHHHHHHHHHhccC
Confidence 2466778999986443
No 282
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.34 E-value=3.6e-11 Score=149.41 Aligned_cols=235 Identities=12% Similarity=0.044 Sum_probs=154.7
Q ss_pred cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec
Q 004141 154 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 233 (771)
Q Consensus 154 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l 233 (771)
...+++|||||+.|+.....+... .|+............+........|+++....+++.....|.+||+.+++...+
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~--i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIK--IIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCE--EEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEE--EEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 346889999999999987665432 233222222222223444556677888876677777788999999999988776
Q ss_pred cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceec
Q 004141 234 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 312 (771)
Q Consensus 234 ~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~l 312 (771)
......+..+.|+||++ ++..+ .+..|.++|+ .+++ ...+
T Consensus 1041 --~~~~~~v~~~~~~~~~~-----l~~~~---------------~dg~v~vwd~-----------------~~~~~~~~~ 1081 (1249)
T 3sfz_A 1041 --QAHQETVKDFRLLQDSR-----LLSWS---------------FDGTVKVWNV-----------------ITGRIERDF 1081 (1249)
T ss_dssp --BCCSSCEEEEEECSSSE-----EEEEE---------------SSSEEEEEET-----------------TTTCCCEEE
T ss_pred --ecCCCcEEEEEEcCCCc-----EEEEE---------------CCCcEEEEEC-----------------CCCceeEEE
Confidence 45556788899999876 55444 2337888998 4444 4566
Q ss_pred CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCC
Q 004141 313 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 392 (771)
Q Consensus 313 t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 392 (771)
..+...+...+|||||+.|+..+.+. .|.+||+.++.......+. ...+.
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~-----------~v~iwd~~~~~~~~~l~~h-------------------~~~v~ 1131 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADK-----------TAKIWSFDLLSPLHELKGH-------------------NGCVR 1131 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSS-----------CCCEECSSSSSCSBCCCCC-------------------SSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCcceeeeeccC-------------------CCcEE
Confidence 66777889999999999998777653 4888888776643221111 11245
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec----------CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEE
Q 004141 393 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT----------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 462 (771)
Q Consensus 393 ~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~----------~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~ 462 (771)
.++|||||+.|+ +...++...+| |+.+++..... .....+....|++||+.++... ..+.+
T Consensus 1132 ~~~~s~dg~~la-t~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~v 1202 (1249)
T 3sfz_A 1132 CSAFSLDGILLA-TGDDNGEIRIW--NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKW 1202 (1249)
T ss_dssp EEEECSSSSEEE-EEETTSCCCEE--ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES------SSEEE
T ss_pred EEEECCCCCEEE-EEeCCCEEEEE--ECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC------CeEEE
Confidence 678999999664 44455554454 77777644321 2223456678999999886542 35777
Q ss_pred EEeccc
Q 004141 463 GYFVDK 468 (771)
Q Consensus 463 ~~~~~~ 468 (771)
.++.++
T Consensus 1203 wd~~~g 1208 (1249)
T 3sfz_A 1203 WNVATG 1208 (1249)
T ss_dssp BCSSSC
T ss_pred EECCCC
Confidence 766544
No 283
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.34 E-value=2.6e-11 Score=125.15 Aligned_cols=262 Identities=11% Similarity=0.053 Sum_probs=157.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++||.....+ ...+|+ .+...+....... ......|+|||+.|+..+.+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVTET---------PVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS---------CEEEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeeccCC---------cEEEEEEeCCCCEEEEECCCCEE
Confidence 4588999999999998776543 566773 3333333322111 12588999999999988876543
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc-eeeccCCCCCCccceEEEecC-CCCC
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPL-NEGL 254 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~-~~~l~~~~~~~~~~~~~wspD-g~~~ 254 (771)
+ .|+............+......+.|.++....+++..+..|.+||+.++. ..... ......+..++|+|+ ++.
T Consensus 80 ~--vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~- 155 (304)
T 2ynn_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (304)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECTTCTTE-
T ss_pred E--EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECCCCCCE-
Confidence 3 34432222222233344555567788886666777778999999998874 33321 334456788999995 454
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecC-CCCccccceeecC--CCCE
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLT-ESISSAFFPRFSP--DGKF 330 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt-~~~~~~~~p~~Sp--DG~~ 330 (771)
|+..+ .+..|.++|+ ..+ ....+. .....+....|+| |++.
T Consensus 156 ---l~sgs---------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (304)
T 2ynn_A 156 ---FASGC---------------LDRTVKVWSL-----------------GQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (304)
T ss_dssp ---EEEEE---------------TTSEEEEEET-----------------TCSSCSEEEECCCTTCEEEEEECCSTTCCE
T ss_pred ---EEEEe---------------CCCeEEEEEC-----------------CCCCccceeccCCcCcEEEEEEEEcCCCCE
Confidence 44443 2336888887 332 223332 3334456667765 7788
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~ 410 (771)
|+..+.+ ..|.+||+.+++......+ +...+...+|+|+++.| ++...+
T Consensus 201 l~s~s~D-----------~~i~iWd~~~~~~~~~~~~-------------------h~~~v~~~~~~p~~~~l-~s~s~D 249 (304)
T 2ynn_A 201 MITASDD-----------LTIKIWDYQTKSCVATLEG-------------------HMSNVSFAVFHPTLPII-ISGSED 249 (304)
T ss_dssp EEEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEEECSSSSEE-EEEETT
T ss_pred EEEEcCC-----------CeEEEEeCCCCccceeeCC-------------------CCCCEEEEEECCCCCEE-EEEcCC
Confidence 8766654 3588999877543211100 01124467899999844 566666
Q ss_pred CeeEEEEEECCCCcEEEecCC-CCCceeeEEeecCCE
Q 004141 411 SSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDN 446 (771)
Q Consensus 411 ~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~dg~~ 446 (771)
+...|| |+.+++..+.... ........++|+++.
T Consensus 250 g~i~iW--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 250 GTLKIW--NSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp SCEEEE--ETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred CeEEEE--ECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 666665 7878876654433 233333455676654
No 284
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.33 E-value=8.5e-12 Score=123.24 Aligned_cols=198 Identities=11% Similarity=0.098 Sum_probs=122.6
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCC---cEEEEECCCCCCC--CChhhh----hc-----CCCC-cc----ccchh
Q 004141 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVG---YSLLIVNYRGSLG--FGEEAL----QS-----LPGK-VG----SQDVN 598 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G---~~Vv~~d~rG~~~--~g~~~~----~~-----~~~~-~~----~~~~~ 598 (771)
+.||++||.+.+ ...|..++..|++.| +.|+.+|+++.+. +...+. +. ...+ .+ ....+
T Consensus 5 ~pvv~iHG~~~~--~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSAS--QNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGGG--HHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCC--HHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 458889996654 457888899998876 6788777665221 000000 00 0000 00 12246
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC-----CCceeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004141 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
++.++++.+.++. +.+++.|+||||||.++..++.++ ++.++.+|++++..+.... .+.
T Consensus 83 ~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~-----~~~--------- 146 (250)
T 3lp5_A 83 WLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMEST-----STT--------- 146 (250)
T ss_dssp HHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCC-----CSS---------
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccc-----ccc---------
Confidence 7777788877663 457899999999999999998877 6788998888765432211 000
Q ss_pred CCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeC----CCCccCcHHHHHHHHHHHhCCCCEEEEEeC--CCCc
Q 004141 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA----QDLRVPVSNGLQYARALREKGVETKVIVFP--NDVH 747 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~----~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~--~~~H 747 (771)
........+... ...+.+ ++|+|+|+|+ .|..||.+.++.+...+.......+.+.+. +++|
T Consensus 147 ---------~~~~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H 214 (250)
T 3lp5_A 147 ---------AKTSMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAH 214 (250)
T ss_dssp ---------CCCHHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSS
T ss_pred ---------ccCHHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCch
Confidence 000111122111 112222 6899999999 999999998888777776533344445554 4679
Q ss_pred cCCCCCChHHHHHHHHHHHH
Q 004141 748 GIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~fl~ 767 (771)
..... +. ++.+.|.+||.
T Consensus 215 ~~l~e-~~-~v~~~I~~FL~ 232 (250)
T 3lp5_A 215 SDLPQ-NK-QIVSLIRQYLL 232 (250)
T ss_dssp CCHHH-HH-HHHHHHHHHTS
T ss_pred hcchh-CH-HHHHHHHHHHh
Confidence 76533 33 67788888875
No 285
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.33 E-value=4.7e-11 Score=124.77 Aligned_cols=228 Identities=11% Similarity=0.011 Sum_probs=138.9
Q ss_pred eEEEEe-cCCcceEEEecCC---cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCC
Q 004141 125 IQFELW-SQSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 200 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (771)
.+..++ ..++..+.+.... .. ..++|||||++|++....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--------------------------- 54 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP----------MVPMVAPGGRIAYATVNK--------------------------- 54 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC----------CCEEECTTSSEEEEEETT---------------------------
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc----------cceEEcCCCCEEEEEeCC---------------------------
Confidence 455555 4455555555433 23 589999999988776432
Q ss_pred cccccCCcCcccCCccCceEEEEEccCCceeeccCCCC----CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeec
Q 004141 201 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 276 (771)
Q Consensus 201 ~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~----~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~ 276 (771)
...|++||+.+++......... ...+..++|+|||+. |++........+... .
T Consensus 55 ----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~~---~ 111 (337)
T 1pby_B 55 ----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT----LAIYESPVRLELTHF---E 111 (337)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE----EEEEEEEEEECSSCE---E
T ss_pred ----------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE----EEEEecccccccccc---c
Confidence 2579999999888654311121 114668899999997 777642110000000 0
Q ss_pred cCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004141 277 NRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 277 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
.....|+++|+ .+++.............+.|||||++|++.+ ..|+++|+
T Consensus 112 ~~~~~i~v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-------------~~i~~~d~ 161 (337)
T 1pby_B 112 VQPTRVALYDA-----------------ETLSRRKAFEAPRQITMLAWARDGSKLYGLG-------------RDLHVMDP 161 (337)
T ss_dssp ECCCEEEEEET-----------------TTTEEEEEEECCSSCCCEEECTTSSCEEEES-------------SSEEEEET
T ss_pred ccCceEEEEEC-----------------CCCcEEEEEeCCCCcceeEECCCCCEEEEeC-------------CeEEEEEC
Confidence 02358999998 5555443333344567789999999988772 24999998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee---------------------EE
Q 004141 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ---------------------VI 415 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~---------------------~l 415 (771)
.+++.... +.. .. ......|+|||+.|++.....+.. .|
T Consensus 162 ~~~~~~~~----------~~~---~~-------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 162 EAGTLVED----------KPI---QS-------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TTTEEEEE----------ECS---TT-------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCcEeee----------eec---cc-------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 87653211 100 00 012347899998776654333322 68
Q ss_pred EEEECCCCcEEEecCC--CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 416 ISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 416 ~~~d~~tg~~~~l~~~--~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
+.+|+.+++...+... ........+++||+.+++. . ..|++.++.++
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~ 270 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKN 270 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTT
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCC
Confidence 8999999987644322 1223457899999998876 1 57888876543
No 286
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.33 E-value=2.1e-11 Score=128.08 Aligned_cols=260 Identities=9% Similarity=0.024 Sum_probs=150.8
Q ss_pred cceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC-cceEEEecCCcc
Q 004141 69 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS-QLEKEFHVPQTV 145 (771)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 145 (771)
...+.+.+|++... .....+... ...+...+|||+|++||...... ...+|+ .+ ...++...-.+.
T Consensus 74 s~Dg~v~iWd~~~~-~~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~d~-----~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 74 SQDGKLIIWDSYTT-NKVHAIPLR-----SSWVMTCAYAPSGNYVACGGLDN-----ICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp ETTTEEEEEETTTC-CEEEEEECS-----SSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTCSBSCEEEEEEECC
T ss_pred eCCCcEEEEECCCC-CcceEeecC-----CccEEEEEECCCCCEEEEEeCCC-----eEEEEECccCCCcceeEEEecCC
Confidence 34467777776332 122222211 24578899999999998775543 455552 11 111221111111
Q ss_pred cccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc
Q 004141 146 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 225 (771)
Q Consensus 146 ~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~ 225 (771)
.+. +....|+|+++ |+..+.+...+ .|+............+........|.++....+++..+..|.+||+
T Consensus 143 ~~~------v~~~~~~~~~~-l~s~s~d~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 143 TGY------LSCCRFLDDNQ-IVTSSGDTTCA--LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp SSC------EEEEEEEETTE-EEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred Ccc------EEEEEECCCCc-EEEEECCCcEE--EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 112 26788999986 66655544322 3332222111122223334445667887655666677889999999
Q ss_pred cCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC
Q 004141 226 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 305 (771)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 305 (771)
.+++..... ......+..++|+|||+. |+..+ .+..|.++|+ .
T Consensus 214 ~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~d~~v~iwd~-----------------~ 256 (340)
T 1got_B 214 REGMCRQTF-TGHESDINAICFFPNGNA----FATGS---------------DDATCRLFDL-----------------R 256 (340)
T ss_dssp TTCSEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-----------------T
T ss_pred CCCeeEEEE-cCCcCCEEEEEEcCCCCE----EEEEc---------------CCCcEEEEEC-----------------C
Confidence 888765431 334556889999999997 77655 2336888887 4
Q ss_pred CCcc-eecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCC
Q 004141 306 DLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 382 (771)
Q Consensus 306 ~~~~-~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (771)
.++. ..+... ...+.+..|||||+.|+..+.+ ..|.+||+.+++......+
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~~~~--------------- 310 (340)
T 1got_B 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----------FNCNVWDALKADRAGVLAG--------------- 310 (340)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCEEEEEEC---------------
T ss_pred CCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-----------CeEEEEEcccCcEeeEeec---------------
Confidence 4332 223222 2357889999999988876654 3588999876543111000
Q ss_pred CcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 383 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 383 f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+...+..++|+|||+.| ++.+.++...||
T Consensus 311 ----h~~~v~~~~~s~dg~~l-~s~s~D~~i~iW 339 (340)
T 1got_B 311 ----HDNRVSCLGVTDDGMAV-ATGSWDSFLKIW 339 (340)
T ss_dssp ----CSSCEEEEEECTTSSCE-EEEETTSCEEEE
T ss_pred ----CCCcEEEEEEcCCCCEE-EEEcCCccEEec
Confidence 11134567899999855 566667776666
No 287
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.33 E-value=3.4e-11 Score=127.04 Aligned_cols=291 Identities=12% Similarity=0.038 Sum_probs=169.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEec--CCcccccccCCCcccceeecCC---CCeEEEEe
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV--PQTVHGSVYADGWFEGISWNSD---ETLIAYVA 171 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~wSpD---g~~la~~~ 171 (771)
..+...+|||+|++++...... .....+.+| ..++...+... ...+ .+++|+|+ |+.|+..+
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPI----------KCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCE----------EEEECTTCCTTTCCEEEEE
T ss_pred CceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcE----------EEEEEcCCCCCCceEEEec
Confidence 4588899999998887765431 112244455 33333333322 2222 68999999 68888877
Q ss_pred cCCCCCCCCccCCCCC-CCCCCccCCCCCCcc------cccCCcCcccCCccCceEEEEEccCCc--eeeccCCCC--CC
Q 004141 172 EEPSPSKPTFSLGSTK-GGSSDKDCNSWKGQG------DWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPK--SL 240 (771)
Q Consensus 172 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~d~g~~~~~~~~~~l~v~d~~~~~--~~~l~~~~~--~~ 240 (771)
.+.... .|+..... .......+....... .|+++....+++.....|.+||+.+++ ...+..... ..
T Consensus 88 ~dg~i~--iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 88 FGGNLH--IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp TTSCEE--EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred CCCeEE--EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 665432 33322221 111112222222222 456665566666677899999998875 333421111 12
Q ss_pred ccceEE----EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCC
Q 004141 241 SVGQVV----WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI 316 (771)
Q Consensus 241 ~~~~~~----wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~ 316 (771)
.+..+. |+||++. |+..+ ....|+++|+ .+++........
T Consensus 166 ~v~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~ 209 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERV----VCAGY---------------DNGDIKLFDL-----------------RNMALRWETNIK 209 (357)
T ss_dssp CEEEEEEECCCC-CCCE----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECS
T ss_pred ceEEEEEEeccCCCCCE----EEEEc---------------cCCeEEEEEC-----------------ccCceeeecCCC
Confidence 445555 7899986 66654 3347899998 666666556666
Q ss_pred ccccceeecC---CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004141 317 SSAFFPRFSP---DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 317 ~~~~~p~~Sp---DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
..+....|+| +|+.|+..+.+ ..|.+||+.++......... ... . ....+..
T Consensus 210 ~~v~~~~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~-----~~~----~-----~~~~v~~ 264 (357)
T 3i2n_A 210 NGVCSLEFDRKDISMNKLVATSLE-----------GKFHVFDMRTQHPTKGFASV-----SEK----A-----HKSTVWQ 264 (357)
T ss_dssp SCEEEEEESCSSSSCCEEEEEEST-----------TEEEEEEEEEEETTTEEEEE-----EEE----C-----CSSCEEE
T ss_pred CceEEEEcCCCCCCCCEEEEECCC-----------CeEEEEeCcCCCcccceeee-----ccC----C-----CcCCEEE
Confidence 7789999999 99998877654 25888888765432211000 000 0 1113456
Q ss_pred CccccCCCEEEEEeeeCCeeEEEEEECCCC------------------cEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004141 394 NPWLSDGCTMLLSSIWGSSQVIISVNVSSG------------------ELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 394 ~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg------------------~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
++|+||++.++++...++...+|.++.... .+..+......+....|+++++.|+++.+..
T Consensus 265 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d- 343 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD- 343 (357)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT-
T ss_pred EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC-
Confidence 789999987777877788888887764221 1223333444456678889988887555422
Q ss_pred CCCeEEEEEec
Q 004141 456 DVPQVKYGYFV 466 (771)
Q Consensus 456 ~p~~l~~~~~~ 466 (771)
..+.+.++.
T Consensus 344 --~~i~iw~~~ 352 (357)
T 3i2n_A 344 --QTVRVLIVT 352 (357)
T ss_dssp --SEEEEEEEC
T ss_pred --CcEEEEECC
Confidence 345555543
No 288
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.33 E-value=1.3e-10 Score=123.47 Aligned_cols=256 Identities=13% Similarity=0.012 Sum_probs=131.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeE-EEEec-------C-
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKL-LVVRN-------P- 119 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~l-a~~~~-------~- 119 (771)
.++||+.|+.. +. . .+.++++... ++..++...+.. +....++|||||++| +++.+ .
T Consensus 47 ~spdg~~l~~~-~~-------~--~v~~~~~~~~-g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 47 FDHERKNIYGA-AM-------K--KWSSFAVKSP-TEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp ECTTSSEEEEE-EB-------T--EEEEEEEEET-TEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred ECCCCCEEEEE-cc-------c--eEEEEEECCC-CCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 46799877543 22 1 4666666422 233332211100 113347899999973 45543 1
Q ss_pred ----CCCCCeEEEEecCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCcc
Q 004141 120 ----ENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 194 (771)
Q Consensus 120 ----~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (771)
.++.-.+|.+...++....+.. ..... ....++.|||||++|+.. ..
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~spdG~~l~~~-~~--------------------- 164 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN------TGIHGMVFDPTETYLYSA-DL--------------------- 164 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTT------CCEEEEEECTTSSEEEEE-ET---------------------
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCC------CcceEEEECCCCCEEEEE-cC---------------------
Confidence 2233344555434444333321 10000 012488999999987554 21
Q ss_pred CCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceeecc--CCCC-CCccceEEEecCCCCCccEEEEEeecCcceee
Q 004141 195 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVK--GIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 270 (771)
Q Consensus 195 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~l~--~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~ 270 (771)
....|++||++ +|+.+.+. ..+. ...+..++|||||+. |++... ..
T Consensus 165 ---------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~-~~---- 214 (365)
T 1jof_A 165 ---------------------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY----LYALME-AG---- 214 (365)
T ss_dssp ---------------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE----EEEEET-TT----
T ss_pred ---------------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE----EEEEEC-CC----
Confidence 22579999998 77764431 0121 345778899999997 766542 11
Q ss_pred eeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcce-------ecCCC-C--c-------ccccee-ecCCCCEEE
Q 004141 271 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-------NLTES-I--S-------SAFFPR-FSPDGKFLV 332 (771)
Q Consensus 271 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~lt~~-~--~-------~~~~p~-~SpDG~~l~ 332 (771)
....+|.++. .+++.. .+... . . ....++ |||||++|+
T Consensus 215 -------~~v~v~~~~~-----------------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 215 -------NRICEYVIDP-----------------ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp -------TEEEEEEECT-----------------TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred -------CeEEEEEEeC-----------------CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 1113444443 334321 12111 0 1 356788 999999885
Q ss_pred EEecCCCCCCCCccccccceeeecC-CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc---CCCEEEEEee
Q 004141 333 FLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS---DGCTMLLSSI 408 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~---Dg~~l~~~~~ 408 (771)
....... ......|.+++++ +++...+ ...... .......++|+| ||++|++...
T Consensus 271 v~~~~~~-----~~~~~~i~v~~~~~~g~~~~~-------~~~~~~---------~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 271 ASSRANK-----FELQGYIAGFKLRDCGSIEKQ-------LFLSPT---------PTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp EEEEESS-----TTSCCEEEEEEECTTSCEEEE-------EEEEEC---------SSCCTTCCCEEECTTCTTEEEEECS
T ss_pred EECCCCC-----CCCCCeEEEEEECCCCCEEEe-------eeeeec---------CCCCcccceecCCCcCCCEEEEEEc
Confidence 4332210 0001257777775 3332111 000000 001245678999 8998877655
Q ss_pred eCCeeEEEEEECC
Q 004141 409 WGSSQVIISVNVS 421 (771)
Q Consensus 409 ~~~~~~l~~~d~~ 421 (771)
..+...+|.++.+
T Consensus 330 ~~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 QEGWLEIYRWKDE 342 (365)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCeEEEEEEchh
Confidence 5567778877753
No 289
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=2.1e-11 Score=131.78 Aligned_cols=278 Identities=11% Similarity=0.061 Sum_probs=163.3
Q ss_pred EEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcc
Q 004141 56 AMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL 135 (771)
Q Consensus 56 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~ 135 (771)
++|..+..-+..+...+.+.+|++.... ....+.. ....+...+|+|+|+.|+..+... .+.+|+-...
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-~~~~l~~-----h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~ 182 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGD-FERTLKG-----HTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGF 182 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCC-CCEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEEEec-----cCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC
Confidence 3333333334444455677887774332 1222221 225688899999999888765543 3344521111
Q ss_pred eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCc
Q 004141 136 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK 215 (771)
Q Consensus 136 ~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 215 (771)
..+..+. +..+ .+.+++|+|||+.|+..+.++..+ .|+............+..+.....+.++....+++.
T Consensus 183 ~~~~~~~-~h~~------~V~~v~~~p~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 183 ECIRTMH-GHDH------NVSSVSIMPNGDHIVSASRDKTIK--MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp CEEECCC-CCSS------CEEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ceeEEEc-CCCC------CEEEEEEeCCCCEEEEEeCCCeEE--EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 2222221 1111 236899999999998887665432 343322222222233444555566777755556666
Q ss_pred cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCC----------------ccEEEEEeecCcceeeeeeeeccCC
Q 004141 216 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL----------------HQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 216 ~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~----------------~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
.+..|.+||+.+++..... ......+..+.|+|++... +.+|+..+ .+
T Consensus 254 ~D~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs---------------~D 317 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS---------------RD 317 (410)
T ss_dssp TTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE---------------TT
T ss_pred CCCeEEEEECCCCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe---------------CC
Confidence 7789999999888765431 3444567888999974210 00033333 34
Q ss_pred ceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC
Q 004141 280 CALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
..|.++|+ .++. ...+..+...+....|+|+|++|+..+.+ ..|.+||+.+
T Consensus 318 ~~i~iwd~-----------------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----------~~i~vwd~~~ 369 (410)
T 1vyh_C 318 KTIKMWDV-----------------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD-----------KTLRVWDYKN 369 (410)
T ss_dssp SEEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT-----------TEEEEECCTT
T ss_pred CeEEEEEC-----------------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEECCC
Confidence 47889998 4444 45566667778899999999998876654 3588999876
Q ss_pred CCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004141 359 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 417 (771)
++....... +...+..++|+|++..| ++.+.++...+|.
T Consensus 370 ~~~~~~~~~-------------------h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 370 KRCMKTLNA-------------------HEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408 (410)
T ss_dssp SCCCEEEEC-------------------CSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred CceEEEEcC-------------------CCCcEEEEEEcCCCCEE-EEEeCCCcEEEEe
Confidence 553211110 11134567899999855 5666677777774
No 290
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.32 E-value=1.4e-11 Score=145.98 Aligned_cols=236 Identities=9% Similarity=0.028 Sum_probs=146.5
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
-..+|||..|+... ..+.+.+|++... .....+.... ..+..++|||||++||+....+ .
T Consensus 19 i~~sp~~~~la~~~---------~~g~v~iwd~~~~-~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg-----~ 78 (814)
T 3mkq_A 19 IDFHPTEPWVLTTL---------YSGRVEIWNYETQ-VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----R 78 (814)
T ss_dssp EEECSSSSEEEEEE---------TTSEEEEEETTTT-EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----E
T ss_pred EEECCCCCEEEEEe---------CCCEEEEEECCCC-ceEEEEecCC-----CcEEEEEEeCCCCEEEEEeCCC-----e
Confidence 34577898888764 2346777766332 2223333222 5688999999999999876543 4
Q ss_pred EEEe--cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCcc
Q 004141 127 FELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 202 (771)
+.+| ..++....... ... +..++|||||++|+..+.+.... .|+.... ........+.......
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~l~~~~~dg~i~--vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDY----------IRSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSC----------EEEEEECSSSSEEEEEETTSEEE--EEEGGGTSEEEEEEECCSSCEEEE
T ss_pred EEEEECCCCcEEEEEecCCCC----------EEEEEEeCCCCEEEEEcCCCEEE--EEECCCCceEEEEEcCCCCcEEEE
Confidence 5566 33433333321 222 26899999999999877655332 2322111 1111112233334456
Q ss_pred cccC-CcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec--CCCCCccEEEEEeecCcceeeeeeeeccCC
Q 004141 203 DWEE-DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 203 ~~~~-d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp--Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
.|++ +....+++.....|.+||+.+++............+..+.|+| ||+. |+..+ .+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----l~~~~---------------~d 207 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY----MITAS---------------DD 207 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE----EEEEC---------------TT
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE----EEEEe---------------CC
Confidence 7887 5445556666789999999877644331123335678899999 8886 66654 33
Q ss_pred ceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC
Q 004141 280 CALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
..|.++|+ .+++ ...+..+...+....|+|||+.|+..+.+. .|.+||+.+
T Consensus 208 g~i~~~d~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~v~vwd~~~ 259 (814)
T 3mkq_A 208 LTIKIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSST 259 (814)
T ss_dssp SEEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTT
T ss_pred CEEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-----------eEEEEECCC
Confidence 47888887 4443 455556667788999999999888776543 488888877
Q ss_pred CCC
Q 004141 359 NGN 361 (771)
Q Consensus 359 ~~~ 361 (771)
+..
T Consensus 260 ~~~ 262 (814)
T 3mkq_A 260 YKV 262 (814)
T ss_dssp CSE
T ss_pred CcE
Confidence 553
No 291
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=6.3e-11 Score=128.00 Aligned_cols=267 Identities=12% Similarity=0.076 Sum_probs=167.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|+|+|+.|+..+..+ .+.+| ..++..+...... +. +.+++|+|||+.|+..+.+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~h~---~~------V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLKGHT---DS------VQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEECCCS---SC------EEEEEECTTSSEEEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEeccC---Cc------EEEEEEcCCCCEEEEEeCCCeE
Confidence 4688899999999988776543 45556 3444444333211 11 2689999999999888877654
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+............+........|.++....+++..+..|.+||+.++...... ......+..+.|+|||+.
T Consensus 175 ~--iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~--- 248 (410)
T 1vyh_C 175 K--LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTL--- 248 (410)
T ss_dssp C--EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSE---
T ss_pred E--EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCE---
Confidence 4 4443222222222333344445678888666677777899999999988754431 233446778899999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC--------
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD-------- 327 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD-------- 327 (771)
|+..+ .+..|.++|+ .+++ ...+..+...+....|+|+
T Consensus 249 -l~s~s---------------~D~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 249 -IASCS---------------NDQTVRVWVV-----------------ATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred -EEEEc---------------CCCeEEEEEC-----------------CCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 66655 2336888887 4444 3456666677888999997
Q ss_pred ------------CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc
Q 004141 328 ------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 395 (771)
Q Consensus 328 ------------G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 395 (771)
|..|+..+.+ ..|.+||+.++.......+ +...+..++
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D-----------~~i~iwd~~~~~~~~~~~~-------------------h~~~v~~v~ 345 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRD-----------KTIKMWDVSTGMCLMTLVG-------------------HDNWVRGVL 345 (410)
T ss_dssp CCSCC-------CCEEEEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEE
T ss_pred hccccccccCCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEEC-------------------CCCcEEEEE
Confidence 5556555543 3588999877653211000 011245678
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecCCCCCceeeEEeecCCEEEEEE
Q 004141 396 WLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 396 ~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
|+|+|+.| ++...++...+| |+.+++ +..+......+....|++++..|+...
T Consensus 346 ~~~~g~~l-~s~s~D~~i~vw--d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 346 FHSGGKFI-LSCADDKTLRVW--DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp ECSSSSCE-EEEETTTEEEEE--CCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EcCCCCEE-EEEeCCCeEEEE--ECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 99999866 455556655555 666665 344444444456667888887665443
No 292
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.32 E-value=3.3e-10 Score=123.36 Aligned_cols=265 Identities=11% Similarity=0.097 Sum_probs=154.5
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecC
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP 142 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 142 (771)
++.+...+.|.+|++..... ...++ +....+.+...+||| ||++|+..+.++ .+.+| ..+...+.+...
T Consensus 135 lasGs~dg~i~lWd~~~~~~-~~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDK-PTFIK---GIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILRVFASS 205 (435)
T ss_dssp EEEEETTSCEEEECSSCCSC-CEEEC---CCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEEEEECC
T ss_pred EEEEeCCCEEEEEECCCCCc-eeEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCceeEEecc
Confidence 44555667888888754432 11111 111235688999999 677776654432 45666 333333333222
Q ss_pred CcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEE
Q 004141 143 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 222 (771)
Q Consensus 143 ~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v 222 (771)
.... .++.++.|+|||+.|+.... ...|++
T Consensus 206 ~~~~------~~~~~~~~~~~~~~l~~g~~--------------------------------------------dg~i~~ 235 (435)
T 4e54_B 206 DTIN------IWFCSLDVSASSRMVVTGDN--------------------------------------------VGNVIL 235 (435)
T ss_dssp SSCS------CCCCCEEEETTTTEEEEECS--------------------------------------------SSBEEE
T ss_pred CCCC------ccEEEEEECCCCCEEEEEeC--------------------------------------------CCcEee
Confidence 2111 12357899999998887532 357899
Q ss_pred EEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcC
Q 004141 223 ININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 302 (771)
Q Consensus 223 ~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 302 (771)
||+.+..+..+ ......+..+.|+|+++. +++++. .+..|.++|+
T Consensus 236 wd~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~~~s~s--------------~d~~v~iwd~--------------- 280 (435)
T 4e54_B 236 LNMDGKELWNL--RMHKKKVTHVALNPCCDW----FLATAS--------------VDQTVKIWDL--------------- 280 (435)
T ss_dssp EESSSCBCCCS--BCCSSCEEEEEECTTCSS----EEEEEE--------------TTSBCCEEET---------------
T ss_pred eccCcceeEEE--ecccceEEeeeecCCCce----EEEEec--------------CcceeeEEec---------------
Confidence 99988776666 344556889999999998 776652 2235677776
Q ss_pred CCCCCc----ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc
Q 004141 303 SSEDLP----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 378 (771)
Q Consensus 303 ~~~~~~----~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 378 (771)
...+ ......+...+.+..|||||++|+..+.+. .|.+||+.++........ ..
T Consensus 281 --~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----------~i~iwd~~~~~~~~~~~~---------~~ 338 (435)
T 4e54_B 281 --RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----------EIRVYSASQWDCPLGLIP---------HP 338 (435)
T ss_dssp --TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----------CEEEEESSSSSSEEEECC---------CC
T ss_pred --ccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----------EEEEEECCCCccceEEec---------cc
Confidence 2222 122234556688899999999998777653 488899877654211000 00
Q ss_pred CCCCCcccccCCCCCCccccCCCEEEEEeeeCC---------eeEEEEEECCCCcEEEec-CCC-CC-ceeeEEeecCCE
Q 004141 379 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS---------SQVIISVNVSSGELLRIT-PAE-SN-FSWSLLTLDGDN 446 (771)
Q Consensus 379 ~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~---------~~~l~~~d~~tg~~~~l~-~~~-~~-~~~~~~s~dg~~ 446 (771)
...+. ........|++++..++.....++ ...|..+|..+|+..... ... .. .+...|+|+|+.
T Consensus 339 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~ 414 (435)
T 4e54_B 339 -HRHFQ---HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDT 414 (435)
T ss_dssp -CCCCS---SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSC
T ss_pred -ccccc---cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCE
Confidence 00000 001234567888776665543221 124666788888866443 222 22 233468999987
Q ss_pred EEE
Q 004141 447 IIA 449 (771)
Q Consensus 447 l~~ 449 (771)
|+.
T Consensus 415 las 417 (435)
T 4e54_B 415 LAS 417 (435)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 293
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.32 E-value=1.2e-10 Score=127.24 Aligned_cols=178 Identities=8% Similarity=0.090 Sum_probs=101.6
Q ss_pred CCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceeecc------CCCCCCccceEEEecCC-CCCccEEEEEeecCc
Q 004141 195 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVK------GIPKSLSVGQVVWAPLN-EGLHQYLVFVGWSSE 266 (771)
Q Consensus 195 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~l~------~~~~~~~~~~~~wspDg-~~~~~~l~~~~~~~~ 266 (771)
+........|.++....+++ .+..|.+||+. +++...+. -......+..++|+||| +. |+..+
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~----l~s~~---- 246 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT----FVYSS---- 246 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE----EEEEE----
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE----EEEEe----
Confidence 34444566788885545555 78899999998 34333310 02234467899999999 54 44443
Q ss_pred ceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCc------------cccceeecCCCC
Q 004141 267 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESIS------------SAFFPRFSPDGK 329 (771)
Q Consensus 267 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~------------~~~~p~~SpDG~ 329 (771)
.+..|.++|+ .+++ ...+..+.. .+....|||||+
T Consensus 247 -----------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 247 -----------SKGTIRLCDM-----------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp -----------TTSCEEEEET-----------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred -----------CCCeEEEEEC-----------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence 2336888887 4443 244544443 688999999999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCC-CCCCCCccceeeEEecc-cccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVV-QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~-~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
.|+..+. ..|.+||+.+ +...........+...+ ....... + .....++|+|||+.| ++.
T Consensus 299 ~l~~~~~------------~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---i--~~~~~~~~s~~~~~l-~s~ 360 (447)
T 3dw8_B 299 YMMTRDY------------LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC---I--FDKFECCWNGSDSVV-MTG 360 (447)
T ss_dssp EEEEEES------------SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG---G--GCCCCEEECTTSSEE-EEE
T ss_pred EEEEeeC------------CeEEEEeCCCCccccceeeccccccccccccccccc---c--ccceEEEECCCCCEE-EEe
Confidence 9886554 2488899876 43322111110000000 0000000 0 012347899999977 455
Q ss_pred eeCCeeEEEEEECCCCcEEEec
Q 004141 408 IWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
..++. |+.+|+.+++...+.
T Consensus 361 s~dg~--v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 361 SYNNF--FRMFDRNTKRDITLE 380 (447)
T ss_dssp CSTTE--EEEEETTTCCEEEEE
T ss_pred ccCCE--EEEEEcCCCcceeee
Confidence 54554 555588888876654
No 294
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.31 E-value=6.7e-11 Score=127.92 Aligned_cols=289 Identities=14% Similarity=0.102 Sum_probs=169.6
Q ss_pred ccceEEEeCCCCC-eEEEEecCCCCCCeEEEEe---cCCc------ceEEEecCCccccccc-CCCcccceeecCCCCeE
Q 004141 99 TGASAVVPSPSGS-KLLVVRNPENESPIQFELW---SQSQ------LEKEFHVPQTVHGSVY-ADGWFEGISWNSDETLI 167 (771)
Q Consensus 99 ~~~~~~~~SPdG~-~la~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~g~~~-~~~~~~~~~wSpDg~~l 167 (771)
..+...+|||||+ .||..... +.-.+|.+. ..+. ...........+.... ..+.+.+++|||||+.|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred CceEEEEECCCCCcEEEEecCC--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 3578899999999 88876543 333444441 1122 1122221111110000 01134799999999999
Q ss_pred EEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCc------
Q 004141 168 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS------ 241 (771)
Q Consensus 168 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~------ 241 (771)
+....+.... .|+ ...........+........|.++....+++.....|.+||+.+++..... ......
T Consensus 124 ~~~~~dg~i~--i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELR--LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEE--EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC---------
T ss_pred EEEeCCCeEE--EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccCccceee
Confidence 9887665322 232 111111112223334445678888666666777889999999888765441 111112
Q ss_pred ---------cceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-cee
Q 004141 242 ---------VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN 311 (771)
Q Consensus 242 ---------~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~ 311 (771)
+..+.|+|++. ++..+ ....|+++|+ .+++ ...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~-----~~~~~---------------~~g~i~~~d~-----------------~~~~~~~~ 242 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDK-----FVIPG---------------PKGAIFVYQI-----------------TEKTPTGK 242 (425)
T ss_dssp ------CCCBSCCEEEETTE-----EEEEC---------------GGGCEEEEET-----------------TCSSCSEE
T ss_pred ccccCCcceeeEEEEcCCCE-----EEEEc---------------CCCeEEEEEc-----------------CCCceeee
Confidence 67789999864 44443 2347889998 4443 445
Q ss_pred cCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCC
Q 004141 312 LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 391 (771)
Q Consensus 312 lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~ 391 (771)
+..+...+....|+|||+.|+..+.+. .|.+||+.+++........ ...+
T Consensus 243 ~~~~~~~i~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~-------------------~~~i 292 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKLLLSASDDG-----------TLRIWHGGNGNSQNCFYGH-------------------SQSI 292 (425)
T ss_dssp ECCCSSCEEEEEEETTTTEEEEEETTS-----------CEEEECSSSBSCSEEECCC-------------------SSCE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCC-----------EEEEEECCCCccceEecCC-------------------CccE
Confidence 556667788999999999888776542 4888988775542211100 1124
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 392 LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 392 ~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
..++|+||+ ++++...++ .|..+|+.+++...... ....+....|+++++.|+....+ ..+.+.++.+.
T Consensus 293 ~~~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~~ 362 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDLKKL 362 (425)
T ss_dssp EEEEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEECHHH
T ss_pred EEEEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEECCCC
Confidence 567899999 445554444 45666887887665443 34456667889999877765532 35777776543
No 295
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.31 E-value=9.7e-12 Score=132.61 Aligned_cols=234 Identities=10% Similarity=0.057 Sum_probs=135.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.+...+|||||++||..... +.-.+|.+.. +....+..+. ...+ .+..+.|+|||++|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~~-~~~~~~~~~~-~h~~------~v~~~~~s~~~~~l~s~s~d------ 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT--NQVELYEQDG-NGWKHARTFS-DHDK------IVTCVDWAPKSNRIVTCSQD------ 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS--SCBCEEEEET-TEEEECCCBC-CCSS------CEEEEEECTTTCCEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCC--CEEEEEEccC-CceEEEEEEe-cCCc------eEEEEEEeCCCCEEEEEeCC------
Confidence 47788999999998765432 3344444432 2111111111 1111 23689999999999886532
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCc
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
..|.+||+.+++ ...+ ......+..+.|+|||+.
T Consensus 77 --------------------------------------~~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-- 114 (377)
T 3dwl_C 77 --------------------------------------RNAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDK-- 114 (377)
T ss_dssp --------------------------------------SSEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSC--
T ss_pred --------------------------------------CeEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCE--
Confidence 568899988876 3344 345557889999999998
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc----ceecCC-CCccccceeecCCCCE
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTE-SISSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~lt~-~~~~~~~p~~SpDG~~ 330 (771)
|+..+ .+..|.++|+ .+++ ...+.. +...+....|+|||+.
T Consensus 115 --l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 115 --FAVGS---------------GARVISVCYF-----------------EQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp --CEEEE---------------SSSCEEECCC----------------------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------cCCeEEEEEE-----------------CCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 88776 2336777777 4443 455665 6777899999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccc--------eeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~ 402 (771)
|+..+.+. .|.+||+..++....... .......+ .+...+..++|+|||+.
T Consensus 161 l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 161 LAAGCADR-----------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----------PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EEEEESSS-----------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----------CCSSSEEEEEECTTSSC
T ss_pred EEEEeCCC-----------EEEEEEEEecccCCCccccccccccchhhhhhcc----------cCCceEEEEEECCCCCE
Confidence 98877653 478888765432111000 00111111 01123457789999996
Q ss_pred EEEEeeeCCeeEEEEEECCCCcE-----EEecCCCCCceeeEEeecCCEEEE
Q 004141 403 MLLSSIWGSSQVIISVNVSSGEL-----LRITPAESNFSWSLLTLDGDNIIA 449 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~-----~~l~~~~~~~~~~~~s~dg~~l~~ 449 (771)
|+ +...++...|| |+.+++. ..+......+....|+++++.|+.
T Consensus 220 l~-~~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 220 LA-YAGHDSSVTIA--YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAA 268 (377)
T ss_dssp EE-EEETTTEEC-C--EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEE
T ss_pred EE-EEeCCCcEEEE--ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEE
Confidence 65 44455555555 5556653 334444444566789999876543
No 296
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.29 E-value=2.6e-11 Score=150.63 Aligned_cols=272 Identities=11% Similarity=-0.010 Sum_probs=165.1
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+...+|||+|+.+++....+ . +...+ ..+....... ...+ .+.+++|||||+.|+..+.+....
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g--~--i~i~d~~~~~~~~~~~---~h~~------~v~~l~~s~dg~~l~s~~~dg~i~- 1028 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDG--A--IKIIELPNNRVFSSGV---GHKK------AVRHIQFTADGKTLISSSEDSVIQ- 1028 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTS--C--CEEEETTTTSCEEECC---CCSS------CCCCEEECSSSSCEEEECSSSBEE-
T ss_pred cEEEEEEcCCCCEEEEEcCCC--C--EEEEEcCCCceeeecc---cCCC------ceEEEEECCCCCEEEEEcCCCEEE-
Confidence 467789999999998876543 2 33223 2333222221 1111 226899999999999887665332
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.|+....... ....+......+.|.++ +..+++.....|.+||+.+++..... ......+..++|||||+. |
T Consensus 1029 -vwd~~~~~~~-~~~~~~~~v~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~----l 1100 (1249)
T 3sfz_A 1029 -VWNWQTGDYV-FLQAHQETVKDFRLLQD-SRLLSWSFDGTVKVWNVITGRIERDF-TCHQGTVLSCAISSDATK----F 1100 (1249)
T ss_dssp -EEETTTTEEE-CCBCCSSCEEEEEECSS-SEEEEEESSSEEEEEETTTTCCCEEE-ECCSSCCCCEEECSSSSS----C
T ss_pred -EEECCCCceE-EEecCCCcEEEEEEcCC-CcEEEEECCCcEEEEECCCCceeEEE-cccCCcEEEEEECCCCCE----E
Confidence 2332111111 11122222334456665 45566667789999999988754431 234456788999999998 8
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCCEEEEEecC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
+..+ .+..|.++|+ .++ ....+..+...+...+|||||+.|+..+.+
T Consensus 1101 ~s~s---------------~d~~v~iwd~-----------------~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1101 SSTS---------------ADKTAKIWSF-----------------DLLSPLHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp EEEC---------------CSSCCCEECS-----------------SSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCcceeeeeccCCCcEEEEEECCCCCEEEEEeCC
Confidence 8766 2236777787 433 445666677778999999999999887755
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004141 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 417 (771)
. .|.+||+.+++.......... ..... .+...+..++|||||+.|+... + .+..
T Consensus 1149 g-----------~i~vwd~~~~~~~~~~~~~~~---------~~~~~-~~~~~v~~l~fs~dg~~l~s~~---g--~v~v 1202 (1249)
T 3sfz_A 1149 G-----------EIRIWNVSDGQLLHSCAPISV---------EEGTA-THGGWVTDVCFSPDSKTLVSAG---G--YLKW 1202 (1249)
T ss_dssp S-----------CCCEEESSSSCCCCCCCCCC-----------------CCSCCCEEEECTTSSCEEEES---S--SEEE
T ss_pred C-----------EEEEEECCCCceEEEeccccc---------ccccc-ccCceEEEEEECCCCCEEEECC---C--eEEE
Confidence 3 488899888765332111000 00000 0122466789999999776442 3 4566
Q ss_pred EECCCCcEEEecC-CCCCceeeEEeecCCEEEEEE
Q 004141 418 VNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 418 ~d~~tg~~~~l~~-~~~~~~~~~~s~dg~~l~~~~ 451 (771)
+|+.+|+...... ....+....|++|++.++...
T Consensus 1203 wd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1203 WNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp BCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEEC
T ss_pred EECCCCceeeeeeccCCcccEEEECCCCCEEEEec
Confidence 6877877543332 333455678999998777643
No 297
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.29 E-value=3.3e-10 Score=121.92 Aligned_cols=274 Identities=14% Similarity=0.111 Sum_probs=164.1
Q ss_pred EEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcc
Q 004141 58 FSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQL 135 (771)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~ 135 (771)
+.++...+......+.+++|++... +..++.... ....+...+|||||+.|+.....+ .+.+| ..++.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~--~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~ 168 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSG--SVSALAETD---ESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTK 168 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTC--CEEEEEECC---TTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCE
T ss_pred EeecCCCEEEEECCCeEEEeeCCCC--cEeEeeecC---CCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeE
Confidence 3333333444445567888776433 333222221 124588999999999998876543 34455 23333
Q ss_pred eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCc
Q 004141 136 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK 215 (771)
Q Consensus 136 ~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 215 (771)
.+.... ..+ .+..++| +++.|+..+.
T Consensus 169 ~~~~~~---~~~------~v~~~~~--~~~~l~~~~~------------------------------------------- 194 (401)
T 4aez_A 169 LRTMAG---HQA------RVGCLSW--NRHVLSSGSR------------------------------------------- 194 (401)
T ss_dssp EEEECC---CSS------CEEEEEE--ETTEEEEEET-------------------------------------------
T ss_pred EEEecC---CCC------ceEEEEE--CCCEEEEEcC-------------------------------------------
Confidence 333221 111 1257778 5666666432
Q ss_pred cCceEEEEEccCC-c-eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004141 216 RQPSLFVININSG-E-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 216 ~~~~l~v~d~~~~-~-~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
...|.+||+... . ...+ ......+..+.|+|||+. |+..+ .+..|.++|+
T Consensus 195 -dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~------ 246 (401)
T 4aez_A 195 -SGAIHHHDVRIANHQIGTL--QGHSSEVCGLAWRSDGLQ----LASGG---------------NDNVVQIWDA------ 246 (401)
T ss_dssp -TSEEEEEETTSSSCEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET------
T ss_pred -CCCEEEEecccCcceeeEE--cCCCCCeeEEEEcCCCCE----EEEEe---------------CCCeEEEccC------
Confidence 368899998743 3 3334 344557888999999987 77665 2347888998
Q ss_pred hhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEE
Q 004141 294 ASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 372 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 372 (771)
.+++ ...+..+...+....|+|+|+.++...... ....|.+||+.+++......
T Consensus 247 -----------~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs--------~d~~i~i~d~~~~~~~~~~~------ 301 (401)
T 4aez_A 247 -----------RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT--------MDKQIHFWNAATGARVNTVD------ 301 (401)
T ss_dssp -----------TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT--------TTCEEEEEETTTCCEEEEEE------
T ss_pred -----------CCCCccEEecCCcceEEEEEECCCCCCEEEEecCC--------CCCEEEEEECCCCCEEEEEe------
Confidence 4444 445666777789999999998887765311 12469999988765421110
Q ss_pred ecccccCCCCCcccccCCCCCCccccCCCEEEEEee-eCCeeEEEEEECCCCcEEEe---cCCCCCceeeEEeecCCEEE
Q 004141 373 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNII 448 (771)
Q Consensus 373 ~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~-~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~dg~~l~ 448 (771)
. ...+..++|+||++.|+.... .++...+| ++.+++...+ ......+....|+++++.|+
T Consensus 302 ----~----------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~--~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 302 ----A----------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW--SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp ----C----------SSCEEEEEECSSSSEEEEEECTTTCEEEEE--EEETTEEEEEEEEECCSSCCCEEEECTTSSEEE
T ss_pred ----C----------CCcEEEEEECCCCCeEEEEeecCCCcEEEE--ecCCccceeEEEecCCCCCEEEEEECCCCCEEE
Confidence 0 012457789999997766543 45555555 5546554443 33444556678999999776
Q ss_pred EEEeCCCCCCeEEEEEeccc
Q 004141 449 AVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 449 ~~~~~~~~p~~l~~~~~~~~ 468 (771)
.... -..|.+.++.++
T Consensus 366 s~~~----dg~i~iw~~~~~ 381 (401)
T 4aez_A 366 TAAS----DENLKFWRVYDG 381 (401)
T ss_dssp EECT----TSEEEEEECCC-
T ss_pred EEeC----CCcEEEEECCCC
Confidence 5442 245777666544
No 298
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.29 E-value=1.4e-11 Score=124.41 Aligned_cols=211 Identities=13% Similarity=0.061 Sum_probs=113.5
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004141 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
.+..+.||++||++.+ ...|...+. | ..+|.|+++|++|. +.+.. . ...++++.+.+..+++.. .
T Consensus 18 ~~~~~~lv~lhg~~~~--~~~~~~~~~-l-~~~~~v~~~d~~G~---~~~~~---~----~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGS--AFSYASLPR-L-KSDTAVVGLNCPYA---RDPEN---M----NCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TTSSEEEEEECCTTCC--GGGGTTSCC-C-SSSEEEEEEECTTT---TCGGG---C----CCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHh-c-CCCCEEEEEECCCC---CCCCC---C----CCCHHHHHHHHHHHHHHh-C
Confidence 3456889999997765 334555555 5 67899999999993 22211 1 123444443333322221 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHh---hCCCceeEEEecCCccchhhhhcCCCCCc--chhhhhccCCCC----c--cCCCC
Q 004141 614 NPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTTDIPD--WCYVESYGSKGK----D--SFTES 682 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~~~v~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~--~~~~~ 682 (771)
...++.|+||||||.+++.++. .+++.++++|+.++...... ...+. ..+......... . .....
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAM----EQLPRAFYEHCNSIGLFATQPGASPDGSTEP 158 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCC----CCCCHHHHHHHHHTTTTTTSSSSCSSSCSCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcc----cccCHHHHHHHHHHHHhCCCccccccCCHHH
Confidence 2358999999999999999987 67888999888876432100 00000 000011100000 0 00000
Q ss_pred CCh------hhHHHHhhcCcccccCCCCCcEE-EEeeCC---CCccC--------------cHHHHHHHHHHHhCCCCEE
Q 004141 683 PSV------EDLTRFHSKSPISHISKVKTPTI-FLLGAQ---DLRVP--------------VSNGLQYARALREKGVETK 738 (771)
Q Consensus 683 ~~~------~~~~~~~~~sp~~~~~~i~~P~l-ii~G~~---D~~vp--------------~~~~~~~~~~l~~~g~~~~ 738 (771)
... .+........+ ....++++|++ +++|++ |..++ ......+.+.+. +.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~ 235 (265)
T 3ils_A 159 PSYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GASFD 235 (265)
T ss_dssp CTTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--cccee
Confidence 000 00111111111 12346889977 999999 99883 333333333221 13689
Q ss_pred EEEeCCCCccCCC-CCChHHHHHHHHHHH
Q 004141 739 VIVFPNDVHGIER-PQSDFESFLNIGLWF 766 (771)
Q Consensus 739 ~~~~~~~~H~~~~-~~~~~~~~~~i~~fl 766 (771)
+++++++||.+.. .+....+.+.|.+||
T Consensus 236 ~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 236 IVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 9999999997662 333335555555554
No 299
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.28 E-value=1.8e-12 Score=142.99 Aligned_cols=222 Identities=14% Similarity=0.091 Sum_probs=131.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHH-HHCCcEEEEECCCC-CCCCChhhhhcCCCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFL-SSVGYSLLIVNYRG-SLGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~l-a~~G~~Vv~~d~rG-~~~~g~~~~~~~~~~ 591 (771)
+.|.+ ...+|.|.+....++.|+||++|||++..... .+....... ...|++|+.+|||. .-||+........ .
T Consensus 82 ~edcl--~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~ 158 (522)
T 1ukc_A 82 SEDCL--FINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQN-G 158 (522)
T ss_dssp ESCCC--EEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHS-S
T ss_pred CCcCC--EEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhcccc-C
Confidence 33454 44678887544456789999999998765433 232211111 25699999999994 2223322111111 1
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHhhC----CCceeEEEecCCccchhhhhcCCCCCc
Q 004141 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPD 664 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~p~~~~~~~~~~~~~~~ 664 (771)
.+...+.|+.++++|+.++. ..|++||.|+|+|.||.++..++... +.+|+++|+.+|...... ......
T Consensus 159 ~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~---~~~~~~ 235 (522)
T 1ukc_A 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQR---TVSEME 235 (522)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCC---CSGGGH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcC---CHHHHH
Confidence 12345889999999998752 36999999999999999888776643 568999999998753211 000000
Q ss_pred c---hhhhhccCCCCccCCCCCChhhHHHHhhcCcccc---------cCCCCCc--EEEEeeCCCCccCcHHHHHHHHHH
Q 004141 665 W---CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---------ISKVKTP--TIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 665 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---------~~~i~~P--~lii~G~~D~~vp~~~~~~~~~~l 730 (771)
+ .+....+.. ...+..+.++..++... ......| .+..+...|..+.+++..++.+.-
T Consensus 236 ~~~~~~~~~~gc~--------~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g 307 (522)
T 1ukc_A 236 FQFERFVNDTGCS--------SARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAG 307 (522)
T ss_dssp HHHHHHHHHTTCT--------TCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHT
T ss_pred HHHHHHHHHcCCC--------CHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcC
Confidence 1 111222221 00112222222222111 1112233 455667778777777777777666
Q ss_pred HhCCCCEEEEEeCCCCccCC
Q 004141 731 REKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~ 750 (771)
+..++++-+-...+++|.+.
T Consensus 308 ~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 308 NFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp CSCCCCEEEEEETBGGGGTS
T ss_pred CCCCCCEEEEeecchhHHhh
Confidence 55667777777888899775
No 300
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.28 E-value=1.4e-10 Score=122.01 Aligned_cols=248 Identities=11% Similarity=0.072 Sum_probs=137.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+...+|||+|+.++..+... ...+|+ .++..+.... ... +.+++|||||+.|+..+.+..
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~h~~~----------v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDK-----TLRLWDLRTGTTYKRFVGHQSE----------VYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-----EEEEEETTSSCEEEEEECCCSC----------EEEEEECSSTTEEEEEETTSC
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEcCCCCc----------EEEEEECCCCCEEEEEcCCCE
Confidence 4578899999999988765543 566673 3333322221 222 268999999999998876654
Q ss_pred CCCCCccCCCCCC--CCCCccCCCCCCcccccCCc----------CcccCCccCceEEEEEccCCceeeccCCCCCCccc
Q 004141 176 PSKPTFSLGSTKG--GSSDKDCNSWKGQGDWEEDW----------GETYAGKRQPSLFVININSGEVQAVKGIPKSLSVG 243 (771)
Q Consensus 176 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~----------g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~ 243 (771)
.+ .|+...... ......+..+.....|.++. ...+++.....|.+||........+ ......+.
T Consensus 142 i~--~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~h~~~v~ 217 (343)
T 2xzm_R 142 IK--LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF--KAHESNVN 217 (343)
T ss_dssp EE--EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE--ECCSSCEE
T ss_pred EE--EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE--cCccccce
Confidence 33 333211000 00111222333344455543 1233445567899999654444444 33445688
Q ss_pred eEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCcccccee
Q 004141 244 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPR 323 (771)
Q Consensus 244 ~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~ 323 (771)
.++|+|||+. |+..+ .+..|.++|+. ..............+...+
T Consensus 218 ~~~~s~~g~~----l~sgs---------------~dg~v~iwd~~----------------~~~~~~~~~~~~~~v~~v~ 262 (343)
T 2xzm_R 218 HLSISPNGKY----IATGG---------------KDKKLLIWDIL----------------NLTYPQREFDAGSTINQIA 262 (343)
T ss_dssp EEEECTTSSE----EEEEE---------------TTCEEEEEESS----------------CCSSCSEEEECSSCEEEEE
T ss_pred EEEECCCCCE----EEEEc---------------CCCeEEEEECC----------------CCcccceeecCCCcEEEEE
Confidence 8999999997 77665 33468888861 1222222222334578899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l 403 (771)
|||||+.|+. +.+ ..|.+||+.++....+..-. ...+... ....+ ....+..++|+|||+.|
T Consensus 263 ~sp~~~~la~-~~d-----------~~v~iw~~~~~~~~~~~~~~--~~~~~~~---~~~~~-~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 263 FNPKLQWVAV-GTD-----------QGVKIFNLMTQSKAPVCTIE--AEPITKA---EGQKG-KNPQCTSLAWNALGKKL 324 (343)
T ss_dssp ECSSSCEEEE-EES-----------SCEEEEESSSCCSCSEEECC--CCSGGGB---TTBCC-SCCCEEEEEECSSSCCE
T ss_pred ECCCCCEEEE-ECC-----------CCEEEEEeCCCCCCceEEee--cCcchhh---hhhcC-CCCceEEEEECCCCCeE
Confidence 9999987653 333 23788888776543210000 0000000 00000 11124567899999966
Q ss_pred EEEeeeCCeeEEEEEE
Q 004141 404 LLSSIWGSSQVIISVN 419 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d 419 (771)
++...++...+|.++
T Consensus 325 -~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 325 -FAGFTDGVIRTFSFE 339 (343)
T ss_dssp -EEEETTSEEEEEEEE
T ss_pred -EEecCCceEEEEEEE
Confidence 455567777777554
No 301
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.28 E-value=7.6e-12 Score=129.05 Aligned_cols=215 Identities=14% Similarity=0.098 Sum_probs=124.2
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004141 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~-~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+...++.|.... .+..+.||++||.+.+. .. |. .....|+++||.|+.+|+|| +|.+. .....
T Consensus 15 ~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~--~~~~~~~l~~~L~~~G~~v~~~d~~g---~g~~~--------~~~~~ 80 (317)
T 1tca_A 15 VLDAGLTCQGASP-SSVSKPILLVPGTGTTG--PQSFDSNWIPLSTQLGYTPCWISPPP---FMLND--------TQVNT 80 (317)
T ss_dssp HHHHTEEETTBCT-TSCSSEEEEECCTTCCH--HHHHTTTHHHHHHTTTCEEEEECCTT---TTCSC--------HHHHH
T ss_pred HHhheeeCCCCCC-CCCCCeEEEECCCCCCc--chhhHHHHHHHHHhCCCEEEEECCCC---CCCCc--------HHHHH
Confidence 3444567776543 23446799999976542 22 55 67788888999999999998 33221 01235
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCC---CceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004141 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
+++.+.++++.+.. +.+++.|+||||||.++..++..++ ++++++|+.+|.......... ...+...
T Consensus 81 ~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~--------~~~~~~~ 150 (317)
T 1tca_A 81 EYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGP--------LDALAVS 150 (317)
T ss_dssp HHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHH--------HHHTTCB
T ss_pred HHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhh--------hhhhhhc
Confidence 67778888887763 3478999999999999998888765 789999999886532211100 0000000
Q ss_pred CCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHH--HHHHHHHHHhCCCCEEEEEe-------CCC
Q 004141 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN--GLQYARALREKGVETKVIVF-------PND 745 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~--~~~~~~~l~~~g~~~~~~~~-------~~~ 745 (771)
................+.... .....+|+++++|+.|.+|++.. +......+.. .+.+.+ ++.
T Consensus 151 ~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~----a~~~~~~~~~~~~~~~ 222 (317)
T 1tca_A 151 APSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN----GKNVQAQAVCGPLFVI 222 (317)
T ss_dssp CHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT----SEEEEHHHHHCTTCCC
T ss_pred CchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeECCccccccchhhhccC----CccEEeeeccCCCCcc
Confidence 000000000001111111100 01236899999999999998765 2111111211 122222 577
Q ss_pred CccCCCCCChHHHHHHHHHHHHH
Q 004141 746 VHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~fl~~ 768 (771)
+|.... .+ ...+..+++||+.
T Consensus 223 gH~~~l-~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 223 DHAGSL-TS-QFSYVVGRSALRS 243 (317)
T ss_dssp CTTHHH-HB-HHHHHHHHHHHHC
T ss_pred Cccccc-CC-HHHHHHHHHHhcC
Confidence 896432 22 3567888888874
No 302
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.28 E-value=2.7e-12 Score=127.75 Aligned_cols=208 Identities=16% Similarity=0.161 Sum_probs=111.1
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
...+.||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+.. ...+|+.+.++.+.+.-.+.
T Consensus 11 ~~~~~lv~lhg~g~~--~~~~~~~~~~L~-~~~~vi~~Dl~G---hG~S~~---------~~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGY--SASFRPLHAFLQ-GECEMLAAEPPG---HGTNQT---------SAIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHH--HHHHHHHHHHHC-CSCCCEEEECCS---SCCSCC---------CTTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHhCC-CCeEEEEEeCCC---CCCCCC---------CCcCCHHHHHHHHHHHHHhh
Confidence 345679999997654 335777777774 579999999999 554421 12456666666655432222
Q ss_pred -CCeEEEEEcChhHHHHHHHHhh------CCCceeEEEecCCccchhhhhcCCCCCcchhhhhccC-CCC-cc------C
Q 004141 615 -PSKVTVVGGSHGGFLTTHLIGQ------APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS-KGK-DS------F 679 (771)
Q Consensus 615 -~~ri~l~G~S~GG~~a~~~a~~------~p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~------~ 679 (771)
.+++.|+||||||.+|+.+|.+ +|+.+-......|...... ............+.. ... .. .
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKK---VSHLPDDQFLDHIIQLGGMPAELVENKEV 152 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCC---CSSCTTHHHHHTTCCTTCCCCTTTHHHHT
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCccc---ccCCCHHHHHHHHHHhCCCChHHhcCHHH
Confidence 2689999999999999999876 5665311111111110000 000000000000000 000 00 0
Q ss_pred C--CCCCh-hhHHHHhhcCcccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004141 680 T--ESPSV-EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 680 ~--~~~~~-~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
. ..+.. ........... ..+.++++|+|+++|++|..++ ..... +.+.-...+++++++ ||.....+ ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~~----~~~~~~~~~~~~~~~-gH~~~~e~-p~ 224 (242)
T 2k2q_B 153 MSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAEG----WKKWAKDITFHQFDG-GHMFLLSQ-TE 224 (242)
T ss_dssp TTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHHH----HHTTCCCSEEEEEEC-CCSHHHHH-CH
T ss_pred HHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHHH----HHHHhcCCeEEEEeC-CceeEcCC-HH
Confidence 0 00110 11111111111 1256789999999999998864 22222 333222345777775 89765433 35
Q ss_pred HHHHHHHHHHHH
Q 004141 757 ESFLNIGLWFKK 768 (771)
Q Consensus 757 ~~~~~i~~fl~~ 768 (771)
.+...+.+||++
T Consensus 225 ~~~~~i~~fl~~ 236 (242)
T 2k2q_B 225 EVAERIFAILNQ 236 (242)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhc
Confidence 778888899875
No 303
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.28 E-value=8.9e-11 Score=124.05 Aligned_cols=262 Identities=12% Similarity=0.045 Sum_probs=147.5
Q ss_pred ccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecC
Q 004141 68 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVP 142 (771)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 142 (771)
....+.+.+|+.... .....++.. ...+...+|||||+.||..... +...+|.+.... .........
T Consensus 82 ~s~Dg~v~vWd~~~~-~~~~~~~~~-----~~~v~~~~~sp~g~~lasg~~d--~~i~v~~~~~~~~~~~~~~~~~~~~h 153 (354)
T 2pbi_B 82 SSQDGKVIVWDSFTT-NKEHAVTMP-----CTWVMACAYAPSGCAIACGGLD--NKCSVYPLTFDKNENMAAKKKSVAMH 153 (354)
T ss_dssp EETTSEEEEEETTTC-CEEEEEECS-----SSCCCEEEECTTSSEEEEESTT--SEEEEEECCCCTTCCSGGGCEEEEEC
T ss_pred EeCCCeEEEEECCCC-CcceEEecC-----CCCEEEEEECCCCCEEEEeeCC--CCEEEEEEeccccccccccceeeecc
Confidence 344567777775322 122222211 1457789999999999876443 222233322110 111222111
Q ss_pred CcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC--CcCcccCCccCceE
Q 004141 143 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETYAGKRQPSL 220 (771)
Q Consensus 143 ~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~~~~~~~~l 220 (771)
. +.+..++|+||++.|+..+.+...+ .|+............+........+.+ +....+++..+..|
T Consensus 154 ~---------~~v~~~~~~~~~~~l~t~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 154 T---------NYLSACSFTNSDMQILTASGDGTCA--LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp S---------SCEEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred C---------CcEEEEEEeCCCCEEEEEeCCCcEE--EEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 1 1236889999999999887765433 343222211111111222222223333 32345556667899
Q ss_pred EEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhh
Q 004141 221 FVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 300 (771)
Q Consensus 221 ~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 300 (771)
.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 223 ~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~D~~v~lwd~------------- 269 (354)
T 2pbi_B 223 MVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDA----FASGS---------------DDATCRLYDL------------- 269 (354)
T ss_dssp EEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-------------
T ss_pred EEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC-------------
Confidence 99999988765541 334556889999999987 77665 2336778887
Q ss_pred cCCCCCCcc-eecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc
Q 004141 301 ESSSEDLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 377 (771)
Q Consensus 301 ~~~~~~~~~-~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 377 (771)
..+.. ..+... ...+....|||||+.|+..+.+ ..|.+||+.++.......+
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~l~~---------- 324 (354)
T 2pbi_B 270 ----RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-----------YTINVWDVLKGSRVSILFG---------- 324 (354)
T ss_dssp ----TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SCEEEEETTTCSEEEEECC----------
T ss_pred ----CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-----------CcEEEEECCCCceEEEEEC----------
Confidence 33332 222222 2246788999999988766654 3588999876553211000
Q ss_pred cCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 378 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 378 ~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+...+..++|+|||+.| ++.+.++...||
T Consensus 325 ---------h~~~v~~l~~spdg~~l-~sgs~D~~v~vW 353 (354)
T 2pbi_B 325 ---------HENRVSTLRVSPDGTAF-CSGSWDHTLRVW 353 (354)
T ss_dssp ---------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred ---------CCCcEEEEEECCCCCEE-EEEcCCCCEEec
Confidence 11134577899999865 556667776666
No 304
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.27 E-value=4.3e-11 Score=141.65 Aligned_cols=262 Identities=9% Similarity=0.032 Sum_probs=162.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+...+|||||++||+....+ .+.+| ..+...+.... ... +.++.|||||++|+..+.+..
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVTETP----------VRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC----------EEEEEEEGGGTEEEEEETTSE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEecCCCc----------EEEEEEeCCCCEEEEEeCCCe
Confidence 4588899999999999876543 45566 33433333332 222 269999999999999877543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-ceeeccCCCCCCccceEEEec-CCCC
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAP-LNEG 253 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-~~~~l~~~~~~~~~~~~~wsp-Dg~~ 253 (771)
.. .|+............+........|+++....+++.....|.+||+.++ ...... ......+..+.|+| |++.
T Consensus 79 i~--vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 79 IR--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EE--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-ECCSSCEEEEEEETTEEEE
T ss_pred EE--EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cCCCCcEEEEEEEcCCCCE
Confidence 22 3332222221222233444456678888666667777789999999887 333321 33445688899999 7776
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCC-CccccceeecC--CCC
Q 004141 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES-ISSAFFPRFSP--DGK 329 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~-~~~~~~p~~Sp--DG~ 329 (771)
|+..+ .+..|+++|+ .++. ...+... ...+..+.|+| ||+
T Consensus 156 ----l~~~~---------------~dg~v~vwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 156 ----FASGC---------------LDRTVKVWSL-----------------GQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp ----EEEEE---------------TTSEEEEEET-----------------TCSSCSEEEECCCTTCCCEEEECCSTTCC
T ss_pred ----EEEEe---------------CCCeEEEEEC-----------------CCCcceeEEecCCCCCEEEEEEEECCCCC
Confidence 66654 3347888887 3333 3333333 35688899999 999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee
Q 004141 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 409 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~ 409 (771)
.|+..+.+ ..|.+||+.+++.... +.. +...+..++|+|||+.|+ +...
T Consensus 200 ~l~~~~~d-----------g~i~~~d~~~~~~~~~----------~~~---------~~~~v~~~~~~~~~~~l~-~~~~ 248 (814)
T 3mkq_A 200 YMITASDD-----------LTIKIWDYQTKSCVAT----------LEG---------HMSNVSFAVFHPTLPIII-SGSE 248 (814)
T ss_dssp EEEEECTT-----------SEEEEEETTTTEEEEE----------EEC---------CSSCEEEEEECSSSSEEE-EEET
T ss_pred EEEEEeCC-----------CEEEEEECCCCcEEEE----------EcC---------CCCCEEEEEEcCCCCEEE-EEeC
Confidence 88776654 2588899876543111 100 011245678999999554 4444
Q ss_pred CCeeEEEEEECCCCcEEEec-CCCCCceeeEEeecCCEE
Q 004141 410 GSSQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNI 447 (771)
Q Consensus 410 ~~~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~dg~~l 447 (771)
++. |..+|+.+++..... .....+....++++++.+
T Consensus 249 dg~--v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 249 DGT--LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp TSC--EEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCe--EEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 554 444588777755443 333345556778887754
No 305
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.27 E-value=6.1e-10 Score=124.37 Aligned_cols=267 Identities=9% Similarity=-0.012 Sum_probs=149.5
Q ss_pred cceEEEeCC----CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCc-ccccccC-CCcccceeecCCCCeEEEEec
Q 004141 100 GASAVVPSP----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQT-VHGSVYA-DGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 100 ~~~~~~~SP----dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~wSpDg~~la~~~~ 172 (771)
.....+||| ||++|+...... .++.+++ ..++..+.+..... ..+..|. +.....+.+|||++.+++...
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~---~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWP---PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEES---SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CcceEEeCCCcCCCCCEEEEEEccC---CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 467889999 999987654322 2344444 34444444443110 0000000 112357889999987766432
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004141 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
....|+++|..+++...+..++....+..+.|+|||+
T Consensus 300 -------------------------------------------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 300 -------------------------------------------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp -------------------------------------------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred -------------------------------------------CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 2368999998776532211022233466789999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CC--cccccee-ecCCC
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SI--SSAFFPR-FSPDG 328 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~--~~~~~p~-~SpDG 328 (771)
+ ++..+. ....|.++|+ .++++..... .. ....... ++||+
T Consensus 337 ~----l~va~~--------------~~~~v~v~D~-----------------~tg~l~~~i~~g~~ph~g~g~~~~~p~~ 381 (543)
T 1nir_A 337 Y----FMTAAN--------------NSNKVAVIDS-----------------KDRRLSALVDVGKTPHPGRGANFVHPKY 381 (543)
T ss_dssp E----EEEEEG--------------GGTEEEEEET-----------------TTTEEEEEEECSSSBCCTTCEEEEETTT
T ss_pred E----EEEEec--------------CCCeEEEEEC-----------------CCCeEEEeeccCCCCCCCCCcccCCCCC
Confidence 6 655442 2236888998 6665543222 11 1112233 47887
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~ 408 (771)
..++...... ...|.++|.++.+..... ..++..+.... .....+.++|||+.|+....
T Consensus 382 g~~~~s~~~~---------d~~V~v~d~~~~~~~~~~---~~~v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 382 GPVWSTSHLG---------DGSISLIGTDPKNHPQYA---WKKVAELQGQG---------GGSLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp EEEEEEEBSS---------SSEEEEEECCTTTCTTTB---TSEEEEEECSC---------SCCCCEECCTTCCEEEECCT
T ss_pred ccEEEeccCC---------CceEEEEEeCCCCCchhc---CeEEEEEEcCC---------CCceEEEcCCCCCcEEEecC
Confidence 7665444321 245888888773321100 11222222211 12345779999998876542
Q ss_pred eC----CeeEEEEEECCCCcEE--Ee--------cCCCCCceeeEEeecCCEEEEEEe-CCCCCCeEEEEEeccc
Q 004141 409 WG----SSQVIISVNVSSGELL--RI--------TPAESNFSWSLLTLDGDNIIAVSS-SPVDVPQVKYGYFVDK 468 (771)
Q Consensus 409 ~~----~~~~l~~~d~~tg~~~--~l--------~~~~~~~~~~~~s~dg~~l~~~~~-~~~~p~~l~~~~~~~~ 468 (771)
.. ....|..+|+++++.. .| ...........|++||++++++.- .......|.++|..+.
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 11 1346778898888754 32 222233456789999999998764 3345678888886554
No 306
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.27 E-value=8.4e-11 Score=123.94 Aligned_cols=293 Identities=9% Similarity=0.014 Sum_probs=157.1
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCC---CCeEEEEecCCCCCCe
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS---GSKLLVVRNPENESPI 125 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPd---G~~la~~~~~~~~~~~ 125 (771)
.+|||..++.+.+.. ...+.+.+|++... +...+.... ....+...+|+|+ |+.|+.....+
T Consensus 26 ~~p~~~~l~~~~s~~-----~~d~~v~iw~~~~~--~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg----- 90 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFA-----RGTGVIQLYEIQHG--DLKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFGG----- 90 (357)
T ss_dssp ECTTSSEEEEEEC-------CCCEEEEEEEECSS--SEEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETTS-----
T ss_pred EcCCCceEEEecCcc-----CCCcEEEEEeCCCC--cccceeeec---ccCcEEEEEEcCCCCCCceEEEecCCC-----
Confidence 367887666554321 02467777777543 222121111 1245788999999 68887765433
Q ss_pred EEEEe--cCCc-ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCC-CCCCCccCC----C
Q 004141 126 QFELW--SQSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK-GGSSDKDCN----S 197 (771)
Q Consensus 126 ~~~~~--~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~ 197 (771)
.+.+| ..+. ........ .+.+..-.+...++|||||+.|+..+.+.... .|+..... ......... .
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGH---KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK--VWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp CEEEECTTSCSSCSEEECCC---SSCEEEEEEESGGGCC-CCCEEEEEETTSCEE--EECTTSCSSCSEEECCCTTSCCC
T ss_pred eEEEEeCCCCCccEEEEEec---ccceEEEeeccccccCCCccEEEEEeCCCeEE--EEeCCCCCCcceeccccCCCCCC
Confidence 34455 2222 33332211 11111101112236899999999887665432 23322211 111110000 0
Q ss_pred CCCccc----ccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec---CCCCCccEEEEEeecCcceee
Q 004141 198 WKGQGD----WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP---LNEGLHQYLVFVGWSSETRKL 270 (771)
Q Consensus 198 ~~~~~~----~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp---Dg~~~~~~l~~~~~~~~~~~~ 270 (771)
...... |+++....+++.....|.+||+.+++.... ......+..+.|+| +++. |+..+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~----l~~~~-------- 231 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNK----LVATS-------- 231 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCE----EEEEE--------
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCE----EEEEC--------
Confidence 111222 556655555666678999999999987666 44455788999999 8886 66654
Q ss_pred eeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-cee-----cCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004141 271 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-----LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 271 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-----lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
.+..|+++|+ .+++ ... +..+...+....|+|||+.+++....+
T Consensus 232 -------~dg~i~i~d~-----------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------ 281 (357)
T 3i2n_A 232 -------LEGKFHVFDM-----------------RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA------ 281 (357)
T ss_dssp -------STTEEEEEEE-----------------EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT------
T ss_pred -------CCCeEEEEeC-----------------cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC------
Confidence 2336777776 2222 222 225666788999999999544444332
Q ss_pred ccccccceeeecCCCCCCCCccc---------eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 345 HSATDSLHRIDWPTNGNFSSLEK---------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
..|.+||+..+........ .......+.. +...+..++|+|||+.|+++...++...+
T Consensus 282 ----g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~s~~~d~~i~i 348 (357)
T 3i2n_A 282 ----GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL---------STQPISSLDWSPDKRGLCVCSSFDQTVRV 348 (357)
T ss_dssp ----SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC---------CSSCEEEEEECSSSTTEEEEEETTSEEEE
T ss_pred ----CcEEEeecCCCcccccccCCCCccccccccceeecccc---------CCCCeeEEEEcCCCCeEEEEecCCCcEEE
Confidence 3578888776543211100 0001111100 11235578899999988767777777666
Q ss_pred EEE
Q 004141 416 ISV 418 (771)
Q Consensus 416 ~~~ 418 (771)
|.+
T Consensus 349 w~~ 351 (357)
T 3i2n_A 349 LIV 351 (357)
T ss_dssp EEE
T ss_pred EEC
Confidence 644
No 307
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.27 E-value=1.4e-10 Score=120.08 Aligned_cols=273 Identities=13% Similarity=0.061 Sum_probs=154.8
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|+... ..+.+.++++... .....+.. ....+...+|+|||++|+...... .+.
T Consensus 31 ~s~~~~~l~s~~---------~dg~i~iw~~~~~-~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~-----~i~ 90 (312)
T 4ery_A 31 FSPNGEWLASSS---------ADKLIKIWGAYDG-KFEKTISG-----HKLGISDVAWSSDSNLLVSASDDK-----TLK 90 (312)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEETTTC-CEEEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----EEE
T ss_pred ECCCCCEEEEee---------CCCeEEEEeCCCc-ccchhhcc-----CCCceEEEEEcCCCCEEEEECCCC-----EEE
Confidence 356777766543 2345666665322 11122211 124578899999999998876543 556
Q ss_pred Eec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004141 129 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+|+ .++..+.+..... ....+.|+||++.|+..+.+...+ .|+............+........|.+
T Consensus 91 vwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLIVSGSFDESVR--IWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEETTTCCEEEEEECCSS---------CEEEEEECSSSSEEEEEETTSCEE--EEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEECCCCcEEEEEcCCCC---------CEEEEEEcCCCCEEEEEeCCCcEE--EEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 663 3333333322111 125889999999998887665432 333222211111222223334566777
Q ss_pred CcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEe
Q 004141 207 DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 286 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d 286 (771)
+....+++.....|.+||+.+++............+..+.|+|||+. |+..+ .+..|.++|
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd 220 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY----ILAAT---------------LDNTLKLWD 220 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE----EEEEE---------------TTTEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEEE
Confidence 76566666777899999998887543311223345677899999997 77665 234788888
Q ss_pred cccccchhhhhhhhcCCCCCCcc-eecCCCCcc--ccceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCC
Q 004141 287 VSLYKSEASELELKESSSEDLPV-VNLTESISS--AFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 362 (771)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~--~~~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 362 (771)
+ ..++. ..+..+... .....|+ ++|+.|+..+.+ ..|.+||+.+++..
T Consensus 221 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~~ 272 (312)
T 4ery_A 221 Y-----------------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----------NLVYIWNLQTKEIV 272 (312)
T ss_dssp T-----------------TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----------SCEEEEETTTCCEE
T ss_pred C-----------------CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----------CEEEEEECCCchhh
Confidence 7 44443 334333222 2233455 567766654433 35899998876532
Q ss_pred CCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee-eCCeeEEEEE
Q 004141 363 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISV 418 (771)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~-~~~~~~l~~~ 418 (771)
....+. ...+..++|+|++..|+..+. .++...+|..
T Consensus 273 ~~~~~h-------------------~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 273 QKLQGH-------------------TDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEECCC-------------------SSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhhhcc-------------------CCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 111110 012346789999986654432 4566677754
No 308
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.9e-11 Score=130.61 Aligned_cols=293 Identities=15% Similarity=0.149 Sum_probs=163.9
Q ss_pred cceEEEeCCCCCeEEEEecCCC------CCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEe
Q 004141 100 GASAVVPSPSGSKLLVVRNPEN------ESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 171 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~ 171 (771)
.+...+|||||+.++++....+ .....+.+| ..+...+.... ... .+.+..++|||||+.|+..+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~------~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQV------DSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCC------SSCEEEEEECSSSSCEEEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-Eec------CCceEEEEECCCCCeEEEEc
Confidence 3567899999995555542221 112233344 22221111110 011 12236999999999999887
Q ss_pred cCCCCCCCCccCCCC----CCCCCCccCCCCCCcccccCC-cCcccCCccCceEEEEEccCCc------eeecc--CCCC
Q 004141 172 EEPSPSKPTFSLGST----KGGSSDKDCNSWKGQGDWEED-WGETYAGKRQPSLFVININSGE------VQAVK--GIPK 238 (771)
Q Consensus 172 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d-~g~~~~~~~~~~l~v~d~~~~~------~~~l~--~~~~ 238 (771)
.+.... .|+.... ........+........|.++ ....+++.....|++||+.+++ ..... ....
T Consensus 87 ~dg~v~--vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 87 DNGSLE--LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSSCEE--EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred cCCeEE--EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 665432 3332221 111122234445556778887 3444555667899999998876 22110 0123
Q ss_pred CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCC--
Q 004141 239 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES-- 315 (771)
Q Consensus 239 ~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~-- 315 (771)
...+..+.|+||+.. +++++. .+..|.++|+ .+++. ..+...
T Consensus 165 ~~~v~~~~~~~~~~~----~l~~~~--------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 165 VDEVISLAWNQSLAH----VFASAG--------------SSNFASIWDL-----------------KAKKEVIHLSYTSP 209 (416)
T ss_dssp SCCCCEEEECSSCTT----EEEEES--------------SSSCEEEEET-----------------TTTEEEEEECCCCC
T ss_pred CCCeeEEEeCCCCCc----EEEEEc--------------CCCCEEEEEC-----------------CCCCcceEEecccc
Confidence 446789999999665 666542 2346888887 44443 334333
Q ss_pred ----CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC-CCCcc-ceeeEEecccccCCCCCcccccC
Q 004141 316 ----ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KIVDVIPVVQCAEGDCFPGLYSS 389 (771)
Q Consensus 316 ----~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~f~g~~~~ 389 (771)
...+....|+|||+.+++....+ | ....|.+||+.++.. ..... .. ..
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d----~---~~~~i~~~d~~~~~~~~~~~~~~~-------------------~~ 263 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGS----D---NDPSILIWDLRNANTPLQTLNQGH-------------------QK 263 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECC----S---SSCCCCEEETTSTTSCSBCCCSCC-------------------SS
T ss_pred ccccCCceEEEEECCCCCCEEEEEECC----C---CCceEEEEeCCCCCCCcEEeecCc-------------------cC
Confidence 45688999999986444444332 1 123689999887532 11111 10 11
Q ss_pred CCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 390 SILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 390 ~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
.+..++|+| |++.| ++...++. |..+|+.+++... +......+....|++++..++++.+. -..+.+.++..
T Consensus 264 ~v~~~~~s~~~~~~l-~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~ 337 (416)
T 2pm9_A 264 GILSLDWCHQDEHLL-LSSGRDNT--VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTLQN 337 (416)
T ss_dssp CEEEEEECSSCSSCE-EEEESSSE--EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEESCC
T ss_pred ceeEEEeCCCCCCeE-EEEeCCCC--EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEccC
Confidence 345678999 77655 55555555 5555777776544 44444455667899998444444432 24466666654
Q ss_pred c
Q 004141 468 K 468 (771)
Q Consensus 468 ~ 468 (771)
.
T Consensus 338 ~ 338 (416)
T 2pm9_A 338 L 338 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 309
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.26 E-value=3.8e-10 Score=118.52 Aligned_cols=115 Identities=10% Similarity=0.045 Sum_probs=64.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
....++|||||+++++... ....++.++ .+++....+........ .......+.|||||++|++.........
T Consensus 44 ~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~ 117 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNTFHANLSSVPGE---VGRSMYSFAISPDGKEVYATVNPTQRLN 117 (349)
T ss_dssp SSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEESCCSTTE---EEECSSCEEECTTSSEEEEEEEEEEECS
T ss_pred CCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEEEEEEccccccc---ccccccceEECCCCCEEEEEcccccccc
Confidence 3567899999998866543 234566666 45554444443221000 0001158899999999988764311000
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCCC
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg~ 252 (771)
. .| ......|++||+.+++..... .......+..++|+|||+
T Consensus 118 ~-----------------------~~---------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 118 D-----------------------HY---------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp S-----------------------CE---------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred c-----------------------cc---------ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 0 00 012368999999886543220 012222466788999997
No 310
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.26 E-value=2.6e-10 Score=122.73 Aligned_cols=256 Identities=11% Similarity=0.059 Sum_probs=150.4
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCC-------cceEEE
Q 004141 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQS-------QLEKEF 139 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~-------~~~~~~ 139 (771)
..+.+.++++...+.....+ ..+....+.+...+|+| +++.||..+..+ .+.+| ..+ ......
T Consensus 55 ~~g~i~v~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg-----~v~vw~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVDKNV--PLVCGHTAPVLDIAWCPHNDNVIASGSEDC-----TVMVWEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp SSCCEEEEETTCCEECCTTC--CCBCCCSSCEEEEEECTTCTTEEEEEETTS-----EEEEEECCTTCCSSCBCSCSEEE
T ss_pred CCCEEEEEECccCCCCCCCC--ceEecCCCCEEEEEeCCCCCCEEEEEeCCC-----eEEEEEccCCCCccccCCceEEe
Confidence 34567777764332111111 11112235688999999 888888765443 34455 222 122222
Q ss_pred e-cCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCc
Q 004141 140 H-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 218 (771)
Q Consensus 140 ~-~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 218 (771)
. .... +..+.|+|||+.+++++. .+.
T Consensus 128 ~~h~~~----------v~~~~~~p~~~~~l~s~~-------------------------------------------~dg 154 (402)
T 2aq5_A 128 EGHTKR----------VGIVAWHPTAQNVLLSAG-------------------------------------------CDN 154 (402)
T ss_dssp ECCSSC----------EEEEEECSSBTTEEEEEE-------------------------------------------TTS
T ss_pred cCCCCe----------EEEEEECcCCCCEEEEEc-------------------------------------------CCC
Confidence 2 1222 268999999954444322 225
Q ss_pred eEEEEEccCCceeeccC-CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 219 SLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 219 ~l~v~d~~~~~~~~l~~-~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
.|.+||+.+++...... ......+..+.|+|||+. |+..+ .+..|.++|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~---------- 205 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL----ICTSC---------------RDKRVRVIEP---------- 205 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC----EEEEE---------------TTSEEEEEET----------
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE----EEEEe---------------cCCcEEEEeC----------
Confidence 79999999887655410 123446789999999998 88776 3347889998
Q ss_pred hhhcCCCCCCcc-eec-CCCCcc-ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004141 298 ELKESSSEDLPV-VNL-TESISS-AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 298 ~~~~~~~~~~~~-~~l-t~~~~~-~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
.+++. ..+ ..+.+. +....|+|||+.|+...... ....|.+||+.+++........
T Consensus 206 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--------~d~~i~iwd~~~~~~~~~~~~~------ 264 (402)
T 2aq5_A 206 -------RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM--------SERQVALWDTKHLEEPLSLQEL------ 264 (402)
T ss_dssp -------TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT--------CCEEEEEEETTBCSSCSEEEEC------
T ss_pred -------CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC--------CCceEEEEcCccccCCceEEec------
Confidence 44443 333 334333 67899999999777653211 1346999998775531110000
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEEecCC--CCCceeeEEeecCCEEE
Q 004141 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLRITPA--ESNFSWSLLTLDGDNII 448 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~l~~~--~~~~~~~~~s~dg~~l~ 448 (771)
. ....+..+.|+||++.|+++...++...+| ++.+++ +..+... ...+....|++++..++
T Consensus 265 ---~--------~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~--d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 265 ---D--------TSSGVLLPFFDPDTNIVYLCGKGDSSIRYF--EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp ---C--------CCSSCEEEEEETTTTEEEEEETTCSCEEEE--EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred ---c--------CCCceeEEEEcCCCCEEEEEEcCCCeEEEE--EecCCCcceEeecccccCCcccceEEecccccce
Confidence 0 001245678999999887776556665666 555665 5554332 23455678888887654
No 311
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.26 E-value=6e-10 Score=118.14 Aligned_cols=252 Identities=11% Similarity=0.072 Sum_probs=143.4
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCC-CccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENE-NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
.++||+.|++.. ..+.+.++++..... ....+... ...+...+|+|||+.|+..... +.-.+|
T Consensus 16 ~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~~~~~d--g~i~vw 79 (372)
T 1k8k_C 16 WNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAPDSNRIVTCGTD--RNAYVW 79 (372)
T ss_dssp ECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEETTTTEEEEEETT--SCEEEE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeCCCCEEEEEcCC--CeEEEE
Confidence 356888887652 235677777643310 12222222 2568889999999999877643 222333
Q ss_pred EEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCC
Q 004141 128 ELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 207 (771)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 207 (771)
.+ ..++........ ...+ .+..+.|+|||+.|+..+.+
T Consensus 80 d~-~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~l~~~~~d---------------------------------- 117 (372)
T 1k8k_C 80 TL-KGRTWKPTLVIL-RINR------AARCVRWAPNEKKFAVGSGS---------------------------------- 117 (372)
T ss_dssp EE-ETTEEEEEEECC-CCSS------CEEEEEECTTSSEEEEEETT----------------------------------
T ss_pred EC-CCCeeeeeEEee-cCCC------ceeEEEECCCCCEEEEEeCC----------------------------------
Confidence 33 233323332221 1111 22689999999999886432
Q ss_pred cCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004141 208 WGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 208 ~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
..|.+||+.+++ ...+. ......+..+.|+||++. |+..+ .+..|+
T Consensus 118 ----------~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~ 167 (372)
T 1k8k_C 118 ----------RVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVL----LAAGS---------------CDFKCR 167 (372)
T ss_dssp ----------SSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSE----EEEEE---------------TTSCEE
T ss_pred ----------CEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCE----EEEEc---------------CCCCEE
Confidence 467888888776 23331 233556889999999987 77655 223677
Q ss_pred EEecccccc-hhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 284 AVRVSLYKS-EASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 284 ~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
++|+..... .......+......+ ....+..+...+....|+|||+.|+..+.+ ..|.+||+.+++.
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----------STVCLADADKKMA 236 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----------TEEEEEEGGGTTE
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----------CEEEEEECCCCce
Confidence 777410000 000000000000122 334455566678899999999988877754 2588999877653
Q ss_pred CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004141 362 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
..... . ....+..++|+||++.| ++. .++...+|.++.
T Consensus 237 ~~~~~----------~---------~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 237 VATLA----------S---------ETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEE----------C---------SSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEET
T ss_pred eEEEc----------c---------CCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccC
Confidence 21110 0 00124567899999744 444 566777777664
No 312
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.26 E-value=1.1e-08 Score=108.18 Aligned_cols=258 Identities=10% Similarity=0.022 Sum_probs=142.3
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 103 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+++||||+++++.... +.....+..++ ...+....+.+..... .-....-..+.|||||++|++....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~--~~~g~~p~~~~~spDG~~l~v~n~~-- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--FDVGPYSWMNANTPNNADLLFFQFA-- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc--cccCCCccceEECCCCCEEEEEecC--
Confidence 89999999999765421 11223455565 3444444444331000 0000012478999999998876322
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCC
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~ 254 (771)
....|.++| +++++... ...+. .+...|+++.
T Consensus 146 ----------------------------------------~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~- 178 (373)
T 2mad_H 146 ----------------------------------------AGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPS- 178 (373)
T ss_pred ----------------------------------------CCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCc-
Confidence 125799999 98876433 22222 2456677776
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec------CCCCccccceeecCCC
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDG 328 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l------t~~~~~~~~p~~SpDG 328 (771)
.++..+ ....+..+++ .+...... .........|.+++|+
T Consensus 179 ---~~~~~~--------------~dg~~~~vd~-----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 179 ---TFYLLC--------------AQGGLAKTDH-----------------AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred ---eEEEEc--------------CCCCEEEEEC-----------------CCcEEEEEeccccccCCcceeecceeEecC
Confidence 554432 1224555553 11111011 1111123457889999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc-CC-CCCcccccCCCCCCccccCCCEEEEE
Q 004141 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-EG-DCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~-~~f~g~~~~~~~~~~~s~Dg~~l~~~ 406 (771)
..++|.+.. .+++++|+.++....+. . .++.... .. ...| .....+.+++|+++||+.
T Consensus 225 ~~~~~~~~~-----------~~v~vid~~~~~~~v~~-~----~~~~~~~~~~~~~~p----~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 225 GRIVWPVYS-----------GKILQADISAAGATNKA-P----IDALSGGRKADTWRP----GGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred CEEEEEcCC-----------ceEEEEeccCCcceEee-e----eeecCCcccccceec----CceEeEEECCCCCEEEEE
Confidence 998888743 26999998765432211 0 0000000 00 0011 011225689999998887
Q ss_pred eeeC-------CeeEEEEEECCCCcE-EEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 407 SIWG-------SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 407 ~~~~-------~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.... ....|+.||++++++ .+|.... ......+++||+.++++.+.. ...|.++|..+.
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~ 351 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAG 351 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCC
Confidence 6432 235799999999987 4554333 345678999999666665422 246888887654
No 313
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.25 E-value=7.3e-10 Score=115.13 Aligned_cols=230 Identities=10% Similarity=0.020 Sum_probs=140.8
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEecCCc-c-eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQSQ-L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
+.+...+|||++ +.|+..+.. +.-.+|.+..... . ..+..+. +..+. ...+.|+|||++|+..+.
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~-~h~~~------v~~~~~s~dg~~l~s~s~--- 85 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRD--KTLISWKLTGDDQKFGVPVRSFK-GHSHI------VQDCTLTADGAYALSASW--- 85 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETT--SEEEEEEEEEETTEEEEEEEEEE-CCSSC------EEEEEECTTSSEEEEEET---
T ss_pred ceEEEEEccCCCccEEEEecCC--ccEEEecCCCCCccccccceEEe-CCccc------EEEEEECCCCCEEEEEeC---
Confidence 457889999977 555544433 3223333331111 1 1111111 11111 268899999999888643
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
+..|.+||+.+++..... ......+..+.|+|+++.
T Consensus 86 -----------------------------------------D~~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~-- 121 (319)
T 3frx_A 86 -----------------------------------------DKTLRLWDVATGETYQRF-VGHKSDVMSVDIDKKASM-- 121 (319)
T ss_dssp -----------------------------------------TSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSCE--
T ss_pred -----------------------------------------CCEEEEEECCCCCeeEEE-ccCCCcEEEEEEcCCCCE--
Confidence 368999999988764431 334456888999999996
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCC------C
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDG------K 329 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG------~ 329 (771)
|+..+ .+..|.++|+ .+.....+..+...+....|+|++ .
T Consensus 122 --l~s~s---------------~D~~i~vwd~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 122 --IISGS---------------RDKTIKVWTI-----------------KGQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp --EEEEE---------------TTSCEEEEET-----------------TSCEEEEECCCSSCEEEEEECCC------CC
T ss_pred --EEEEe---------------CCCeEEEEEC-----------------CCCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 76655 3346788887 555666677777778888898854 4
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee
Q 004141 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 409 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~ 409 (771)
.|+..+.+ ..|.+||+.+.+......+ +...+..++|+|||+.| ++...
T Consensus 168 ~l~s~~~d-----------~~i~~wd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~g~~l-~s~~~ 216 (319)
T 3frx_A 168 TIISAGND-----------KMVKAWNLNQFQIEADFIG-------------------HNSNINTLTASPDGTLI-ASAGK 216 (319)
T ss_dssp EEEEEETT-----------SCEEEEETTTTEEEEEECC-------------------CCSCEEEEEECTTSSEE-EEEET
T ss_pred EEEEEeCC-----------CEEEEEECCcchhheeecC-------------------CCCcEEEEEEcCCCCEE-EEEeC
Confidence 56655544 3588888876442110000 11134567899999855 45555
Q ss_pred CCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004141 410 GSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 410 ~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
++...| +|+.+++..........+....|+|++..++...
T Consensus 217 dg~i~i--wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 217 DGEIML--WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp TCEEEE--EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE
T ss_pred CCeEEE--EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc
Confidence 555444 5887777554443444466678999998876654
No 314
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.24 E-value=7e-11 Score=121.95 Aligned_cols=233 Identities=9% Similarity=0.020 Sum_probs=140.3
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
+|||..|+-. ...+.+.+|++... .....+.... ..+...+|+|||++|+..+... .+.+
T Consensus 22 sp~~~~l~s~---------~~dg~v~lWd~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s~d~-----~i~v 81 (304)
T 2ynn_A 22 HPTEPWVLTT---------LYSGRVELWNYETQ-VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----RIRV 81 (304)
T ss_dssp CSSSSEEEEE---------ETTSEEEEEETTTT-EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----EEEE
T ss_pred CCCCCEEEEE---------cCCCcEEEEECCCC-ceeEEeeccC-----CcEEEEEEeCCCCEEEEECCCC-----EEEE
Confidence 4577666543 23456777776332 1222222221 4577889999999998776543 5666
Q ss_pred ec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCC-CCCCCccCCCCCCcccccC
Q 004141 130 WS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK-GGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 130 ~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 206 (771)
|+ .++......... + .+..++|+||++.|+..+.+...+ .|+..... .......+........|.+
T Consensus 82 wd~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~sgs~D~~v~--lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHP---D------YIRSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EETTTCCEEEEEECCS---S------CEEEEEECSSSSEEEEEETTSCEE--EEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EECCCCcEEEEEeCCC---C------cEEEEEEcCCCCEEEEECCCCeEE--EEECCCCcchhhhhcccCCcEEEEEECC
Confidence 63 333332222111 1 126899999999999887766543 33321110 0111222334444566777
Q ss_pred CcC-cccCCccCceEEEEEccCCceee-ccCCCCCCccceEEEec--CCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004141 207 DWG-ETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 207 d~g-~~~~~~~~~~l~v~d~~~~~~~~-l~~~~~~~~~~~~~wsp--Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
+.+ ..+++..+..|.+||+..+.... +. ......+....|+| |++. |+..+ .+..|
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~----l~s~s---------------~D~~i 210 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPY----MITAS---------------DDLTI 210 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCE----EEEEE---------------TTSEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCE----EEEEc---------------CCCeE
Confidence 433 45566677899999997665432 21 22334566778877 5554 55544 33478
Q ss_pred EEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 283 YAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
.++|+ .+++ ...+..+...+....|+|+++.|+..+.+. .|.+||+.+++.
T Consensus 211 ~iWd~-----------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg-----------~i~iWd~~~~~~ 262 (304)
T 2ynn_A 211 KIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSSTYKV 262 (304)
T ss_dssp EEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTTCCE
T ss_pred EEEeC-----------------CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC-----------eEEEEECCCCce
Confidence 88898 4444 455666777788999999999888777653 488999887654
No 315
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.24 E-value=5.7e-10 Score=122.12 Aligned_cols=175 Identities=13% Similarity=0.070 Sum_probs=109.7
Q ss_pred ceEEEEEcc--CCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004141 218 PSLFVININ--SGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 218 ~~l~v~d~~--~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
..|.+||+. +++.... ........+..++|+|||+. |++.+ ....|+.+++
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~---------------~~g~v~~~~~------- 178 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT----VIIAD---------------KFGDVYSIDI------- 178 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET-------
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE----EEEEe---------------CCCcEEEEec-------
Confidence 678999988 6655444 11123346778999999997 77665 2347899997
Q ss_pred hhhhhhcCCCCCCcce-----ecCCCCccccceeecCC---CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC-c
Q 004141 295 SELELKESSSEDLPVV-----NLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L 365 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~~-----~lt~~~~~~~~p~~SpD---G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~ 365 (771)
.++... .+..+...+....|||| |+.|+..+.+ ..|++||+.++..... .
T Consensus 179 ----------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 179 ----------NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----------EHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp ----------TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----------SCEEEEEESCTTCEEEEC
T ss_pred ----------CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----------CcEEEEECCCCceeeeee
Confidence 433322 44455667889999999 8888777654 2588999877654211 0
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC--------------
Q 004141 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------- 431 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-------------- 431 (771)
.+ +...+..++|+ ||+.|+ +...++ .|..+|+.+++.......
T Consensus 238 ~~-------------------h~~~v~~~~~s-d~~~l~-s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 238 FG-------------------HKHFVSSICCG-KDYLLL-SAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CC-------------------CSSCEEEEEEC-STTEEE-EEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC
T ss_pred cC-------------------CCCceEEEEEC-CCCEEE-EEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhcccc
Confidence 00 01124567899 998665 444444 456668888875443221
Q ss_pred ------------CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004141 432 ------------ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 432 ------------~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 465 (771)
...+....++++++.|++.... -..|++.++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 1123455778888877766532 245677666
No 316
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.23 E-value=7.2e-10 Score=117.52 Aligned_cols=249 Identities=8% Similarity=0.058 Sum_probs=143.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||+.||+..... .+.+| ..++...+..+. ...+ .+..+.|+|||+.|+..+.
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~l~~~~~---- 72 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNH-----EVHIYEKSGNKWVQVHELK-EHNG------QVTGVDWAPDSNRIVTCGT---- 72 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSS-----EEEEEEEETTEEEEEEEEE-CCSS------CEEEEEEETTTTEEEEEET----
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeec-CCCC------cccEEEEeCCCCEEEEEcC----
Confidence 4578899999999998764432 34444 333311222221 1111 2268999999999988643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCCCCCc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg~~~~ 255 (771)
...|.+||+.+++..... .......+..+.|+|||+.
T Consensus 73 ----------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 110 (372)
T 1k8k_C 73 ----------------------------------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK-- 110 (372)
T ss_dssp ----------------------------------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE--
T ss_pred ----------------------------------------CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE--
Confidence 257899999888743321 1334456889999999987
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc----ceec-CCCCccccceeecCCCCE
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNL-TESISSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~l-t~~~~~~~~p~~SpDG~~ 330 (771)
|+..+ .+..|.++|+ ..+. ...+ ..+...+....|+|||+.
T Consensus 111 --l~~~~---------------~d~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 111 --FAVGS---------------GSRVISICYF-----------------EQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp --EEEEE---------------TTSSEEEEEE-----------------ETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------CCCEEEEEEe-----------------cCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 77665 2235666665 2332 2233 334567889999999998
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccc--------eeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~ 402 (771)
|+..+.+. .|.+||+........... .......+. + ....+..++|+||++.
T Consensus 157 l~~~~~dg-----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 157 LAAGSCDF-----------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------S-SCGWVHGVCFSANGSR 216 (372)
T ss_dssp EEEEETTS-----------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------C-CSSCEEEEEECSSSSE
T ss_pred EEEEcCCC-----------CEEEEEcccccccccccccccccccchhhheEecC--------C-CCCeEEEEEECCCCCE
Confidence 88776543 478888653321100000 000111110 0 1113457789999986
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 403 MLLSSIWGSSQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
|+. ...++. |..+|+.+++... +......+....|+++++.++. . .+ ..+.+.++..
T Consensus 217 l~~-~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~--~d--~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAW-VSHDST--VCLADADKKMAVATLASETLPLLAVTFITESSLVAA-G--HD--CFPVLFTYDS 274 (372)
T ss_dssp EEE-EETTTE--EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE-E--TT--SSCEEEEEET
T ss_pred EEE-EeCCCE--EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEE-E--eC--CeEEEEEccC
Confidence 654 444544 5555776776543 4444445566788998875543 3 22 2345555544
No 317
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.23 E-value=1.9e-10 Score=124.43 Aligned_cols=255 Identities=11% Similarity=0.000 Sum_probs=153.6
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecC--CcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQ--SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|||||++|+..+..+ ...+|+. +...+... .+ +......|+|||++|+..+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~-----~v~i~d~~~~~~~~~~~----~~------~~~~~~~~~~~~~~l~~~~~------ 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDG-----HDFLFNTIIRDGSKMLK----RA------DYTAVDTAKLQMRRFILGTT------ 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEETT-----EEEEEECCSEETTTTSC----SC------CEEEEEEECSSSCEEEEEET------
T ss_pred ccceeeeecCCeEEEEEcCC-----cEEEEEecccceeeEEe----cC------CceEEEEEecCCCEEEEEEC------
Confidence 34579999999998876543 4445522 11111111 11 11235579999999988643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|.+||+.+++..... ......+..++|+|||+. |
T Consensus 118 --------------------------------------dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l 154 (420)
T 3vl1_A 118 --------------------------------------EGDIKVLDSNFNLQREID-QAHVSEITKLKFFPSGEA----L 154 (420)
T ss_dssp --------------------------------------TSCEEEECTTSCEEEEET-TSSSSCEEEEEECTTSSE----E
T ss_pred --------------------------------------CCCEEEEeCCCcceeeec-ccccCccEEEEECCCCCE----E
Confidence 257899999988877662 244557889999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCCEEEEEecC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
+..+ .+..|.++|+ .++ ....+..+...+....|+|||+.|+..+.+
T Consensus 155 ~s~s---------------~d~~i~iwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 155 ISSS---------------QDMQLKIWSV-----------------KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp EEEE---------------TTSEEEEEET-----------------TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEe---------------CCCeEEEEeC-----------------CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 7665 3347888998 444 456676777789999999999999877655
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccc----eeeEEecccccCC-CCCcccccCCCCCCccccCCCEEEEEeeeCCe
Q 004141 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEK----IVDVIPVVQCAEG-DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 412 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~-~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~ 412 (771)
. .|.+||+.+++....... ...+..+...+.. ..........+..++|+|||+.|+ +...++.
T Consensus 203 ~-----------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~ 270 (420)
T 3vl1_A 203 G-----------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSGV 270 (420)
T ss_dssp S-----------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTSC
T ss_pred C-----------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCCe
Confidence 3 488889877654221110 0000000000000 000001123456889999998664 4444554
Q ss_pred eEEEEEECCCCcEEEec-C-CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 413 QVIISVNVSSGELLRIT-P-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 413 ~~l~~~d~~tg~~~~l~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
|..+|+.+++..... . ....+....|+++++.++++.+.. ..+.+.++.++
T Consensus 271 --i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~ 323 (420)
T 3vl1_A 271 --ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSP 323 (420)
T ss_dssp --EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCT
T ss_pred --EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCC
Confidence 455577777644333 2 223456678899998444444322 45777776543
No 318
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.23 E-value=4.6e-10 Score=117.96 Aligned_cols=276 Identities=11% Similarity=0.025 Sum_probs=156.5
Q ss_pred ccceEEEe-----CC-CCCeEEEEecCCCCCCeEEEEecCCc---c-eEEEecCCcccccccCCCcccceeecCCCCeEE
Q 004141 99 TGASAVVP-----SP-SGSKLLVVRNPENESPIQFELWSQSQ---L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIA 168 (771)
Q Consensus 99 ~~~~~~~~-----SP-dG~~la~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la 168 (771)
..+...+| +| ||+.||..+.. +.-.+|.+..... . .....+ .+..+ .+..++|+||++.|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D--~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~------~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRD--KTVMIWKLYEEEQNGYFGIPHKAL-TGHNH------FVSDLALSQENCFAI 92 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETT--SCEEEEEECSSCCSSBSEEEEEEE-CCCSS------CEEEEEECSSTTEEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCC--CEEEEEECCcCCcccccccccchh-ccCCC------ceEEEEECCCCCEEE
Confidence 34677778 77 99988876553 3333333331110 1 111111 11111 226899999999998
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC-CCCCCccceEEE
Q 004141 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVW 247 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~-~~~~~~~~~~~w 247 (771)
..+.+...+ .|+............+........|+++....+++.....|.+||+.+.....+.. ......+..+.|
T Consensus 93 s~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 93 SSSWDKTLR--LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEETTSEEE--EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEcCCCcEE--EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 877665433 34432222222223344445567788887667777778899999998655444410 123345778899
Q ss_pred ecCCCCC------ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccc
Q 004141 248 APLNEGL------HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 321 (771)
Q Consensus 248 spDg~~~------~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 321 (771)
+|+++.. .++|+..+ .+..|.++|. .......+..+...+..
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVG---------------WDGRLKVWNT-----------------NFQIRYTFKAHESNVNH 218 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEE---------------TTSEEEEEET-----------------TTEEEEEEECCSSCEEE
T ss_pred ccccccccccCCCCCEEEEEc---------------CCCEEEEEcC-----------------CCceeEEEcCccccceE
Confidence 9998420 00144433 2346777775 44444555666677889
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~ 401 (771)
.+|||||++|+..+.+. .|.+||+............ ...+..++|+||++
T Consensus 219 ~~~s~~g~~l~sgs~dg-----------~v~iwd~~~~~~~~~~~~~-------------------~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDK-----------KLLIWDILNLTYPQREFDA-------------------GSTINQIAFNPKLQ 268 (343)
T ss_dssp EEECTTSSEEEEEETTC-----------EEEEEESSCCSSCSEEEEC-------------------SSCEEEEEECSSSC
T ss_pred EEECCCCCEEEEEcCCC-----------eEEEEECCCCcccceeecC-------------------CCcEEEEEECCCCC
Confidence 99999999998777553 5888888433221100000 01245678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEE---EecC-----------CCCCceeeEEeecCCEEEEEE
Q 004141 402 TMLLSSIWGSSQVIISVNVSSGELL---RITP-----------AESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~~~---~l~~-----------~~~~~~~~~~s~dg~~l~~~~ 451 (771)
.|. .. .++...| +++.+++.. .+.. ....+....|+|+|+.|+...
T Consensus 269 ~la-~~-~d~~v~i--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 269 WVA-VG-TDQGVKI--FNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EEE-EE-ESSCEEE--EESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred EEE-EE-CCCCEEE--EEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 554 33 3444444 466665432 2221 112234567889998776554
No 319
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.3e-09 Score=113.73 Aligned_cols=244 Identities=12% Similarity=0.105 Sum_probs=146.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~ 176 (771)
..+...+|||||++||..... +.-.+|.+. .+....+..+. ...+. +.+++|+|+ ++.|+..+.+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~-~~~~~~~~~~~-~h~~~------v~~~~~~~~~~~~~l~s~~~d--- 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSD--KTIKIFEVE-GETHKLIDTLT-GHEGP------VWRVDWAHPKFGTILASCSYD--- 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETT--SCEEEEEEE-TTEEEEEEEEC-CCSSC------EEEEEECCGGGCSEEEEEETT---
T ss_pred ccEEEEEEcCCCCEEEEEECC--CcEEEEecC-CCcceeeeEec-CCCCc------EEEEEeCCCCCCCEEEEeccC---
Confidence 458889999999999877543 222333332 12222222221 11112 268999988 8888776432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC--C
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL--N 251 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD--g 251 (771)
..|.+||+.+++. ..+ ......+..+.|+|+ +
T Consensus 79 -----------------------------------------g~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 79 -----------------------------------------GKVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHEYG 115 (379)
T ss_dssp -----------------------------------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGC
T ss_pred -----------------------------------------CEEEEEEcCCCceeEeeee--cCCCcceEEEEeCCCCCC
Confidence 5789999998863 333 334557889999999 7
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC--
Q 004141 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP-- 326 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp-- 326 (771)
+. |+..+ .+..|.++|+ ..+ ....+..+...+..+.|+|
T Consensus 116 ~~----l~~~~---------------~d~~i~v~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 116 PL----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp SE----EEEEE---------------TTSEEEEEEC-----------------CTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred CE----EEEec---------------CCCcEEEEec-----------------CCCCceeeEEecCCCCceEEEEEcCcc
Confidence 76 66655 3347888887 333 2334455666788999999
Q ss_pred -----------CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc
Q 004141 327 -----------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 395 (771)
Q Consensus 327 -----------DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 395 (771)
||+.|+..+.+. .|.+||+.++.... .....+.. +...+..++
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~------~~~~~~~~---------h~~~v~~~~ 213 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVA 213 (379)
T ss_dssp ----------CTTCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCC-----------eEEEEEecCCCcce------eeEEEEec---------ccCcEeEEE
Confidence 789888777553 48888887654311 01111100 111345778
Q ss_pred cccCC--CEEEEEeeeCCeeEEEEEECCCCc---EEEecC---CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 396 WLSDG--CTMLLSSIWGSSQVIISVNVSSGE---LLRITP---AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 396 ~s~Dg--~~l~~~~~~~~~~~l~~~d~~tg~---~~~l~~---~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
|+||+ ..++++...++...+|.+ .+++ ...+.. ....+....|+++++.|+....+ ..+++.++.
T Consensus 214 ~sp~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----g~i~iw~~~ 286 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD----NKVTLWKEN 286 (379)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEE--SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS----SSEEEEEEE
T ss_pred ECCCCCCCCeEEEEeCCCEEEEEeC--CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC----CcEEEEeCC
Confidence 99993 345566666776666654 4542 233322 22345567899999977766542 235555544
No 320
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.22 E-value=5.6e-10 Score=129.43 Aligned_cols=279 Identities=13% Similarity=0.109 Sum_probs=156.3
Q ss_pred cccceeEEEEEEeecCCCCc----cceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEe
Q 004141 67 ANKRKKFMLSTVISKENENS----VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFH 140 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~----~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~ 140 (771)
+....+.+.+|++....... ..++. ....+...+|||||++|+..+... .+.+|+ .+...+...
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~ 469 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTG-----HSHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAAGVSTRRFV 469 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE
T ss_pred EEeCCCcEEEEEccCCCcccccccceecC-----CCCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcceeEEe
Confidence 33445677777775433211 12222 225678899999999998776543 566773 333322222
Q ss_pred -cCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCC---CCCCccCCCCCCcccccCCcC--cccCC
Q 004141 141 -VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG---GSSDKDCNSWKGQGDWEEDWG--ETYAG 214 (771)
Q Consensus 141 -~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~g--~~~~~ 214 (771)
....+ .+++|||||+.|+..+.+...+ .|+...... ......+..+.....|+++.. ..+++
T Consensus 470 ~h~~~v----------~~~~~s~~~~~l~s~s~D~~i~--iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 470 GHTKDV----------LSVAFSLDNRQIVSASRDRTIK--LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp CCSSCE----------EEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCCCCE----------EEEEEeCCCCEEEEEeCCCEEE--EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 12222 6899999999999888766543 333211000 011112333444556777642 24455
Q ss_pred ccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004141 215 KRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 215 ~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
.....|.+||+.+++..... ......+..++|||||+. |+..+ .+..|.++|+
T Consensus 538 s~d~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~----l~sg~---------------~Dg~i~iwd~------- 590 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSL----CASGG---------------KDGVVLLWDL------- 590 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSBCEEEET-------
T ss_pred eCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC-------
Confidence 66789999999988765541 334556889999999997 77655 3347888887
Q ss_pred hhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc-eeeEEe
Q 004141 295 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK-IVDVIP 373 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~ 373 (771)
.+++..........+....|||||..|+... + ..|.+||+.++........ ......
T Consensus 591 ----------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~-----------~~i~iwd~~~~~~~~~~~~~~~~~~~ 648 (694)
T 3dm0_A 591 ----------AEGKKLYSLEANSVIHALCFSPNRYWLCAAT-E-----------HGIKIWDLESKSIVEDLKVDLKAEAE 648 (694)
T ss_dssp ----------TTTEEEECCBCSSCEEEEEECSSSSEEEEEE-T-----------TEEEEEETTTTEEEEEECCCCC----
T ss_pred ----------CCCceEEEecCCCcEEEEEEcCCCcEEEEEc-C-----------CCEEEEECCCCCChhhhccccccccc
Confidence 5554433333445678899999998776543 2 2388999887653211000 000000
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
............ .......++|||||+.| ++.+.++...||.+
T Consensus 649 ~~~~~~~~~~~~-~~~~~~~l~~spdg~~l-~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 649 KADNSGPAATKR-KVIYCTSLNWSADGSTL-FSGYTDGVIRVWGI 691 (694)
T ss_dssp -------------CCCCEEEEEECTTSSEE-EEEETTSEEEEEEC
T ss_pred cccccccccCCc-eeEEeeeEEEcCCCCEE-EEEcCCCeEEEEec
Confidence 000000000000 00012356899999966 56666777777754
No 321
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.21 E-value=8.1e-11 Score=125.42 Aligned_cols=210 Identities=13% Similarity=0.084 Sum_probs=114.7
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
++||+.|+... ..+.+.++++.... .....+ ......+...+|||||++|+..+... .+.
T Consensus 20 s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~ 80 (377)
T 3dwl_C 20 NSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTF-----SDHDKIVTCVDWAPKSNRIVTCSQDR-----NAY 80 (377)
T ss_dssp CSSSSEEECCC---------SSSCBCEEEEETTEEEECCCB-----CCCSSCEEEEEECTTTCCEEEEETTS-----SEE
T ss_pred CCCCCEEEEec---------CCCEEEEEEccCCceEEEEEE-----ecCCceEEEEEEeCCCCEEEEEeCCC-----eEE
Confidence 56888776542 23455666664321 111222 22235688999999999998876543 344
Q ss_pred Eec--CCc-ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004141 129 LWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 129 ~~~--~~~-~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
+|+ .+. ........ ...+ .+..+.|+|||+.|+..+.+
T Consensus 81 vwd~~~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~l~~~~~d-------------------------------- 121 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLL-RLNR------AATFVRWSPNEDKFAVGSGA-------------------------------- 121 (377)
T ss_dssp EC------CCCCEEECC-CCSS------CEEEEECCTTSSCCEEEESS--------------------------------
T ss_pred EEEcCCCCceeeeeEec-ccCC------ceEEEEECCCCCEEEEEecC--------------------------------
Confidence 552 222 11222211 1111 23689999999999886533
Q ss_pred CCcCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce
Q 004141 206 EDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 281 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 281 (771)
..|.+||+.+++ .+.+. .+....+..++|+|||+. |+..+. +..
T Consensus 122 ------------~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~~~~~---------------d~~ 169 (377)
T 3dwl_C 122 ------------RVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVL----LAAGCA---------------DRK 169 (377)
T ss_dssp ------------SCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSE----EEEEES---------------SSC
T ss_pred ------------CeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCE----EEEEeC---------------CCE
Confidence 468888888776 44552 124567889999999997 777652 235
Q ss_pred eEEEecccccc-hhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 282 LYAVRVSLYKS-EASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 282 l~~~d~~~~~~-~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
|.++|+..... .......+......++ ...+ .+...+....|||||+.|+..+.+. .|.+||+.++
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----------~i~iwd~~~~ 237 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----------SVTIAYPSAP 237 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----------EEC-CEECST
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----------cEEEEECCCC
Confidence 66666510000 0000000000000122 2223 5556688999999999998877553 4888888876
Q ss_pred CC
Q 004141 360 GN 361 (771)
Q Consensus 360 ~~ 361 (771)
+.
T Consensus 238 ~~ 239 (377)
T 3dwl_C 238 EQ 239 (377)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 322
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.21 E-value=7.5e-09 Score=109.17 Aligned_cols=289 Identities=11% Similarity=0.026 Sum_probs=155.7
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCC----CCeEEEEecCCCCCCeE
Q 004141 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS----GSKLLVVRNPENESPIQ 126 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPd----G~~la~~~~~~~~~~~~ 126 (771)
+|+....++.... ..+.+|++.... ....+.....+.....+...+|||+ |+.|+.....+ .
T Consensus 31 ~~~~~~~~~~~~~--------~~v~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~ 96 (366)
T 3k26_A 31 KEGDPLVFATVGS--------NRVTLYECHSQG-EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----I 96 (366)
T ss_dssp CTTSCEEEEEEET--------TEEEEEEECGGG-CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----E
T ss_pred CCCCceEEEECCC--------CEEEEEEcCCCc-EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----E
Confidence 3466555554432 256666664332 2222221111112245788999999 66777665443 5
Q ss_pred EEEe--cCCcceEEEec-CCcccccccCCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004141 127 FELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
+.+| ..++....+.. ... +..+.|+| |++.|+..+.
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~l~s~~~------------------------------ 136 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNA----------INELKFHPRDPNLLLSVSK------------------------------ 136 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSC----------EEEEEECSSCTTEEEEEET------------------------------
T ss_pred EEEEEchhceEeeeecCCCCc----------EEEEEECCCCCCEEEEEeC------------------------------
Confidence 5566 33443333331 222 26899999 8888877543
Q ss_pred cccCCcCcccCCccCceEEEEEccCCceeeccC--CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004141 203 DWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~--~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
...|.+||+.+++...... ......+..+.|+|||+. |+..+ .+.
T Consensus 137 --------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~---------------~dg 183 (366)
T 3k26_A 137 --------------DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEK----IMSCG---------------MDH 183 (366)
T ss_dssp --------------TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSE----EEEEE---------------TTS
T ss_pred --------------CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCE----EEEec---------------CCC
Confidence 2579999999887655510 134457889999999997 77665 233
Q ss_pred eeEEEecccccchhhhhhhhcC-CCCC------------CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccc
Q 004141 281 ALYAVRVSLYKSEASELELKES-SSED------------LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 347 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~-~~~~------------~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~ 347 (771)
.|.++|+...... ..+..... ..+. .....+..+...+....|+ |+.|+..+.+
T Consensus 184 ~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---------- 250 (366)
T 3k26_A 184 SLKLWRINSKRMM-NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE---------- 250 (366)
T ss_dssp CEEEEESCSHHHH-HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS----------
T ss_pred CEEEEECCCCccc-cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC----------
Confidence 6788887321100 00000000 0000 0011111245567788888 6777665544
Q ss_pred cccceeeecCCCCCCC--Ccccee--eEEecccccCCCCCcccccCCCCCCccccC--CCEEEEEeeeCCeeEEEEEECC
Q 004141 348 TDSLHRIDWPTNGNFS--SLEKIV--DVIPVVQCAEGDCFPGLYSSSILSNPWLSD--GCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 348 ~~~l~~~d~~~~~~~~--~~~~~~--~~~~~~~~~~~~~f~g~~~~~~~~~~~s~D--g~~l~~~~~~~~~~~l~~~d~~ 421 (771)
..|.+||+.++.... +..... ........ +...+..++|+|| ++.|+ +...++. |..+|+.
T Consensus 251 -~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~~l~-~~~~dg~--i~vwd~~ 317 (366)
T 3k26_A 251 -NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---------SQCDIWYMRFSMDFWQKMLA-LGNQVGK--LYVWDLE 317 (366)
T ss_dssp -SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---------SSCCSSCCCCEECTTSSEEE-EECTTSC--EEEEECC
T ss_pred -CEEEEEeCCCccccccccccCCcchheeccccc---------cCCcEEEEEEcCCCCCcEEE-EEecCCc--EEEEECC
Confidence 358888887654311 100000 11111110 1124567899999 88654 4444554 4455676
Q ss_pred CCc-----EEEecCC--CCCceeeEEeecCCEEEEEEe
Q 004141 422 SGE-----LLRITPA--ESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 422 tg~-----~~~l~~~--~~~~~~~~~s~dg~~l~~~~~ 452 (771)
+++ ...+... ...+....|+++++.|+....
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 318 VEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp SSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 664 2244443 345666789999988776553
No 323
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.21 E-value=1.3e-09 Score=111.93 Aligned_cols=234 Identities=12% Similarity=0.167 Sum_probs=137.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC-C--cceEEEecCCcccccccCCCcccceeecCC--CCeEEEEec
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-S--QLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~ 172 (771)
..+...+|||||++||..+... ...+| .. + +....+. +..+. +..++|+|+ |+.|+..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~---gH~~~------V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDK-----TIKIFEVEGETHKLIDTLT---GHEGP------VWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEEC---CCSSC------EEEEEECCGGGCSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEc---cccCC------eEEEEecCCCcCCEEEEEcC
Confidence 4578899999999998776543 34455 22 1 2222222 11112 268999874 888877643
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecC-
Q 004141 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspD- 250 (771)
+ ..|.+||+.+++...+. -......+..+.|+|+
T Consensus 76 D--------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 76 D--------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp T--------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred C--------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 3 57899999887532221 0233456889999998
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC
Q 004141 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP 326 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp 326 (771)
|+. |+..+ .+..|.++|+ ..+ ....+..+...+.+..|+|
T Consensus 112 ~g~~----l~s~s---------------~d~~v~~wd~-----------------~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 112 YGPM----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEB-----------------CSSSCBCCEEEECCSSCEEEEEECC
T ss_pred CCcE----EEEEE---------------CCCcEEEEEe-----------------cCCCceeeeeeecccCccceEeecC
Confidence 665 66554 2336777887 322 1234445566788899999
Q ss_pred C-------------CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004141 327 D-------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 327 D-------------G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
+ ++.|+..+.+. .|.+||+.++.... .....+. + +...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~-----------~v~lwd~~~~~~~~------~~~~~l~--------~-H~~~V~~ 209 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLE--------G-HSDWVRD 209 (297)
T ss_dssp CC------------CCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEEC--------C-CSSCEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCC-----------cEEEEEEcCCCceE------EEEEEec--------C-CCCceEE
Confidence 7 46676666543 47788876644210 0000010 0 1123557
Q ss_pred CccccCC--CEEEEEeeeCCeeEEEEEECCCCc-EEEec---CCCCCceeeEEeecCCEEEEEEe
Q 004141 394 NPWLSDG--CTMLLSSIWGSSQVIISVNVSSGE-LLRIT---PAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 394 ~~~s~Dg--~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~---~~~~~~~~~~~s~dg~~l~~~~~ 452 (771)
++|+||+ ..++++.+.++...||.++...+. ...+. .....+....|+++++.|+....
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 8899996 456677777888888866532222 22222 11223455688999987765553
No 324
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.20 E-value=2.5e-10 Score=122.38 Aligned_cols=293 Identities=10% Similarity=0.013 Sum_probs=159.1
Q ss_pred cccceeEEEEEEeecCCC-----CccceeecCCccccccceEEEeCCC----C---CeEEEEecCCCCCCeEEEEecCCc
Q 004141 67 ANKRKKFMLSTVISKENE-----NSVTFQWAPFPVEMTGASAVVPSPS----G---SKLLVVRNPENESPIQFELWSQSQ 134 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~-----~~~~lt~~~~~~~~~~~~~~~~SPd----G---~~la~~~~~~~~~~~~~~~~~~~~ 134 (771)
.....+.+.+|++..... ....+.. ....+...+|+|+ | +.|+..... +.-.+|.+..+..
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d--g~i~iw~~~~~~~ 103 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFV-----HKSGLHHVDVLQAIERDAFELCLVATTSFS--GDLLFYRITREDE 103 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEEC-----CTTCEEEEEEEEEEETTTEEEEEEEEEETT--SCEEEEEEEECTT
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEec-----CCCcEEEEEEecccccCCccccEEEEEcCC--CCEEEEEccCCcc
Confidence 334456788877754431 1122221 2245788999999 9 888876543 3333444333222
Q ss_pred c----eEEEecCCcccccccCCCcccceeec----CCCCe-EEEEecCCCCCCCCccCCC------CCCCC-----CC--
Q 004141 135 L----EKEFHVPQTVHGSVYADGWFEGISWN----SDETL-IAYVAEEPSPSKPTFSLGS------TKGGS-----SD-- 192 (771)
Q Consensus 135 ~----~~~~~~~~~~~g~~~~~~~~~~~~wS----pDg~~-la~~~~~~~~~~~~~~~~~------~~~~~-----~~-- 192 (771)
. .+....... + ..++.+..+.|+ |||+. |+..+.+.... .|+... ..... ..
T Consensus 104 ~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~ 177 (397)
T 1sq9_A 104 TKKVIFEKLDLLDS-D---MKKHSFWALKWGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLTLNWSPTLELQG 177 (397)
T ss_dssp TCCEEEEEECCSCT-T---GGGSCEEEEEEECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTTTCCCCEEEEEE
T ss_pred cccccceeeccccc-c---cCCCcEEEEEEeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccceeeccCcceeee
Confidence 1 222221100 0 001123689999 99999 87776654322 233221 11111 11
Q ss_pred -----ccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-------CCccceEEEecCCCCCccEEEE
Q 004141 193 -----KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-------SLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 193 -----~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-------~~~~~~~~wspDg~~~~~~l~~ 260 (771)
..+........|.++. ..+++.....|.+||+.+++.... ... ...+..+.|+|||+. |+.
T Consensus 178 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~h~~~~~~i~~i~~~~~~~~----l~~ 250 (397)
T 1sq9_A 178 TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN--FESQHSMINNSNSIRSVKFSPQGSL----LAI 250 (397)
T ss_dssp EECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE--EECCC---CCCCCEEEEEECSSTTE----EEE
T ss_pred eeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE--EeccccccccCCccceEEECCCCCE----EEE
Confidence 1234444567788886 666777788999999998876554 222 557889999999997 776
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCC-------------CCccccceeecC
Q 004141 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE-------------SISSAFFPRFSP 326 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~-------------~~~~~~~p~~Sp 326 (771)
.+... ....|.++|+ .+++ ...+.. +...+....|+|
T Consensus 251 ~~~d~------------~~g~i~i~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 301 (397)
T 1sq9_A 251 AHDSN------------SFGCITLYET-----------------EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 301 (397)
T ss_dssp EEEET------------TEEEEEEEET-----------------TTCCEEEEECBC--------CCBSBSSCEEEEEECS
T ss_pred EecCC------------CCceEEEEEC-----------------CCCcccceeccCcccccccccccccCCcEEEEEECC
Confidence 55210 0136888887 4443 344444 556788999999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce-eeEEecccccCC-CCCcccccCCCCCCccccCCC---
Q 004141 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI-VDVIPVVQCAEG-DCFPGLYSSSILSNPWLSDGC--- 401 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~-~~f~g~~~~~~~~~~~s~Dg~--- 401 (771)
||+.|+..+.+ ..|.+||+.+++........ ............ ......+...+..++|+|||+
T Consensus 302 ~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 302 SGETLCSAGWD-----------GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SSSEEEEEETT-----------SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CCCEEEEEeCC-----------CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 99998876654 35889998776532111000 000000000000 000000123456789999984
Q ss_pred ------EEEEEeeeCCeeEEEEEE
Q 004141 402 ------TMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 402 ------~l~~~~~~~~~~~l~~~d 419 (771)
.++++...++...+|.++
T Consensus 371 ~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 371 MGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccccccceEEEecCCCcEEEEEcC
Confidence 356666677777777554
No 325
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=2.4e-09 Score=122.00 Aligned_cols=277 Identities=12% Similarity=0.123 Sum_probs=161.5
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCC---CCccceeecCCcccccc-ceEEEeCC--CCCeEEEEecCCCCC
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN---ENSVTFQWAPFPVEMTG-ASAVVPSP--SGSKLLVVRNPENES 123 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lt~~~~~~~~~~-~~~~~~SP--dG~~la~~~~~~~~~ 123 (771)
++||+.|++..+ +.+.++++.... .....+.. .... +...+||| ||++||.....+
T Consensus 27 spdg~~l~~~~~----------~~v~v~~~~~~~~~~~~~~~~~~-----h~~~~v~~~~~sp~~~~~~l~s~~~dg--- 88 (615)
T 1pgu_A 27 DPTTNAIAYPCG----------KSAFVRCLDDGDSKVPPVVQFTG-----HGSSVVTTVKFSPIKGSQYLCSGDESG--- 88 (615)
T ss_dssp ETTTTEEEEEET----------TEEEEEECCSSCCSSCSEEEECT-----TTTSCEEEEEECSSTTCCEEEEEETTS---
T ss_pred CCCCCEEEEecC----------CeEEEEECCCCCCccccceEEec-----CCCceEEEEEECcCCCCCEEEEecCCC---
Confidence 579999998751 256666665331 12222322 2255 78999999 999998876532
Q ss_pred CeEEEEec--CC------cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004141 124 PIQFELWS--QS------QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 124 ~~~~~~~~--~~------~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
.+.+|+ .+ ....+.... ... +.+..+.|||||+.|+.......
T Consensus 89 --~v~vw~~~~~~~~~~~~~~~~~~~~-~~~------~~v~~~~~s~~~~~l~~~~~~~~-------------------- 139 (615)
T 1pgu_A 89 --KVIVWGWTFDKESNSVEVNVKSEFQ-VLA------GPISDISWDFEGRRLCVVGEGRD-------------------- 139 (615)
T ss_dssp --EEEEEEEEEEGGGTEEEEEEEEEEE-CCS------SCEEEEEECTTSSEEEEEECCSS--------------------
T ss_pred --EEEEEeCCCCcccccccccccchhh-ccc------ccEEEEEEeCCCCEEEEeccCCC--------------------
Confidence 344441 22 112222211 111 12369999999999998764421
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004141 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
....|++|| .+.....+ ......+..+.|+||++. +++++.
T Consensus 140 --------------------~~~~v~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~----~l~~~~------------ 180 (615)
T 1pgu_A 140 --------------------NFGVFISWD-SGNSLGEV--SGHSQRINACHLKQSRPM----RSMTVG------------ 180 (615)
T ss_dssp --------------------CSEEEEETT-TCCEEEEC--CSCSSCEEEEEECSSSSC----EEEEEE------------
T ss_pred --------------------CccEEEEEE-CCCcceee--ecCCccEEEEEECCCCCc----EEEEEe------------
Confidence 225778887 33344445 344557888999999996 555552
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCc---cccceeecCC-CCEEEEEecCCCCCCCCcccccc
Q 004141 276 YNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESIS---SAFFPRFSPD-GKFLVFLSAKSSVDSGAHSATDS 350 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~---~~~~p~~SpD-G~~l~f~~~~~~~~~g~~~~~~~ 350 (771)
.+..|.++|+ .+++ ...+..+.. .+....|+|| |+.|+..+.+. .
T Consensus 181 --~d~~v~vwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----------~ 230 (615)
T 1pgu_A 181 --DDGSVVFYQG-----------------PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----------K 230 (615)
T ss_dssp --TTTEEEEEET-----------------TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----------C
T ss_pred --CCCcEEEEeC-----------------CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC-----------e
Confidence 3347888887 4443 445555666 7889999999 99888776553 5
Q ss_pred ceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004141 351 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 351 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
|.+||+.+++...... ... . .....+..+.|+ |++.|+ +...++. |..+|+.+++......
T Consensus 231 i~vwd~~~~~~~~~~~---------~~~-~-----~~~~~v~~~~~~-~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIE---------DDQ-E-----PVQGGIFALSWL-DSQKFA-TVGADAT--IRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEEEETTTCCEEEECC---------BTT-B-----CCCSCEEEEEES-SSSEEE-EEETTSE--EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCEeEEec---------ccc-c-----ccCCceEEEEEc-CCCEEE-EEcCCCc--EEEEECCCCcEEEEEc
Confidence 8999987765422110 000 0 011134567899 888664 4444444 5555887777554432
Q ss_pred CC-----CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 431 AE-----SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 431 ~~-----~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
.. .......+ ++++.++....+ ..+++.++.
T Consensus 292 ~~~~~~~~~~~~~~~-~~~~~l~~~~~~----g~i~~~d~~ 327 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVA-TGNGRIISLSLD----GTLNFYELG 327 (615)
T ss_dssp CCTTCGGGCEEEEEE-EETTEEEEEETT----SCEEEEETT
T ss_pred CCCCcccCceeEEEe-CCCCeEEEEECC----CCEEEEECC
Confidence 22 11222333 377777665532 345555544
No 326
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.20 E-value=8e-09 Score=108.40 Aligned_cols=164 Identities=9% Similarity=-0.008 Sum_probs=107.3
Q ss_pred ccceeecC--CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceee
Q 004141 155 FEGISWNS--DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA 232 (771)
Q Consensus 155 ~~~~~wSp--Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~ 232 (771)
+..++|+| +|+.|+..+.+ ..|.+||+.+++...
T Consensus 128 v~~~~~~~~~~~~~l~s~s~d--------------------------------------------g~i~~wd~~~~~~~~ 163 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNR--------------------------------------------GTIGFQSYEDDSQYI 163 (343)
T ss_dssp EEEEECCC---CCEEEEEETT--------------------------------------------CCEEEEESSSSCEEE
T ss_pred EEEEEcCCCCCCCEEEEEeCC--------------------------------------------CcEEEEECCCCcEEE
Confidence 36899999 99988876432 578999999988765
Q ss_pred ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--e
Q 004141 233 VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--V 310 (771)
Q Consensus 233 l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~ 310 (771)
+........+..++|+|||+. |+..+ .+..|.++|+ .+++. .
T Consensus 164 ~~~~~~~~~i~~~~~~pdg~~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~ 207 (343)
T 3lrv_A 164 VHSAKSDVEYSSGVLHKDSLL----LALYS---------------PDGILDVYNL-----------------SSPDQASS 207 (343)
T ss_dssp EECCCSSCCCCEEEECTTSCE----EEEEC---------------TTSCEEEEES-----------------SCTTSCCE
T ss_pred EEecCCCCceEEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCCCCcc
Confidence 521223335788999999986 66544 3347888898 55543 3
Q ss_pred ecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccC
Q 004141 311 NLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 389 (771)
Q Consensus 311 ~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~ 389 (771)
.+.. +...+....|||||+.|+..+ ++ .|.+||+.+++......... ...+
T Consensus 208 ~~~~~h~~~v~~l~fs~~g~~l~s~~-~~-----------~v~iwd~~~~~~~~~~~~~~----------~~~~------ 259 (343)
T 3lrv_A 208 RFPVDEEAKIKEVKFADNGYWMVVEC-DQ-----------TVVCFDLRKDVGTLAYPTYT----------IPEF------ 259 (343)
T ss_dssp ECCCCTTSCEEEEEECTTSSEEEEEE-SS-----------BEEEEETTSSTTCBSSCCCB----------C---------
T ss_pred EEeccCCCCEEEEEEeCCCCEEEEEe-CC-----------eEEEEEcCCCCcceeecccc----------cccc------
Confidence 5655 667899999999999988777 21 48999998765422111100 0000
Q ss_pred CCC--CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 004141 390 SIL--SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 426 (771)
Q Consensus 390 ~~~--~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 426 (771)
... .++|+|+|++|+..+..++...+|.++.......
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 112 3789999997765444367778887764444333
No 327
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.19 E-value=3.1e-09 Score=115.63 Aligned_cols=206 Identities=10% Similarity=0.076 Sum_probs=128.5
Q ss_pred ccceEEEeCCC-CCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCC
Q 004141 99 TGASAVVPSPS-GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPd-G~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 174 (771)
..+...+|+|+ ++.||..+..+ .+.+|+ .++...+... .+..+.| .+++|+| |++.|+..+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-~gH~~~V------~~l~f~p~~~~~l~s~s~-- 185 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-IGAGGSI------TGLKFNPLNTNQFYASSM-- 185 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC-CSSSCCC------CEEEECSSCTTEEEEECS--
T ss_pred CCEEEEEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-cCCCCCE------EEEEEeCCCCCEEEEEeC--
Confidence 34788999995 55676654433 455662 3333333332 1222223 7999998 6777776532
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC-CCCCCccceEEEecCCCC
Q 004141 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~-~~~~~~~~~~~wspDg~~ 253 (771)
+..|.+||+.++..+.+.. ......+..+.|+|||+.
T Consensus 186 ------------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (435)
T 4e54_B 186 ------------------------------------------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM 223 (435)
T ss_dssp ------------------------------------------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred ------------------------------------------CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence 2578899998887666521 112334668899999996
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEE
Q 004141 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f 333 (771)
|+..+ ....|+++|+ .+.....+..+...+.+..|+|+++.++.
T Consensus 224 ----l~~g~---------------~dg~i~~wd~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 224 ----VVTGD---------------NVGNVILLNM-----------------DGKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ----EEEEC---------------SSSBEEEEES-----------------SSCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred ----EEEEe---------------CCCcEeeecc-----------------CcceeEEEecccceEEeeeecCCCceEEE
Confidence 66554 3347888998 66666777777778999999999987665
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
....+ ..|.+||+.+........... -+...+..++|+|||++|+ +...++..
T Consensus 268 s~s~d----------~~v~iwd~~~~~~~~~~~~~~----------------~h~~~v~~~~~spdg~~l~-s~~~D~~i 320 (435)
T 4e54_B 268 TASVD----------QTVKIWDLRQVRGKASFLYSL----------------PHRHPVNAACFSPDGARLL-TTDQKSEI 320 (435)
T ss_dssp EEETT----------SBCCEEETTTCCSSSCCSBCC----------------BCSSCEEECCBCTTSSEEE-EEESSSCE
T ss_pred EecCc----------ceeeEEecccccccceEEEee----------------eccccccceeECCCCCeeE-EEcCCCEE
Confidence 55433 347888887655322110000 0111345778999999664 55556655
Q ss_pred EEEEEECCCCcE
Q 004141 414 VIISVNVSSGEL 425 (771)
Q Consensus 414 ~l~~~d~~tg~~ 425 (771)
.|| |+.+++.
T Consensus 321 ~iw--d~~~~~~ 330 (435)
T 4e54_B 321 RVY--SASQWDC 330 (435)
T ss_dssp EEE--ESSSSSS
T ss_pred EEE--ECCCCcc
Confidence 555 6666653
No 328
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.18 E-value=1.1e-09 Score=114.40 Aligned_cols=287 Identities=11% Similarity=0.024 Sum_probs=155.1
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEecCCc-ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||++ +.||-.+.+ +.-.+|.+..... .......-.+..+ .+..+.|+|||+.|+..+.+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~~h~~------~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRD--KTIIMWKLTRDETNYGIPQRALRGHSH------FVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETT--SCEEEEEECCSSSCSEEEEEEECCCSS------CEEEEEECTTSSEEEEEETTSEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCCCcccceeeEEEeCCCC------CEEEEEECCCCCEEEEEcccccc
Confidence 568899999984 666655443 3333444332211 1111111011111 23689999999999887765532
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
. .|......................+.++....+++..+..+.+||+.+..............+....|++++..
T Consensus 111 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--- 185 (340)
T 4aow_A 111 R--LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN--- 185 (340)
T ss_dssp E--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS---
T ss_pred e--EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC---
Confidence 1 11111000000000011111122334443344445566789999987766554421233446678899999876
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
.++++- ..+..|.++|+ .+++ ...+..+...+.+..|||||+.|+..+
T Consensus 186 -~~~~s~-------------~~d~~i~i~d~-----------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 186 -PIIVSC-------------GWDKLVKVWNL-----------------ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp -CEEEEE-------------ETTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -cEEEEE-------------cCCCEEEEEEC-----------------CCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 444331 12336888887 4444 455666677788999999999888766
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
.+ ..|.+||+.+.......... ..+....|+|++..+ ..+ .++. |
T Consensus 235 ~D-----------g~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~-~~~-~d~~--i 279 (340)
T 4aow_A 235 KD-----------GQAMLWDLNEGKHLYTLDGG--------------------DIINALCFSPNRYWL-CAA-TGPS--I 279 (340)
T ss_dssp TT-----------CEEEEEETTTTEEEEEEECS--------------------SCEEEEEECSSSSEE-EEE-ETTE--E
T ss_pred CC-----------CeEEEEEeccCceeeeecCC--------------------ceEEeeecCCCCcee-ecc-CCCE--E
Confidence 54 25888898765432110000 123456789988643 333 3444 5
Q ss_pred EEEECCCCcEEEecC----------CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 416 ISVNVSSGELLRITP----------AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 416 ~~~d~~tg~~~~l~~----------~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
..+|+.++....-.. ....+....|++|++.|+....+ ..|++-++.++
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tG 338 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIG 338 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC-
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCc
Confidence 555777665432221 11234456789999877654432 23666666554
No 329
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.4e-10 Score=125.87 Aligned_cols=183 Identities=15% Similarity=0.238 Sum_probs=121.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+...+|||||++||..+..+ ...+|+... .+.... |........+.+++|||||+.||..+.++..+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-----~V~iwd~~~--~l~~l~---~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk- 154 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-----NVSVFKDNK--MLTNLD---SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ- 154 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-----CEEEEETTE--EEEECC---CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE-
T ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEeCCc--eeeecc---CCCccccccEEEEEEcCCCCEEEEEcCCCEEE-
Confidence 4688999999999999887654 456664322 222222 11100111236899999999999998877544
Q ss_pred CCccCCCCCCC-------CC----CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee----eccCCCCCCccc
Q 004141 179 PTFSLGSTKGG-------SS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVG 243 (771)
Q Consensus 179 ~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~----~l~~~~~~~~~~ 243 (771)
.|+....... .. ...+..|.....|+||. .+++..+..+++||+.+++.. .+. ......+.
T Consensus 155 -IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~ 230 (588)
T 2j04_A 155 -FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKIT 230 (588)
T ss_dssp -EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCC
T ss_pred -EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEE
Confidence 4443332210 11 13355688889999995 777888899999999988743 231 12345788
Q ss_pred eEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee-cCCCCccccce
Q 004141 244 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTESISSAFFP 322 (771)
Q Consensus 244 ~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-lt~~~~~~~~p 322 (771)
+++|| |+. |+..+ ...|.++|+ .+++... ...+...+.+.
T Consensus 231 svaFs--g~~----LASa~----------------~~tIkLWd~-----------------~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 231 DLKIV--DYK----VVLTC----------------PGYVHKIDL-----------------KNYSISSLKTGSLENFHII 271 (588)
T ss_dssp CEEEE--TTE----EEEEC----------------SSEEEEEET-----------------TTTEEEEEECSCCSCCCEE
T ss_pred EEEEE--CCE----EEEEe----------------CCeEEEEEC-----------------CCCeEEEEEcCCCceEEEE
Confidence 99999 554 66543 137899998 6666633 33666678889
Q ss_pred ee--cCCCCEEEEEe
Q 004141 323 RF--SPDGKFLVFLS 335 (771)
Q Consensus 323 ~~--SpDG~~l~f~~ 335 (771)
.| ||||+.|+-..
T Consensus 272 a~~~s~d~~~La~a~ 286 (588)
T 2j04_A 272 PLNHEKESTILLMSN 286 (588)
T ss_dssp EETTCSSCEEEEECS
T ss_pred EeeeCCCCCEEEEEc
Confidence 99 99998776554
No 330
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.16 E-value=3.5e-09 Score=113.81 Aligned_cols=239 Identities=12% Similarity=0.106 Sum_probs=151.2
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.....||+ ..++.....+ .+.+| ..+....+..... .+ .+.+++|+|||+.|+..+.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~-----~v~lw~~~~~~~~~~~~~~~--~~------~v~~v~~s~~~~~l~~~~~------ 154 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALER-----NVYVWNADSGSVSALAETDE--ST------YVASVKWSHDGSFLSVGLG------ 154 (401)
T ss_dssp CBCEEECT--TSEEEEEETT-----EEEEEETTTCCEEEEEECCT--TC------CEEEEEECTTSSEEEEEET------
T ss_pred EEEEeecC--CCEEEEECCC-----eEEEeeCCCCcEeEeeecCC--CC------CEEEEEECCCCCEEEEECC------
Confidence 34466775 4455544332 34455 4455555544321 11 2368999999999988643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|.+||+.+++..... ......+..+.| +++. |
T Consensus 155 --------------------------------------dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l 189 (401)
T 4aez_A 155 --------------------------------------NGLVDIYDVESQTKLRTM-AGHQARVGCLSW--NRHV----L 189 (401)
T ss_dssp --------------------------------------TSCEEEEETTTCCEEEEE-CCCSSCEEEEEE--ETTE----E
T ss_pred --------------------------------------CCeEEEEECcCCeEEEEe-cCCCCceEEEEE--CCCE----E
Confidence 257899999887754441 344456777888 4554 5
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
+..+ ....|.++|+.. .......+..+...+....|+|||+.|+..+.+.
T Consensus 190 ~~~~---------------~dg~i~i~d~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 190 SSGS---------------RSGAIHHHDVRI---------------ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEc---------------CCCCEEEEeccc---------------CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 5544 334788888720 1223455666777889999999999988877653
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.++........ ....+..++|+|++..++++........|..+
T Consensus 240 -----------~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 240 -----------VVQIWDARSSIPKFTKTN-------------------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp -----------CEEEEETTCSSEEEEECC-------------------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred -----------eEEEccCCCCCccEEecC-------------------CcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 488999877543211000 11235678899999888777642234457777
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
|+.+++..........+....|+++++.++.+....+ ..+.+.++.+
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~v~~~~~ 336 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD--NNLSIWSYSS 336 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT--CEEEEEEEET
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC--CcEEEEecCC
Confidence 8888887665555555677889999998887653332 4567766654
No 331
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.16 E-value=3.7e-09 Score=113.34 Aligned_cols=246 Identities=13% Similarity=0.067 Sum_probs=139.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004141 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
.++||+.|+... ..+.+.+|++... +.. .+.. ....+...+|+|||++|+..+... ..
T Consensus 131 ~s~dg~~l~s~~---------~d~~i~iwd~~~~--~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d~-----~v 189 (393)
T 1erj_A 131 FSPDGKFLATGA---------EDRLIRIWDIENR--KIVMILQG-----HEQDIYSLDYFPSGDKLVSGSGDR-----TV 189 (393)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEETTTT--EEEEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred ECCCCCEEEEEc---------CCCeEEEEECCCC--cEEEEEcc-----CCCCEEEEEEcCCCCEEEEecCCC-----cE
Confidence 357888777543 2356777776322 222 2211 224578899999999998766543 55
Q ss_pred EEec--CCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004141 128 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 128 ~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
.+|+ .++..........+ ..+.|+| ||+.|+..+.+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~l~~~s~d------------------------------- 228 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIEDGV----------TTVAVSPGDGKYIAAGSLD------------------------------- 228 (393)
T ss_dssp EEEETTTTEEEEEEECSSCE----------EEEEECSTTCCEEEEEETT-------------------------------
T ss_pred EEEECCCCeeEEEEEcCCCc----------EEEEEECCCCCEEEEEcCC-------------------------------
Confidence 6663 33333333322222 5889999 89888876432
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeec-c-----CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccC
Q 004141 205 EEDWGETYAGKRQPSLFVININSGEVQAV-K-----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 278 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~-----~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~ 278 (771)
..|.+||+.+++.... . .......+..++|+|||+. |+..+ .
T Consensus 229 -------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~----l~s~s---------------~ 276 (393)
T 1erj_A 229 -------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS----VVSGS---------------L 276 (393)
T ss_dssp -------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE----EEEEE---------------T
T ss_pred -------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE----EEEEe---------------C
Confidence 5688899888765432 1 0123346778999999997 76554 2
Q ss_pred CceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004141 279 PCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 279 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
+..|.++|+.... ... .......+. ...+..+...+.+..|+|||++|+..+.+ ..|++||+.
T Consensus 277 d~~v~~wd~~~~~----~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----------~~v~iwd~~ 340 (393)
T 1erj_A 277 DRSVKLWNLQNAN----NKS-DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----------RGVLFWDKK 340 (393)
T ss_dssp TSEEEEEEC--------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----------SEEEEEETT
T ss_pred CCEEEEEECCCCC----Ccc-cccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-----------CeEEEEECC
Confidence 2367777762100 000 000001111 22344555668889999999998876655 258899988
Q ss_pred CCCCCCCccceee-EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004141 358 TNGNFSSLEKIVD-VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 419 (771)
+++......+... +..+. ......|+||+. ++++...++...||.+.
T Consensus 341 ~~~~~~~l~~h~~~v~~v~--------------~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVA--------------VANGSSLGPEYN-VFATGSGDCKARIWKYK 388 (393)
T ss_dssp TCCEEEEEECCSSCEEEEE--------------ECSSCTTCTTCE-EEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEE--------------ecCCcCcCCCCC-EEEEECCCCcEEECccc
Confidence 7654221111100 00000 001234566776 55677778888888764
No 332
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.15 E-value=3.9e-09 Score=112.62 Aligned_cols=204 Identities=9% Similarity=0.043 Sum_probs=129.1
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCC
Q 004141 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 174 (771)
..+...+|||+| +.||..+..+ .+.+| ..+........ .+..+ .+.++.|+| |++.|+..+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~-~~h~~------~v~~~~~~~~~~~~l~s~~~-- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQG-MGPGD------AITGMKFNQFNTNQLFVSSI-- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECC-CSTTC------BEEEEEEETTEEEEEEEEET--
T ss_pred CCEEEEEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeec-CCcCC------ceeEEEeCCCCCCEEEEEeC--
Confidence 457889999999 7777665533 34555 33344443332 11111 236899999 6676666532
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC-CCCccceEEEecCCCC
Q 004141 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEG 253 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~ 253 (771)
...|.+||+.++....+.... ....+..++|+||++.
T Consensus 140 ------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 177 (383)
T 3ei3_B 140 ------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM 177 (383)
T ss_dssp ------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence 257899999987776663211 1245788999999997
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCC-EEE
Q 004141 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK-FLV 332 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~-~l~ 332 (771)
|+..+ .+..|+++|+ .+.....+..+...+....|+|+|+ .|+
T Consensus 178 ----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 178 ----LATGD---------------STGRLLLLGL-----------------DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp ----EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred ----EEEEC---------------CCCCEEEEEC-----------------CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 77655 3347999997 5566677777778899999999999 555
Q ss_pred EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEeeeCC
Q 004141 333 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGS 411 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-Dg~~l~~~~~~~~ 411 (771)
..+.+ ..|.+||+.+.+.... ...... ....+..++|+| ||+.|+ +...++
T Consensus 222 s~~~d-----------~~i~iwd~~~~~~~~~------~~~~~~----------~~~~v~~~~~s~~~~~~l~-~~~~d~ 273 (383)
T 3ei3_B 222 TSSVD-----------ATVKLWDLRNIKDKNS------YIAEMP----------HEKPVNAAYFNPTDSTKLL-TTDQRN 273 (383)
T ss_dssp EEETT-----------SEEEEEEGGGCCSTTC------EEEEEE----------CSSCEEEEEECTTTSCEEE-EEESSS
T ss_pred EEeCC-----------CEEEEEeCCCCCcccc------eEEEec----------CCCceEEEEEcCCCCCEEE-EEcCCC
Confidence 44433 3588899876442111 011000 011345788999 998665 444444
Q ss_pred eeEEEEEECCCCc
Q 004141 412 SQVIISVNVSSGE 424 (771)
Q Consensus 412 ~~~l~~~d~~tg~ 424 (771)
. |..+|+.+++
T Consensus 274 ~--i~iwd~~~~~ 284 (383)
T 3ei3_B 274 E--IRVYSSYDWS 284 (383)
T ss_dssp E--EEEEETTBTT
T ss_pred c--EEEEECCCCc
Confidence 4 5555776655
No 333
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.15 E-value=1.3e-09 Score=117.23 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=115.9
Q ss_pred ceEEEEEccCCc--------eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004141 218 PSLFVININSGE--------VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 218 ~~l~v~d~~~~~--------~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
..|.+||+.++. ...+ ......+..+.|+|||+. +++++. .+..|.++|+
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~----~l~s~~--------------~dg~i~iwd~-- 161 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITL--EGHTKRVGIVAWHPTAQN----VLLSAG--------------CDNVILVWDV-- 161 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEE--ECCSSCEEEEEECSSBTT----EEEEEE--------------TTSCEEEEET--
T ss_pred CeEEEEEccCCCCccccCCceEEe--cCCCCeEEEEEECcCCCC----EEEEEc--------------CCCEEEEEEC--
Confidence 578999988763 2333 234456889999999976 666652 2337888898
Q ss_pred ccchhhhhhhhcCCCCCCc-ceec--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcc
Q 004141 290 YKSEASELELKESSSEDLP-VVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 366 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 366 (771)
.+++ ...+ ..+...+....|+|||+.|+..+.+ ..|.+||+.+++....
T Consensus 162 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~-- 213 (402)
T 2aq5_A 162 ---------------GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----------KRVRVIEPRKGTVVAE-- 213 (402)
T ss_dssp ---------------TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----------SEEEEEETTTTEEEEE--
T ss_pred ---------------CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----------CcEEEEeCCCCceeee--
Confidence 4444 3455 4566778999999999999887755 3589999877553111
Q ss_pred ceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE--EEec-CCCCCceeeEEeec
Q 004141 367 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL--LRIT-PAESNFSWSLLTLD 443 (771)
Q Consensus 367 ~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~--~~l~-~~~~~~~~~~~s~d 443 (771)
+... ... ..+..+.|+|||+.|+..........|..+|+.+++. .... .....+....|+++
T Consensus 214 -------~~~~-~~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 214 -------KDRP-HEG-------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp -------EECS-SCS-------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred -------eccC-CCC-------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 0000 000 1135678999998555443223445677778877653 2222 22334566789999
Q ss_pred CCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 444 GDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 444 g~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
++.++++.... ..|.+.++.++
T Consensus 279 ~~~l~~~g~~d---g~i~i~d~~~~ 300 (402)
T 2aq5_A 279 TNIVYLCGKGD---SSIRYFEITSE 300 (402)
T ss_dssp TTEEEEEETTC---SCEEEEEECSS
T ss_pred CCEEEEEEcCC---CeEEEEEecCC
Confidence 99887766422 35777776544
No 334
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.15 E-value=6.1e-10 Score=129.13 Aligned_cols=244 Identities=11% Similarity=0.044 Sum_probs=148.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec---CCc----ceE-EEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQ----LEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~---~~~----~~~-~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
..+...+|+|++..+++....+ + .+.+|+ ... ..+ +...... +.+++|||||+.|+..
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D-~---~i~~W~~~~~~~~~~~~~~~~~~h~~~----------v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRD-K---SIILWKLTKDDKAYGVAQRRLTGHSHF----------VEDVVLSSDGQFALSG 448 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETT-S---EEEEEECCCSTTCSCEEEEEEECCSSC----------EEEEEECTTSSEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCC-C---cEEEEEccCCCcccccccceecCCCCc----------EEEEEECCCCCEEEEE
Confidence 4578899999875544433322 2 455552 111 111 1111222 2689999999999988
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC--CCCCCccceEEEe
Q 004141 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWA 248 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~--~~~~~~~~~~~ws 248 (771)
+.+...+ .|+............+........|+++....+++..+..|.+||+.+.....+.. ......+..+.|+
T Consensus 449 s~Dg~v~--vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 449 SWDGELR--LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp ETTSEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred eCCCcEE--EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 7765433 34432222222223344444566788887777777788999999987765555420 1223357789999
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC
Q 004141 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 327 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD 327 (771)
|++... +++++. .+..|.++|+ .+++ ...+..+...+.+..||||
T Consensus 527 ~~~~~~---~l~s~s--------------~d~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 527 PNTLQP---TIVSAS--------------WDKTVKVWNL-----------------SNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp SCSSSC---EEEEEE--------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCcc---eEEEEe--------------CCCeEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEeCC
Confidence 998420 344331 2346888888 4444 4556677778999999999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
|+.|+..+.+. .|.+||+.+++....... ...+..++|+||+..|+..
T Consensus 573 g~~l~sg~~Dg-----------~i~iwd~~~~~~~~~~~~--------------------~~~v~~~~~sp~~~~l~~~- 620 (694)
T 3dm0_A 573 GSLCASGGKDG-----------VVLLWDLAEGKKLYSLEA--------------------NSVIHALCFSPNRYWLCAA- 620 (694)
T ss_dssp SSEEEEEETTS-----------BCEEEETTTTEEEECCBC--------------------SSCEEEEEECSSSSEEEEE-
T ss_pred CCEEEEEeCCC-----------eEEEEECCCCceEEEecC--------------------CCcEEEEEEcCCCcEEEEE-
Confidence 99988777553 588999877653211000 0123467899999855433
Q ss_pred eeCCeeEEEEEECCCCcEEE
Q 004141 408 IWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~ 427 (771)
. ++. |..+|+.+++...
T Consensus 621 ~-~~~--i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 621 T-EHG--IKIWDLESKSIVE 637 (694)
T ss_dssp E-TTE--EEEEETTTTEEEE
T ss_pred c-CCC--EEEEECCCCCChh
Confidence 2 333 6666888877543
No 335
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.13 E-value=2.3e-09 Score=112.21 Aligned_cols=241 Identities=11% Similarity=0.044 Sum_probs=145.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc----ceEEEecCCcccccccCCCcccceeecCCCC-eEEEEecC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~-~la~~~~~ 173 (771)
..+...+|||||++|+.....+ .-.+|.+. .+. ...+...... +..++|+|||+ .|+..+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~--~v~iw~~~-~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~~~~~- 77 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDG--SLTVYKFD-IQAKNVDLLQSLRYKHP----------LLCCNFIDNTDLQIYVGTV- 77 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTS--EEEEEEEE-TTTTEEEEEEEEECSSC----------EEEEEEEESSSEEEEEEET-
T ss_pred CcEEEEEEcCCCCEEEEEcCCC--eEEEEEeC-CCCccccceeeeecCCc----------eEEEEECCCCCcEEEEEcC-
Confidence 4588899999999998775432 22233332 333 2222222222 26899999999 8887643
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc-cCCceeeccCCCCCCccceEEEecCCC
Q 004141 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~-~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
...|++||+ .+++...+.+......+..+.|+| ++
T Consensus 78 -------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~ 113 (342)
T 1yfq_A 78 -------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD 113 (342)
T ss_dssp -------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT
T ss_pred -------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC
Confidence 257999999 999887773211556788999999 77
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC---------CcceecCCCCcccccee
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED---------LPVVNLTESISSAFFPR 323 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~lt~~~~~~~~p~ 323 (771)
. |+..+ .+..|.++|+ .+ ++..........+....
T Consensus 114 ~----l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 114 K----LIAAS---------------WDGLIEVIDP-----------------RNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp E----EEEEE---------------TTSEEEEECH-----------------HHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred E----EEEEc---------------CCCeEEEEcc-----------------cccccccccccCCeeeEEeeCCceEEEE
Confidence 5 66554 3347888887 32 33222223556688899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCC-CCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCC
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGC 401 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-Dg~ 401 (771)
|+|++ |+..+.+ ..|.+||+.+ +......... . ....+..++|+| |++
T Consensus 158 ~~~~~--l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~-------------~----~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 158 TNSSR--LIVGMNN-----------SQVQWFRLPLCEDDNGTIEES-------------G----LKYQIRDVALLPKEQE 207 (342)
T ss_dssp ECSSE--EEEEEST-----------TEEEEEESSCCTTCCCEEEEC-------------S----CSSCEEEEEECSGGGC
T ss_pred ecCCc--EEEEeCC-----------CeEEEEECCccccccceeeec-------------C----CCCceeEEEECCCCCC
Confidence 99998 5554433 3588999876 4321100000 0 001245678999 998
Q ss_pred EEEEEeeeCCeeEEEEEECC-----CCcEEEecCCCC---------CceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 402 TMLLSSIWGSSQVIISVNVS-----SGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~-----tg~~~~l~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
.|+ +...++...||.++.. ......+..... .+....|+++++.|+....+ ..+++.++.+
T Consensus 208 ~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~vwd~~~ 282 (342)
T 1yfq_A 208 GYA-CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD----GIISCWNLQT 282 (342)
T ss_dssp EEE-EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT----SCEEEEETTT
T ss_pred EEE-EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC----ceEEEEcCcc
Confidence 654 4555677777766654 133344433321 45556788998877655432 3467766654
Q ss_pred c
Q 004141 468 K 468 (771)
Q Consensus 468 ~ 468 (771)
+
T Consensus 283 ~ 283 (342)
T 1yfq_A 283 R 283 (342)
T ss_dssp T
T ss_pred H
Confidence 3
No 336
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.2e-08 Score=106.39 Aligned_cols=262 Identities=12% Similarity=0.131 Sum_probs=138.6
Q ss_pred cccceeEEEEEEeecCCCCccc-eeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecC-C-c----ceEEE
Q 004141 67 ANKRKKFMLSTVISKENENSVT-FQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQ-S-Q----LEKEF 139 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~-~-~----~~~~~ 139 (771)
.....+.+.++++..+...... +... .....+...+|||+|+.||..+... ...+|+- . . .....
T Consensus 29 s~~~D~~i~lw~~~~~~~~~~~~~~~~---~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYDDFTLIDVLDET---AHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTFEMDLL 100 (330)
T ss_dssp EEESSSCEEEEECSSSCCEEEEEECTT---CCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------CCCEEE
T ss_pred EEcCCCEEEEEEecCCCeEEEEEEecC---CccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccccceeE
Confidence 3344566777776433211111 1111 0224588899999999998776543 3445521 1 0 11111
Q ss_pred ecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCce
Q 004141 140 HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 219 (771)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 219 (771)
..-.+..+ .+.+++|||||++|+..+.+ ..
T Consensus 101 ~~~~~h~~------~V~~v~~sp~g~~las~s~D--------------------------------------------~~ 130 (330)
T 2hes_X 101 AIIEGHEN------EVKGVAWSNDGYYLATCSRD--------------------------------------------KS 130 (330)
T ss_dssp EEEC----------CEEEEEECTTSCEEEEEETT--------------------------------------------SC
T ss_pred EEEcCCCC------cEEEEEECCCCCEEEEEeCC--------------------------------------------CE
Confidence 11111111 22689999999999886543 56
Q ss_pred EEEEEcc-CCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004141 220 LFVININ-SGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 220 l~v~d~~-~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
|.+||+. ++. ...+ ......+..+.|+||++. |+..+. +..|.++|+
T Consensus 131 v~iwd~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s~---------------D~~i~iW~~------- 182 (330)
T 2hes_X 131 VWIWETDESGEEYECISVL--QEHSQDVKHVIWHPSEAL----LASSSY---------------DDTVRIWKD------- 182 (330)
T ss_dssp EEEEECCTTCCCCEEEEEE--CCCSSCEEEEEECSSSSE----EEEEET---------------TSCEEEEEE-------
T ss_pred EEEEeccCCCCCeEEEEEe--ccCCCceEEEEECCCCCE----EEEEcC---------------CCeEEEEEC-------
Confidence 8888884 322 2233 334456889999999987 776652 225666665
Q ss_pred hhhhhhcCCCCCC---cceecCCCCccccceeecCC--CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcccee
Q 004141 295 SELELKESSSEDL---PVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 369 (771)
Q Consensus 295 ~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~SpD--G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 369 (771)
..+ ....+..+...+....|+|+ +..|+..+.+. .|.+||+.++..... ...
T Consensus 183 ----------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----------~v~iw~~~~~~~~~~--~~~ 239 (330)
T 2hes_X 183 ----------YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----------TVRVWKYMGDDEDDQ--QEW 239 (330)
T ss_dssp ----------ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----------CEEEEEEEEECTTSC--EEE
T ss_pred ----------CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----------eEEEEEecCCCcccc--cee
Confidence 222 23456667778889999999 66676665543 467777654322110 000
Q ss_pred eEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE---e-cCCCC-CceeeEEee--
Q 004141 370 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR---I-TPAES-NFSWSLLTL-- 442 (771)
Q Consensus 370 ~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~---l-~~~~~-~~~~~~~s~-- 442 (771)
.....+ ++.+...+..++|++++ ++++...++...||.+. +++.+. . ..... .+....|++
T Consensus 240 ~~~~~~--------~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 240 VCEAIL--------PDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEV--DGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp EEEEEC--------CSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEE--TTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred EEeeec--------ccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcC--CCceEEEeccccccccceEEEEEEecCC
Confidence 011111 11111235567899765 44566667777777554 554322 2 12222 344456777
Q ss_pred cCCEEEE
Q 004141 443 DGDNIIA 449 (771)
Q Consensus 443 dg~~l~~ 449 (771)
+++.|+.
T Consensus 308 ~~~~las 314 (330)
T 2hes_X 308 GKTILAT 314 (330)
T ss_dssp --CCEEE
T ss_pred CceEEEE
Confidence 4554443
No 337
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.12 E-value=4.5e-09 Score=109.80 Aligned_cols=276 Identities=14% Similarity=0.104 Sum_probs=145.5
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccc
Q 004141 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHG 147 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g 147 (771)
.++.|.+|++.......... ...+......+....|||||++|+...... ...+|. ..............
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~-- 130 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKD-- 130 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC--
T ss_pred CCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEcccc-----cceEEeecccceeeeecCCCCc--
Confidence 44567777775443221100 011111225688899999999998766543 444552 22222222211111
Q ss_pred cccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCC-CCCCccCCCCCCcccccCCcCcc--cCCccCceEEEEE
Q 004141 148 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG-GSSDKDCNSWKGQGDWEEDWGET--YAGKRQPSLFVIN 224 (771)
Q Consensus 148 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~g~~--~~~~~~~~l~v~d 224 (771)
.....++|+++.|+..+.+.... .|+...... ......+........|.++.... +.+.....|.+||
T Consensus 131 -------~~~~~~~~~~~~l~s~s~d~~~~--~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 131 -------VLSVAFSSDNRQIVSGSRDKTIK--LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp -------EEEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred -------eeEEEEeecCccceeecCCCeEE--EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 14778999999998877654322 122110000 00011111122223344432222 2334567899999
Q ss_pred ccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004141 225 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 202 ~~~~~~~~~~-~~h~~~v~~~~~s~~~~~----l~s~s---------------~Dg~i~iwd~----------------- 244 (340)
T 4aow_A 202 LANCKLKTNH-IGHTGYLNTVTVSPDGSL----CASGG---------------KDGQAMLWDL----------------- 244 (340)
T ss_dssp TTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTCEEEEEET-----------------
T ss_pred CCCCceeeEe-cCCCCcEEEEEECCCCCE----EEEEe---------------CCCeEEEEEe-----------------
Confidence 9988765542 334456788999999996 76654 3347888887
Q ss_pred CCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCc
Q 004141 305 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 384 (771)
Q Consensus 305 ~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 384 (771)
.+.+..........+....|+|++..++ .+.+ ..|.+||+.++......... .. ...+.
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d-----------~~i~iwd~~~~~~~~~~~~~--~~-------~~~~~ 303 (340)
T 4aow_A 245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATG-----------PSIKIWDLEGKIIVDELKQE--VI-------STSSK 303 (340)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSSSEEE-EEET-----------TEEEEEETTTTEEEEEECCC----------------
T ss_pred ccCceeeeecCCceEEeeecCCCCceee-ccCC-----------CEEEEEECCCCeEEEecccc--ce-------eeecc
Confidence 4444433333445678889999987554 3322 34888888765431110000 00 00000
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004141 385 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 385 g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
.....+..++|+|||+.| ++...++...||. +.+|+
T Consensus 304 -~h~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~--~~tGt 339 (340)
T 4aow_A 304 -AEPPQCTSLAWSADGQTL-FAGYTDNLVRVWQ--VTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEE-EEEETTSCEEEEE--EEC--
T ss_pred -CCCCCEEEEEECCCCCEE-EEEeCCCEEEEEe--CCCcC
Confidence 011234567899999865 5566667666765 44664
No 338
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.12 E-value=1.2e-08 Score=106.65 Aligned_cols=275 Identities=7% Similarity=-0.092 Sum_probs=151.9
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCC--ccceeecCCccccccceEEEeCCCCC-eEEEEecCCCCCCeE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN--SVTFQWAPFPVEMTGASAVVPSPSGS-KLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~SPdG~-~la~~~~~~~~~~~~ 126 (771)
++||..|+... ..+.+++|++...... ...+... ...+...+|+|+|+ +|+.....+ .
T Consensus 20 s~~~~~l~~~~---------~d~~v~iw~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg-----~ 80 (342)
T 1yfq_A 20 IPSKSLLLITS---------WDGSLTVYKFDIQAKNVDLLQSLRY-----KHPLLCCNFIDNTDLQIYVGTVQG-----E 80 (342)
T ss_dssp EGGGTEEEEEE---------TTSEEEEEEEETTTTEEEEEEEEEC-----SSCEEEEEEEESSSEEEEEEETTS-----C
T ss_pred cCCCCEEEEEc---------CCCeEEEEEeCCCCccccceeeeec-----CCceEEEEECCCCCcEEEEEcCCC-----e
Confidence 45777766542 3356777777544311 2222212 25688899999999 887765432 3
Q ss_pred EEEe-c-CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004141 127 FELW-S-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 127 ~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+.+| . .......+.. .... +.+..+.|+| ++.|+..+.
T Consensus 81 i~~wd~~~~~~~~~~~~-~~~~------~~v~~l~~~~-~~~l~s~~~-------------------------------- 120 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTN-NEAN------LGICRICKYG-DDKLIAASW-------------------------------- 120 (342)
T ss_dssp EEEECSSSSSSEEECBS-CCCC------SCEEEEEEET-TTEEEEEET--------------------------------
T ss_pred EEEEEeccCCceEeccc-cCCC------CceEEEEeCC-CCEEEEEcC--------------------------------
Confidence 4455 3 3322222211 0011 1236899999 888887543
Q ss_pred cCCcCcccCCccCceEEEEEccC---------CceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004141 205 EEDWGETYAGKRQPSLFVININS---------GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~---------~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
...|.+||+.+ ++.... ......+..+.|+|++ |+..+
T Consensus 121 ------------d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~------l~~~~------------- 167 (342)
T 1yfq_A 121 ------------DGLIEVIDPRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTNSSR------LIVGM------------- 167 (342)
T ss_dssp ------------TSEEEEECHHHHTTBCEEEEESCSSS--SSSCCCEEEEEECSSE------EEEEE-------------
T ss_pred ------------CCeEEEEcccccccccccccCCeeeE--EeeCCceEEEEecCCc------EEEEe-------------
Confidence 25788999876 554433 3345567788999875 44443
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCC-Cc---ceecCCCCccccceeecC-CCCEEEEEecCCCCCCCCcccccc
Q 004141 276 YNRPCALYAVRVSLYKSEASELELKESSSED-LP---VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDS 350 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~---~~~lt~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~~g~~~~~~~ 350 (771)
....|+++|+ .. +. ..........+....|+| ||+.|+..+.+. .
T Consensus 168 --~d~~i~i~d~-----------------~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg-----------~ 217 (342)
T 1yfq_A 168 --NNSQVQWFRL-----------------PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG-----------R 217 (342)
T ss_dssp --STTEEEEEES-----------------SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS-----------E
T ss_pred --CCCeEEEEEC-----------------CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC-----------c
Confidence 2347888887 33 22 123334455688999999 999888777542 4
Q ss_pred ceeeecCCCCCCCCccceeeEEecccccCCCCCcc-cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004141 351 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 351 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
|.+|++..+.......... .. ...... ..+ -....+..++|+||++.|+ +...++. |+.+|+.+++.....
T Consensus 218 i~i~~~~~~~~~~~~~~~~-~~---~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRF-AF---RCHRLN-LKDTNLAYPVNSIEFSPRHKFLY-TAGSDGI--ISCWNLQTRKKIKNF 289 (342)
T ss_dssp EEEEECCTTCCSTTCTTCE-EE---ECCCCC-TTCCSSCCCEEEEEECTTTCCEE-EEETTSC--EEEEETTTTEEEEEC
T ss_pred EEEEEEcCCCcccccccce-ee---eccccc-ccccccceeEEEEEEcCCCCEEE-EecCCce--EEEEcCccHhHhhhh
Confidence 6677766541000000000 00 000000 000 0011345678999998665 4444444 555688888765544
Q ss_pred CCC-CCceeeEEeecCCEEEEEEeCCC
Q 004141 430 PAE-SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 430 ~~~-~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
... .. ....+.++++.|+....+..
T Consensus 290 ~~~h~~-~v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 290 AKFNED-SVVKIACSDNILCLATSDDT 315 (342)
T ss_dssp CCCSSS-EEEEEEECSSEEEEEEECTH
T ss_pred hcccCC-CceEecCCCCeEEEEecCCc
Confidence 432 21 12223388888877765543
No 339
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.12 E-value=1.8e-09 Score=115.63 Aligned_cols=274 Identities=12% Similarity=0.045 Sum_probs=155.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc------ceEEEec-CCcccccccCCCcccceeecCC----C-
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ------LEKEFHV-PQTVHGSVYADGWFEGISWNSD----E- 164 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~------~~~~~~~-~~~~~g~~~~~~~~~~~~wSpD----g- 164 (771)
..+...+|+| +.|+..+..+ .+.+| ..+. ....+.. ... +.++.|+|| |
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHFVHKSG----------LHHVDVLQAIERDAF 79 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEECCTTC----------EEEEEEEEEEETTTE
T ss_pred cCeEEEEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEecCCCc----------EEEEEEecccccCCc
Confidence 4578899999 6776655432 44455 3333 2222221 222 268999999 9
Q ss_pred --CeEEEEecCCCCCCCCccCCCCCC-----CCCCccC-----CCCCCccccc----CCcCc-ccCCccCceEEEEEccC
Q 004141 165 --TLIAYVAEEPSPSKPTFSLGSTKG-----GSSDKDC-----NSWKGQGDWE----EDWGE-TYAGKRQPSLFVININS 227 (771)
Q Consensus 165 --~~la~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~----~d~g~-~~~~~~~~~l~v~d~~~ 227 (771)
+.|+..+.+.... .|+...... ......+ ........|. ++... .+++.....|++||+.+
T Consensus 80 ~~~~l~s~~~dg~i~--iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 80 ELCLVATTSFSGDLL--FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEEETTSCEE--EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred cccEEEEEcCCCCEE--EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 9888877655332 233211111 1111112 1333456688 77666 66777788999999987
Q ss_pred ------Ccee------eccC-----CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccc
Q 004141 228 ------GEVQ------AVKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 290 (771)
Q Consensus 228 ------~~~~------~l~~-----~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 290 (771)
++.. .+.+ ......+..+.|+||| . |+..+ .+..|+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----l~~~~---------------~dg~i~i~d~--- 214 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L----IATGF---------------NNGTVQISEL--- 214 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E----EEEEC---------------TTSEEEEEET---
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e----EEEEe---------------CCCcEEEEEC---
Confidence 4432 2211 1234467889999999 8 88776 3347888998
Q ss_pred cchhhhhhhhcCCCCCCcc-eecCC---C---CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004141 291 KSEASELELKESSSEDLPV-VNLTE---S---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~-~~lt~---~---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.+++. ..+.. + ...+....|+|||+.|+..+.+. ....|.+||+.+++...
T Consensus 215 --------------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--------~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 215 --------------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--------SFGCITLYETEFGERIG 272 (397)
T ss_dssp --------------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--------TEEEEEEEETTTCCEEE
T ss_pred --------------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--------CCceEEEEECCCCcccc
Confidence 44443 34444 4 66788999999999988776541 11468999988765321
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-------C-----
Q 004141 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-------A----- 431 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-------~----- 431 (771)
............ -..+ .....+..++|+||++.|+ +...++ .|..+|+.+++...... .
T Consensus 273 ~~~~~~~~~~~~----~~~~--~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 273 SLSVPTHSSQAS----LGEF--AHSSWVMSLSFNDSGETLC-SAGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp EECBC------------CCB--SBSSCEEEEEECSSSSEEE-EEETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred eeccCccccccc----cccc--ccCCcEEEEEECCCCCEEE-EEeCCC--eEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 111100000000 0000 0112345788999999664 444444 45556887777554433 2
Q ss_pred ----------CCCceeeEEeecCC
Q 004141 432 ----------ESNFSWSLLTLDGD 445 (771)
Q Consensus 432 ----------~~~~~~~~~s~dg~ 445 (771)
...+....|+++++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTT
T ss_pred ccccccccccCCceeEEEeccccc
Confidence 34456678888883
No 340
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.12 E-value=8.8e-09 Score=105.56 Aligned_cols=252 Identities=14% Similarity=0.030 Sum_probs=146.5
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
....|+|+|+|+.|+++.... ..++.++..+. .+........ ..++.|+|||+.++.. .
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~---~~i~~~~~~~~-~~~~~~~~~~---------~~~l~~~~dg~l~v~~--~------ 87 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQ---NRTWAWSDDGQ-LSPEMHPSHH---------QNGHCLNKQGHLIACS--H------ 87 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGG---TEEEEEETTSC-EEEEESSCSS---------EEEEEECTTCCEEEEE--T------
T ss_pred cccCCeEeCCCCEEEEEeCCC---CEEEEEECCCC-eEEEECCCCC---------cceeeECCCCcEEEEe--c------
Confidence 356899999999887776533 35777773333 3333322211 1588999999844331 1
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCcc
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~ 256 (771)
....|+++|..+++.+.+..... ...+..++++|||+
T Consensus 88 ------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 127 (296)
T 3e5z_A 88 ------------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS---- 127 (296)
T ss_dssp ------------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC----
T ss_pred ------------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC----
Confidence 22578999998887766621111 12356789999997
Q ss_pred EEEEEeecCcce--eeeeee-eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEE
Q 004141 257 YLVFVGWSSETR--KLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 257 ~l~~~~~~~~~~--~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f 333 (771)
|+++....+.. ..+... .......||.++. + ++.+.+.........++|||||+.| +
T Consensus 128 -l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~gi~~s~dg~~l-v 187 (296)
T 3e5z_A 128 -LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-----------------D-GTLSAPIRDRVKPNGLAFLPSGNLL-V 187 (296)
T ss_dssp -EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT-----------------T-SCEEEEECCCSSEEEEEECTTSCEE-E
T ss_pred -EEEECCccccccccccccccccCCCcEEEEECC-----------------C-CCEEEeecCCCCCccEEECCCCCEE-E
Confidence 66652100000 000000 0011347999986 4 5566665555556789999999988 5
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
..... ..|+++++...+. +... ..++ .. .. ..+..+++++||+ |+++. ..
T Consensus 188 ~~~~~----------~~i~~~~~~~~g~--~~~~----~~~~-~~-~~-------~~p~~i~~d~~G~-l~v~~----~~ 237 (296)
T 3e5z_A 188 SDTGD----------NATHRYCLNARGE--TEYQ----GVHF-TV-EP-------GKTDGLRVDAGGL-IWASA----GD 237 (296)
T ss_dssp EETTT----------TEEEEEEECSSSC--EEEE----EEEE-CC-SS-------SCCCSEEEBTTSC-EEEEE----TT
T ss_pred EeCCC----------CeEEEEEECCCCc--CcCC----CeEe-eC-CC-------CCCCeEEECCCCC-EEEEc----CC
Confidence 55432 4689998863221 1000 0111 00 01 1235678999997 55554 24
Q ss_pred EEEEEECCCCcEEEecCCCCCceeeEE-eecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 414 VIISVNVSSGELLRITPAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~~~~~~~~~~~-s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.|++++.++..+..+..... .....| +++++.|+++..+ .|++++..+.
T Consensus 238 ~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 238 GVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp EEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred eEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 68888987555566655444 555677 4788888876642 6888776543
No 341
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.12 E-value=6.7e-10 Score=112.30 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=68.5
Q ss_pred EEEEEcCCCCCCCC-CcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 539 LIVVLHGGPHSVSL-SSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 539 ~vv~~HGg~~~~~~-~~~~~~~~~la~~--G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
.||++||.+.+... ..|...+..|++. ||.|+++|+ | +|.+..... .+.....+++...++.+...... .
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G---~g~s~~~~~--~~~~~~~~~~~~~~~~l~~~~~l-~ 79 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G---KTLREDVEN--SFFLNVNSQVTTVCQILAKDPKL-Q 79 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S---SSHHHHHHH--HHHSCHHHHHHHHHHHHHSCGGG-T
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C---CCCcccccc--ccccCHHHHHHHHHHHHHhhhhc-c
Confidence 48999997655322 4688888888765 889999997 7 554321000 00011123333334444322111 2
Q ss_pred CeEEEEEcChhHHHHHHHHhhCCCc-eeEEEecCCc
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNPL 650 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~-~~~~v~~~p~ 650 (771)
+++.|+||||||.++..++.++|+. ++.+|+.++.
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 6899999999999999999999984 9999877653
No 342
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.11 E-value=4.1e-11 Score=132.74 Aligned_cols=132 Identities=18% Similarity=0.185 Sum_probs=89.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch--HHHH-HHH-HCCcEEEEECCCCCC-CCC--hhhhh
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FLS-SVGYSLLIVNYRGSL-GFG--EEALQ 586 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~--~~~~-~la-~~G~~Vv~~d~rG~~-~~g--~~~~~ 586 (771)
+.|.+.+ .+|.|......++.|+||++|||++...... +. ..+. .++ ..|++|+.+|||... ++. .....
T Consensus 102 sedcl~l--~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 179 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA 179 (544)
T ss_dssp CSCCCEE--EEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEE--EEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc
Confidence 4455555 5788875444567899999999987654432 21 1222 222 358999999999643 111 00001
Q ss_pred cCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--------CCceeEEEecCCcc
Q 004141 587 SLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLC 651 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~p~~ 651 (771)
.. .+...+.|+.++++|+.++ ...|++||.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 180 ~~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 180 EG---NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HT---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred cC---CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 11 2334488999999999886 247999999999999999998877642 45799999999854
No 343
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.11 E-value=6.5e-10 Score=118.64 Aligned_cols=273 Identities=10% Similarity=0.021 Sum_probs=144.9
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcc---eEEEec
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL---EKEFHV 141 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 141 (771)
+......+.+.+|++.... ....+... ...+...+|||||++||..... +...+|.+...... ..+...
T Consensus 81 l~s~s~D~~v~iWd~~~~~-~~~~~~~h-----~~~v~~~~~s~~g~~las~~~d--~~v~iw~~~~~~~~~~~~~~~~~ 152 (380)
T 3iz6_a 81 IVSASQDGRLIVWNALTSQ-KTHAIKLH-----CPWVMECAFAPNGQSVACGGLD--SACSIFNLSSQADRDGNMPVSRV 152 (380)
T ss_dssp EEEEETTSEEEEEETTTTE-EEEEEECC-----CTTCCCCEECTTSSEEEECCSS--SCCEEEECCCCSSCCCSSTTCCB
T ss_pred EEEEeCCCeEEEEECCCCc-cceEEecC-----CCCEEEEEECCCCCEEEEeeCC--CcEEEEECCCCccccCCccceee
Confidence 3333455677777763321 12222211 2446778999999998765432 34445544321100 000011
Q ss_pred CCcccccccCCCcccceeecCCCC-eEEEEecCCCCCCCCccCCCCCCCCC-----CccCCCCCCcccccC-CcCcccCC
Q 004141 142 PQTVHGSVYADGWFEGISWNSDET-LIAYVAEEPSPSKPTFSLGSTKGGSS-----DKDCNSWKGQGDWEE-DWGETYAG 214 (771)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~wSpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-d~g~~~~~ 214 (771)
-.+..+ ......|+|++. .|+..+.+...+ .|+......... ...+........+.+ +....+++
T Consensus 153 ~~gh~~------~v~~~~~~~~~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 153 LTGHKG------YASSCQYVPDQETRLITGSGDQTCV--LWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CCCCSS------CCCCCBCCSSSSSCEEEECTTSCEE--EECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE
T ss_pred ccCCCc------ceEEEEEecCCCCEEEEECCCCcEE--EEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE
Confidence 111111 225788999754 566665554432 333222111000 011112222233433 33334455
Q ss_pred ccCceEEEEEccC-Cc-eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004141 215 KRQPSLFVININS-GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 215 ~~~~~l~v~d~~~-~~-~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
..+..|.+||+.. ++ ...+ ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 225 s~D~~v~~wd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s---------------~D~~i~lwd~----- 278 (380)
T 3iz6_a 225 SCDTTVRLWDLRITSRAVRTY--HGHEGDINSVKFFPDGQR----FGTGS---------------DDGTCRLFDM----- 278 (380)
T ss_dssp ETTSCEEEEETTTTCCCCEEE--CCCSSCCCEEEECTTSSE----EEEEC---------------SSSCEEEEET-----
T ss_pred ECCCeEEEEECCCCCcceEEE--CCcCCCeEEEEEecCCCe----EEEEc---------------CCCeEEEEEC-----
Confidence 5678999999863 33 3444 344557889999999997 77665 3346788887
Q ss_pred hhhhhhhhcCCCCCCcce-ecCCC-------CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC
Q 004141 293 EASELELKESSSEDLPVV-NLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 364 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~-~lt~~-------~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 364 (771)
.++... .+... ...+.+.+|||||+.|+..+.+ ..|++||+.+++....
T Consensus 279 ------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------g~i~vwd~~~~~~~~~ 335 (380)
T 3iz6_a 279 ------------RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----------GDCYVWDTLLAEMVLN 335 (380)
T ss_dssp ------------TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----------SCEEEEETTTCCEEEE
T ss_pred ------------CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----------CCEEEEECCCCceEEE
Confidence 444332 22211 1236789999999988765544 3589999876553110
Q ss_pred ccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 365 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
. ... ...+...+..++|+|||+.| ++.+.++...||.+
T Consensus 336 ~-------~~~--------~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 336 L-------GTL--------QNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAF 373 (380)
T ss_dssp E-------CCS--------CSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEEC
T ss_pred E-------ecc--------cCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEec
Confidence 0 000 00011245678899999955 56667777777743
No 344
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.10 E-value=5.4e-11 Score=131.96 Aligned_cols=133 Identities=23% Similarity=0.249 Sum_probs=93.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCC-CCCCCChhhhhcCCCCcc
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYR-GSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~r-G~~~~g~~~~~~~~~~~~ 593 (771)
+.|++.+ .+|.|......++.|+||++|||++...............+.|++|+.+||| |..++......... +
T Consensus 95 ~edcl~l--nv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~---~ 169 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSR---G 169 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC---C
T ss_pred CCCCcEE--EEEECCCCCCCCCCCEEEEECCCcccCCCccccCHHHHHhcCCEEEEecCCCCccccCCCCCcccCc---c
Confidence 3455555 5788976544578999999999987654432211122334579999999999 43233222111122 2
Q ss_pred ccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhh--CCCceeEEEecCCccc
Q 004141 594 SQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCN 652 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~p~~~ 652 (771)
...+.|+.++++|+.++ ...|++||.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 170 n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 170 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 33478999999999875 34799999999999999999988875 3678999999998754
No 345
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.10 E-value=6.5e-09 Score=116.01 Aligned_cols=236 Identities=8% Similarity=-0.029 Sum_probs=139.7
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccC
Q 004141 105 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 183 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 183 (771)
.+||+|+.+ +.+.. ...+.+++ ..++....+...... ..+.|||||++|+..+.+
T Consensus 144 ~~~p~~~~~--vs~~~--d~~V~v~D~~t~~~~~~i~~g~~~----------~~v~~spdg~~l~v~~~d---------- 199 (543)
T 1nir_A 144 DLDLPNLFS--VTLRD--AGQIALVDGDSKKIVKVIDTGYAV----------HISRMSASGRYLLVIGRD---------- 199 (543)
T ss_dssp CCCGGGEEE--EEEGG--GTEEEEEETTTCCEEEEEECSTTE----------EEEEECTTSCEEEEEETT----------
T ss_pred ccCCCCEEE--EEEcC--CCeEEEEECCCceEEEEEecCccc----------ceEEECCCCCEEEEECCC----------
Confidence 478988533 33332 22455455 445555555433334 388899999988775321
Q ss_pred CCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc--cCCceeeccCCCCCCccceEEEec----CCCCCccE
Q 004141 184 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAP----LNEGLHQY 257 (771)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~~~~~~l~~~~~~~~~~~~~wsp----Dg~~~~~~ 257 (771)
..|.+||+ .++++... ++....+..++||| ||+.
T Consensus 200 ----------------------------------~~V~v~D~~~~t~~~~~~--i~~g~~p~~va~sp~~~~dg~~---- 239 (543)
T 1nir_A 200 ----------------------------------ARIDMIDLWAKEPTKVAE--IKIGIEARSVESSKFKGYEDRY---- 239 (543)
T ss_dssp ----------------------------------SEEEEEETTSSSCEEEEE--EECCSEEEEEEECCSTTCTTTE----
T ss_pred ----------------------------------CeEEEEECcCCCCcEEEE--EecCCCcceEEeCCCcCCCCCE----
Confidence 57999999 67765443 33444678899999 9996
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcce-ecCCC-----------Cccccceeec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-----------ISSAFFPRFS 325 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-----------~~~~~~p~~S 325 (771)
|+.... ....|.++|. .+++.. .+... ...+....+|
T Consensus 240 l~v~~~--------------~~~~v~v~D~-----------------~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 240 TIAGAY--------------WPPQFAIMDG-----------------ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEEE--------------ESSEEEEEET-----------------TTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEEEEc--------------cCCeEEEEec-----------------cccccceeecccCcccCccccccCCceEEEEEC
Confidence 655442 1236778887 555432 22211 1145678999
Q ss_pred CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004141 326 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 326 pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~ 405 (771)
|||+.+++.... ..+|+++|..+.+...++ .++ .+. .+....|+|||++++.
T Consensus 289 ~~~~~~~vs~~~----------~g~i~vvd~~~~~~l~~~-----~i~------~~~-------~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 289 HEHPEFIVNVKE----------TGKVLLVNYKDIDNLTVT-----SIG------AAP-------FLHDGGWDSSHRYFMT 340 (543)
T ss_dssp SSSSEEEEEETT----------TTEEEEEECTTSSSCEEE-----EEE------CCS-------SCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEECC----------CCeEEEEEecCCCcceeE-----Eec------cCc-------CccCceECCCCCEEEE
Confidence 999987665533 257999998775432110 000 011 2456789999998876
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCC-C---CceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 406 SSIWGSSQVIISVNVSSGELLRITPAE-S---NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~~tg~~~~l~~~~-~---~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+....+ .|..+|..++++....... . ......++++++.++++.+.. -..|.+.+..+
T Consensus 341 a~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTDP 402 (543)
T ss_dssp EEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeCC
Confidence 655444 4555899999877654321 1 111223467777776655422 23466666554
No 346
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.09 E-value=2.9e-09 Score=121.25 Aligned_cols=241 Identities=10% Similarity=0.049 Sum_probs=146.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCC----cceEEEecCCcccccccCCCcccceeecC--CCCeEEEE
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS----QLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~ 170 (771)
+.+...+|||||++||+..+ + ...+| ..+ ...+.+... .+. .+.+++||| ||++|+..
T Consensus 19 ~~v~~~~~spdg~~l~~~~~---~---~v~v~~~~~~~~~~~~~~~~~~h---~~~-----~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG---K---SAFVRCLDDGDSKVPPVVQFTGH---GSS-----VVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET---T---EEEEEECCSSCCSSCSEEEECTT---TTS-----CEEEEEECSSTTCCEEEEE
T ss_pred CceeEEEECCCCCEEEEecC---C---eEEEEECCCCCCccccceEEecC---CCc-----eEEEEEECcCCCCCEEEEe
Confidence 45788999999999999862 2 34444 333 333333221 111 026899999 99999886
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC--------ce-eeccCCCCCCc
Q 004141 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--------EV-QAVKGIPKSLS 241 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--------~~-~~l~~~~~~~~ 241 (771)
+. ...|.+||+.++ +. ..+ ......
T Consensus 85 ~~--------------------------------------------dg~v~vw~~~~~~~~~~~~~~~~~~~--~~~~~~ 118 (615)
T 1pgu_A 85 DE--------------------------------------------SGKVIVWGWTFDKESNSVEVNVKSEF--QVLAGP 118 (615)
T ss_dssp ET--------------------------------------------TSEEEEEEEEEEGGGTEEEEEEEEEE--ECCSSC
T ss_pred cC--------------------------------------------CCEEEEEeCCCCcccccccccccchh--hccccc
Confidence 43 257899998654 22 223 234456
Q ss_pred cceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccc
Q 004141 242 VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 321 (771)
Q Consensus 242 ~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 321 (771)
+..+.|+|||+. |+..+...+ ....|+.+|. +.....+..+...+..
T Consensus 119 v~~~~~s~~~~~----l~~~~~~~~-----------~~~~v~~~d~------------------~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 119 ISDISWDFEGRR----LCVVGEGRD-----------NFGVFISWDS------------------GNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEEECTTSSE----EEEEECCSS-----------CSEEEEETTT------------------CCEEEECCSCSSCEEE
T ss_pred EEEEEEeCCCCE----EEEeccCCC-----------CccEEEEEEC------------------CCcceeeecCCccEEE
Confidence 889999999998 887763211 1236777763 3445666677778899
Q ss_pred eeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccC-
Q 004141 322 PRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD- 399 (771)
Q Consensus 322 p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~D- 399 (771)
..|+|||+. |+..+.+ ..|.+||+.+++.... +....... ..+..++|+||
T Consensus 166 ~~~~~~~~~~l~~~~~d-----------~~v~vwd~~~~~~~~~----------~~~~~~~~------~~v~~~~~~~~~ 218 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDD-----------GSVVFYQGPPFKFSAS----------DRTHHKQG------SFVRDVEFSPDS 218 (615)
T ss_dssp EEECSSSSCEEEEEETT-----------TEEEEEETTTBEEEEE----------ECSSSCTT------CCEEEEEECSTT
T ss_pred EEECCCCCcEEEEEeCC-----------CcEEEEeCCCcceeee----------ecccCCCC------ceEEEEEECCCC
Confidence 999999984 5444433 3588888766443111 10000000 02456789999
Q ss_pred CCEEEEEeeeCCeeEEEEEECCCCcEEEec-----CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 400 GCTMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 400 g~~l~~~~~~~~~~~l~~~d~~tg~~~~l~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
++.|+ +...++. |..+|+.+++..... .....+....|+ +++.++....+ ..+.+.++.+
T Consensus 219 ~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~ 283 (615)
T 1pgu_A 219 GEFVI-TVGSDRK--ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTT 283 (615)
T ss_dssp CCEEE-EEETTCC--EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTT
T ss_pred CCEEE-EEeCCCe--EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCC
Confidence 88664 4444444 555688888766554 333445566778 88877665532 3466666543
No 347
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=1.5e-08 Score=104.27 Aligned_cols=251 Identities=10% Similarity=0.023 Sum_probs=144.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...|+|+|||+.|+|+.... ..++.+..++....+....... .++.|+|||+.++.. .
T Consensus 47 ~egp~~~~~g~~l~~~d~~~---~~i~~~~~~g~~~~~~~~~~~~----------~gl~~d~dG~l~v~~--~------- 104 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVG---RRVLGWREDGTVDVLLDATAFT----------NGNAVDAQQRLVHCE--H------- 104 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTT---TEEEEEETTSCEEEEEESCSCE----------EEEEECTTSCEEEEE--T-------
T ss_pred ccCCeEeCCCCEEEEEECCC---CEEEEEeCCCCEEEEeCCCCcc----------ceeeECCCCCEEEEE--C-------
Confidence 45799999999998875433 3466666544443333322222 588999999844332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCccE
Q 004141 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~~ 257 (771)
....|++++.+ ++.+.+..... ...+..++++|||+
T Consensus 105 -----------------------------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~----- 143 (305)
T 3dr2_A 105 -----------------------------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA----- 143 (305)
T ss_dssp -----------------------------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-----
T ss_pred -----------------------------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-----
Confidence 12467778776 55555421111 12356789999997
Q ss_pred EEEEeecCcc--eeeeeee-eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEE
Q 004141 258 LVFVGWSSET--RKLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 258 l~~~~~~~~~--~~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+|+....+. ...+... .......||++|. ++++.+.+. .......++|||||+.|++.
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~-----------------~~g~~~~~~-~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP-----------------DGSPLQRMA-DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS-----------------SSCCCEEEE-EESSEEEEEECTTSSEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcC-----------------CCCcEEEEe-cCCCCcceEEcCCCCEEEEE
Confidence 7775210000 0000000 0012347999997 677777665 44445678999999998877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~ 414 (771)
..... ......|+++++.+++ +.. ....... .. .....+++.+||+ |+++. . ..
T Consensus 206 ~~~~~-----~~~~~~i~~~~~~~~~---l~~-~~~~~~~-----~~-------~~pdgi~~d~~G~-lwv~~-~---~g 259 (305)
T 3dr2_A 206 QTPEQ-----GHGSVEITAFAWRDGA---LHD-RRHFASV-----PD-------GLPDGFCVDRGGW-LWSSS-G---TG 259 (305)
T ss_dssp ECCC--------CCCEEEEEEEETTE---EEE-EEEEECC-----SS-------SCCCSEEECTTSC-EEECC-S---SE
T ss_pred ecCCc-----CCCCCEEEEEEecCCC---ccC-CeEEEEC-----CC-------CCCCeEEECCCCC-EEEec-C---Cc
Confidence 65420 0112569999987644 111 1111110 00 1234667889998 65544 2 24
Q ss_pred EEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004141 415 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~ 464 (771)
|++++.++..+..+..... .....|+++++.|+++.+. .||+++
T Consensus 260 v~~~~~~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~ 303 (305)
T 3dr2_A 260 VCVFDSDGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLP 303 (305)
T ss_dssp EEEECTTSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEE
T ss_pred EEEECCCCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEE
Confidence 8889986666666654443 4567888888888877653 566654
No 348
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.08 E-value=1.1e-07 Score=101.73 Aligned_cols=259 Identities=13% Similarity=0.079 Sum_probs=142.7
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCC---CeEEEEec
Q 004141 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDE---TLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg---~~la~~~~ 172 (771)
..+...+|+| +++.++.....+ .+.+| ..++........... ..+.|+|++ ..|+...
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 163 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFNFEETV----------YSHHMSPVSTKHCLVAVGT- 163 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEECSSCE----------EEEEECSSCSSCCEEEEEE-
T ss_pred CcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceeccCCCce----------eeeEeecCCCCCcEEEEEc-
Confidence 5688999999 666776654433 45566 344444444433333 477788854 4666643
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004141 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
....|.+||+.+++..... ......+..+.|+|+++
T Consensus 164 -------------------------------------------~~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 164 -------------------------------------------RGPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPRYD 199 (408)
T ss_dssp -------------------------------------------SSSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSSCT
T ss_pred -------------------------------------------CCCeEEEEeCCCcceeeee-cCCCCcEEEEEECCCCC
Confidence 2357899999887654431 33455688999999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEE
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 332 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~ 332 (771)
. +++++. .+..|.++|+......-..+..............+..+...+....|+|||+.|+
T Consensus 200 ~----ll~~~~--------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 200 Y----ILATAS--------------ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp T----EEEEEE--------------TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred c----EEEEEc--------------CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 8 777663 2236777776210000000000000000000111134555688899999999998
Q ss_pred EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCC
Q 004141 333 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 411 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~Dg~~l~~~~~~~~ 411 (771)
..+.+. .|.+||+.+++.......... .... ......+. ..+..+++.. .++
T Consensus 262 ~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~~~~~~-~~~ 314 (408)
T 4a11_B 262 TVGTDN-----------RMRLWNSSNGENTLVNYGKVC---------NNSK------KGLKFTVSCGCSSEFVFVP-YGS 314 (408)
T ss_dssp EEETTS-----------CEEEEETTTCCBCCCCCCCCC---------CCCS------SCCCCEECCSSSSCEEEEE-ETT
T ss_pred EecCCC-----------eEEEEECCCCccceecccccc---------cccc------ccceeEEecCCCceEEEEe-cCC
Confidence 777553 489999988765332211100 0000 00111222 2233344443 344
Q ss_pred eeEEEEEECCCCcEEEecC-CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 412 SQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.|..+|+.+++...... ....+....|+++++.|+....+ ..+.+.++...
T Consensus 315 --~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iw~~~~~ 366 (408)
T 4a11_B 315 --TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD----CNILAWVPSLY 366 (408)
T ss_dssp --EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEEECC-
T ss_pred --EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC----CeEEEEeCCCC
Confidence 56666888887665443 44456667899999887755432 34666666543
No 349
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.08 E-value=6.5e-11 Score=127.49 Aligned_cols=112 Identities=12% Similarity=0.044 Sum_probs=80.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||.+.+. ...|.. .+..|++ .||.|+++|+||.+ .+...... .......+|+.+.++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g---~s~~~~~~-~~~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGS---KAQYSQAS-QNIRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHH---TSCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECcccc---CccchhhH-hhHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999976653 235655 6667766 79999999999843 32110000 0001124678888888876544
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.+++.|+||||||.+|+.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 567899999999999999999999999999999888764
No 350
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.08 E-value=5.2e-09 Score=111.03 Aligned_cols=239 Identities=11% Similarity=0.101 Sum_probs=140.7
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCC--CCeEEEEecCCCCCC
Q 004141 48 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESP 124 (771)
Q Consensus 48 ~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~ 124 (771)
..++||+.|+... ..+.+.+|++........ .+.. ....+...+|+|+ |++|+.....+
T Consensus 18 ~~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~l~s~~~dg---- 79 (379)
T 3jrp_A 18 VLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCSYDG---- 79 (379)
T ss_dssp EECSSSSEEEEEE---------TTSCEEEEEEETTEEEEEEEECC-----CSSCEEEEEECCGGGCSEEEEEETTS----
T ss_pred EEcCCCCEEEEEE---------CCCcEEEEecCCCcceeeeEecC-----CCCcEEEEEeCCCCCCCEEEEeccCC----
Confidence 3467888877653 224566666643222221 2211 2256888999988 88888765532
Q ss_pred eEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCC
Q 004141 125 IQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 200 (771)
Q Consensus 125 ~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (771)
.+.+| ..+....+..... ..+ .+..+.|+|+ |+.|+..+.
T Consensus 80 -~v~iwd~~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~~~l~~~~~---------------------------- 123 (379)
T 3jrp_A 80 -KVLIWKEENGRWSQIAVHAV-HSA------SVNSVQWAPHEYGPLLLVASS---------------------------- 123 (379)
T ss_dssp -CEEEEEEETTEEEEEEEECC-CSS------CEEEEEECCGGGCSEEEEEET----------------------------
T ss_pred -EEEEEEcCCCceeEeeeecC-CCc------ceEEEEeCCCCCCCEEEEecC----------------------------
Confidence 33444 2333222222211 111 2268999999 888888643
Q ss_pred cccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEec-------------CCCCCccEEEEEeec
Q 004141 201 QGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFVGWS 264 (771)
Q Consensus 201 ~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wsp-------------Dg~~~~~~l~~~~~~ 264 (771)
...|.+||+.++.. ..+ ......+..+.|+| |++. |+..+
T Consensus 124 ----------------d~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-- 179 (379)
T 3jrp_A 124 ----------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG-- 179 (379)
T ss_dssp ----------------TSEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCCC----------CTTCE----EEEEE--
T ss_pred ----------------CCcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCccccccccccCCCCCCE----EEEEe--
Confidence 25788999887632 223 23445678899999 5776 66554
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCccccceeecCC---CCEEEEEec
Q 004141 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPD---GKFLVFLSA 336 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpD---G~~l~f~~~ 336 (771)
.+..|+++|+ .++. ...+..+...+..++|+|| |+.|+..+.
T Consensus 180 -------------~dg~i~i~d~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 180 -------------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp -------------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred -------------CCCeEEEEEe-----------------cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 2236777776 2222 2345556677899999999 788777665
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+. .|.+||+.++..... ..+... .. ....+..++|+|||+.|+.. ..++...+|
T Consensus 230 dg-----------~i~iwd~~~~~~~~~-------~~~~~~---~~----~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw 283 (379)
T 3jrp_A 230 DR-----------TCIIWTQDNEQGPWK-------KTLLKE---EK----FPDVLWRASWSLSGNVLALS-GGDNKVTLW 283 (379)
T ss_dssp TS-----------CEEEEEESSTTSCCE-------EEESSS---SC----CSSCEEEEEECSSSCCEEEE-ESSSSEEEE
T ss_pred CC-----------EEEEEeCCCCCccce-------eeeecc---cc----CCCcEEEEEEcCCCCEEEEe-cCCCcEEEE
Confidence 53 488888877542110 000000 00 01134567899999976544 457777888
Q ss_pred EEEC
Q 004141 417 SVNV 420 (771)
Q Consensus 417 ~~d~ 420 (771)
.++.
T Consensus 284 ~~~~ 287 (379)
T 3jrp_A 284 KENL 287 (379)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 7774
No 351
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.08 E-value=4.3e-11 Score=132.19 Aligned_cols=131 Identities=19% Similarity=0.205 Sum_probs=89.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch--HHHH-HH-HHCCcEEEEECCCCCC-CCC--hhhhh
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FL-SSVGYSLLIVNYRGSL-GFG--EEALQ 586 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~--~~~~-~l-a~~G~~Vv~~d~rG~~-~~g--~~~~~ 586 (771)
+.|.+. ..+|.|......++.|+||++|||++...... +. ..+. .+ ...|++|+.+|||... ++. .+...
T Consensus 94 sedcl~--l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 171 (534)
T 1llf_A 94 SEDCLT--INVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA 171 (534)
T ss_dssp CSCCCE--EEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeE--EEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc
Confidence 344544 45888975444567899999999987655432 21 1222 22 2468999999999632 111 11111
Q ss_pred cCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--------CCceeEEEecCCc
Q 004141 587 SLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPL 650 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~~~v~~~p~ 650 (771)
.. .+...+.|+.++++|+.++ ...|++||.|+|+|+||.++..++... +.+|+++|+.+|.
T Consensus 172 ~~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 172 EG---SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HT---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cC---CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 11 2334588999999999875 336999999999999999888776653 4679999999985
No 352
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.07 E-value=2.4e-09 Score=115.95 Aligned_cols=266 Identities=15% Similarity=0.078 Sum_probs=150.7
Q ss_pred eeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCccccccc
Q 004141 71 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVY 150 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 150 (771)
.+.+++|++.++ +..++... ......+...+|||||++||..+... .+.+|+-...+.+..... ..+
T Consensus 124 d~tV~lWd~~tg--~~~~~~~~--~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~~-h~~--- 190 (420)
T 4gga_A 124 DNSVYLWSASSG--DILQLLQM--EQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTS-HSA--- 190 (420)
T ss_dssp TTEEEEEETTTC--CEEEEEEC--CSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC-CSS---
T ss_pred CCEEEEEECCCC--CEEEEEEe--cCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeC-CCC---
Confidence 356777776432 33332211 11124588999999999998776543 456663222222222211 111
Q ss_pred CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc
Q 004141 151 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 229 (771)
Q Consensus 151 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~ 229 (771)
...++++|++.|+..+.+.... .|..... ........+........+.++......+.....+.+|+..+++
T Consensus 191 -----~v~~~s~~~~~l~sgs~d~~i~--~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 191 -----RVGSLSWNSYILSSGSRSGHIH--HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp -----CEEEEEEETTEEEEEETTSEEE--EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred -----ceEEEeeCCCEEEEEeCCCcee--EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 1334566777777766544221 1111000 0000111122222334456665555556667889999998765
Q ss_pred eeec---cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004141 230 VQAV---KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 230 ~~~l---~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
.... ........+...+|+|++.. +++++-. ..+..|.++|+ .+
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~----~la~~~g------------s~D~~I~iwd~-----------------~t 310 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSN----VLATGGG------------TSDRHIRIWNV-----------------CS 310 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTT----EEEEEEC------------TTTCEEEEEET-----------------TT
T ss_pred ccceeeeeecccCCceeeeeeCCCccc----EEEEEee------------cCCCEEEEEeC-----------------Cc
Confidence 3211 00234456778999999998 8776421 12347888898 66
Q ss_pred CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccc
Q 004141 307 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 386 (771)
Q Consensus 307 ~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 386 (771)
+...........+.+..|+|+++.|+..+... ...|++||+.+++......+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~---------d~~I~iwd~~~~~~v~~l~g------------------- 362 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYKELISGHGFA---------QNQLVIWKYPTMAKVAELKG------------------- 362 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTTEEEEEECTT---------TCCEEEEETTTCCEEEEECC-------------------
T ss_pred cccceeeccccceeeeeecCCCCeEEEEEecC---------CCEEEEEECCCCcEEEEEcC-------------------
Confidence 66544444555678899999999998876432 24699999887654211111
Q ss_pred ccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 387 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 387 ~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
+...+..++|||||+.| ++...++...||.+
T Consensus 363 H~~~V~~l~~spdg~~l-~S~s~D~tvriWdv 393 (420)
T 4gga_A 363 HTSRVLSLTMSPDGATV-ASAAADETLRLWRC 393 (420)
T ss_dssp CSSCEEEEEECTTSSCE-EEEETTTEEEEECC
T ss_pred CCCCEEEEEEcCCCCEE-EEEecCCeEEEEEC
Confidence 11235577899999865 56667777777754
No 353
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.07 E-value=8.9e-08 Score=101.03 Aligned_cols=121 Identities=7% Similarity=-0.027 Sum_probs=72.0
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc-cCC-CCCcccccCCCCCCccccC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC-AEG-DCFPGLYSSSILSNPWLSD 399 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-~~f~g~~~~~~~~~~~s~D 399 (771)
..++|||+.++|.+.. ..++++|+.++....+. ...+... ... ...| .....++++||
T Consensus 205 ~~~~~~g~~~~~~~~~-----------~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~~p----~g~~~~a~~~d 264 (361)
T 2oiz_A 205 IAPALDKDKAHFVSYY-----------GNVYSADFSGDEVKVDG-----PWSLLNDEDKAKNWVP----GGYNLVGLHRA 264 (361)
T ss_dssp SCCEECSSEEEEEBTT-----------SEEEEEECSSSSCEEEE-----EEESCCHHHHHTTCEE----CCSSCEEEETT
T ss_pred EEecccCCEEEEEeCC-----------CeEEEEEecCCCceecc-----cccccCcccccccccc----CCeeEEEEecC
Confidence 4558999998887743 25899998765432110 0000000 000 0001 12234678999
Q ss_pred CCEEEEEeeeC--------CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 400 GCTMLLSSIWG--------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 400 g~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
++++|+..... ....++.||++++++..-..... .....|++||+.|+.+. . ..|.+++..++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-G----GNVNVYDISQP 335 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-S----SCEEEEECSSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-C----CeEEEEECCCC
Confidence 99888765411 23579999999988665433333 56679999999776433 2 66888876544
No 354
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.05 E-value=7.9e-09 Score=107.09 Aligned_cols=233 Identities=9% Similarity=0.056 Sum_probs=131.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecC--CCCeEEEEecCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~~~~~ 174 (771)
..+...+|||||++||..+... ...+|+ .+....+..+. +..+. +..++|+| +|+.|+..+.+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~-gH~~~------V~~v~~~~~~~~~~l~s~s~D- 80 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDR-----SVKIFDVRNGGQILIADLR-GHEGP------VWQVAWAHPMYGNILASCSYD- 80 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEE-CCSSC------EEEEEECCGGGSSCEEEEETT-
T ss_pred CeEEEeeEcCCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEc-CCCcc------EEEEEeCCCCCCCEEEEEECC-
Confidence 4578899999999998776543 455552 22222222221 11122 26899987 48888876433
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC-
Q 004141 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD- 250 (771)
..|.+||+.+++. ..+ ......+..++|+||
T Consensus 81 -------------------------------------------~~v~iWd~~~~~~~~~~~~--~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 81 -------------------------------------------RKVIIWREENGTWEKSHEH--AGHDSSVNSVCWAPHD 115 (316)
T ss_dssp -------------------------------------------SCEEEECCSSSCCCEEEEE--CCCSSCCCEEEECCTT
T ss_pred -------------------------------------------CEEEEEECCCCcceEEEEc--cCCCCceEEEEECCCC
Confidence 5688899887642 223 234456889999998
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-c---ceecCCCCccccceeec
Q 004141 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P---VVNLTESISSAFFPRFS 325 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~---~~~lt~~~~~~~~p~~S 325 (771)
|+. |+..+ .+..|.++|+ .++ . ...+..+...+....|+
T Consensus 116 ~g~~----lasgs---------------~D~~i~lwd~-----------------~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 116 YGLI----LACGS---------------SDGAISLLTY-----------------TGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp TCSC----EEEEC---------------SSSCEEEEEE-----------------CSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred CCcE----EEEEc---------------CCCCEEEEec-----------------CCCCCcceeeeeccccCCcceEEEc
Confidence 665 66554 2235677776 332 1 12333445567888999
Q ss_pred CCC-----------------CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccccc
Q 004141 326 PDG-----------------KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 326 pDG-----------------~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
|++ +.|+..+.+ ..|.+||+.+++... .... +.+ +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----------~~v~lWd~~~~~~~~-------~~~~--------l~~-h~ 212 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCD-----------NLIKLWKEEEDGQWK-------EEQK--------LEA-HS 212 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTT-----------SBCCEEEECTTSCEE-------EEEC--------CBC-CS
T ss_pred cccCCccccccccccCccccceEEEecCC-----------CeEEEEEeCCCCccc-------eeee--------ccc-CC
Confidence 983 444433322 347777775432100 0000 010 11
Q ss_pred CCCCCCccccCC---CEEEEEeeeCCeeEEEEEECCC-Cc--EEEecCCCCCceeeEEeecCCEEEEEEe
Q 004141 389 SSILSNPWLSDG---CTMLLSSIWGSSQVIISVNVSS-GE--LLRITPAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 389 ~~~~~~~~s~Dg---~~l~~~~~~~~~~~l~~~d~~t-g~--~~~l~~~~~~~~~~~~s~dg~~l~~~~~ 452 (771)
..+..++|+|++ ..++++...++...||.++... ++ .+.+......+....|+|+++.|+....
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 134567899987 2356677777777777443210 11 1223222334556788999987765543
No 355
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.05 E-value=8.9e-09 Score=105.60 Aligned_cols=242 Identities=11% Similarity=0.109 Sum_probs=137.9
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCCC--CCeEEEEecCCCCCCeE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~~ 126 (771)
++||++|+-.. ..+.+.++++.....+. ..+.. ..+.+...+|+|+ |+.||..+... .
T Consensus 18 s~~g~~las~s---------~D~~v~iw~~~~~~~~~~~~l~g-----H~~~V~~v~~s~~~~g~~l~s~s~D~-----~ 78 (297)
T 2pm7_B 18 DYYGKRMATCS---------SDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCSYDG-----K 78 (297)
T ss_dssp CTTSSEEEEEE---------TTSCEEEEEBCSSCBCCCEEECC-----CSSCEEEEEECCGGGCSEEEEEETTT-----E
T ss_pred CCCCCEEEEEe---------CCCEEEEEecCCCCcEEEEEEcc-----ccCCeEEEEecCCCcCCEEEEEcCCC-----E
Confidence 56888777543 33566776664332121 22221 2256888999874 88888766543 5
Q ss_pred EEEec--CCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004141 127 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
..+|+ .+....+.... ...+ .+.+++|+|+ |+.|+..+.
T Consensus 79 v~iWd~~~~~~~~~~~~~-~h~~------~v~~v~~~p~~~g~~l~s~s~------------------------------ 121 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHA-VHSA------SVNSVQWAPHEYGPMLLVASS------------------------------ 121 (297)
T ss_dssp EEEEEBSSSCBCCCEEEC-CCSS------CEEEEEECCGGGCSEEEEEET------------------------------
T ss_pred EEEEEcCCCceEEEEEee-cCCC------ceeEEEeCcCCCCcEEEEEEC------------------------------
Confidence 56662 22211221111 1111 2268999998 888877543
Q ss_pred cccCCcCcccCCccCceEEEEEccCCc---eeeccCCCCCCccceEEEecCC-------------CCCccEEEEEeecCc
Q 004141 203 DWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAPLN-------------EGLHQYLVFVGWSSE 266 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~---~~~l~~~~~~~~~~~~~wspDg-------------~~~~~~l~~~~~~~~ 266 (771)
...|.+||+.++. ...+ ......+..+.|+|++ +. |+..+
T Consensus 122 --------------d~~v~~wd~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~----l~sgs---- 177 (297)
T 2pm7_B 122 --------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG---- 177 (297)
T ss_dssp --------------TSEEEEEEBCSSSCBCCEEE--ECCSSCEEEEEECCCC------------CCE----EEEEE----
T ss_pred --------------CCcEEEEEecCCCceeeeee--ecccCccceEeecCCcccccccCCCCCCcce----EEEEc----
Confidence 2578888887653 2233 2334467788999984 33 44443
Q ss_pred ceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCccccceeecCCC---CEEEEEecCC
Q 004141 267 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPDG---KFLVFLSAKS 338 (771)
Q Consensus 267 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpDG---~~l~f~~~~~ 338 (771)
.+..|.++|+ .++. ...|..+...+...+||||+ ++|+..+.+.
T Consensus 178 -----------~D~~v~lwd~-----------------~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 178 -----------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp -----------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred -----------CCCcEEEEEE-----------------cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 2235666666 2222 23566677789999999996 6777666553
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.++..... ..+.. ...++ ..+..++|+|||+.| ++...++...||..
T Consensus 230 -----------~v~iWd~~~~~~~~~-------~~~~~---~~~~~----~~v~~~~~s~~g~~l-as~~~D~~v~lw~~ 283 (297)
T 2pm7_B 230 -----------TCIIWTQDNEQGPWK-------KTLLK---EEKFP----DVLWRASWSLSGNVL-ALSGGDNKVTLWKE 283 (297)
T ss_dssp -----------CEEEEEESSTTSCCE-------EEESS---SSCCS----SCEEEEEECSSSCCE-EEEETTSCEEEEEE
T ss_pred -----------cEEEEEeCCCCCccc-------eeeee---cccCC----CcEEEEEECCCCCEE-EEEcCCCcEEEEEE
Confidence 477788765431100 00000 00111 134567899999866 45556778888877
Q ss_pred ECCCCcEE
Q 004141 419 NVSSGELL 426 (771)
Q Consensus 419 d~~tg~~~ 426 (771)
+.. |...
T Consensus 284 ~~~-g~w~ 290 (297)
T 2pm7_B 284 NLE-GKWE 290 (297)
T ss_dssp CTT-SCEE
T ss_pred CCC-CcEE
Confidence 653 4443
No 356
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.05 E-value=7.3e-09 Score=106.66 Aligned_cols=271 Identities=14% Similarity=0.101 Sum_probs=154.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+| |+|++|+.....+ .+.+| ..+........... .+..+.|+|||+.|+..+.+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTGQG---------FLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEECSS---------CEEEEEEETTTTEEEEEETTSCE
T ss_pred CCcEEEEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecCCc---------cEEEEEECCCCCEEEEecCCCeE
Confidence 45778889 9999988765543 45556 23333333332111 12689999999999988766542
Q ss_pred CCCCccCCCCCC---CCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCC
Q 004141 177 SKPTFSLGSTKG---GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNE 252 (771)
Q Consensus 177 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~ 252 (771)
. .|....... ......+......+.| +....+++.....|.+|| .......+ ......+..+.|+| +++
T Consensus 84 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 84 N--GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNL--QAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp E--EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEE--ECCSSCEEEEEEEETTTT
T ss_pred E--EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEec--ccCCCceeEEEEccCCCC
Confidence 2 122111111 1111122222223344 333455566678999999 33333444 33455677889988 777
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEE
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l 331 (771)
. |+..+ .+..|.++|. . .....+.. ....+....|+|+|+ |
T Consensus 157 ~----l~~~~---------------~d~~i~i~d~-----------------~-~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 157 K----FLTAS---------------ADKTIKLWQN-----------------D-KVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------T-EEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred E----EEEEE---------------CCCCEEEEec-----------------C-ceEEEEeccCcccEEEEEEcCCCe-E
Confidence 5 66554 2336777774 2 23333443 566788999999999 6
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004141 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~ 411 (771)
+..+.+ ..|.+||+.+++...... . ....+..++|+||++ | ++...++
T Consensus 199 ~~~~~d-----------g~i~i~d~~~~~~~~~~~----------~---------~~~~i~~~~~~~~~~-l-~~~~~dg 246 (313)
T 3odt_A 199 ISCSND-----------GLIKLVDMHTGDVLRTYE----------G---------HESFVYCIKLLPNGD-I-VSCGEDR 246 (313)
T ss_dssp EEEETT-----------SEEEEEETTTCCEEEEEE----------C---------CSSCEEEEEECTTSC-E-EEEETTS
T ss_pred EEccCC-----------CeEEEEECCchhhhhhhh----------c---------CCceEEEEEEecCCC-E-EEEecCC
Confidence 555443 358999987765321110 0 011345678999994 4 3444444
Q ss_pred eeEEEEEECCCCcEEEec-CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 412 SQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
. |..+|+.+++..... .....+....|+++++ ++. .+. -..+.+.++.++
T Consensus 247 ~--v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~ 297 (313)
T 3odt_A 247 T--VRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSS---DNLVRIFSQEKS 297 (313)
T ss_dssp E--EEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EET---TSCEEEEESCGG
T ss_pred E--EEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeC---CCcEEEEeCCCC
Confidence 4 556688888765443 3333556678889988 333 322 235777776544
No 357
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.05 E-value=1.1e-08 Score=111.07 Aligned_cols=180 Identities=16% Similarity=0.101 Sum_probs=108.4
Q ss_pred ceEEEEEccCCce--------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004141 218 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 218 ~~l~v~d~~~~~~--------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
..|.+||+.++.. ..+ ......+..++|+|++.. +++++. ....|+++|+
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~s~~--------------~dg~i~i~d~-- 261 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHES----LFGSVA--------------DDQKLMIWDT-- 261 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEET--
T ss_pred CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCC----EEEEEe--------------CCCeEEEEEC--
Confidence 5788999877321 222 344456888999997766 666552 3347888998
Q ss_pred ccchhhhhhhhcCCCCCC----cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004141 290 YKSEASELELKESSSEDL----PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~----~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
..+ ....+..+...+....|+|+|+.++.+...+ ..|.+||+.+......+
T Consensus 262 ---------------~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d----------g~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 262 ---------------RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD----------KTVALWDLRNLKLKLHS 316 (430)
T ss_dssp ---------------TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEE
T ss_pred ---------------CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC----------CeEEEEeCCCCCCCeEE
Confidence 332 2344445666788999999999765555443 35889998764321100
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC------------CcEEEecCC-C
Q 004141 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS------------GELLRITPA-E 432 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~t------------g~~~~l~~~-~ 432 (771)
+.. ....+..++|+|+++.++++...++...||.++..+ .++...... .
T Consensus 317 ---------~~~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 378 (430)
T 2xyi_A 317 ---------FES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 378 (430)
T ss_dssp ---------EEC---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS
T ss_pred ---------eec---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC
Confidence 000 011345778999998888888777776777543211 133333322 2
Q ss_pred CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004141 433 SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 433 ~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~ 465 (771)
..+....|++++++++++.+.- ..|.+.++
T Consensus 379 ~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~ 408 (430)
T 2xyi_A 379 AKISDFSWNPNEPWIICSVSED---NIMQVWQM 408 (430)
T ss_dssp SCEEEEEECSSSTTEEEEEETT---SEEEEEEE
T ss_pred CCceEEEECCCCCCEEEEEECC---CCEEEeEc
Confidence 3456678889888555555432 34555554
No 358
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.04 E-value=3.5e-10 Score=124.06 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=92.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-chHHHHHHHHCC-cEEEEECCCC-CCCCChhhhhc--CC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSVG-YSLLIVNYRG-SLGFGEEALQS--LP 589 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~~~~~~la~~G-~~Vv~~d~rG-~~~~g~~~~~~--~~ 589 (771)
+.|++.+ .+|.|.. ..++.|+||++|||++...... .......|+++| ++|+.+|||. ..||+...... ..
T Consensus 81 ~edcl~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~ 156 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAY 156 (498)
T ss_dssp BSCCCEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGG
T ss_pred CCCCcEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccc
Confidence 4456555 4667862 4567899999999986543332 222345677666 9999999993 11233221100 01
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCccc
Q 004141 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 652 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~~ 652 (771)
...+...+.|+.++++|+.++ ...|++||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 123344588999999999886 236899999999999999998887753 467999999998754
No 359
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=4.3e-08 Score=102.23 Aligned_cols=258 Identities=15% Similarity=0.110 Sum_probs=147.6
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|+|||+ |+++... ...++.++ .+++.+.+... ...+ .++.|+|||+.++......
T Consensus 47 ~~~~~~~~~g~-l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~----------~~i~~~~dg~l~v~~~~~~---- 108 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVF---EGNIFKINPETKEIKRPFVSHKANP----------AAIKIHKDGRLFVCYLGDF---- 108 (333)
T ss_dssp EEEEEECTTSC-EEEEETT---TCEEEEECTTTCCEEEEEECSSSSE----------EEEEECTTSCEEEEECTTS----
T ss_pred ccCcEECCCCC-EEEEECC---CCEEEEEeCCCCcEEEEeeCCCCCc----------ceEEECCCCcEEEEeCCCC----
Confidence 46799999998 5444332 23577776 45555554422 2222 5899999997444321110
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
.....|+++|.+++..+.+ ........+..+.++|||+
T Consensus 109 ------------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~----- 147 (333)
T 2dg1_A 109 ------------------------------------KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG----- 147 (333)
T ss_dssp ------------------------------------SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-----
T ss_pred ------------------------------------CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-----
Confidence 0125799999998887643 1111223567889999996
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|++....... ......||+++. ++++.+.+.........+.|+|||+.|++....
T Consensus 148 l~v~~~~~~~--------~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 202 (333)
T 2dg1_A 148 FYFTDFRGYS--------TNPLGGVYYVSP-----------------DFRTVTPIIQNISVANGIALSTDEKVLWVTETT 202 (333)
T ss_dssp EEEEECCCBT--------TBCCEEEEEECT-----------------TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEeccccc--------cCCCceEEEEeC-----------------CCCEEEEeecCCCcccceEECCCCCEEEEEeCC
Confidence 6665532100 012347999987 666666554433346678999999988776543
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004141 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 417 (771)
...|+++|+.+.+............. +++. ..+..+++++||+ |++..... ..|++
T Consensus 203 ----------~~~i~~~d~~~~g~~~~~~~~~~~~~---------~~~~--~~~~~i~~d~~G~-l~v~~~~~--~~v~~ 258 (333)
T 2dg1_A 203 ----------ANRLHRIALEDDGVTIQPFGATIPYY---------FTGH--EGPDSCCIDSDDN-LYVAMYGQ--GRVLV 258 (333)
T ss_dssp ----------GTEEEEEEECTTSSSEEEEEEEEEEE---------CCSS--SEEEEEEEBTTCC-EEEEEETT--TEEEE
T ss_pred ----------CCeEEEEEecCCCcCcccccceEEEe---------cCCC--CCCCceEECCCCC-EEEEEcCC--CEEEE
Confidence 24689999864321100000000000 0000 0123467889987 55554322 36777
Q ss_pred EECCCCcEEEecCCCC------CceeeEEeecCCEEEEEEeCCC--CCCeEEEEEec
Q 004141 418 VNVSSGELLRITPAES------NFSWSLLTLDGDNIIAVSSSPV--DVPQVKYGYFV 466 (771)
Q Consensus 418 ~d~~tg~~~~l~~~~~------~~~~~~~s~dg~~l~~~~~~~~--~p~~l~~~~~~ 466 (771)
++.++..+..+..... ......|++|++.|+++..... ....||.++..
T Consensus 259 ~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 259 FNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp ECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 8886555555543321 2455678889888888776543 23456666643
No 360
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.04 E-value=3.9e-08 Score=100.79 Aligned_cols=243 Identities=12% Similarity=0.068 Sum_probs=142.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...|.|+|++..|+++... ...++.++..+...........+ .++.|+|||+ |+.. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~~----------~~i~~~~dG~-l~v~-~-------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP---AKKVCRWDSFTKQVQRVTMDAPV----------SSVALRQSGG-YVAT-I-------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEETTTCCEEEEECSSCE----------EEEEEBTTSS-EEEE-E--------
T ss_pred ccCCeEECCCCEEEEEECC---CCEEEEEECCCCcEEEEeCCCce----------EEEEECCCCC-EEEE-E--------
Confidence 3479999999888877542 34577777333333344433333 5889999999 3332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCccE
Q 004141 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~~ 257 (771)
...|+++|.++++.+.+..... ...+..++++|||+
T Consensus 72 ------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~----- 110 (297)
T 3g4e_A 72 ------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR----- 110 (297)
T ss_dssp ------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-----
T ss_pred ------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-----
Confidence 1478999999888776621111 12456789999997
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|++.......... ........||+++. + ++...+.........++|||||+.|++....
T Consensus 111 l~~~~~~~~~~~~---~~~~~~~~l~~~d~-----------------~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 111 YFAGTMAEETAPA---VLERHQGALYSLFP-----------------D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEEEECCSBTT---BCCTTCEEEEEECT-----------------T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred EEEecCCcccccc---cccCCCcEEEEEEC-----------------C-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 6666532211000 00012347898885 3 4444444333445678999999998877654
Q ss_pred CCCCCCCccccccceeeecC--CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 338 SSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
. ..|++++++ ++.. . ....+..+ ..... .+..+++.+||+ |+++.... ..|
T Consensus 170 ~----------~~i~~~~~d~~~G~~---~-~~~~~~~~---~~~~~-------~p~g~~~d~~G~-lwva~~~~--~~v 222 (297)
T 3g4e_A 170 S----------YSVDAFDYDLQTGQI---S-NRRSVYKL---EKEEQ-------IPDGMCIDAEGK-LWVACYNG--GRV 222 (297)
T ss_dssp G----------TEEEEEEECTTTCCE---E-EEEEEEEC---CGGGC-------EEEEEEEBTTSC-EEEEEETT--TEE
T ss_pred C----------CcEEEEeccCCCCcc---c-CcEEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEcCC--CEE
Confidence 2 468888874 3331 1 00001110 00001 123567888986 65554332 358
Q ss_pred EEEECCCCcEEE-ecCCCCCceeeEEe-ecCCEEEEEEeCCC
Q 004141 416 ISVNVSSGELLR-ITPAESNFSWSLLT-LDGDNIIAVSSSPV 455 (771)
Q Consensus 416 ~~~d~~tg~~~~-l~~~~~~~~~~~~s-~dg~~l~~~~~~~~ 455 (771)
+++|.++|++.. +...........|+ +|++.|+++.....
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 889998787654 43333345567787 78888888776543
No 361
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.03 E-value=7.4e-09 Score=112.43 Aligned_cols=147 Identities=14% Similarity=0.162 Sum_probs=91.8
Q ss_pred ceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004141 218 PSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|++||+.++. ...+ ......+..+.|+|+++. +++++. ....|.++|+.
T Consensus 254 g~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~----~l~tg~--------------~dg~v~vwd~~----- 308 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEF----ILATGS--------------ADKTVALWDLR----- 308 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEETT-----
T ss_pred CeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCC----EEEEEe--------------CCCeEEEEeCC-----
Confidence 689999998762 2233 234456889999999998 777662 23478888872
Q ss_pred hhhhhhhcCCCC-CCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcccee---
Q 004141 294 ASELELKESSSE-DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV--- 369 (771)
Q Consensus 294 ~~~~~~~~~~~~-~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~--- 369 (771)
. ......+..+...+....|+|+|+.++.....+ ..|.+||+...+..+......
T Consensus 309 -----------~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 309 -----------NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp -----------CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred -----------CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCccccCccccccCC
Confidence 2 223455556677789999999998755555432 358888886633211100000
Q ss_pred -eEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004141 370 -DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 370 -~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 419 (771)
.+...... +...+..++|+|+++.++++...++...+|.++
T Consensus 368 ~~~~~~~~~---------h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 368 PELLFIHGG---------HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTEEEECCC---------CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cceEEEcCC---------CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 00100000 112356788999999777777777877888764
No 362
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=1.1e-07 Score=101.26 Aligned_cols=299 Identities=10% Similarity=0.042 Sum_probs=155.5
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecC------CCCC
Q 004141 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNP------ENES 123 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~------~~~~ 123 (771)
+|+.+ +|+.++.. .+.. ..+..+|.. ..+.. ++.... . - .+++||||++|++.... ++..
T Consensus 82 ~~~~~-vyV~n~~~--~~~~-~~VsVID~~--t~~vv~~I~vG~-----~-P-gia~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARR-VYIQDPAH--FAAI-TQQFVIDGS--TGRILGMTDGGF-----L-P-HPVAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTE-EEEEECTT--TCSS-EEEEEEETT--TTEEEEEEEECS-----S-C-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCE-EEEECCCc--CCCC-CeEEEEECC--CCEEEEEEECCC-----C-C-ceEECCCCCEEEEEeccccccccCCCC
Confidence 57866 45555421 0001 577776652 22222 222221 2 3 78999999998654321 0022
Q ss_pred CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004141 124 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 124 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
..+..++ ...+..+.+.+..... .-....-..+.+||||++|+.....
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r--~~~g~~P~~~~~spDGk~lyV~n~~----------------------------- 197 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPR--FLVGTYQWMNALTPDNKNLLFYQFS----------------------------- 197 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCC--CCBSCCGGGSEECTTSSEEEEEECS-----------------------------
T ss_pred CEEEEEECCCCcEEEEEECCCccc--cccCCCcceEEEcCCCCEEEEEecC-----------------------------
Confidence 3466666 4555555555431000 0000011488999999987665321
Q ss_pred cccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004141 203 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
....|.++|+.++++..- ++-..+ ....|+|+. .++... ....+
T Consensus 198 -------------~~~~VsVID~~t~kvv~~--I~v~g~---~~~~p~g~~----~~v~~~--------------~dG~~ 241 (426)
T 3c75_H 198 -------------PAPAVGVVDLEGKTFDRM--LDVPDC---YHIFPASPT----VFYMNC--------------RDGSL 241 (426)
T ss_dssp -------------SSCEEEEEETTTTEEEEE--EECCSE---EEEEEEETT----EEEEEE--------------TTSSE
T ss_pred -------------CCCeEEEEECCCCeEEEE--EEcCCc---eeeccCCCc----EEEEEc--------------CCCCE
Confidence 136799999999886543 221111 234455554 444321 11234
Q ss_pred EEEecccccchhhhhhhhcCCCCCCcce-----ecCCCCc-cccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004141 283 YAVRVSLYKSEASELELKESSSEDLPVV-----NLTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~lt~~~~-~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
..+++ .+++.. .+..... ....+.+++||+.++|.... ..++++|+
T Consensus 242 ~~V~~-----------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~-----------g~V~ViD~ 293 (426)
T 3c75_H 242 ARVDF-----------------ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT-----------GKIFQADL 293 (426)
T ss_dssp EEEEC-----------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT-----------SEEEEEEE
T ss_pred EEEEC-----------------CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC-----------CcEEEEec
Confidence 44444 222211 1111111 12346789999999988743 25999998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCC-cccccCCCCCCccccCCCEEEEEeeeC-------CeeEEEEEECCCCcEEEe
Q 004141 357 PTNGNFSSLEKIVDVIPVVQCAEGDCF-PGLYSSSILSNPWLSDGCTMLLSSIWG-------SSQVIISVNVSSGELLRI 428 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f-~g~~~~~~~~~~~s~Dg~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l 428 (771)
.++....+.. ..+. ..... .|........+.+++|+++||+..... ....++.||..+.++..-
T Consensus 294 ~~~~~~v~~~-----~~~~---~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~ 365 (426)
T 3c75_H 294 TAEGATFRAP-----IEAL---TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK 365 (426)
T ss_dssp CSSCEEECCC-----EESS---CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred cCCceEEeee-----eeec---cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE
Confidence 7654321100 0000 00000 000001223467899999998876432 246799999999886643
Q ss_pred cCCCCCceeeEEeecCC-EEEEEEeCCCCCCeEEEEEeccc
Q 004141 429 TPAESNFSWSLLTLDGD-NIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 429 ~~~~~~~~~~~~s~dg~-~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
...........|++||+ .+|.+... -..|.++|..+.
T Consensus 366 I~vg~~P~gia~spDg~~~lyv~n~~---s~~VsVID~~t~ 403 (426)
T 3c75_H 366 IELGHEIDSINVSQDAEPLLYALSAG---TQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEECEEEECCSSSCEEEEEETT---TTEEEEEETTTC
T ss_pred EECCCCcCeEEEccCCCEEEEEEcCC---CCeEEEEECCCC
Confidence 32222234568999999 55544422 356888887654
No 363
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=1.1e-07 Score=102.73 Aligned_cols=247 Identities=15% Similarity=0.092 Sum_probs=152.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
-+.....||+++ .||+..+. .+.+| ..++..++..+... .+ .+.+++|||||++||..+.
T Consensus 106 ~y~~~l~wS~~n-~lAvgld~------tV~lWd~~tg~~~~~~~~~~~-~~------~V~sv~fspdg~~lasgs~---- 167 (420)
T 4gga_A 106 YYLNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS---- 167 (420)
T ss_dssp TTCBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET----
T ss_pred ccceeEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecCC-CC------cEEEEEECCCCCEEEEEEC----
Confidence 346678999865 67765432 35566 45566666554221 11 2369999999999988643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+..|.+||+.+++..... ......+.. +++|++.
T Consensus 168 ----------------------------------------Dg~v~iWd~~~~~~~~~~-~~h~~~v~~--~s~~~~~--- 201 (420)
T 4gga_A 168 ----------------------------------------SAEVQLWDVQQQKRLRNM-TSHSARVGS--LSWNSYI--- 201 (420)
T ss_dssp ----------------------------------------TSCEEEEETTTTEEEEEE-CCCSSCEEE--EEEETTE---
T ss_pred ----------------------------------------CCeEEEEEcCCCcEEEEE-eCCCCceEE--EeeCCCE---
Confidence 357899999988765541 223333444 4556664
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ ....++.+|... .......+..+...+....|+|+|+.|+....
T Consensus 202 -l~sgs---------------~d~~i~~~d~~~---------------~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~ 250 (420)
T 4gga_A 202 -LSSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 250 (420)
T ss_dssp -EEEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred -EEEEe---------------CCCceeEeeecc---------------cceeeEEecccccceeeeeecCCCCeeeeeec
Confidence 55443 334677777621 12233456666777888999999999987776
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+. .+.+++..+++.......... . ....+...+|+|++..++++........|.
T Consensus 251 D~-----------~v~i~~~~~~~~~~~~~~~~~-----------~----~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 251 DN-----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp TS-----------CEEEEESSCCSSCSCCSEEEC-----------C----CSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred cc-----------cceEEeeccccccceeeeeec-----------c----cCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 53 477888776654221110000 0 011244668999888787765533334566
Q ss_pred EEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 417 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.+|+.+++..........+....++++++.+++.....+ ..|++.+..++
T Consensus 305 iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d--~~I~iwd~~~~ 354 (420)
T 4gga_A 305 IWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPTM 354 (420)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTTC
T ss_pred EEeCCccccceeeccccceeeeeecCCCCeEEEEEecCC--CEEEEEECCCC
Confidence 669989887766555555666788999998887654333 34666665443
No 364
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=4.5e-07 Score=94.62 Aligned_cols=125 Identities=13% Similarity=0.120 Sum_probs=72.6
Q ss_pred ceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc--cCCCCCcccccCCCCCCccc
Q 004141 321 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWL 397 (771)
Q Consensus 321 ~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~g~~~~~~~~~~~s 397 (771)
.+.|. +||+ ++|.+.. .+++++|+.++..+.+ ... .++.. ...+-.| .....++++
T Consensus 230 ~~~~~~~dG~-~~~vs~~-----------g~V~v~d~~~~~~~v~-~~~----~~~~~~~~~~g~~p----~g~q~~a~~ 288 (386)
T 3sjl_D 230 HPAYSQKAGR-LVWPTYT-----------GKIHQIDLSSGDAKFL-PAV----EALTEAERADGWRP----GGWQQVAYH 288 (386)
T ss_dssp CCEEETTTTE-EEEEBTT-----------SEEEEEECTTSSCEEC-CCE----ESSCHHHHHTTEEE----CSSSCEEEE
T ss_pred cceeEcCCCc-EEEEeCC-----------CEEEEEECCCCcceee-cce----eccccccccccccC----CCcceeeEC
Confidence 35674 7885 6777753 2599999877653211 110 00000 0000011 123456778
Q ss_pred cCCCEEEEEeeeC-------CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 398 SDGCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 398 ~Dg~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
+|+++||+....+ ...+++.+|+.++++.+-..-........+++|++.++++.+. ....+.++|..++
T Consensus 289 ~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~ 364 (386)
T 3sjl_D 289 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESG 364 (386)
T ss_dssp TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTC
T ss_pred CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCC
Confidence 9999998876532 2468999999999876443322223457899999855555442 2356888887654
No 365
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.01 E-value=1.5e-08 Score=110.31 Aligned_cols=158 Identities=7% Similarity=0.060 Sum_probs=97.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC---cceEEEecCC---cccccccCCCcccceeecCCC-CeEEEEe
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS---QLEKEFHVPQ---TVHGSVYADGWFEGISWNSDE-TLIAYVA 171 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~g~~~~~~~~~~~~wSpDg-~~la~~~ 171 (771)
..+...+|||||+.|+.. .. + .+.+|+-. ...+++.... ..| .+.+..++|+||| +.|+..+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d--~---~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD--L---RINLWHLEITDRSFNIVDIKPANMEEL-----TEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS--S---EEEEEETTEEEEEEEEEECCCSSGGGC-----CCCEEEEEECSSCTTEEEEEE
T ss_pred cceEEEEEcCCCCEEEEe-CC--C---eEEEEECCCCCceeeeeeccccccccc-----CcceEEEEECCCCCcEEEEEe
Confidence 457889999999999864 32 2 45566322 2222222111 111 1234789999999 7777754
Q ss_pred cCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-----eeccCCCCCC------
Q 004141 172 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-----QAVKGIPKSL------ 240 (771)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-----~~l~~~~~~~------ 240 (771)
. ...|.+||+.+++. ..+. ....
T Consensus 247 ~--------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~ 280 (447)
T 3dw8_B 247 S--------------------------------------------KGTIRLCDMRASALCDRHSKLFE--EPEDPSNRSF 280 (447)
T ss_dssp T--------------------------------------------TSCEEEEETTTCSSSCTTCEEEC--CC-----CCH
T ss_pred C--------------------------------------------CCeEEEEECcCCccccceeeEec--cCCCcccccc
Confidence 3 25788999988774 4442 2221
Q ss_pred ------ccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cc-ceec
Q 004141 241 ------SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LP-VVNL 312 (771)
Q Consensus 241 ------~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~-~~~l 312 (771)
.+..+.|+|||+. |+..+ . ..|.++|+ .. ++ ...+
T Consensus 281 ~~~~~~~v~~~~~s~~g~~----l~~~~---------------~-~~v~iwd~-----------------~~~~~~~~~~ 323 (447)
T 3dw8_B 281 FSEIISSISDVKFSHSGRY----MMTRD---------------Y-LSVKVWDL-----------------NMENRPVETY 323 (447)
T ss_dssp HHHHTTCEEEEEECTTSSE----EEEEE---------------S-SEEEEEET-----------------TCCSSCSCCE
T ss_pred ccccCceEEEEEECCCCCE----EEEee---------------C-CeEEEEeC-----------------CCCcccccee
Confidence 6788999999997 77554 2 37888887 32 32 2333
Q ss_pred CCCCcc---------------ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 313 TESISS---------------AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 313 t~~~~~---------------~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
..+... .....|||||++|+..+.+ ..|++||+.+++.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~iwd~~~~~~ 376 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRMFDRNTKRD 376 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEEEETTTCCE
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEEEEcCCCcc
Confidence 322211 1238999999998765544 3588999888764
No 366
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.3e-08 Score=118.73 Aligned_cols=230 Identities=12% Similarity=0.132 Sum_probs=141.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~ 174 (771)
+.+...+|||||++|+.....+ .+.+| .++....+..+. +..+. +.+++|+|+ |+.|+..+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l~-~h~~~------V~~l~~s~~~~~~~l~s~s~D- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-GHEGP------VWRVDWAHPKFGTILASCSYD- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTT-----EEEEEEEETTEEEEEEEEC-CCSSC------EEEEEECCTTSCSEEEEEETT-
T ss_pred ceeEEEEECCCCCeEEEEECCC-----cEEEEecCCCCCccceecc-CCcCc------eEEEEecCCCCCCEEEEEeCC-
Confidence 4588899999999998775543 44555 222222222221 11222 268999998 9888886432
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC-
Q 004141 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD- 250 (771)
..|.+||+.+++. ..+ ......+..+.|+|+
T Consensus 77 -------------------------------------------g~I~vwd~~~~~~~~~~~~--~~h~~~V~~v~~sp~~ 111 (753)
T 3jro_A 77 -------------------------------------------GKVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHE 111 (753)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGG
T ss_pred -------------------------------------------CeEEEEECCCCcccccccc--cCCCCCeEEEEECCCC
Confidence 5789999998853 333 334557889999999
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC
Q 004141 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP 326 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp 326 (771)
|+. ++..+ .+..|.++|+ .++ ....+..+...+....|+|
T Consensus 112 ~~~~----l~sgs---------------~dg~I~vwdl-----------------~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 112 YGPL----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEC-----------------CSSSCCCCEEEECCSSCEEEEEECC
T ss_pred CCCE----EEEEe---------------CCCcEEEEEe-----------------ecCCCcceeEeecCCCceEEEEecC
Confidence 776 66655 3347888887 333 2344555667788999999
Q ss_pred -------------CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004141 327 -------------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 327 -------------DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
||+.|+..+.+. .|.+||+.++.... .....+.. +...+..
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg-----------~I~iwd~~~~~~~~------~~~~~~~~---------h~~~V~~ 209 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRD 209 (753)
T ss_dssp CC---------CGGGCCEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEE
T ss_pred cccccccccccCCCCCEEEEEECCC-----------eEEEEeccCCcccc------eeeeeecC---------CCCcEEE
Confidence 688888777653 48888887654210 01111100 1113457
Q ss_pred CccccC---CCEEEEEeeeCCeeEEEEEECCCCcE---EEec---CCCCCceeeEEeecCCEEEEEE
Q 004141 394 NPWLSD---GCTMLLSSIWGSSQVIISVNVSSGEL---LRIT---PAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 394 ~~~s~D---g~~l~~~~~~~~~~~l~~~d~~tg~~---~~l~---~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
++|+|+ ++ ++++...++...+|.+ .+++. ..+. .....+....|+++++.++...
T Consensus 210 l~~sp~~~~~~-~l~s~s~Dg~I~iwd~--~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 210 VAWSPTVLLRS-YLASVSQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEECCCCSSSE-EEEEEESSSCEEEEEE--SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred EEeccCCCCCC-EEEEEecCCEEEEecC--CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 789999 65 5566666776666644 44421 1111 1222345568899998776544
No 367
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.00 E-value=2.8e-10 Score=126.22 Aligned_cols=132 Identities=20% Similarity=0.167 Sum_probs=90.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHH-CCcEEEEECCCC-CCCCChhhhhcCCCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRG-SLGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~Vv~~d~rG-~~~~g~~~~~~~~~~ 591 (771)
+.|++.+ .+|.|... ..++.|+||++|||++....... ......|++ .|++|+.+|||. ..||+... ..+..
T Consensus 93 ~edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~~ 167 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSREA 167 (543)
T ss_dssp ESCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSSC
T ss_pred CCcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCCC
Confidence 3455555 46678642 34568999999999876544321 222345554 799999999993 22232211 00112
Q ss_pred ccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 004141 592 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++ ...|++||.|+|+|+||.++..++... +.+|+++|+.+|..
T Consensus 168 ~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 168 PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 2334589999999999876 237999999999999999998887643 46899999999853
No 368
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.00 E-value=3.1e-08 Score=104.42 Aligned_cols=109 Identities=14% Similarity=0.203 Sum_probs=74.6
Q ss_pred ccceEEEeCCC---CCeEEEEecCCCCCCeEEEEe---cCCcce-EEEec-CCcccccccCCCcccceeecCCCCeEEEE
Q 004141 99 TGASAVVPSPS---GSKLLVVRNPENESPIQFELW---SQSQLE-KEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPd---G~~la~~~~~~~~~~~~~~~~---~~~~~~-~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
..+...+|||+ |++|+.....+ .+.+| ..+... ..... ... +..++|+|||+.|+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQMHTGP----------VLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTS-----EEEEEEECTTSCEEEEEEEECSSC----------EEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCC-----cEEEEEcCCCCceeEEEeccccCC----------EEEEEECcCCCEEEEE
Confidence 56889999999 68887765433 34455 213222 22221 222 2689999999999876
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEE--e
Q 004141 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW--A 248 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~w--s 248 (771)
+. ...|.+||+.+++...+ ......+..+.| +
T Consensus 105 ~~--------------------------------------------dg~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 105 SC--------------------------------------------DKTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKA 138 (368)
T ss_dssp ET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEEEEC
T ss_pred cC--------------------------------------------CCcEEEEEcCCCCceee--ccccCceEEEEEEeC
Confidence 43 25899999999988777 455567888999 8
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEec
Q 004141 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 287 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 287 (771)
||++. |+..+ .+..|+++|+
T Consensus 139 ~~~~~----l~~~~---------------~dg~i~vwd~ 158 (368)
T 3mmy_A 139 PNYSC----VMTGS---------------WDKTLKFWDT 158 (368)
T ss_dssp SSCEE----EEEEE---------------TTSEEEEECS
T ss_pred CCCCE----EEEcc---------------CCCcEEEEEC
Confidence 88886 66554 2346888887
No 369
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.99 E-value=1.5e-08 Score=104.52 Aligned_cols=262 Identities=15% Similarity=0.083 Sum_probs=147.3
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccc
Q 004141 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSV 149 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~ 149 (771)
+.+++|++.++ +..++... ......+...+|||+|++||..+..+ .+.+|+ .++..+.......
T Consensus 45 ~tV~iWd~~tg--~~~~~~~~--~~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~~h~~----- 110 (318)
T 4ggc_A 45 NSVYLWSASSG--DILQLLQM--EQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSHSA----- 110 (318)
T ss_dssp TEEEEEETTTC--CEEEEEEC--CSTTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS-----
T ss_pred CEEEEEECCCC--CEEEEEEe--cCCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEecCccc-----
Confidence 45777776432 33222111 11124578899999999998766543 566773 3333222221111
Q ss_pred cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004141 150 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 150 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
....++++++.|+..+...... .+..... ........+........+.++....+++.....|.+||+.++
T Consensus 111 ------~~~~~~~~~~~l~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 111 ------RVGSLSWNSYILSSGSRSGHIH--HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ------CEEEEEEETTEEEEEETTSEEE--EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred ------eEEEeecCCCEEEEEecCCceE--eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 2456778888777665443221 0110000 000011112222223345555444555566788999999876
Q ss_pred ceeecc---CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC
Q 004141 229 EVQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 305 (771)
Q Consensus 229 ~~~~l~---~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 305 (771)
+..... .......+....|+|++.. +++.... .....|.++|. .
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~------------~~~~~i~lwd~-----------------~ 229 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSN----VLATGGG------------TSDRHIRIWNV-----------------C 229 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTT----EEEEEEC------------TTTCEEEEEET-----------------T
T ss_pred cccccceeeecccCCceEEEEecCCCCc----EEEEEec------------CCCCEEEEEec-----------------c
Confidence 532210 0223345678899999998 7765421 12336777786 4
Q ss_pred CCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcc
Q 004141 306 DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 385 (771)
Q Consensus 306 ~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g 385 (771)
.............+....|+|+++.++..+... ...|++||+.+++......+
T Consensus 230 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~---------d~~i~iwd~~~~~~~~~l~g------------------ 282 (318)
T 4ggc_A 230 SGACLSAVDAHSQVCSILWSPHYKELISGHGFA---------QNQLVIWKYPTMAKVAELKG------------------ 282 (318)
T ss_dssp TCCEEEEEECSSCEEEEEEETTTTEEEEEECTT---------TCCEEEEETTTCCEEEEECC------------------
T ss_pred cccccccccceeeeeeeeecccccceEEEEEcC---------CCEEEEEECCCCcEEEEEcC------------------
Confidence 455444444555677889999999998876432 24699999887654221111
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004141 386 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 386 ~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~ 417 (771)
+...+..++|+|||+.| ++.+.++...||.
T Consensus 283 -H~~~V~~l~~spdg~~l-~S~s~D~~v~iWd 312 (318)
T 4ggc_A 283 -HTSRVLSLTMSPDGATV-ASAAADETLRLWR 312 (318)
T ss_dssp -CSSCEEEEEECTTSSCE-EEEETTTEEEEEC
T ss_pred -CCCCEEEEEEcCCCCEE-EEEecCCeEEEEE
Confidence 11235577899999855 5666777777774
No 370
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4.1e-09 Score=116.77 Aligned_cols=303 Identities=10% Similarity=-0.024 Sum_probs=149.1
Q ss_pred hcccceeEEEEEEeecCCCCcc---ceeecCCccccccceEEEeCCC------CCeEEEEecCCCCCCeEEEEecCCcc-
Q 004141 66 LANKRKKFMLSTVISKENENSV---TFQWAPFPVEMTGASAVVPSPS------GSKLLVVRNPENESPIQFELWSQSQL- 135 (771)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~---~lt~~~~~~~~~~~~~~~~SPd------G~~la~~~~~~~~~~~~~~~~~~~~~- 135 (771)
++....+.+.+|++........ .+... .+.+...+|||+ |+.||..+.. +.-.+|.+..+...
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~-----~~~V~~v~wsp~~~~~~~~~~LAs~s~D--gtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHS-----FGEVWDLKWHEGCHAPHLVGCLSFVSQE--GTINFLEIIDNATDV 249 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEEC-----CCSEEEEEECSSCCCSSSSCEEEEEETT--SCEEEEECCCCSSSS
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEec-----CCcEEEEEECCCCCCCCCCceEEEEecC--CeEEEEEcCCCcccc
Confidence 4445566777777754321111 11111 145788999997 5677766553 33333333221111
Q ss_pred eEEEecCCcccccc-cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC-CCCccCCCCCCcc--cccCCc-Cc
Q 004141 136 EKEFHVPQTVHGSV-YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG-SSDKDCNSWKGQG--DWEEDW-GE 210 (771)
Q Consensus 136 ~~~~~~~~~~~g~~-~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~d~-g~ 210 (771)
........... .+ .....+.+++|+|++ .|+..+.++..+ .|+....... .....+......+ .|.++. ..
T Consensus 250 ~~~~~~~~p~~-~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~--lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 250 HVFKMCEKPSL-TLSLADSLITTFDFLSPT-TVVCGFKNGFVA--EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp SEEECCCSCSE-EECCTTTCEEEEEESSSS-EEEEEETTSEEE--EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCE
T ss_pred ccceeecCceE-EEEcCCCCEEEEEecCCC-eEEEEeCCCEEE--EEECCCCCCceEEeecccccEEEEEEEcCCCCCeE
Confidence 00000000000 00 001234789999975 677777665433 3433221111 1122334444444 456663 23
Q ss_pred ccCCccCceEEEEEccCCceee-ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004141 211 TYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 211 ~~~~~~~~~l~v~d~~~~~~~~-l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
..++..+..|.+||+.+++... +.+......+..++||||++. ++..+ ....|.++|+
T Consensus 326 laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~----l~s~~---------------~d~tv~lwd~-- 384 (524)
T 2j04_B 326 VSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS----YIYSD---------------GASSLRAVPS-- 384 (524)
T ss_dssp EEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE----EEEEC---------------SSSEEEEEET--
T ss_pred EEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe----EEEeC---------------CCCcEEEEEC--
Confidence 4566677899999998765422 211111123567899999987 76654 2225778887
Q ss_pred ccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce
Q 004141 290 YKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 368 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 368 (771)
..+. ...+..+...+.+.+|||||+.|+..+.+. .|.+||+..+-........
T Consensus 385 ---------------~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg-----------tv~lwd~~~~~~~~~~~~~ 438 (524)
T 2j04_B 385 ---------------RAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG-----------SLIITNAARRLLHGIKNSS 438 (524)
T ss_dssp ---------------TCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT-----------EEECCBSCSSTTTCC----
T ss_pred ---------------cccccceeeecCCCceEEEEeCCCCCeEEEEECCC-----------EEEEEechHhhccccccCc
Confidence 4444 356777778899999999999988766553 4777776543111000000
Q ss_pred eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCC
Q 004141 369 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD 445 (771)
Q Consensus 369 ~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~ 445 (771)
... .. ..+..++|+|||+.+-+ .+ ...++.++..+..+..+......+....|+|++.
T Consensus 439 -~~~--------~~------~~v~~v~~sp~g~~~~~---~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 439 -ATQ--------KS------LRLWKWDYSIKDDKYRI---DS-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp ---C--------CC------CEEEECBCCSSSCEEEE---CC-CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred -cce--------ee------eEEEEeccCCCCCeEEc---cC-CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 000 00 01235688999984422 11 1223333322333445555555566779999864
No 371
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.98 E-value=7.8e-08 Score=99.96 Aligned_cols=236 Identities=14% Similarity=0.088 Sum_probs=136.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
...|+|+|+++.++++... ..+++.++ .++.. +.+..+..+ .++.|+|||+.++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~---~~~i~~~d~~~~~~-~~~~~~~~v----------~~i~~~~dg~l~v~~--------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL---ERELHELHLASGRK-TVHALPFMG----------SALAKISDSKQLIAS--------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG---GTEEEEEETTTTEE-EEEECSSCE----------EEEEEEETTEEEEEE---------
T ss_pred CcCCeEeCCCCEEEEEECC---CCEEEEEECCCCcE-EEEECCCcc----------eEEEEeCCCeEEEEE---------
Confidence 3579999999988887543 24678777 44433 333333333 588999999865542
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCcc
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~ 256 (771)
...|+++|.++++.+.+..... ...+..+.++|||+
T Consensus 108 -------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 146 (326)
T 2ghs_A 108 -------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA---- 146 (326)
T ss_dssp -------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC----
T ss_pred -------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC----
Confidence 1248999999888776631111 12456789999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
+++....... ......||+++ + ++.+.+.........++|||||+.|++...
T Consensus 147 -l~v~~~~~~~--------~~~~~~l~~~~-~------------------g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 147 -LWIGTMGRKA--------ETGAGSIYHVA-K------------------GKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -EEEEEEETTC--------CTTCEEEEEEE-T------------------TEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -EEEEeCCCcC--------CCCceEEEEEe-C------------------CcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 6665422110 01234688886 2 233333332233567899999999988764
Q ss_pred CCCCCCCCccccccceeeecC--CC-CCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 337 KSSVDSGAHSATDSLHRIDWP--TN-GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
.. ..|+++|+. ++ .... ...+..+ ..... .+..+++.+||. |+++... ..
T Consensus 199 ~~----------~~I~~~d~~~~~Gl~~~~----~~~~~~~---~~~~~-------~p~gi~~d~~G~-lwva~~~--~~ 251 (326)
T 2ghs_A 199 KV----------NRLMRVPLDARTGLPTGK----AEVFIDS---TGIKG-------GMDGSVCDAEGH-IWNARWG--EG 251 (326)
T ss_dssp TT----------CEEEEEEBCTTTCCBSSC----CEEEEEC---TTSSS-------EEEEEEECTTSC-EEEEEET--TT
T ss_pred CC----------CEEEEEEcccccCCcccC----ceEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEeC--CC
Confidence 32 469999975 44 2211 0001110 00001 123456788886 5554432 23
Q ss_pred EEEEEECCCCcEEEecCCCCCceeeEEe-ecCCEEEEEEeCCC
Q 004141 414 VIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSPV 455 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s-~dg~~l~~~~~~~~ 455 (771)
.|++++.++..+..+...........|+ ++++.|+++.....
T Consensus 252 ~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 6888898544445555443334556777 77788777665443
No 372
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.97 E-value=6.7e-08 Score=100.72 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=117.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecC--CCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~~~~~~~ 176 (771)
..+...+|||||++||.....+ .-.+|.+..+....++...-....+. +.+++|+| |++.|+..+.+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~d~~~l~s~~~d--- 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQ--HIKVFKLDKDTSNWELSDSWRAHDSS------IVAIDWASPEYGRIIASASYD--- 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTS--EEEEEEECSSSCCEEEEEEEECCSSC------EEEEEECCGGGCSEEEEEETT---
T ss_pred cceeEEEEcCCCCEEEEeeCCC--eEEEEECCCCCCcceecceeccCCCc------EEEEEEcCCCCCCEEEEEcCC---
Confidence 4588899999999998775433 22233332222221222111111112 26899999 69988876432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc----------eeeccCCCCCCccceEE
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----------VQAVKGIPKSLSVGQVV 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~----------~~~l~~~~~~~~~~~~~ 246 (771)
..|.+||+.+++ ...+ ......+..+.
T Consensus 81 -----------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~ 117 (351)
T 3f3f_A 81 -----------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTL--NDSKGSLYSVK 117 (351)
T ss_dssp -----------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEE--CCCSSCEEEEE
T ss_pred -----------------------------------------CeEEEEecCCCcccccccCcceeeee--cccCCceeEEE
Confidence 578889988763 3333 34455688999
Q ss_pred EecC--CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eec-----------
Q 004141 247 WAPL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL----------- 312 (771)
Q Consensus 247 wspD--g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~l----------- 312 (771)
|+|+ ++. |+..+ .+..|.++|+ ..++. ..+
T Consensus 118 ~~~~~~~~~----l~~~~---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 118 FAPAHLGLK----LACLG---------------NDGILRLYDA-----------------LEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp ECCGGGCSE----EEEEE---------------TTCEEEEEEC-----------------SSTTCTTCCEEEEEEESCSC
T ss_pred EcCCCCCcE----EEEec---------------CCCcEEEecC-----------------CChHHhcccccccccccccc
Confidence 9999 886 66655 3346888887 22221 111
Q ss_pred --CCCCccccceeecCC---CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc
Q 004141 313 --TESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 387 (771)
Q Consensus 313 --t~~~~~~~~p~~SpD---G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~ 387 (771)
......+....|+|+ ++.|+..+.+. .+..++...+....+ ..+.. .
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~--------~~~~~---------h 213 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----------AIIYQRGKDGKLHVA--------AKLPG---------H 213 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----------EEEEEECTTSCEEEE--------EECCC---------C
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCC-----------cEEEEccCCCceeee--------eecCC---------C
Confidence 123445778999998 88877766542 233333333321110 00000 0
Q ss_pred cCCCCCCccccCCC---EEEEEeeeCCeeEEEEEEC
Q 004141 388 SSSILSNPWLSDGC---TMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 388 ~~~~~~~~~s~Dg~---~l~~~~~~~~~~~l~~~d~ 420 (771)
...+..++|+|++. .++++...++...+|.+..
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 11345678999983 4667777778778886653
No 373
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.96 E-value=3.5e-10 Score=125.67 Aligned_cols=131 Identities=20% Similarity=0.188 Sum_probs=86.8
Q ss_pred cCCCceEEEEEEecCCCC-CCCCCcEEEEEcCCCCCCCCCc-------chHHHHHHH-HCCcEEEEECCCCC-CCCChhh
Q 004141 515 KGAQKPFEAIFVSSSHKK-DCSCDPLIVVLHGGPHSVSLSS-------YSKSLAFLS-SVGYSLLIVNYRGS-LGFGEEA 584 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~-~~~~~p~vv~~HGg~~~~~~~~-------~~~~~~~la-~~G~~Vv~~d~rG~-~~~g~~~ 584 (771)
+.|.+.+ .+|.|.... ..++.|+||++|||++...... +......|+ ..|++|+.+|||.. .++....
T Consensus 77 sedcl~l--nv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 77 NEDCLYL--NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp CSCCCEE--EEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCEE--EEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 4455555 577786432 3467899999999986543321 111123444 45799999999942 1221111
Q ss_pred hhcCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhh--CCCceeEEEecCCc
Q 004141 585 LQSLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 650 (771)
Q Consensus 585 ~~~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~p~ 650 (771)
....+++ ..+.|+.++++|+.++ ...|++||.|+|+|.||.++..++.. ...+|+++|+.++.
T Consensus 155 ~~~~pgn---~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 155 DSNLPGN---YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp STTCCCC---HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCc---cchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1112222 2478999999999875 24799999999999999999988764 34689999988874
No 374
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.95 E-value=3.6e-08 Score=103.92 Aligned_cols=230 Identities=9% Similarity=0.045 Sum_probs=120.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|||||+.||...+.. +.+|+......+... ..+. ....|+++++.++.++.... .
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~------~~iw~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~-~ 82 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS------FEIYNVHPVAHIMSQEMRHL----------SKVRMLHRTNYVAFVTGVKE-V 82 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE------EEEEEETTEEEEEEEECSCC----------CEEEECTTSSEEEEECSSTT-E
T ss_pred CceEEEEECCCCCEEEEEcCCE------EEEEecCCcceeeeeecCCe----------EEEEEcCCCCEEEEEECCcc-E
Confidence 4588899999999998654321 346632222222211 1122 57889999998877654321 1
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-ceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
...|+........... .......+.+.++. +.......|++||+.++ +.... ... ..+..+++| +.
T Consensus 83 v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~---~~~~~~~~i~i~d~~~~~~~~~~--~~~--~~~~~~~s~--~~--- 149 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRIK-VDAPVKDLFLSREF---IVVSYGDVISVFKFGNPWKRITD--DIR--FGGVCEFSN--GL--- 149 (355)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSE---EEEEETTEEEEEESSTTCCBSSC--CEE--EEEEEEEET--TE---
T ss_pred EEEEECCCCcEEEEEE-CCCceEEEEEcCCE---EEEEEcCEEEEEECCCCceeeEE--ecc--CCceEEEEc--cE---
Confidence 1223221111100000 11111122233321 11123456777777765 22111 111 233445666 43
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----------------ceecCCCCccc
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----------------VVNLTESISSA 319 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----------------~~~lt~~~~~~ 319 (771)
+++.+ ......|.++|+ .++. ...+..+...+
T Consensus 150 -la~~s-------------g~~~g~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v 198 (355)
T 3vu4_A 150 -LVYSN-------------EFNLGQIHITKL-----------------QSSGSATTQDQGVQQKAILGKGVLIKAHTNPI 198 (355)
T ss_dssp -EEEEE-------------SSCTTCEEEEEC-----------------CC------------------CCEEECCCSSCE
T ss_pred -EEEeC-------------CCcCcEEEEEEC-----------------CCCCccccccccccccccCcccEEEEccCCce
Confidence 66652 113346888887 3332 45667777889
Q ss_pred cceeecCCCCEEEEEecCCCCCCCCcccccc-ceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 320 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDS-LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 320 ~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
...+|||||+.|+..+.+ .. |.+||+.+++.... +.. |.+...+..++|+|
T Consensus 199 ~~~~~s~~g~~l~s~s~d-----------~~~v~iwd~~~~~~~~~----------~~~-------g~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQD-----------GTIIRVFKTEDGVLVRE----------FRR-------GLDRADVVDMKWST 250 (355)
T ss_dssp EEEEECTTSSEEEEEETT-----------CSEEEEEETTTCCEEEE----------EEC-------TTCCSCEEEEEECT
T ss_pred EEEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEE----------EEc-------CCCCCcEEEEEECC
Confidence 999999999998877755 34 88899887654211 100 00112355788999
Q ss_pred CCCEEEEEeeeCCeeEEEEE
Q 004141 399 DGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~ 418 (771)
||+.| ++...++...||.+
T Consensus 251 ~~~~l-~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 251 DGSKL-AVVSDKWTLHVFEI 269 (355)
T ss_dssp TSCEE-EEEETTCEEEEEES
T ss_pred CCCEE-EEEECCCEEEEEEc
Confidence 99865 45555666666643
No 375
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.95 E-value=2.9e-08 Score=102.77 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=136.1
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCC--CCCeEEEEecCCCCCCeE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~~~~ 126 (771)
++||++|+-.. ..+.+.+|++....... ..+.. ....+...+|+| +|+.||..+... .
T Consensus 22 s~~g~~lasgs---------~D~~v~lwd~~~~~~~~~~~l~g-----H~~~V~~v~~~~~~~~~~l~s~s~D~-----~ 82 (316)
T 3bg1_A 22 DYYGTRLATCS---------SDRSVKIFDVRNGGQILIADLRG-----HEGPVWQVAWAHPMYGNILASCSYDR-----K 82 (316)
T ss_dssp CGGGCEEEEEE---------TTTEEEEEEEETTEEEEEEEEEC-----CSSCEEEEEECCGGGSSCEEEEETTS-----C
T ss_pred cCCCCEEEEEe---------CCCeEEEEEecCCCcEEEEEEcC-----CCccEEEEEeCCCCCCCEEEEEECCC-----E
Confidence 45777666432 33566777764331111 11221 225688899987 488888766543 4
Q ss_pred EEEec--CCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004141 127 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
..+|+ .+....+..+. ...+ .+.+++|+|| |+.|+..+.
T Consensus 83 v~iWd~~~~~~~~~~~~~-~h~~------~V~~v~~~p~~~g~~lasgs~------------------------------ 125 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHA-GHDS------SVNSVCWAPHDYGLILACGSS------------------------------ 125 (316)
T ss_dssp EEEECCSSSCCCEEEEEC-CCSS------CCCEEEECCTTTCSCEEEECS------------------------------
T ss_pred EEEEECCCCcceEEEEcc-CCCC------ceEEEEECCCCCCcEEEEEcC------------------------------
Confidence 55662 23222222221 1111 1268999998 777777533
Q ss_pred cccCCcCcccCCccCceEEEEEccCCce-eecc-CCCCCCccceEEEecCC-----------------CCCccEEEEEee
Q 004141 203 DWEEDWGETYAGKRQPSLFVININSGEV-QAVK-GIPKSLSVGQVVWAPLN-----------------EGLHQYLVFVGW 263 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~-~~~~~~~~~~~~wspDg-----------------~~~~~~l~~~~~ 263 (771)
+..|.+||+.++.. .... .......+..+.|+|++ +. |+..+
T Consensus 126 --------------D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sgs- 186 (316)
T 3bg1_A 126 --------------DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR----FASGG- 186 (316)
T ss_dssp --------------SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB----EECCB-
T ss_pred --------------CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce----EEEec-
Confidence 25688888876632 1110 02233456788999984 33 33322
Q ss_pred cCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecCCC----CEEEEEec
Q 004141 264 SSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSPDG----KFLVFLSA 336 (771)
Q Consensus 264 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~SpDG----~~l~f~~~ 336 (771)
.+..|.++|+. ..+ ....+..+...+...+|||++ +.|+..+.
T Consensus 187 --------------~D~~v~lWd~~----------------~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 187 --------------CDNLIKLWKEE----------------EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp --------------TTSBCCEEEEC----------------TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred --------------CCCeEEEEEeC----------------CCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 23356666651 122 234556666778999999997 67776665
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
+. .|.+|++.+......... +.. . +...+..++|+|||+.| ++...++...||
T Consensus 237 D~-----------~v~iw~~~~~~~~~~~~~---~~~--------~----~~~~v~~v~~sp~g~~l-as~~~D~~v~lw 289 (316)
T 3bg1_A 237 DG-----------RVFIWTCDDASSNTWSPK---LLH--------K----FNDVVWHVSWSITANIL-AVSGGDNKVTLW 289 (316)
T ss_dssp TC-----------EEEEEECSSTTCCCCBCC---EEE--------E----CSSCEEEEEECTTTCCE-EEEESSSCEEEE
T ss_pred CC-----------eEEEEEccCccccchhhh---hhh--------c----CCCcEEEEEEcCCCCEE-EEEcCCCeEEEE
Confidence 53 477888765321000000 000 0 11134577899999865 555667788888
Q ss_pred EEECCCCcEEEe
Q 004141 417 SVNVSSGELLRI 428 (771)
Q Consensus 417 ~~d~~tg~~~~l 428 (771)
..+.. |+...+
T Consensus 290 ~~~~~-g~~~~~ 300 (316)
T 3bg1_A 290 KESVD-GQWVCI 300 (316)
T ss_dssp EECTT-SCEEEE
T ss_pred EECCC-CcEEEe
Confidence 77653 554444
No 376
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.95 E-value=2e-10 Score=127.48 Aligned_cols=131 Identities=22% Similarity=0.207 Sum_probs=88.7
Q ss_pred cCCCceEEEEEEec-----CCCCCCCC----CcEEEEEcCCCCCCCCCcc-hHHHHHHHHCCcEEEEECCCCCC-CCChh
Q 004141 515 KGAQKPFEAIFVSS-----SHKKDCSC----DPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSL-GFGEE 583 (771)
Q Consensus 515 ~~~g~~l~~~~~~P-----~~~~~~~~----~p~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~Vv~~d~rG~~-~~g~~ 583 (771)
+.|.+. ..+|.| ... ..++ .|+||++|||++....... ......|+++|++|+.+|||... |+...
T Consensus 87 ~edcL~--lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~ 163 (551)
T 2fj0_A 87 SEACIH--ANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSL 163 (551)
T ss_dssp CSCCCE--EEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCC
T ss_pred CCCCeE--EEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccC
Confidence 344544 457778 322 2333 8999999998865543321 12345677899999999999521 12111
Q ss_pred hhhcCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhh--CCCceeEEEecCCcc
Q 004141 584 ALQSLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 651 (771)
Q Consensus 584 ~~~~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~p~~ 651 (771)
.. ....+...+.|+.++++|+.++ ...|++||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 ~~---~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 NS---TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SS---SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cc---cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 10 1112334589999999999886 23689999999999999999988765 356899999998863
No 377
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.95 E-value=2.6e-09 Score=107.85 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=83.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
+...++.|.. .+.+..+.||++||...+. ...|. .....|.++||.|+.+|++| +|... .....++
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG---~G~~~--------~~~~~~~ 116 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPP---FMLND--------TQVNTEY 116 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTT---TTCSC--------HHHHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCC---CCCCc--------HHHHHHH
Confidence 4444666633 2334556799999975542 12455 67888999999999999998 43221 1123567
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC---CCceeEEEecCCccc
Q 004141 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 652 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~p~~~ 652 (771)
+.+.++.+.+.. ..+++.|+||||||.++.+++..+ +++++.+|+++|...
T Consensus 117 la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 117 MVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 777888877763 347899999999999998777764 589999999988754
No 378
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.94 E-value=3.2e-08 Score=117.53 Aligned_cols=216 Identities=9% Similarity=0.084 Sum_probs=125.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+...+|||||+.||.....+ .+.+|+......+..... .+ .+..++||| |++|+..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg-----~I~lw~~~~~~~~~~~~~--~~------~V~~l~fsp-g~~L~S~s~------ 77 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTG-----EVHIYGQQQVEVVIKLED--RS------AIKEMRFVK-GIYLVVINA------ 77 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----EEEEECSTTCEEEEECSS--CC------CEEEEEEET-TTEEEEEET------
T ss_pred CCcEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEcCC--CC------CEEEEEEcC-CCEEEEEEC------
Confidence 4578899999999999876543 566673322222222221 11 236999999 887776543
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
+..|.+||+.+++.... ......+..++|+|||+. |
T Consensus 78 --------------------------------------D~~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~----l 113 (902)
T 2oaj_A 78 --------------------------------------KDTVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDW----M 113 (902)
T ss_dssp --------------------------------------TCEEEEEETTTCSEEEE--EECSSCEEEEECCTTCSE----E
T ss_pred --------------------------------------cCeEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCE----E
Confidence 26899999998875443 223346788999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc------------eecCCCCccccceeecC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV------------VNLTESISSAFFPRFSP 326 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~~lt~~~~~~~~p~~Sp 326 (771)
+..+ .+..|.++|+ .++.. ..+..+...+.+.+|+|
T Consensus 114 ~sgs---------------~dg~V~lwd~-----------------~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 114 LIGL---------------QNGSMIVYDI-----------------DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEE---------------TTSCEEEEET-----------------TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 6654 2346888887 44432 12334556788999999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCC--CCcccccCCCCCCccccCCCEEE
Q 004141 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTML 404 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~f~g~~~~~~~~~~~s~Dg~~l~ 404 (771)
++..++.....+ ..+ +||+.+++.......... + -...... .........+..++|+|||+.|
T Consensus 162 ~~~~~l~~g~~d----------g~v-lWd~~~~~~~~~~~~~~~--~-g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l- 226 (902)
T 2oaj_A 162 RDIGTVLISYEY----------VTL-TYSLVENEIKQSFIYELP--P-FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI- 226 (902)
T ss_dssp TEEEEEEEECSS----------CEE-EEETTTTEEEEEECCCBC--T-TCCCSTTCCCTTSCBCCCEEEEEECTTSSEE-
T ss_pred CCCCEEEEEeCC----------CcE-EEECCCCceEEEEecccC--C-cCCCcccccccccccCCCeEEEEEcCCCCEE-
Confidence 754333444332 347 889877653211000000 0 0000000 0000011235578899999855
Q ss_pred EEeeeCCeeEEEEEECCCCcEEE
Q 004141 405 LSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 405 ~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
++...++...|| |+.+++...
T Consensus 227 asgs~Dg~i~lW--d~~~g~~~~ 247 (902)
T 2oaj_A 227 ITIHEDNSLVFW--DANSGHMIM 247 (902)
T ss_dssp EEEETTCCEEEE--ETTTCCEEE
T ss_pred EEEECCCeEEEE--ECCCCcEEE
Confidence 455556555555 887887654
No 379
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.94 E-value=4.4e-07 Score=101.04 Aligned_cols=317 Identities=8% Similarity=-0.012 Sum_probs=169.4
Q ss_pred chhhHHHHHHHHHHHHHhhcCc-cccc-----e--EEE--------ecCCCCcceEEEEEeechhhcccceeEEEEEEee
Q 004141 17 DATAEEEYASLSKLLQDFTNIS-SIDK-----A--WTF--------NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVIS 80 (771)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~--~~~--------~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (771)
..-+.++++.+.+.++.+..-+ .+.. . .+. +..+.|....+|..... ...++++|..
T Consensus 113 ~~Lsd~ei~~l~~yi~~~~~~~~~~~~~~i~~s~kv~~~~~~~P~~~~~~~d~~~~~~V~~~~-------~~~V~viD~~ 185 (567)
T 1qks_A 113 GELSAEQVDLMANYLLLDPAAPPEFGMKEMRESWKVHVAPEDRPTQQMNDWDLENLFSVTLRD-------AGQIALIDGS 185 (567)
T ss_dssp CCCCHHHHHHHHHHHHSCCCCCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEETT-------TTEEEEEETT
T ss_pred CCCCHHHHHHHHHHHhhcccCCCccchhhhhccceeeccccccccccccccCCCceEEEEeCC-------CCeEEEEECC
Confidence 3446677777777666554311 1110 0 111 12345656667765542 3577886653
Q ss_pred cCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec---CCcceEEEecCCcccccccCCCccc
Q 004141 81 KENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQTVHGSVYADGWFE 156 (771)
Q Consensus 81 ~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~ 156 (771)
..+.. ++... .....+++||||++++.. ..+ ..+..++. ..+....+...... .
T Consensus 186 --t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~-~~d---g~V~viD~~~~t~~~v~~i~~G~~P----------~ 243 (567)
T 1qks_A 186 --TYEIKTVLDTG------YAVHISRLSASGRYLFVI-GRD---GKVNMIDLWMKEPTTVAEIKIGSEA----------R 243 (567)
T ss_dssp --TCCEEEEEECS------SCEEEEEECTTSCEEEEE-ETT---SEEEEEETTSSSCCEEEEEECCSEE----------E
T ss_pred --CCeEEEEEeCC------CCccceEECCCCCEEEEE-cCC---CeEEEEECCCCCCcEeEEEecCCCC----------c
Confidence 22222 22222 234578999999998654 332 24666663 33333333333333 4
Q ss_pred ceeec----CCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceee
Q 004141 157 GISWN----SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA 232 (771)
Q Consensus 157 ~~~wS----pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~ 232 (771)
.+.|| |||++|+...+. .+.+.++|..+.++..
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~-------------------------------------------~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYW-------------------------------------------PPQYVIMDGETLEPKK 280 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEE-------------------------------------------TTEEEEEETTTCCEEE
T ss_pred eeEEccccCCCCCEEEEEEcc-------------------------------------------CCeEEEEECCCCcEEE
Confidence 88999 799988776443 2678889988877655
Q ss_pred ccCCCC----------CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcC
Q 004141 233 VKGIPK----------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 302 (771)
Q Consensus 233 l~~~~~----------~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 302 (771)
...+.. ...+..+..|+++.. +++... ...+|+.+|.
T Consensus 281 ~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~----~vv~~~--------------~~g~v~~vd~--------------- 327 (567)
T 1qks_A 281 IQSTRGMTYDEQEYHPEPRVAAILASHYRPE----FIVNVK--------------ETGKILLVDY--------------- 327 (567)
T ss_dssp EEECCEECTTTCCEESCCCEEEEEECSSSSE----EEEEET--------------TTTEEEEEET---------------
T ss_pred EEeccccccccccccCCCceEEEEEcCCCCE----EEEEec--------------CCCeEEEEec---------------
Confidence 411111 113456677888765 444331 2348999997
Q ss_pred CCCCCc---ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccC
Q 004141 303 SSEDLP---VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE 379 (771)
Q Consensus 303 ~~~~~~---~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 379 (771)
.... ...+. .........|+|||++++...+. ...|.++|+.+++... .+++- ..
T Consensus 328 --~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~----------sn~V~ViD~~t~kl~~-------~i~vg--g~ 385 (567)
T 1qks_A 328 --TDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANA----------RNKLVVIDTKEGKLVA-------IEDTG--GQ 385 (567)
T ss_dssp --TCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGG----------GTEEEEEETTTTEEEE-------EEECS--SS
T ss_pred --CCCccceeeeee-ccccccCceECCCCCEEEEEeCC----------CCeEEEEECCCCcEEE-------EEecc--Cc
Confidence 3221 11121 12234456899999987665543 3569999998765311 11110 00
Q ss_pred CCCCcccccCCCCCCc-cccCCCEEEEEeeeCCeeEEEEEECCCC-------c-EEEecCCCCCceeeEEeecCCEEEEE
Q 004141 380 GDCFPGLYSSSILSNP-WLSDGCTMLLSSIWGSSQVIISVNVSSG-------E-LLRITPAESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 380 ~~~f~g~~~~~~~~~~-~s~Dg~~l~~~~~~~~~~~l~~~d~~tg-------~-~~~l~~~~~~~~~~~~s~dg~~l~~~ 450 (771)
...|| .... +.|++..++++.. -+...+..|+.+++ + ++.+............+|+++++++.
T Consensus 386 -~Phpg------~g~~~~~p~~g~v~~t~~-~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 386 -TPHPG------RGANFVHPTFGPVWATSH-MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp -SBCCT------TCEEEEETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE
T ss_pred -CCCCc------cceeeECCCCCcEEEeCC-CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEe
Confidence 01111 1222 4788777765543 33345777787762 3 34443322211234568899988865
Q ss_pred Ee-CCC--CCCeEEEEEeccc
Q 004141 451 SS-SPV--DVPQVKYGYFVDK 468 (771)
Q Consensus 451 ~~-~~~--~p~~l~~~~~~~~ 468 (771)
.. +++ ....+.++++.+.
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCcccCceEEEEECCcc
Confidence 42 221 1236888887644
No 380
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.94 E-value=3.4e-09 Score=104.21 Aligned_cols=197 Identities=13% Similarity=0.037 Sum_probs=105.9
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.+.|+++||.+.. ...|...+..|.. |.|+.+|++| ++. ..+++.+.++.+. ..+
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIE---EED-------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCC---STT-------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCC---HHH-------------HHHHHHHHHHHhC-----CCC
Confidence 4789999997654 3467777777754 9999999997 321 1345555555431 135
Q ss_pred eEEEEEcChhHHHHHHHHhhC---CCceeEEEecCCccchh--hhhcCCCCCcch-hhhhccCCCCccCCCCCC-hhhHH
Q 004141 617 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLA--LMVGTTDIPDWC-YVESYGSKGKDSFTESPS-VEDLT 689 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~ 689 (771)
++.++|||+||.++..++.+. ++.++++++.++..... .+.......... +... .......+ .+. .....
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~ 148 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNV-NRDNEALN--SEAVKHGLK 148 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHH-TTTCSGGG--SHHHHHHHH
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhc-Chhhhhhh--hHHHHHHHH
Confidence 799999999999999998765 35688888877653211 000000000000 0000 00000000 000 00000
Q ss_pred ----HHhhcCc-ccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCc--cCCCCCChHHHHHHH
Q 004141 690 ----RFHSKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH--GIERPQSDFESFLNI 762 (771)
Q Consensus 690 ----~~~~~sp-~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H--~~~~~~~~~~~~~~i 762 (771)
.+..... .....++++|+++++|++|..++. ....+.+ ....+++++.+++ +| .+. .+....+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~~-~~~~~~~~~~i 222 (230)
T 1jmk_C 149 QKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEE---ATTGAYRMKRGFG-THAEMLQ-GETLDRNAGIL 222 (230)
T ss_dssp HHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGG---GBSSCEEEEECSS-CGGGTTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHH---hcCCCeEEEEecC-ChHHHcC-cHhHHHHHHHH
Confidence 0000000 023467889999999999998862 2212211 1123588999997 88 443 22233444555
Q ss_pred HHHHH
Q 004141 763 GLWFK 767 (771)
Q Consensus 763 ~~fl~ 767 (771)
.+||.
T Consensus 223 ~~~l~ 227 (230)
T 1jmk_C 223 LEFLN 227 (230)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 55553
No 381
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.94 E-value=5.1e-07 Score=98.79 Aligned_cols=296 Identities=10% Similarity=0.064 Sum_probs=162.5
Q ss_pred eechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEE
Q 004141 61 SQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKE 138 (771)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~ 138 (771)
+..-+..+...+.+.+|++... .....+. ...+.+...+|+|++ .++..+..+ .+.+| ..++....
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~-~~~~~~~-----~h~~~V~~l~~~~~~-~l~s~s~dg-----~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINK-KFLLQLS-----GHDGGVWALKYAHGG-ILVSGSTDR-----TVRVWDIKKGCCTHV 198 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTT-EEEEEEC-----CCSSCEEEEEECSTT-EEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCC-cEEEEEe-----CCCcCEEEEEEcCCC-EEEEEeCCC-----CEEEEECCCCcEEEE
Confidence 3334444555677888776332 1112222 123568899999999 565544432 35555 23333333
Q ss_pred EecCCcccccccCCCcccceeec--CCCCeEEEEecCCCCCCCCccCCCCCCCCCCcc---------------------C
Q 004141 139 FHVPQTVHGSVYADGWFEGISWN--SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD---------------------C 195 (771)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~wS--pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 195 (771)
... ..+ .+..+.|+ |+++.|+..+.+.... .|+............ .
T Consensus 199 ~~~---h~~------~v~~l~~~~~~~~~~l~s~s~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 199 FEG---HNS------TVRCLDIVEYKNIKYIVTGSRDNTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp ECC---CSS------CEEEEEEEESSSCEEEEEEETTSCEE--EEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred ECC---CCC------ccEEEEEecCCCCCEEEEEcCCCcEE--EeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 221 111 12577777 6888888877655432 222211111000000 0
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004141 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
........+.++....+++..+..|.+||+.+++..... ......+..+.|+|||+. |+..+
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~sg~------------- 329 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKR----CISAS------------- 329 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTE----EEEEE-------------
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCE----EEEEe-------------
Confidence 000001112333334555666789999999988765541 334456888999999997 77655
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004141 276 YNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
.+..|.++|+ .+++ ...+..+...+....|+ ++.|+..+.+ ..|.+|
T Consensus 330 --~dg~i~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d-----------g~v~vw 377 (464)
T 3v7d_B 330 --MDTTIRIWDL-----------------ENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD-----------GSIRGW 377 (464)
T ss_dssp --TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT-----------SEEEEE
T ss_pred --CCCcEEEEEC-----------------CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC-----------CcEEEE
Confidence 3347888898 4444 45566666677788887 5777766654 248899
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCC
Q 004141 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN 434 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~ 434 (771)
|+.++....... ........+|++|++.|+.. . ++ .+..+|+.+|+..........
T Consensus 378 d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~~-~-dg--~i~iwd~~~g~~~~~~~~~~~ 433 (464)
T 3v7d_B 378 DANDYSRKFSYH--------------------HTNLSAITTFYVSDNILVSG-S-EN--QFNIYNLRSGKLVHANILKDA 433 (464)
T ss_dssp ETTTCCEEEEEE--------------------CTTCCCEEEEEECSSEEEEE-E-TT--EEEEEETTTCCEEESCTTTTC
T ss_pred ECCCCceeeeec--------------------CCCCccEEEEEeCCCEEEEe-c-CC--eEEEEECCCCcEEehhhccCC
Confidence 987654211000 00123456799999866543 3 44 466668889987763211111
Q ss_pred ceeeEEeecCCEEEEEEeC
Q 004141 435 FSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 435 ~~~~~~s~dg~~l~~~~~~ 453 (771)
.....++.+++.++++.+.
T Consensus 434 ~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 434 DQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp SEEEEEEEETTEEEEEEEE
T ss_pred CcEEEEEecCCEEEEEEEe
Confidence 2333444467777766654
No 382
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1.1e-08 Score=105.40 Aligned_cols=266 Identities=8% Similarity=-0.014 Sum_probs=143.4
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCc
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQT 144 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (771)
+......+.+.+|++... .....+... ...+...+|+|+|+.|+..... +.-.+|.++.......+.... .
T Consensus 32 l~s~~~dg~v~vw~~~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~-~ 102 (313)
T 3odt_A 32 VASVSRDGTVRLWSKDDQ-WLGTVVYTG-----QGFLNSVCYDSEKELLLFGGKD--TMINGVPLFATSGEDPLYTLI-G 102 (313)
T ss_dssp EEEEETTSEEEEEEESSS-EEEEEEEEC-----SSCEEEEEEETTTTEEEEEETT--SCEEEEETTCCTTSCC-CEEC-C
T ss_pred EEEEEcCCcEEEEECCCC-EEEEEeecC-----CccEEEEEECCCCCEEEEecCC--CeEEEEEeeecCCCCcccchh-h
Confidence 334445567888777332 112222222 2568889999999999877653 333344444222111111111 1
Q ss_pred ccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC-CcCcccCCccCceEEEE
Q 004141 145 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE-DWGETYAGKRQPSLFVI 223 (771)
Q Consensus 145 ~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~g~~~~~~~~~~l~v~ 223 (771)
..+ .+..+.| +++.|+..+.+.... .|+ ..........+........+.+ +....+++.....|.+|
T Consensus 103 ~~~------~i~~~~~--~~~~l~~~~~d~~i~--~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 103 HQG------NVCSLSF--QDGVVISGSWDKTAK--VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp CSS------CEEEEEE--ETTEEEEEETTSEEE--EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccc------CEEEEEe--cCCEEEEEeCCCCEE--EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 111 1246667 677777766554321 222 0000001111222222334444 44455556667889999
Q ss_pred EccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCC
Q 004141 224 NINSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 303 (771)
Q Consensus 224 d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 303 (771)
|.. .....+. ......+..+.|+|+++ ++..+ ....|+++|+
T Consensus 171 d~~-~~~~~~~-~~~~~~i~~~~~~~~~~-----~~~~~---------------~dg~i~i~d~---------------- 212 (313)
T 3odt_A 171 QND-KVIKTFS-GIHNDVVRHLAVVDDGH-----FISCS---------------NDGLIKLVDM---------------- 212 (313)
T ss_dssp ETT-EEEEEEC-SSCSSCEEEEEEEETTE-----EEEEE---------------TTSEEEEEET----------------
T ss_pred ecC-ceEEEEe-ccCcccEEEEEEcCCCe-----EEEcc---------------CCCeEEEEEC----------------
Confidence 932 2233331 22555788999999986 55444 3347888998
Q ss_pred CCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCC
Q 004141 304 SEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 382 (771)
Q Consensus 304 ~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (771)
.+++ ...+..+...+....|+|||+ |+..+.+ ..|++||+.+++..... ...
T Consensus 213 -~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~d-----------g~v~iwd~~~~~~~~~~----------~~~---- 265 (313)
T 3odt_A 213 -HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGED-----------RTVRIWSKENGSLKQVI----------TLP---- 265 (313)
T ss_dssp -TTCCEEEEEECCSSCEEEEEECTTSC-EEEEETT-----------SEEEEECTTTCCEEEEE----------ECS----
T ss_pred -CchhhhhhhhcCCceEEEEEEecCCC-EEEEecC-----------CEEEEEECCCCceeEEE----------ecc----
Confidence 4444 455556677789999999994 6655543 35899998876542111 000
Q ss_pred CcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 004141 383 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 425 (771)
Q Consensus 383 f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~ 425 (771)
...+..++|+|||+ ++ +...++...+| ++.+++.
T Consensus 266 -----~~~i~~~~~~~~~~-~~-~~~~dg~i~iw--~~~~~~~ 299 (313)
T 3odt_A 266 -----AISIWSVDCMSNGD-II-VGSSDNLVRIF--SQEKSRW 299 (313)
T ss_dssp -----SSCEEEEEECTTSC-EE-EEETTSCEEEE--ESCGGGC
T ss_pred -----CceEEEEEEccCCC-EE-EEeCCCcEEEE--eCCCCce
Confidence 01245678999998 43 34445554555 6666543
No 383
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.92 E-value=4.3e-08 Score=102.21 Aligned_cols=199 Identities=11% Similarity=0.035 Sum_probs=110.7
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC--CCCeEEEEecCCCCCCeEE
Q 004141 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~~~~~ 127 (771)
++||+.|+... ..+.+.+|++.........+. .+......+...+|+| ||+.|+.....+ .-.+|
T Consensus 20 ~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--~v~vw 86 (351)
T 3f3f_A 20 DFYGRHVATCS---------SDQHIKVFKLDKDTSNWELSD--SWRAHDSSIVAIDWASPEYGRIIASASYDK--TVKLW 86 (351)
T ss_dssp CSSSSEEEEEE---------TTSEEEEEEECSSSCCEEEEE--EEECCSSCEEEEEECCGGGCSEEEEEETTS--CEEEE
T ss_pred cCCCCEEEEee---------CCCeEEEEECCCCCCcceecc--eeccCCCcEEEEEEcCCCCCCEEEEEcCCC--eEEEE
Confidence 56777766542 335677777754432211111 1111225688999999 699988776532 23333
Q ss_pred EEecCCc-----c-eEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004141 128 ELWSQSQ-----L-EKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 128 ~~~~~~~-----~-~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
.+..+.. . ..+.... ...+ .+..+.|+|+ ++.|+..+.+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~~~l~~~~~d-------------------------- 133 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLN-DSKG------SLYSVKFAPAHLGLKLACLGND-------------------------- 133 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEEC-CCSS------CEEEEEECCGGGCSEEEEEETT--------------------------
T ss_pred ecCCCcccccccCcceeeeec-ccCC------ceeEEEEcCCCCCcEEEEecCC--------------------------
Confidence 3332211 0 2222221 1111 2368999999 9988886432
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeec----------c--CCCCCCccceEEEecC---CCCCccEEEEEeec
Q 004141 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAV----------K--GIPKSLSVGQVVWAPL---NEGLHQYLVFVGWS 264 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l----------~--~~~~~~~~~~~~wspD---g~~~~~~l~~~~~~ 264 (771)
..|.+||+.+++.... . .......+..+.|+|+ ++. |+..+.
T Consensus 134 ------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----l~~~~~- 190 (351)
T 3f3f_A 134 ------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK----LAVSAL- 190 (351)
T ss_dssp ------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE----EEEEET-
T ss_pred ------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE----EEEecC-
Confidence 5778888776653211 0 0123346778899998 664 555541
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---ceecCCCCccccceeecCCC----CEEEEEecC
Q 004141 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG----KFLVFLSAK 337 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~lt~~~~~~~~p~~SpDG----~~l~f~~~~ 337 (771)
...+...+. ..+. ...+..+...+....|+|+| +.|+..+.+
T Consensus 191 --------------~~~~~~~~~-----------------~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 191 --------------EQAIIYQRG-----------------KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp --------------TEEEEEEEC-----------------TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred --------------CCcEEEEcc-----------------CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 113333333 3333 34455566678899999999 666655544
Q ss_pred CCCCCCCccccccceeeecCCC
Q 004141 338 SSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
. .|.+||+.++
T Consensus 240 g-----------~i~iwd~~~~ 250 (351)
T 3f3f_A 240 G-----------RIRIFKITEK 250 (351)
T ss_dssp S-----------CEEEEEEEEC
T ss_pred C-----------eEEEEeCCCC
Confidence 2 4777777654
No 384
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.92 E-value=2.6e-09 Score=106.04 Aligned_cols=192 Identities=7% Similarity=-0.014 Sum_probs=109.2
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..+.||++||.+.. ...|...+..|. .+|.|+.+|++| ++. ..+++.+.++.+ . ..
T Consensus 21 ~~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g---~~~-------------~~~~~~~~i~~~---~--~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIE---EDS-------------RIEQYVSRITEI---Q--PE 76 (244)
T ss_dssp CSSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCC---STT-------------HHHHHHHHHHHH---C--SS
T ss_pred CCCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCC---HHH-------------HHHHHHHHHHHh---C--CC
Confidence 35779999997655 346777777775 689999999998 211 144555544433 1 13
Q ss_pred CeEEEEEcChhHHHHHHHHhhC---CCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCccCCCCCC-hhhH---
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-VEDL--- 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~---p~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 688 (771)
+++.++||||||.++..++.+. ++.+.++++.++....... ..... ... ...+. .+. ....
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~---~~~-----~~~~~-~~~~~~~~~~~ 144 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSI---TADTE---NDD-----SAAYL-PEAVRETVMQK 144 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCC---CCC---------------CCS-CHHHHHHHTHH
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccc---ccccc---HHH-----HHHHh-HHHHHHHHHHH
Confidence 5799999999999999998764 5678888887765321000 00000 000 00000 000 0000
Q ss_pred -HHHhhcCc-ccccCCCCCcEEEEeeC--CCCccCcHHHHHHHHHHHhC-CCCEEEEEeCCCCcc-CCCCCChHHHHHHH
Q 004141 689 -TRFHSKSP-ISHISKVKTPTIFLLGA--QDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHG-IERPQSDFESFLNI 762 (771)
Q Consensus 689 -~~~~~~sp-~~~~~~i~~P~lii~G~--~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~-~~~~~~~~~~~~~i 762 (771)
..+..... ......+++|+++++|+ +|.. +++.... +... ..++++..+++ +|. +...+....+...+
T Consensus 145 ~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~----w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i 218 (244)
T 2cb9_A 145 KRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQK----WQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANII 218 (244)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTS----SGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchhH----HHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHH
Confidence 00111000 12346788999999999 8873 3332222 2221 23588999986 883 33233444666778
Q ss_pred HHHHHHh
Q 004141 763 GLWFKKY 769 (771)
Q Consensus 763 ~~fl~~~ 769 (771)
.+||.+.
T Consensus 219 ~~~L~~~ 225 (244)
T 2cb9_A 219 LNILDKI 225 (244)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 8888643
No 385
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.92 E-value=2.6e-09 Score=118.12 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=90.4
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHH-CCcEEEEECCCCC-CCCChhhhhcCCCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRGS-LGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~Vv~~d~rG~-~~~g~~~~~~~~~~ 591 (771)
+.|.+.+ .+|.|... .++.|+||++|||++....... ......|++ .|++|+.+|||.. -||.... ..+..
T Consensus 89 ~edcl~l--nv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 162 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPEA 162 (529)
T ss_dssp CSCCCEE--EEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTS
T ss_pred CCcCCeE--EEeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCCC
Confidence 3455555 47788642 2678999999998876544322 122355555 7999999999942 1121110 00112
Q ss_pred ccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 004141 592 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++ ...|++||.|+|+|.||.++..++... ..+|+++|+.+|..
T Consensus 163 ~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2334488999999999875 247999999999999999999888753 45899999999864
No 386
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.91 E-value=2.5e-09 Score=108.65 Aligned_cols=102 Identities=17% Similarity=0.231 Sum_probs=77.5
Q ss_pred CCCcEEEEEcCCCCCCC---CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC
Q 004141 535 SCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 611 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~---~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 611 (771)
+..|+||++||.+.... ...|......|.++||.|+++|++| +|.+. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g---~g~s~----------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ---LDTSE----------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS---SSCHH----------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC---CCCch----------hhHHHHHHHHHHHHHH-
Confidence 34578999999765431 2357778889999999999999998 44332 1245555555555554
Q ss_pred CCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 612 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 612 ~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
.+.++|.|+||||||.++..++.++|+.++++|++++..
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 245689999999999999999999999999999988753
No 387
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.91 E-value=3.3e-08 Score=104.20 Aligned_cols=237 Identities=13% Similarity=0.076 Sum_probs=125.3
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCccc
Q 004141 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVH 146 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 146 (771)
..+.+.++++... .....+... ...+...+|+| +|+.|+.....+ .+.+| ..++............
T Consensus 93 ~dg~i~v~d~~~~-~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 93 SRGIIRIINPITM-QCIKHYVGH-----GNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp TTCEEEEECTTTC-CEEEEEESC-----CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEEEECSTTSCS
T ss_pred CCCEEEEEEchhc-eEeeeecCC-----CCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEEEeccccccc
Confidence 4457777776432 122222212 25688999999 899888766543 34555 2333333331101111
Q ss_pred ccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc
Q 004141 147 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 226 (771)
Q Consensus 147 g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 226 (771)
+ .+..+.|+|||+.|+..+.+ ..|.+||+.
T Consensus 162 ~------~v~~~~~~~~~~~l~~~~~d--------------------------------------------g~i~i~d~~ 191 (366)
T 3k26_A 162 D------EVLSADYDLLGEKIMSCGMD--------------------------------------------HSLKLWRIN 191 (366)
T ss_dssp S------CEEEEEECTTSSEEEEEETT--------------------------------------------SCEEEEESC
T ss_pred C------ceeEEEECCCCCEEEEecCC--------------------------------------------CCEEEEECC
Confidence 1 23689999999998886543 356666666
Q ss_pred CCceeecc---------------------------CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCC
Q 004141 227 SGEVQAVK---------------------------GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 227 ~~~~~~l~---------------------------~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
+++..... .......+..+.|+ ++. |+..+ .+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~----l~~~~---------------~d 250 (366)
T 3k26_A 192 SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL----ILSKS---------------CE 250 (366)
T ss_dssp SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE----EEEEC---------------SS
T ss_pred CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE----EEEEe---------------cC
Confidence 54322110 01134456778888 554 55554 23
Q ss_pred ceeEEEecccccchhhhhhhhcCCCC-CCcceecCCCCccccceeecCC--CCEEEEEecCCCCCCCCccccccceeeec
Q 004141 280 CALYAVRVSLYKSEASELELKESSSE-DLPVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~lt~~~~~~~~p~~SpD--G~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
..|.++|+.... ..+........ ......+..+...+....|||| |+.|+..+.+ ..|++||+
T Consensus 251 ~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----------g~i~vwd~ 316 (366)
T 3k26_A 251 NAIVCWKPGKME---DDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----------GKLYVWDL 316 (366)
T ss_dssp SEEEEEEESSTT---CCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----------SCEEEEEC
T ss_pred CEEEEEeCCCcc---ccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----------CcEEEEEC
Confidence 367777762110 00000000000 0012333344556788999999 9988876654 25899998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004141 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 416 (771)
.+++..... ...+.... ....+..++|+|||+.|+ +...++...+|
T Consensus 317 ~~~~~~~~~------~~~~~~~~-------~~~~v~~~~~s~~~~~l~-s~~~dg~i~iw 362 (366)
T 3k26_A 317 EVEDPHKAK------CTTLTHHK-------CGAAIRQTSFSRDSSILI-AVCDDASIWRW 362 (366)
T ss_dssp CSSSGGGCE------EEEECCTT-------CCSCEEEEEECTTSSEEE-EEETTSEEEEE
T ss_pred CCCCCcccc------ceEEcccc-------cCCceEEEEeCCCCCeEE-EEeCCCEEEEE
Confidence 876542210 00000000 012355788999998664 55556655555
No 388
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.90 E-value=1e-09 Score=118.47 Aligned_cols=112 Identities=9% Similarity=0.011 Sum_probs=80.4
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||++... ...|.. .+..|.+ .||.|+++|+||. |.+........ .....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~---G~S~~~~~~~~-~~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRG---SRTEYTQASYN-TRVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHH---HSSCHHHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhc---ccCchhHhHhh-HHHHHHHHHHHHHHHHHhcC
Confidence 4568999999977653 245665 4566665 4999999999984 33211000000 01224677777888865434
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.+++.|+||||||.+|+.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 567899999999999999999999999999999988764
No 389
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.89 E-value=2.9e-09 Score=117.77 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=90.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHH-HCCcEEEEECCCCC-CCCChhhhhcCCCC
Q 004141 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRGS-LGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~Vv~~d~rG~-~~~g~~~~~~~~~~ 591 (771)
+.|.+.+ .+|.|... .++.|+||++|||++....... ......|+ +.|++|+.+|||.. -||.... .....
T Consensus 91 sedcl~l--nv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 164 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEA 164 (537)
T ss_dssp CSCCCEE--EEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSS
T ss_pred CCcCCeE--EEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCC
Confidence 4455555 46778642 3678999999999876544322 12234555 78999999999942 1121110 00112
Q ss_pred ccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhh--CCCceeEEEecCCcc
Q 004141 592 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~~~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++ ...|++||.|+|+|.||.++..++.. ...+|+++|+.+|..
T Consensus 165 ~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 165 PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 2334589999999999886 24699999999999999999988764 245899999999864
No 390
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.88 E-value=8e-08 Score=112.15 Aligned_cols=241 Identities=11% Similarity=0.078 Sum_probs=141.9
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCC--CCeEEEEecCCC
Q 004141 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPEN 121 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~ 121 (771)
..-..++||+.|+... ..+.+.+|++........ .+. ...+.+...+|||+ |+.|+..+..+
T Consensus 13 ~~l~~s~dg~~latg~---------~dg~I~vwd~~~~~~~~~~~l~-----~h~~~V~~l~~s~~~~~~~l~s~s~Dg- 77 (753)
T 3jro_A 13 HDAVLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGTILASCSYDG- 77 (753)
T ss_dssp EEECCCSSSCCEEEEE---------TTTEEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCTTSCSEEEEEETTS-
T ss_pred EEEEECCCCCeEEEEE---------CCCcEEEEecCCCCCccceecc-----CCcCceEEEEecCCCCCCEEEEEeCCC-
Confidence 3344577888777653 234666666643221111 121 12256889999998 99998776543
Q ss_pred CCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCC
Q 004141 122 ESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 197 (771)
Q Consensus 122 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.+.+| ..+....+.... ...+ .+.++.|+|+ |+.|+..+.
T Consensus 78 ----~I~vwd~~~~~~~~~~~~~-~h~~------~V~~v~~sp~~~~~~l~sgs~------------------------- 121 (753)
T 3jro_A 78 ----KVLIWKEENGRWSQIAVHA-VHSA------SVNSVQWAPHEYGPLLLVASS------------------------- 121 (753)
T ss_dssp ----CEEEEEEETTEEEEEEEEC-CCSS------CEEEEEECCGGGCSEEEEEET-------------------------
T ss_pred ----eEEEEECCCCccccccccc-CCCC------CeEEEEECCCCCCCEEEEEeC-------------------------
Confidence 33444 233322222221 1111 2268999999 888888643
Q ss_pred CCCcccccCCcCcccCCccCceEEEEEccCCc---eeeccCCCCCCccceEEEec-------------CCCCCccEEEEE
Q 004141 198 WKGQGDWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFV 261 (771)
Q Consensus 198 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~---~~~l~~~~~~~~~~~~~wsp-------------Dg~~~~~~l~~~ 261 (771)
...|.+||+.++. ...+ ......+..+.|+| ||+. |+..
T Consensus 122 -------------------dg~I~vwdl~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~----l~sg 176 (753)
T 3jro_A 122 -------------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTG 176 (753)
T ss_dssp -------------------TSEEEEEECCSSSCCCCEEE--ECCSSCEEEEEECCCC---------CGGGCC----EEEE
T ss_pred -------------------CCcEEEEEeecCCCcceeEe--ecCCCceEEEEecCcccccccccccCCCCCE----EEEE
Confidence 3578999988773 2223 23445678899999 5776 7766
Q ss_pred eecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-----cceecCCCCccccceeecCC---CCEEEE
Q 004141 262 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-----PVVNLTESISSAFFPRFSPD---GKFLVF 333 (771)
Q Consensus 262 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~lt~~~~~~~~p~~SpD---G~~l~f 333 (771)
+ .+..|.++|+ .++ ....+..+...+...+|+|| |+.|+.
T Consensus 177 s---------------~dg~I~iwd~-----------------~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 177 G---------------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp E---------------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred E---------------CCCeEEEEec-----------------cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 5 2335777776 222 12345566777999999999 888877
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
.+.+. .|.+||+.++.......-. . ... +...+..++|+|||+.|+ +...++..
T Consensus 225 ~s~Dg-----------~I~iwd~~~~~~~~~~~~~-------~---~~~----~~~~v~~l~~spdg~~l~-s~s~Dg~I 278 (753)
T 3jro_A 225 VSQDR-----------TCIIWTQDNEQGPWKKTLL-------K---EEK----FPDVLWRASWSLSGNVLA-LSGGDNKV 278 (753)
T ss_dssp EESSS-----------CEEEEEESSSSSCCBCCBS-------S---SSC----CSSCCCCEEECTTTCCEE-EECSSSCE
T ss_pred EecCC-----------EEEEecCCCCCCcceeEEe-------c---cCC----CCCceEEEEEcCCCCEEE-EEcCCCEE
Confidence 66553 4888888776432110000 0 000 112456789999998664 44456665
Q ss_pred EEEEEE
Q 004141 414 VIISVN 419 (771)
Q Consensus 414 ~l~~~d 419 (771)
.+|.++
T Consensus 279 ~vwd~~ 284 (753)
T 3jro_A 279 TLWKEN 284 (753)
T ss_dssp ECCBCC
T ss_pred EEEecC
Confidence 566443
No 391
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.88 E-value=1.8e-07 Score=100.11 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=126.6
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCC----cccccccCCCcccceeecC-CCCeEEEE
Q 004141 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQ----TVHGSVYADGWFEGISWNS-DETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~wSp-Dg~~la~~ 170 (771)
+.+...+||| +|++||.....+ .+.+| ..+.......... .....-...+.+..+.|+| +++.|+..
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 5588899999 999998776532 34444 2222211111000 0000000112336899999 66666664
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecC
Q 004141 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 250 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspD 250 (771)
+. ...|.+||+.+++.... ......+....|+|+
T Consensus 119 ~~--------------------------------------------d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~ 152 (408)
T 4a11_B 119 SF--------------------------------------------DKTLKVWDTNTLQTADV--FNFEETVYSHHMSPV 152 (408)
T ss_dssp ET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEECSS
T ss_pred eC--------------------------------------------CCeEEEeeCCCCcccee--ccCCCceeeeEeecC
Confidence 32 36899999999887666 344455678889986
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCC
Q 004141 251 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGK 329 (771)
Q Consensus 251 g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~ 329 (771)
+.. ...|+..+ ....|+++|+ .++ ....+..+...+....|+|+|+
T Consensus 153 ~~~-~~~~~~~~---------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 153 STK-HCLVAVGT---------------RGPKVQLCDL-----------------KSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp CSS-CCEEEEEE---------------SSSSEEEEES-----------------SSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred CCC-CcEEEEEc---------------CCCeEEEEeC-----------------CCcceeeeecCCCCcEEEEEECCCCC
Confidence 541 01155443 3347888898 444 3556666777889999999999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce--eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004141 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~ 407 (771)
++++....+ ..|.+||+.++......... ....... ...+. .....+..++|+|||+.|+..
T Consensus 200 ~ll~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~v~~~~~~~~~~~l~~~- 263 (408)
T 4a11_B 200 YILATASAD----------SRVKLWDVRRASGCLITLDQHNGKKSQAV----ESANT-AHNGKVNGLCFTSDGLHLLTV- 263 (408)
T ss_dssp TEEEEEETT----------SCEEEEETTCSSCCSEECCTTTTCSCCCT----TTSSC-SCSSCEEEEEECTTSSEEEEE-
T ss_pred cEEEEEcCC----------CcEEEEECCCCCcccccccccccccceee----ccccc-cccCceeEEEEcCCCCEEEEe-
Confidence 754444332 34888888765421110000 0000000 00000 011234567899999976544
Q ss_pred eeCCeeEEEEEECCCCcEEE
Q 004141 408 IWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~ 427 (771)
..++. |..+|+.+++...
T Consensus 264 ~~dg~--i~vwd~~~~~~~~ 281 (408)
T 4a11_B 264 GTDNR--MRLWNSSNGENTL 281 (408)
T ss_dssp ETTSC--EEEEETTTCCBCC
T ss_pred cCCCe--EEEEECCCCccce
Confidence 44444 5555777776543
No 392
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.88 E-value=4.9e-09 Score=107.85 Aligned_cols=105 Identities=19% Similarity=0.273 Sum_probs=78.5
Q ss_pred CCCcEEEEEcCCCCCCCC----CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHc
Q 004141 535 SCDPLIVVLHGGPHSVSL----SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 610 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~----~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 610 (771)
+..|+||++||....... ..|....+.|+++||.|+++|++|. |.+.. + ....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~---g~s~~---~----~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGF---QSDDG---P----NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSS---CCSSS---T----TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCC---CCCCC---C----CCCHHHHHHHHHHHHHH
Confidence 345789999997654311 4577788999999999999999984 33211 0 12355666666655554
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
.+.+++.|+||||||.++..++.++|++++++|++++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 245789999999999999999999999999999988754
No 393
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.87 E-value=2.8e-08 Score=104.72 Aligned_cols=251 Identities=10% Similarity=0.005 Sum_probs=131.3
Q ss_pred eeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccc
Q 004141 71 KKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 147 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 147 (771)
.+.+.+|++...+... ..+... ...+...+|+|||++|+.....+ .+.+| ..+...++......+
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~v-- 130 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMH-----TGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLSSNQAIQIAQHDAPV-- 130 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEEC-----SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECSSCE--
T ss_pred CCcEEEEEcCCCCceeEEEeccc-----cCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcCCCCceeeccccCce--
Confidence 4567777775433222 222222 25688999999999998776543 55566 333433333322223
Q ss_pred cccCCCcccceee--cCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc
Q 004141 148 SVYADGWFEGISW--NSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 225 (771)
Q Consensus 148 ~~~~~~~~~~~~w--SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~ 225 (771)
..+.| +|||+.|+..+.+.... .|+............. . ............+.......+.+|++
T Consensus 131 --------~~~~~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~ 197 (368)
T 3mmy_A 131 --------KTIHWIKAPNYSCVMTGSWDKTLK--FWDTRSSNPMMVLQLP-E--RCYCADVIYPMAVVATAERGLIVYQL 197 (368)
T ss_dssp --------EEEEEEECSSCEEEEEEETTSEEE--EECSSCSSCSEEEECS-S--CEEEEEEETTEEEEEEGGGCEEEEEC
T ss_pred --------EEEEEEeCCCCCEEEEccCCCcEE--EEECCCCcEEEEEecC-C--CceEEEecCCeeEEEeCCCcEEEEEe
Confidence 68899 99999888877655322 2322111111100000 0 00111111123334445677888888
Q ss_pred cCCceeecc-CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004141 226 NSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 226 ~~~~~~~l~-~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
......... ............+.+++......++..+ .+..|.++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~dg~i~i~~~----------------- 245 (368)
T 3mmy_A 198 ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS---------------IEGRVAIHYI----------------- 245 (368)
T ss_dssp SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE---------------TTSEEEEEES-----------------
T ss_pred ccccchhhhccccccCCCceEEEcccCCCCCCeEEEec---------------CCCcEEEEec-----------------
Confidence 765432221 1122223444555555542111122222 3346777776
Q ss_pred CCCc----ceecCCCCc------------cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce
Q 004141 305 EDLP----VVNLTESIS------------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 368 (771)
Q Consensus 305 ~~~~----~~~lt~~~~------------~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 368 (771)
.... ...+..+.. .+....|||||+.|+..+.+. .|.+||+.+++.......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~- 313 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----------RFSFWDKDARTKLKTSEQ- 313 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS-----------CEEEEETTTTEEEEECCC-
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC-----------eEEEEECCCCcEEEEecC-
Confidence 2221 122222221 578899999999988777553 489999887553211110
Q ss_pred eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004141 369 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 369 ~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~ 408 (771)
+...+..++|+|||+.|+..+.
T Consensus 314 ------------------~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 314 ------------------LDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ------------------CSSCEEEEEECTTSSCEEEEEC
T ss_pred ------------------CCCCceEEEECCCCCeEEEEec
Confidence 1113457889999998776654
No 394
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.87 E-value=1.7e-09 Score=116.78 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=79.5
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~~-G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||.+... ...|.. .+..|+++ ||.|+++|+||. |.+...... .......+|+.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~---G~S~~~~~~-~~~~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSG---AKAEYTQAV-QNIRIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHH---HTSCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccc---cccccHHHH-HhHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999976653 235655 56677654 999999999984 332110000 0001124567777787765433
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.+++.|+|||+||.+|..++.++|++++++++.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 557899999999999999999999999999999988764
No 395
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.8e-07 Score=97.45 Aligned_cols=199 Identities=12% Similarity=0.059 Sum_probs=114.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCc-ccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+....|||+ .||..+... ...+|+ .+....+..+... ..+. +..++|||||+.|+..+.+
T Consensus 15 ~~v~~~~~s~~--~las~~~D~-----~i~lw~~~~~~~~~~~~~~~~~h~~~------v~~v~~sp~~~~las~s~D-- 79 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDR-----KIKLVSVKYDDFTLIDVLDETAHKKA------IRSVAWRPHTSLLAAGSFD-- 79 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSS-----CEEEEECSSSCCEEEEEECTTCCCSC------EEEEEECTTSSEEEEEETT--
T ss_pred CceeeeccCCC--EEEEEcCCC-----EEEEEEecCCCeEEEEEEecCCccCC------EEEEEECCCCCEEEEEeCC--
Confidence 44778889998 666554432 344552 2222222222112 2122 3689999999988886543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-------c-eeeccCCCCCCccceEEE
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-------E-VQAVKGIPKSLSVGQVVW 247 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-------~-~~~l~~~~~~~~~~~~~w 247 (771)
..|.+||+..+ + ...+ ......+..++|
T Consensus 80 ------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~ 115 (330)
T 2hes_X 80 ------------------------------------------STVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAW 115 (330)
T ss_dssp ------------------------------------------SCEEEEEC-------CCCEEEEEE--C----CEEEEEE
T ss_pred ------------------------------------------CcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEE
Confidence 45677776432 1 1223 233446788999
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---c-ceecCCCCcccccee
Q 004141 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---P-VVNLTESISSAFFPR 323 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~-~~~lt~~~~~~~~p~ 323 (771)
+|||+. |+..+ .+..|.++|+. .++ + ...+..+...+....
T Consensus 116 sp~g~~----las~s---------------~D~~v~iwd~~----------------~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 116 SNDGYY----LATCS---------------RDKSVWIWETD----------------ESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CTTSCE----EEEEE---------------TTSCEEEEECC----------------TTCCCCEEEEEECCCSSCEEEEE
T ss_pred CCCCCE----EEEEe---------------CCCEEEEEecc----------------CCCCCeEEEEEeccCCCceEEEE
Confidence 999997 77665 23367777762 111 1 244566677789999
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC-E
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC-T 402 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~-~ 402 (771)
|+|||+.|+..+.+. .|.+||..++.... ...+.. +...+..+.|+|++. .
T Consensus 161 ~~p~~~~l~s~s~D~-----------~i~iW~~~~~~~~~--------~~~~~~---------h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 161 WHPSEALLASSSYDD-----------TVRIWKDYDDDWEC--------VAVLNG---------HEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp ECSSSSEEEEEETTS-----------CEEEEEEETTEEEE--------EEEECC---------CSSCEEEEEECCSSSSC
T ss_pred ECCCCCEEEEEcCCC-----------eEEEEECCCCCeeE--------EEEccC---------CCCcEEEEEecCCCCee
Confidence 999999988777653 37777765432111 111100 011244567999832 3
Q ss_pred EEEEeeeCCeeEEEEEE
Q 004141 403 MLLSSIWGSSQVIISVN 419 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d 419 (771)
++++...++...||.+.
T Consensus 213 ~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEEEEeCCCeEEEEEec
Confidence 45666777888888765
No 396
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.9e-07 Score=101.33 Aligned_cols=261 Identities=10% Similarity=0.039 Sum_probs=135.7
Q ss_pred hhcccceeEEEEEEeec---CCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEE
Q 004141 65 LLANKRKKFMLSTVISK---ENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEF 139 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~ 139 (771)
+..+...+.+.+|++.. .......++.. ....+...+|+|+|+.|+..+.. +.-.+|.+. ..+...+..
T Consensus 79 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d--g~i~vwd~~~~~~~~~~~~~ 152 (437)
T 3gre_A 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYD----CSSTVTQITMIPNFDAFAVSSKD--GQIIVLKVNHYQQESEVKFL 152 (437)
T ss_dssp EEEEETTSEEEEEEHHHHHTTCCCSCSEEEE----CSSCEEEEEECTTSSEEEEEETT--SEEEEEEEEEEEETTEEEEE
T ss_pred EEEecCCceEEEeECcccccCcccceeeecc----CCCCEEEEEEeCCCCEEEEEeCC--CEEEEEEeccccCCceeecc
Confidence 33444556788887754 21011122211 12568899999999999876654 333344443 133322222
Q ss_pred ecCCccccccc----CCCccccee--ecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccC
Q 004141 140 HVPQTVHGSVY----ADGWFEGIS--WNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA 213 (771)
Q Consensus 140 ~~~~~~~g~~~----~~~~~~~~~--wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~ 213 (771)
... .+....+ .++....+. |+||++.|+..+.
T Consensus 153 ~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------------------------------- 190 (437)
T 3gre_A 153 NCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN----------------------------------------- 190 (437)
T ss_dssp EEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET-----------------------------------------
T ss_pred ccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC-----------------------------------------
Confidence 111 1100000 011112333 6677877766532
Q ss_pred CccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004141 214 GKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 214 ~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
...|.+||+.+++.... .+.+....+..++|+|||+. |+..+ .+..|.++|+
T Consensus 191 ---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----l~s~~---------------~dg~i~iwd~----- 243 (437)
T 3gre_A 191 ---LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV----LILGT---------------TRGIIDIWDI----- 243 (437)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE----EEEEE---------------TTSCEEEEET-----
T ss_pred ---CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEEEc-----
Confidence 36899999988876444 21113457889999999986 66655 3346888887
Q ss_pred hhhhhhhhcCCCCCCcc-eecC-CCCccccce----eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcc
Q 004141 293 EASELELKESSSEDLPV-VNLT-ESISSAFFP----RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 366 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~p----~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 366 (771)
..++. ..+. .+...+... .|+|||+.|+..+.+ ..|.+||+.+++......
T Consensus 244 ------------~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 244 ------------RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----------TFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp ------------TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----------EEEEEEETTTTEEEEEEE
T ss_pred ------------CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-----------CcEEEEEcCCCcEEEEEE
Confidence 44443 3332 334445555 777888877765544 358899988765322111
Q ss_pred ceeeEEecccc-cC-----CCCCcc-cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004141 367 KIVDVIPVVQC-AE-----GDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 367 ~~~~~~~~~~~-~~-----~~~f~g-~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
+.......... +. +..+.| .+...+..++|+ +++ ++++...++. |..+|+.+++...
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~--i~~wd~~~~~~~~ 364 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSS--IVMFSLNELSSSK 364 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTE--EEEEETTCGGGCE
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCe--EEEEECCCcccce
Confidence 11000000000 00 001111 122235677888 665 5556555554 5555887776443
No 397
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.86 E-value=5.6e-09 Score=107.78 Aligned_cols=122 Identities=18% Similarity=0.160 Sum_probs=86.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--------CCCcc----hHHHHHHHHCCcE---EEEECCCCCCCCChhhh
Q 004141 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--------SLSSY----SKSLAFLSSVGYS---LLIVNYRGSLGFGEEAL 585 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~--------~~~~~----~~~~~~la~~G~~---Vv~~d~rG~~~~g~~~~ 585 (771)
+.+....|. .. ..+.||++||.+... ....| ...+..|.++||. |+++|++| +|.+..
T Consensus 28 ~gG~~~~p~---~~-~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~ 100 (342)
T 2x5x_A 28 YGGFGGGSC---TA-TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS---SSEQGS 100 (342)
T ss_dssp SCEEECCSS---CC-CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC---HHHHTC
T ss_pred cCcccCCCC---CC-CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC---CCccCC
Confidence 345555554 22 334599999976632 13356 6788899999998 99999998 444321
Q ss_pred hcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCccc
Q 004141 586 QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 652 (771)
Q Consensus 586 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~~ 652 (771)
... ........+++.+.++.+.+.. +.+++.|+||||||.++..++.++ |++++++|+.+|...
T Consensus 101 ~~~-~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 101 AQY-NYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp GGG-CCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 110 0112234677888888877652 347899999999999999999988 889999999988654
No 398
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.85 E-value=1.2e-06 Score=90.13 Aligned_cols=244 Identities=14% Similarity=0.086 Sum_probs=146.7
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.....|||++ .||...+. ...+| ..++..++...... .+ .+.++.|+|||++|+..+.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~------tV~iWd~~tg~~~~~~~~~~~-~~------~V~~v~~~~~~~~l~sgs~------ 87 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS------ 87 (318)
T ss_dssp CBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET------
T ss_pred ceEEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecCC-CC------eEEEEEECCCCCEEEEEEC------
Confidence 3568999987 67764321 35567 35555555543211 11 2268999999999987643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
+..|.+||+.+++.... .... ......++++++. +
T Consensus 88 --------------------------------------Dg~v~iw~~~~~~~~~~--~~~h-~~~~~~~~~~~~~----l 122 (318)
T 4ggc_A 88 --------------------------------------SAEVQLWDVQQQKRLRN--MTSH-SARVGSLSWNSYI----L 122 (318)
T ss_dssp --------------------------------------TSEEEEEETTTTEEEEE--EECC-SSCEEEEEEETTE----E
T ss_pred --------------------------------------CCcEEEeecCCceeEEE--ecCc-cceEEEeecCCCE----E
Confidence 25789999999876554 2221 2233467777775 5
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004141 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
+..+ ....+..++... .......+..+...+....|+++|+.|+..+.+.
T Consensus 123 ~s~~---------------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 123 SSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEe---------------cCCceEeeecCC---------------CceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 5443 222455555410 1122344555666788899999999888766553
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004141 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.+++.......... . ....+....|++++..++..........+..+
T Consensus 173 -----------~i~iwd~~~~~~~~~~~~~~~-----------~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 173 -----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp -----------CEEEEESSCBTTBSCCSEEEC-----------C----CCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred -----------ceeEEECCCCcccccceeeec-----------c----cCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 488889887654322111100 0 00123456688888777766554444456666
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+..++................++++++.+++.....+ ..|++.++.+
T Consensus 227 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d--~~i~iwd~~~ 273 (318)
T 4ggc_A 227 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPT 273 (318)
T ss_dssp ETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTT
T ss_pred ecccccccccccceeeeeeeeecccccceEEEEEcCC--CEEEEEECCC
Confidence 8877777666555555666788999998877654333 3466666543
No 399
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.85 E-value=4.6e-07 Score=95.75 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=52.5
Q ss_pred eeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg 400 (771)
..++|||++|+....... .+.|. ....|+++|+.+++.. ..+... .....+.|+|||
T Consensus 272 ~~~s~d~~~lyV~~~~~~--~~~~~~~~~~V~VID~~t~~vv----------~~i~~g----------~~p~~i~~s~Dg 329 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQS--AWKLHAAAKEVTSVTGLVGQTS----------SQISLG----------HDVDAISVAQDG 329 (373)
T ss_pred EEECCCCCEEEEEeccCC--cccccCCCCeEEEEECCCCEEE----------EEEECC----------CCcCeEEECCCC
Confidence 578999998766544310 01111 2357999998876641 111110 024577899999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004141 401 CTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
+++++..+. +...|..+|++++++...
T Consensus 330 ~~~l~v~~~-~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 330 GPDLYALSA-GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEcC-CCCeEEEEECCCCCEEee
Confidence 966666543 335799999999987765
No 400
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.84 E-value=2.4e-07 Score=97.68 Aligned_cols=98 Identities=14% Similarity=0.046 Sum_probs=57.9
Q ss_pred eeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg 400 (771)
.+++|||++++.....+.. .|.+. ....|+++|+.+++.. ..+... . ...++|+|||
T Consensus 259 ~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v----------~~i~~~----------~-p~~ia~spdg 316 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRV----------ARIPGR----------D-ALSMTIDQQR 316 (361)
T ss_dssp EEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEE----------EEEECT----------T-CCEEEEETTT
T ss_pred EEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEE----------EEEecC----------C-eeEEEECCCC
Confidence 6899999987655431100 01111 1357999998876531 111110 1 3467899999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCC--cEEEe-cCCCCCceeeEEeecCC
Q 004141 401 CTMLLSSIWGSSQVIISVNVSSG--ELLRI-TPAESNFSWSLLTLDGD 445 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg--~~~~l-~~~~~~~~~~~~s~dg~ 445 (771)
++||.+ +. ..|..+|++++ ++... ...........++|+|+
T Consensus 317 ~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 317 NLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 977644 33 55777799999 55433 33333345667888886
No 401
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.84 E-value=7.6e-09 Score=115.58 Aligned_cols=118 Identities=17% Similarity=0.165 Sum_probs=81.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCcc-hHHHHHHH-HCCcEEEEECCC-CCCCCChhhh---h-cCCCCccccchhhHHHHHHH
Q 004141 534 CSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYR-GSLGFGEEAL---Q-SLPGKVGSQDVNDVLTAIDH 606 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~Vv~~d~r-G~~~~g~~~~---~-~~~~~~~~~~~~D~~~~i~~ 606 (771)
.++.|+||++|||++....... ......|+ ..|++|+.+||| |.-||..... . ......+...+.|+.++++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4678999999999876544321 12234554 479999999999 3222221100 0 01111233348899999999
Q ss_pred HHHcC---CCCCCeEEEEEcChhHHHHHHHHhhC--CCceeEEEecCCcc
Q 004141 607 VIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 607 l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~~~v~~~p~~ 651 (771)
+.++. ..|+++|.|+|+|.||.++..++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 98862 36899999999999999998877652 36899999988854
No 402
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.83 E-value=2.2e-09 Score=119.70 Aligned_cols=130 Identities=20% Similarity=0.228 Sum_probs=86.2
Q ss_pred cCCCceEEEEEEecCCCC---CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC-CcEEEEECCCCCC-CCChhhhhcCC
Q 004141 515 KGAQKPFEAIFVSSSHKK---DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-GYSLLIVNYRGSL-GFGEEALQSLP 589 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~---~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~-G~~Vv~~d~rG~~-~~g~~~~~~~~ 589 (771)
+.|.+.+ .+|.|.... ..++.|+||++|||++......... ...|+++ |++|+.+|||... ||..... .
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~-~~~la~~~~~vvv~~~YRl~~~Gfl~~~~---~ 181 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYD-GSVLASYGNVIVITVNYRLGVLGFLSTGD---Q 181 (574)
T ss_dssp CSCCCEE--EEEEEC--------CCEEEEEECCCSSSSSCCGGGSC-CHHHHHHHTCEEEEECCCCHHHHHCCCSS---S
T ss_pred CCcCCEE--EEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccC-chhhhccCCEEEEEeCCcCcccccCcCCC---C
Confidence 3455444 578887431 2356899999999987665432111 2345554 6999999999421 1111100 0
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHhhCC---CceeEEEecCCc
Q 004141 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPL 650 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~p~ 650 (771)
...+...+.|+.++++|+.++ ...|+++|.|+|+|.||.++..++.... .+|+++|+.++.
T Consensus 182 ~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 182 AAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 112234589999999999885 2469999999999999999998887543 568999988763
No 403
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.82 E-value=8.9e-08 Score=102.48 Aligned_cols=258 Identities=14% Similarity=0.057 Sum_probs=122.1
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcce--EEEecCCcccccccCCCcccceeecC--------CCCeEEEE
Q 004141 103 AVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLE--KEFHVPQTVHGSVYADGWFEGISWNS--------DETLIAYV 170 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~wSp--------Dg~~la~~ 170 (771)
...++|+++.||..+... ...+| ..+... .......+..+.| ..++|+| ||+.||..
T Consensus 94 ~~~~~~~~~~las~~~d~-----~v~lw~~~~~~~~~~~~~~~~~gH~~~v------~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDN-----TVRLIITKNETIITQHVLGGKSGHHNFV------NDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp ---CCEEEEEEEEEETTS-----CEEEEEEETTEEEEEEEECTTTSCSSCE------EEEEEEEEECTTCSEEEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCC-----cEEEEECCCCccceeeeecccCCCCCce------EEEEEccccccccCCCCCEEEEE
Confidence 345567777777665433 34444 222222 2222222333333 7899998 89988887
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCCCCccceEEEec
Q 004141 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAP 249 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wsp 249 (771)
+.+ ..|.+||+.++.. ..+ ......+..++|+|
T Consensus 163 s~D--------------------------------------------~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~p 196 (393)
T 4gq1_A 163 GDD--------------------------------------------CTLIIWRLTDEGPILAG--YPLSSPGISVQFRP 196 (393)
T ss_dssp ETT--------------------------------------------SEEEEEEEETTEEEEEE--EECSSCEEEEEEET
T ss_pred ECC--------------------------------------------CeEEEEECCCCceeeee--cCCCCCcEEEEECC
Confidence 543 5789999977654 333 34445677899999
Q ss_pred CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC-------C---CcceecCCCCccc
Q 004141 250 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-------D---LPVVNLTESISSA 319 (771)
Q Consensus 250 Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-------~---~~~~~lt~~~~~~ 319 (771)
++.. ++.++. .+..|.++|+........... ...... . ........+...+
T Consensus 197 ~~~~----~l~~~~--------------~d~~v~~wd~~t~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 197 SNPN----QLIVGE--------------RNGNIRIFDWTLNLSAEENSQ-TELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp TEEE----EEEEEE--------------TTSEEEEEETTCCC-----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred CCCc----eEEecC--------------CCCEEEEEECCCCcccccccc-cCCcccceEEecccccceeeeecccccccc
Confidence 9875 555542 223566777621100000000 000000 0 0000111233345
Q ss_pred cceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc-cCCCCCCccc
Q 004141 320 FFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY-SSSILSNPWL 397 (771)
Q Consensus 320 ~~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~-~~~~~~~~~s 397 (771)
....|+ |||+.|+-.+.+. .+.+||+.++............+..+.. .....+.- ........|+
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~-----------~i~vwd~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSG-----------AWLRWNLFANNDYNEISDSTMKLGPKNL--LPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp SEEEEETTTTCEEEEECTTS-----------EEEEEEC-------------------CC--SCSEEEECSSCCSSCCEEC
T ss_pred eeeeeecCCCCEEEEEeCCC-----------CEEEEECccCCCCceEeeecCccccEEE--ccccccccccCcceeEEEc
Confidence 667776 8999988766543 4778887765542211111000000000 00000000 0011233344
Q ss_pred c-CCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeeEEeecCCEEEEEE
Q 004141 398 S-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 398 ~-Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
+ .++.++.+...++.. ..+|..+++.... ......+....|+|||+.|+...
T Consensus 325 ~~~~~~~~~sgs~Dg~V--~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLI--QLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp SSCTTEEEEEETTTTEE--EEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCEEEEEECCCCEE--EEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3 444455555555554 4457777764433 33334566679999999887654
No 404
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.82 E-value=1.2e-08 Score=106.14 Aligned_cols=210 Identities=11% Similarity=0.061 Sum_probs=113.0
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHH-HHHHHHcCCCC
Q 004141 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLAN 614 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~~~~d 614 (771)
..|.|+++||.+.. ...|...+..| ..+|.|+.+|++| +|.+... . ..++++.+. ++.+.+.. .
T Consensus 100 ~~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g---~~~~~~~--~-----~~~~~~a~~~~~~i~~~~--~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPR---PNGPMQT--A-----ANLDEVCEAHLATLLEQQ--P 164 (329)
T ss_dssp SSCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCT---TTSHHHH--C-----SSHHHHHHHHHHHHHHHC--S
T ss_pred CCCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCC---CCCCCCC--C-----CCHHHHHHHHHHHHHHhC--C
Confidence 45789999997665 34566666666 5689999999998 4433211 1 124444433 33333331 2
Q ss_pred CCeEEEEEcChhHHHHHHHHhh---CCCceeEEEecCCccchhhhhcCC-----CCCcchhhhh-ccCCCCccCCCCCCh
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPLCNLALMVGTT-----DIPDWCYVES-YGSKGKDSFTESPSV 685 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~---~p~~~~~~v~~~p~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~ 685 (771)
..++.|+||||||.++..++.+ +|+.++.+++..+........... +......... ..............
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTST- 243 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCC-
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccH-
Confidence 3589999999999999999998 899999999888765432111000 0000000000 00000000000011
Q ss_pred hhHHHH----hhc-C--cccccCCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc-CCCCCChHH
Q 004141 686 EDLTRF----HSK-S--PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG-IERPQSDFE 757 (771)
Q Consensus 686 ~~~~~~----~~~-s--p~~~~~~i~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~-~~~~~~~~~ 757 (771)
.....+ ... . .......+.+|++++.|+.|..++......+.+.. .+++++.++ ++|. +..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~----~~~~~~~v~-g~H~~~~~~~~~~~ 318 (329)
T 3tej_A 244 ELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI----AELDIYRQD-CAHVDIISPGTFEK 318 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE----EEEEEEEES-SCGGGGGSTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc----CCcEEEEec-CChHHhCCChHHHH
Confidence 111110 000 0 00113456789999999999887765443332222 358888897 5776 333333334
Q ss_pred HHHHHHHHH
Q 004141 758 SFLNIGLWF 766 (771)
Q Consensus 758 ~~~~i~~fl 766 (771)
+...+.+||
T Consensus 319 ia~~l~~~L 327 (329)
T 3tej_A 319 IGPIIRATL 327 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 444454454
No 405
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.81 E-value=3.9e-09 Score=109.48 Aligned_cols=208 Identities=13% Similarity=0.091 Sum_probs=112.0
Q ss_pred EEEEEcC--CCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHH-HHHHHcCCCCC
Q 004141 539 LIVVLHG--GPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGLANP 615 (771)
Q Consensus 539 ~vv~~HG--g~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~d~ 615 (771)
.|+++|| ++.. ...|...+..|. .+|.|+.+|++|. |.+... ........++++.+.+ +.+... ...
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~l~~~L~-~~~~v~~~d~~G~---g~~~~~--~~~~~~~~~~~~a~~~~~~i~~~--~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLRLSTSFQ-EERDFLAVPLPGY---GTGTGT--GTALLPADLDTALDAQARAILRA--AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHHHHHTTT-TTCCEEEECCTTC---CBC-----CBCCEESSHHHHHHHHHHHHHHH--HTT
T ss_pred cEEEeCCCCCCCc--HHHHHHHHHhcC-CCCceEEecCCCC---CCCccc--ccCCCCCCHHHHHHHHHHHHHHh--cCC
Confidence 7999997 3332 346777777775 7899999999994 432000 0001112233333322 222222 123
Q ss_pred CeEEEEEcChhHHHHHHHHhhC----CCceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCccCCCCCChhhH-
Q 004141 616 SKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPSVEDL- 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~----p~~~~~~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 688 (771)
.++.|+|||+||.+|..+|.+. ++.++++++.++........ ...+. +....... .+.. ......
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~----~~~~~~~l~~~~~~~---~~~~-~~~~~~~ 232 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP----IEVWSRQLGEGLFAG---ELEP-MSDARLL 232 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----HHHTHHHHHHHHHHT---CSSC-CCHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----HHHHHHHhhHHHHHh---hccc-cchHHHH
Confidence 6799999999999999999876 45688888877643210000 00000 00000000 0000 011111
Q ss_pred --HHHhhcCcccccCCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHH
Q 004141 689 --TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 765 (771)
Q Consensus 689 --~~~~~~sp~~~~~~i~~P~lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~f 765 (771)
..+...........+++|+++++| .|..+++.. ...+.+. ...+++++.++ ++|.....+....+...+.+|
T Consensus 233 ~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 233 AMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHH
Confidence 111110001124678899999999 999888764 2222111 12246888898 589743322556788888899
Q ss_pred HHHh
Q 004141 766 FKKY 769 (771)
Q Consensus 766 l~~~ 769 (771)
|++.
T Consensus 308 L~~~ 311 (319)
T 2hfk_A 308 LDAI 311 (319)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8764
No 406
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.79 E-value=2.2e-08 Score=107.02 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCCCCCCcc--hHHHHHH-HHCCcEEEEECCCCCCCCChhhhhcC-----CCCcc----ccchhhHHHH
Q 004141 536 CDPLIVVLHGGPHSVSLSSY--SKSLAFL-SSVGYSLLIVNYRGSLGFGEEALQSL-----PGKVG----SQDVNDVLTA 603 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~--~~~~~~l-a~~G~~Vv~~d~rG~~~~g~~~~~~~-----~~~~~----~~~~~D~~~~ 603 (771)
..| ||++|||.+.... .+ ......+ .+.|+.|+++|+|| ||.+..... ..+.+ .+.++|+...
T Consensus 38 g~P-i~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg---~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 38 GGS-ILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRY---YGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TCE-EEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTT---STTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCC---CCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 346 6777888764321 11 1123333 34589999999999 555532110 11111 2346788888
Q ss_pred HHHHHHcC-CCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCC
Q 004141 604 IDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 649 (771)
Q Consensus 604 i~~l~~~~-~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p 649 (771)
++++.... .....++.++||||||.+|++++.++|+++.++|+.++
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 88887652 22345899999999999999999999999999988664
No 407
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.79 E-value=1.2e-07 Score=101.44 Aligned_cols=90 Identities=6% Similarity=0.024 Sum_probs=49.9
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC--------CCCeEEEEecCCCCCCeEEEEec---CC
Q 004141 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--------SGSKLLVVRNPENESPIQFELWS---QS 133 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP--------dG~~la~~~~~~~~~~~~~~~~~---~~ 133 (771)
++.....+.+.+|++..... ..+.....+....+.+...+||| ||+.||-.+.+. ...+|+ ++
T Consensus 104 las~~~d~~v~lw~~~~~~~-~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~~Wd~~~~~ 177 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETI-ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLIIWRLTDEG 177 (393)
T ss_dssp EEEEETTSCEEEEEEETTEE-EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEEEEEEETTE
T ss_pred EEEEeCCCcEEEEECCCCcc-ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC-----eEEEEECCCCc
Confidence 33334445666666643321 11111123333446788999998 999999877654 566663 22
Q ss_pred cceEEEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004141 134 QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 134 ~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
....+......+ .+++|+|++..++.+
T Consensus 178 ~~~~~~~~~~~v----------~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 178 PILAGYPLSSPG----------ISVQFRPSNPNQLIV 204 (393)
T ss_dssp EEEEEEECSSCE----------EEEEEETTEEEEEEE
T ss_pred eeeeecCCCCCc----------EEEEECCCCCceEEe
Confidence 222333333332 589999998754443
No 408
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=1.7e-06 Score=90.32 Aligned_cols=101 Identities=15% Similarity=0.070 Sum_probs=61.8
Q ss_pred cceeecCCCCEEEEEecCCCCCCCCccc-cccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 320 FFPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 320 ~~p~~SpDG~~l~f~~~~~~~~~g~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....++||+++|+...+... .|.|.. ..+|+++|+.+++...- +... ....++.+|+
T Consensus 283 q~~a~~~~~~~lyV~~~~~~--~~~hk~~~~~V~viD~~t~kv~~~----------i~vg----------~~~~~lavs~ 340 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRD--EWRHKTASRFVVVLDAKTGERLAK----------FEMG----------HEIDSINVSQ 340 (386)
T ss_dssp SCEEEETTTTEEEEEEEECC--TTCTTSCEEEEEEEETTTCCEEEE----------EEEE----------EEECEEEECS
T ss_pred ceeeECCCCCeEEEEecccc--ccccCCCCCEEEEEECCCCeEEEE----------EECC----------CCcceEEECC
Confidence 34677999999877654321 133332 46899999998775221 1000 0134678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeec
Q 004141 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 443 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d 443 (771)
|++.++|.++ .....+..+|..++++..-....+......+++|
T Consensus 341 D~~~~ly~tn-~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 341 DEKPLLYALS-TGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp SSSCEEEEEE-TTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCeEEEEEc-CCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 9985555554 3345688899999987765544443344555554
No 409
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.75 E-value=9.8e-08 Score=105.65 Aligned_cols=164 Identities=9% Similarity=-0.042 Sum_probs=98.3
Q ss_pred ceEEEEEccCCcee------------eccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 218 PSLFVININSGEVQ------------AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 218 ~~l~v~d~~~~~~~------------~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
..|.+||+.+++.. .+ ......+..++|+|++ . |+..+ .+..|.++
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l--~~h~~~v~sv~~s~~~-~----lasgs---------------~DgtV~lW 292 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTL--SLADSLITTFDFLSPT-T----VVCGF---------------KNGFVAEF 292 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEE--CCTTTCEEEEEESSSS-E----EEEEE---------------TTSEEEEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEE--EcCCCCEEEEEecCCC-e----EEEEe---------------CCCEEEEE
Confidence 46777887665321 22 2234467789999864 4 66554 33478888
Q ss_pred ecccccchhhhhhhhcCCCCCCc--ceecCCCCccccce--eecCCC-CEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 286 RVSLYKSEASELELKESSSEDLP--VVNLTESISSAFFP--RFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~~~~~p--~~SpDG-~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
|+ .++. ...+..+...+.+. .|+||| +.|+..+.+. .|.+||+.+++
T Consensus 293 D~-----------------~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-----------tvklWD~~~~~ 344 (524)
T 2j04_B 293 DL-----------------TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-----------YFYIFNPKDIA 344 (524)
T ss_dssp ET-----------------TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-----------EEEEECGGGHH
T ss_pred EC-----------------CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-----------eEEEEECCCCC
Confidence 88 4332 23455666678887 689998 7777666553 58888887644
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeeE
Q 004141 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSL 439 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~ 439 (771)
......+. .. ...+..++|+||++.++ ++..++. +..+|+.++.. ..+......+....
T Consensus 345 ~~~~~~~~--------------~~---~~~v~~v~fsp~~~~l~-s~~~d~t--v~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 TTKTTVSR--------------FR---GSNLVPVVYCPQIYSYI-YSDGASS--LRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp HHCEEEEE--------------CS---CCSCCCEEEETTTTEEE-EECSSSE--EEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred cccccccc--------------cc---cCcccceEeCCCcCeEE-EeCCCCc--EEEEECcccccceeeecCCCceEEEE
Confidence 31110000 00 01245688999998654 4444444 44457777664 44555555566678
Q ss_pred EeecCCEEEEEE
Q 004141 440 LTLDGDNIIAVS 451 (771)
Q Consensus 440 ~s~dg~~l~~~~ 451 (771)
|+|+|+.|+..+
T Consensus 405 ~Sp~g~~l~Sgs 416 (524)
T 2j04_B 405 VSRLHPMVLAGS 416 (524)
T ss_dssp CCSSCCBCEEEE
T ss_pred eCCCCCeEEEEE
Confidence 899888665433
No 410
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.75 E-value=3.9e-07 Score=95.95 Aligned_cols=188 Identities=14% Similarity=0.136 Sum_probs=107.4
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.+....++++++.++++...+ ..+.+|+ .++..........+ ..+.|++++. +...+. .
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v----------~~v~~~~~~~--~~~~~~-~-- 120 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPV----------KDLFLSREFI--VVSYGD-V-- 120 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCE----------EEEEECSSEE--EEEETT-E--
T ss_pred CeEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCce----------EEEEEcCCEE--EEEEcC-E--
Confidence 366788999999998775433 2566773 33333333332222 5788888753 322221 1
Q ss_pred CCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccC--CccCceEEEEEccCCc-----------------eeeccCCC
Q 004141 178 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYA--GKRQPSLFVININSGE-----------------VQAVKGIP 237 (771)
Q Consensus 178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~--~~~~~~l~v~d~~~~~-----------------~~~l~~~~ 237 (771)
...|+.... ........ ..+...+.+ ..... +.....|.+||+.+++ ...+ ..
T Consensus 121 i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~ 193 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KA 193 (355)
T ss_dssp EEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE--CC
T ss_pred EEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--Ec
Confidence 112221111 00000000 001111221 11111 3456789999998875 4555 34
Q ss_pred CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce-eEEEecccccchhhhhhhhcCCCCCCc-ceecC-C
Q 004141 238 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP-VVNLT-E 314 (771)
Q Consensus 238 ~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt-~ 314 (771)
....+..++|||||+. |+..+ .+.. |.++|+ .+++ ...+. .
T Consensus 194 h~~~v~~~~~s~~g~~----l~s~s---------------~d~~~v~iwd~-----------------~~~~~~~~~~~g 237 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDM----VATCS---------------QDGTIIRVFKT-----------------EDGVLVREFRRG 237 (355)
T ss_dssp CSSCEEEEEECTTSSE----EEEEE---------------TTCSEEEEEET-----------------TTCCEEEEEECT
T ss_pred cCCceEEEEECCCCCE----EEEEe---------------CCCCEEEEEEC-----------------CCCcEEEEEEcC
Confidence 5557889999999997 77665 2335 888887 5554 34454 2
Q ss_pred -CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 315 -SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 315 -~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+...+.+.+|||||+.|+..+.+. .|.+||+..+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~-----------~v~iw~~~~~~ 273 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKW-----------TLHVFEIFNDQ 273 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTC-----------EEEEEESSCCS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCC-----------EEEEEEccCCC
Confidence 566789999999999998877653 48888886654
No 411
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.75 E-value=3.6e-07 Score=99.12 Aligned_cols=205 Identities=10% Similarity=0.070 Sum_probs=118.4
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEec--C---Cc-c--eEEEecCCcccccccCCCcccceeecCCCCeEEE
Q 004141 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--Q---SQ-L--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 169 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~~--~---~~-~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~ 169 (771)
+.+...+||| ||++||..+..+ .+.+|+ . +. . ......... +.+++|+||++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDCSST----------VTQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEECSSC----------EEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccCCCC----------EEEEEEeCCCCEEEE
Confidence 4588999999 999998876543 555662 2 21 1 111121222 269999999999888
Q ss_pred EecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc---CCceeecc---------CCC
Q 004141 170 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ---SGEVQAVK---------GIP 237 (771)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~---~~~~~~l~---------~~~ 237 (771)
.+.+ ..|.+||+. .++..... ..+
T Consensus 129 ~s~d--------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 129 SSKD--------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred EeCC--------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 6543 467778773 44332220 001
Q ss_pred --CCCccceEE--EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceec
Q 004141 238 --KSLSVGQVV--WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 312 (771)
Q Consensus 238 --~~~~~~~~~--wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~l 312 (771)
....+..+. |+||++. |+..+ .+..|.++|+ .+++ ...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~ 208 (437)
T 3gre_A 165 FGKNEYAVRMRAFVNEEKSL----LVALT---------------NLSRVIIFDI-----------------RTLERLQII 208 (437)
T ss_dssp GSSCCCEEEEEEEECSSCEE----EEEEE---------------TTSEEEEEET-----------------TTCCEEEEE
T ss_pred cccccCceEEEEEEcCCCCE----EEEEe---------------CCCeEEEEeC-----------------CCCeeeEEE
Confidence 111222222 5677775 55554 3347899998 5554 3444
Q ss_pred CC--CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC-c-cceeeEEecccccCCCCCccccc
Q 004141 313 TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L-EKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 313 t~--~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~-~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
.. +...+....|+|||+.|+..+.+. .|.+||+.++..... . .....+..+
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~v~~~-------------- 263 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRG-----------IIDIWDIRFNVLIRSWSFGDHAPITHV-------------- 263 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEEEBCTTCEEEEEE--------------
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCC-----------eEEEEEcCCccEEEEEecCCCCceEEE--------------
Confidence 44 456788999999999988777653 488999887553211 0 111011100
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004141 389 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 389 ~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
...+.|++|++.| ++...++ .|..+|+.+++....
T Consensus 264 --~~~~~~s~~~~~l-~s~~~dg--~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 264 --EVCQFYGKNSVIV-VGGSSKT--FLTIWNFVKGHCQYA 298 (437)
T ss_dssp --EECTTTCTTEEEE-EEESTTE--EEEEEETTTTEEEEE
T ss_pred --EeccccCCCccEE-EEEcCCC--cEEEEEcCCCcEEEE
Confidence 0133677888644 4444343 566668887775443
No 412
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.74 E-value=9.5e-07 Score=90.22 Aligned_cols=252 Identities=9% Similarity=-0.044 Sum_probs=135.0
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004141 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
|.+++||+.|.++... .+.|+.++. .++ ...+.... ......+++|||+.++.. . +...+
T Consensus 33 ~~~d~~g~~l~~~~~~--------~~~i~~~~~--~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~-~---~~~~i 92 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVR--------QNRTWAWSD--DGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACS-H---GLRRL 92 (296)
T ss_dssp EEEEGGGTEEEEEEGG--------GTEEEEEET--TSC-EEEEESSC-----SSEEEEEECTTCCEEEEE-T---TTTEE
T ss_pred CeEeCCCCEEEEEeCC--------CCEEEEEEC--CCC-eEEEECCC-----CCcceeeECCCCcEEEEe-c---CCCeE
Confidence 3345677766665422 246777664 222 33332221 346778999999854332 2 22356
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC-CCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004141 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+.++ ..++.+.+........ ......+.++|||+ |++.... .... .+.
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~vtd~~~g~~~--~~~---------------------- 142 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKK-----LNSPNDVCLAPDGS-LWFSDPTYGIDK--PEE---------------------- 142 (296)
T ss_dssp EEECSTTCCEEEEECEETTEE-----CCCCCCEEECTTSC-EEEEECSHHHHC--GGG----------------------
T ss_pred EEEcCCCCcEEEEeeccCCCC-----CCCCCCEEECCCCC-EEEECCcccccc--ccc----------------------
Confidence 6666 3666554443211110 00124789999997 4442100 0000 000
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004141 205 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
+...........||.++.+ ++.+.+ .........++|+|||+. | ++.. ....|++
T Consensus 143 ---~~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~----l-v~~~--------------~~~~i~~ 197 (296)
T 3e5z_A 143 ---GYGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNL----L-VSDT--------------GDNATHR 197 (296)
T ss_dssp ---SSCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCE----E-EEET--------------TTTEEEE
T ss_pred ---cccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCE----E-EEeC--------------CCCeEEE
Confidence 0000001123589999987 666666 333345678999999996 6 4431 2337888
Q ss_pred EecccccchhhhhhhhcCCCCCCcc----eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 285 VRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~~----~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+++. ..+.. +.+..........++++||+ |+... . ..|+++|.++..
T Consensus 198 ~~~~----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~-~-----------~~v~~~~~~g~~ 248 (296)
T 3e5z_A 198 YCLN----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA-G-----------DGVHVLTPDGDE 248 (296)
T ss_dssp EEEC----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-T-----------TEEEEECTTSCE
T ss_pred EEEC----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-C-----------CeEEEECCCCCE
Confidence 8872 13333 22222233456789999998 44333 2 248888875321
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCcc-ccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004141 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW-LSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~-s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
...+ ..+. .+..++| ++|++.|++++. ..||++++++++++.
T Consensus 249 ~~~~-----------~~~~----------~~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 249 LGRV-----------LTPQ----------TTSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGLEH 291 (296)
T ss_dssp EEEE-----------ECSS----------CCCEEEEESTTSCEEEEEET----TEEEEEECSCCBCCC
T ss_pred EEEE-----------ECCC----------CceeEEEECCCCCEEEEEcC----CeEEEEEcccccccc
Confidence 1111 0000 1345678 689998887764 379999998887653
No 413
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.74 E-value=2e-06 Score=90.31 Aligned_cols=200 Identities=11% Similarity=-0.013 Sum_probs=99.5
Q ss_pred cCceEEEEEccCCceeeccCCCCC----CccceEEEecCCCCCccEEEEEeecCcc--eeeeeeeec---cCCceeEEEe
Q 004141 216 RQPSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSET--RKLGIKYCY---NRPCALYAVR 286 (771)
Q Consensus 216 ~~~~l~v~d~~~~~~~~l~~~~~~----~~~~~~~wspDg~~~~~~l~~~~~~~~~--~~~g~~~~~---~~~~~l~~~d 286 (771)
....|.++|.++.+++.- .+.. ...-++.|+||++ +++++++..+ ++.|+.... ....+|..+|
T Consensus 162 ~~g~v~vlD~~T~~v~~~--~~~~~~~~~~~Yd~~~~p~~~-----~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D 234 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGK--WEIDRGDQYLAYDFWWNLPNE-----VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD 234 (462)
T ss_dssp SCCEEEEECTTTCCEEEE--CCSBCTTCCCCCCEEEETTTT-----EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred CCCeEEEEECCCCeEEEE--EccCCCCccccceEEECCCCC-----EEEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence 457899999999887655 2211 1233588999999 4555543321 111211100 2345899999
Q ss_pred cccccchhhhhhhhcCCCCCCcc-eecCCC-C-ccccce--eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 287 VSLYKSEASELELKESSSEDLPV-VNLTES-I-SSAFFP--RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~-~-~~~~~p--~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+ .+++. ..+.-+ . ...... .|+|||++++....-.. ..-.++|+++..+.+..
T Consensus 235 ~-----------------~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-----~~Lss~V~v~~~d~g~~ 292 (462)
T 2ece_A 235 L-----------------RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-----KDLSSSIWLWFYEDGKW 292 (462)
T ss_dssp T-----------------TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-----TTCCEEEEEEEEETTEE
T ss_pred C-----------------CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-----cCCCceEEEEEecCCce
Confidence 8 44432 233322 1 123333 45999997554443000 00124566655544321
Q ss_pred CCCccceeeEEecccccCCCCCcccc------cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC-CCcEE---EecCC
Q 004141 362 FSSLEKIVDVIPVVQCAEGDCFPGLY------SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS-SGELL---RITPA 431 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~-tg~~~---~l~~~ 431 (771)
.. ..++++-...-.+..|.+. ......+.+|+||++||++....+. |..+++. .++.+ .+...
T Consensus 293 ~~-----~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~--VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 293 NA-----EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE--VRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EE-----EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE--EEEEECSSTTSCEEEEEEECB
T ss_pred eE-----EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE--EEEEEecCCCCcEEEEEEEeC
Confidence 10 1111111100001111000 1134577899999998877654444 4444542 33333 22222
Q ss_pred C--------------CCceeeEEeecCCEEEEEE
Q 004141 432 E--------------SNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 432 ~--------------~~~~~~~~s~dg~~l~~~~ 451 (771)
. +......+|+||++|+++.
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0 0134568899999988776
No 414
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.74 E-value=1.2e-06 Score=93.28 Aligned_cols=84 Identities=17% Similarity=0.165 Sum_probs=51.6
Q ss_pred eeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg 400 (771)
..++|||++|+...... ..|.|. ....|.++|+.+.+... .+.... ....+.|+|||
T Consensus 324 va~s~dg~rlyVa~~~~--~~gthk~~s~~VsVID~~T~kvv~----------~I~vg~----------~P~gia~spDg 381 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQR--DEWKHKAASRFVVVLNAETGERIN----------KIELGH----------EIDSINVSQDA 381 (426)
T ss_dssp EEEEGGGTEEEEEEEEC--CTTCTTSCEEEEEEEETTTCCEEE----------EEEEEE----------EECEEEECCSS
T ss_pred eEEcCCCCEEEEEeccc--ccccccCCCCEEEEEECCCCeEEE----------EEECCC----------CcCeEEEccCC
Confidence 58999999876654321 012221 23579999998876421 111100 13467899999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004141 401 CTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
+.++|..++ ....|..||+.++++..-
T Consensus 382 ~~~lyv~n~-~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 382 EPLLYALSA-GTQTLHIYDAATGEELRS 408 (426)
T ss_dssp SCEEEEEET-TTTEEEEEETTTCCEEEE
T ss_pred CEEEEEEcC-CCCeEEEEECCCCCEEEE
Confidence 944455543 245688899999987744
No 415
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.73 E-value=5.4e-07 Score=100.30 Aligned_cols=240 Identities=9% Similarity=-0.012 Sum_probs=141.6
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004141 103 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
.+.|+.|...++|+.+.. ...+.+++ ..++....+......| ++.+||||++|+... .
T Consensus 158 ~~~~~~d~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~p~----------~v~~SpDGr~lyv~~-~-------- 216 (567)
T 1qks_A 158 QQMNDWDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYAVH----------ISRLSASGRYLFVIG-R-------- 216 (567)
T ss_dssp SCCSCCCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSSCEE----------EEEECTTSCEEEEEE-T--------
T ss_pred ccccccCCCceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCCcc----------ceEECCCCCEEEEEc-C--------
Confidence 466788877777887753 44677777 5555555555544443 889999999876542 1
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc--CCceeeccCCCCCCccceEEEe----cCCCCCc
Q 004141 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--SGEVQAVKGIPKSLSVGQVVWA----PLNEGLH 255 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~~~~~~l~~~~~~~~~~~~~ws----pDg~~~~ 255 (771)
...|.++|+. ++++..- ++.......+++| |||++
T Consensus 217 -----------------------------------dg~V~viD~~~~t~~~v~~--i~~G~~P~~ia~s~~~~pDGk~-- 257 (567)
T 1qks_A 217 -----------------------------------DGKVNMIDLWMKEPTTVAE--IKIGSEARSIETSKMEGWEDKY-- 257 (567)
T ss_dssp -----------------------------------TSEEEEEETTSSSCCEEEE--EECCSEEEEEEECCSTTCTTTE--
T ss_pred -----------------------------------CCeEEEEECCCCCCcEeEE--EecCCCCceeEEccccCCCCCE--
Confidence 2479999995 5554332 2333456788999 79996
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee-cCCC-----------Ccccccee
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTES-----------ISSAFFPR 323 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-lt~~-----------~~~~~~p~ 323 (771)
++... .. ...+.++|. .+.+... +... ...+....
T Consensus 258 --l~v~n-~~-------------~~~v~ViD~-----------------~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 258 --AIAGA-YW-------------PPQYVIMDG-----------------ETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp --EEEEE-EE-------------TTEEEEEET-----------------TTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred --EEEEE-cc-------------CCeEEEEEC-----------------CCCcEEEEEeccccccccccccCCCceEEEE
Confidence 55544 21 236778886 4444322 2111 11244567
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l 403 (771)
.|+++..+++...+ ..+|+++|..+.+...+ .. +. .+.| +....|+|||+++
T Consensus 305 ~s~~~~~~vv~~~~----------~g~v~~vd~~~~~~~~v-------~~-i~---~~~~-------~~d~~~~pdgr~~ 356 (567)
T 1qks_A 305 ASHYRPEFIVNVKE----------TGKILLVDYTDLNNLKT-------TE-IS---AERF-------LHDGGLDGSHRYF 356 (567)
T ss_dssp ECSSSSEEEEEETT----------TTEEEEEETTCSSEEEE-------EE-EE---CCSS-------EEEEEECTTSCEE
T ss_pred EcCCCCEEEEEecC----------CCeEEEEecCCCcccee-------ee-ee---cccc-------ccCceECCCCCEE
Confidence 78998876655533 25799999765432111 11 00 1122 1245799999988
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecCC-CC-Cc--eee-EEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004141 404 LLSSIWGSSQVIISVNVSSGELLRITPA-ES-NF--SWS-LLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~-~~--~~~-~~s~dg~~l~~~~~~~~~p~~l~~~~~~~ 467 (771)
+.+... ...|..+|.+++++...... .. .. ... .+.++++.++++..-. ...+.+++..+
T Consensus 357 ~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~ 421 (567)
T 1qks_A 357 ITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDP 421 (567)
T ss_dssp EEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCC
Confidence 776543 34577799999987755433 11 11 122 2467777776655422 23477776544
No 416
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.73 E-value=7.5e-09 Score=110.93 Aligned_cols=112 Identities=12% Similarity=0.058 Sum_probs=76.5
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHH-HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~l-a~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||...+. ...|.. .+..| +..+|.|+++|++|. |.+...... .......+++.+.++++.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~---g~s~y~~~~-~~~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSG---SRTAYSQAS-QNVRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHH---HSSCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcc---cCCccHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999966542 234654 44554 567999999999983 322110000 0000113456667777764433
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.+++.|+||||||.+|..++.++|++++++++..|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 567899999999999999999999999999999887754
No 417
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.72 E-value=6.9e-09 Score=110.44 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=80.1
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCc---EEEEECCCCCCCCChhh-------------hh------------
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEA-------------LQ------------ 586 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~Vv~~d~rG~~~~g~~~-------------~~------------ 586 (771)
...|.||++||.+.+ ...|...+..|+++|| .|+++|++| +|.+. ..
T Consensus 20 ~~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG---~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~ 94 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDT---ISWALVVETDMLFSGLGSEFGLNISQIIDPET 94 (484)
T ss_dssp -CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCH---HHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHH
T ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCC---CCcccccccccccccccccccccccccccccc
Confidence 345779999997665 4578888999999999 799999998 44320 00
Q ss_pred ---cCCC---CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCC---CceeEEEecCCccc
Q 004141 587 ---SLPG---KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 652 (771)
Q Consensus 587 ---~~~~---~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~~~v~~~p~~~ 652 (771)
.... .......+++.+.++.++++. +.+++.|+||||||.+++.++.++| +.++++|+.+|..+
T Consensus 95 l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 95 LDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0000 001123567777777777653 3478999999999999999999987 48999999988653
No 418
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.7e-07 Score=109.56 Aligned_cols=202 Identities=12% Similarity=0.053 Sum_probs=126.5
Q ss_pred cceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC
Q 004141 156 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 235 (771)
Q Consensus 156 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~ 235 (771)
.+++|||||+.||..+. +..|++|+..+++....
T Consensus 21 ~~lafspdg~~lAsgs~--------------------------------------------Dg~I~lw~~~~~~~~~~-- 54 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATV--------------------------------------------TGEVHIYGQQQVEVVIK-- 54 (902)
T ss_dssp EEEEEETTTTEEEEEET--------------------------------------------TSEEEEECSTTCEEEEE--
T ss_pred EEEEECCCCCEEEEEeC--------------------------------------------CCEEEEEeCCCcEEEEE--
Confidence 69999999999988643 25788999887776555
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC
Q 004141 236 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE 314 (771)
Q Consensus 236 ~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~ 314 (771)
......+..++|+| |+. |+..+ .+..|.++|+ .+++. ..+.
T Consensus 55 ~~~~~~V~~l~fsp-g~~----L~S~s---------------~D~~v~lWd~-----------------~~~~~~~~~~- 96 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIY----LVVIN---------------AKDTVYVLSL-----------------YSQKVLTTVF- 96 (902)
T ss_dssp CSSCCCEEEEEEET-TTE----EEEEE---------------TTCEEEEEET-----------------TTCSEEEEEE-
T ss_pred cCCCCCEEEEEEcC-CCE----EEEEE---------------CcCeEEEEEC-----------------CCCcEEEEEc-
Confidence 44555788999999 776 77665 2347888898 55543 3333
Q ss_pred CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCC
Q 004141 315 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 394 (771)
Q Consensus 315 ~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~ 394 (771)
....+....|+|||++|+..+.+. .|.+||+.++..... .++.+.... ..+. .+...+..+
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg-----------~V~lwd~~~~~~~~~------~i~~~~~~~-~~~~-~h~~~V~sl 157 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNG-----------SMIVYDIDRDQLSSF------KLDNLQKSS-FFPA-ARLSPIVSI 157 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTS-----------CEEEEETTTTEEEEE------EECCHHHHH-TCSS-SCCCCCCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCccccc------eeccccccc-cccc-cCCCCeEEE
Confidence 445688999999999988776543 488999887553100 000000000 0000 011246688
Q ss_pred ccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------------CCceeeEEeecCCEEEEEEeCCC
Q 004141 395 PWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------------SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 395 ~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------------~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
+|+|++..++++...++. + .+|+.+++..+..... ..+....|+|+|+.|+....+.
T Consensus 158 ~~sp~~~~~l~~g~~dg~--v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg- 233 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVT--L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN- 233 (902)
T ss_dssp EEETTEEEEEEEECSSCE--E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-
T ss_pred EEccCCCCEEEEEeCCCc--E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-
Confidence 999976555566555554 4 5588888755433221 2355678999998776655432
Q ss_pred CCCeEEEEEecc
Q 004141 456 DVPQVKYGYFVD 467 (771)
Q Consensus 456 ~p~~l~~~~~~~ 467 (771)
.+.+.++.+
T Consensus 234 ---~i~lWd~~~ 242 (902)
T 2oaj_A 234 ---SLVFWDANS 242 (902)
T ss_dssp ---CEEEEETTT
T ss_pred ---eEEEEECCC
Confidence 355555443
No 419
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.70 E-value=2.2e-06 Score=89.10 Aligned_cols=236 Identities=7% Similarity=-0.025 Sum_probs=126.3
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCccccccc
Q 004141 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVY 150 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 150 (771)
..|+.++. .+++.+++.... .......+++|||+.++...........++.++ .++....+.... ..
T Consensus 66 ~~i~~~d~--~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~----- 133 (333)
T 2dg1_A 66 GNIFKINP--ETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-ST----- 133 (333)
T ss_dssp CEEEEECT--TTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SS-----
T ss_pred CEEEEEeC--CCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-cc-----
Confidence 46777654 333444433211 134678899999975544322211224677777 444444333211 10
Q ss_pred CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce
Q 004141 151 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV 230 (771)
Q Consensus 151 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~ 230 (771)
......+.++|||+ |++....... ......||++|.++++.
T Consensus 134 -~~~~~~i~~d~~g~-l~v~~~~~~~-------------------------------------~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 134 -AYCIDDMVFDSKGG-FYFTDFRGYS-------------------------------------TNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp -CCCEEEEEECTTSC-EEEEECCCBT-------------------------------------TBCCEEEEEECTTSCCE
T ss_pred -CCcccceEECCCCC-EEEEeccccc-------------------------------------cCCCceEEEEeCCCCEE
Confidence 11235789999996 4443221100 01236799999888877
Q ss_pred eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-c
Q 004141 231 QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-V 309 (771)
Q Consensus 231 ~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~ 309 (771)
+.+ .........++|+|||+. |++... ....|+++++. ..+. .
T Consensus 175 ~~~--~~~~~~~~~i~~~~dg~~----l~v~~~--------------~~~~i~~~d~~----------------~~g~~~ 218 (333)
T 2dg1_A 175 TPI--IQNISVANGIALSTDEKV----LWVTET--------------TANRLHRIALE----------------DDGVTI 218 (333)
T ss_dssp EEE--EEEESSEEEEEECTTSSE----EEEEEG--------------GGTEEEEEEEC----------------TTSSSE
T ss_pred EEe--ecCCCcccceEECCCCCE----EEEEeC--------------CCCeEEEEEec----------------CCCcCc
Confidence 766 222234567899999997 766541 12368888872 1122 1
Q ss_pred eec-----C--CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC--
Q 004141 310 VNL-----T--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG-- 380 (771)
Q Consensus 310 ~~l-----t--~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-- 380 (771)
..+ . ..........+++||+ |+..... ...|+++|.++..... +..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~----------~~~v~~~d~~g~~~~~-----------~~~~~~~~ 276 (333)
T 2dg1_A 219 QPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYG----------QGRVLVFNKRGYPIGQ-----------ILIPGRDE 276 (333)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEET----------TTEEEEECTTSCEEEE-----------EECTTGGG
T ss_pred ccccceEEEecCCCCCCCceEECCCCC-EEEEEcC----------CCEEEEECCCCCEEEE-----------EEcCCCcc
Confidence 111 0 1113456688999998 3333222 1358888864321111 100000
Q ss_pred CCCcccccCCCCCCccccCCCEEEEEeeeC---CeeEEEEEECC
Q 004141 381 DCFPGLYSSSILSNPWLSDGCTMLLSSIWG---SSQVIISVNVS 421 (771)
Q Consensus 381 ~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~---~~~~l~~~d~~ 421 (771)
+.+ ..+..++|++|++.|++++..+ ....||++++.
T Consensus 277 g~~-----~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 277 GHM-----LRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TCS-----CBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ccc-----cCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 000 0245678999998888877643 34578888864
No 420
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.69 E-value=6.4e-06 Score=82.61 Aligned_cols=204 Identities=10% Similarity=0.122 Sum_probs=123.4
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
....++|+|++++|+++.. ....++.+. +++....+.... ... .+++++|++..|++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~~~~p----------~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGGEPTTIIRQDLGSP----------EGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEET---TTTEEEEEESSSCCCEEEECTTCCCE----------EEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEEC---CCCEEEEEecCCCCcEEEEECCCCCc----------cEEEEEecCCeEEEEEC-----
Confidence 3567899999998866543 234677777 444333333221 122 48899999887776522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCcc
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~ 256 (771)
....|+++++++...+.+ .... .....++++|++..
T Consensus 99 --------------------------------------~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~--- 135 (267)
T 1npe_A 99 --------------------------------------QLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGN--- 135 (267)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTE---
T ss_pred --------------------------------------CCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCE---
Confidence 235788999887665555 2222 35678899998876
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+++.+.. ....|+++++ ++...+.+. .........+++|||++|++..
T Consensus 136 -lyv~~~~~------------~~~~I~~~~~-----------------dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 136 -LYWTDWNR------------DNPKIETSHM-----------------DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -EEEEECCS------------SSCEEEEEET-----------------TSCCCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEECCC------------CCcEEEEEec-----------------CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 76654210 1247888887 444333332 2333467789999999998877
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
... ..|+++|.++..... +.. ....| . ....|+..||++.. +...|
T Consensus 186 ~~~----------~~I~~~~~~g~~~~~-------~~~------~~~~P-------~--gi~~d~~~lyva~~--~~~~v 231 (267)
T 1npe_A 186 AGT----------HRAECLNPAQPGRRK-------VLE------GLQYP-------F--AVTSYGKNLYYTDW--KTNSV 231 (267)
T ss_dssp TTT----------TEEEEEETTEEEEEE-------EEE------CCCSE-------E--EEEEETTEEEEEET--TTTEE
T ss_pred CCC----------CEEEEEecCCCceEE-------Eec------CCCCc-------e--EEEEeCCEEEEEEC--CCCeE
Confidence 542 469999986532211 110 01111 1 22456777877543 33468
Q ss_pred EEEECCCCcEEEe
Q 004141 416 ISVNVSSGELLRI 428 (771)
Q Consensus 416 ~~~d~~tg~~~~l 428 (771)
+++|.++|+....
T Consensus 232 ~~~d~~~g~~~~~ 244 (267)
T 1npe_A 232 IAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEeCCCCCceEE
Confidence 9999988875543
No 421
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.69 E-value=9.4e-09 Score=110.22 Aligned_cols=111 Identities=11% Similarity=0.094 Sum_probs=74.4
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||...+. ...|.. ....|.+ .+|.|+++|++|. |.+...... .......+++.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~---g~s~y~~~~-~~~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKG---SQTSYTQAA-NNVRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHH---HSSCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccc---cCCcchHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 4569999999976543 224554 3445544 5899999999983 221100000 0001123566666777754333
Q ss_pred CCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.+++.|+||||||.+|..++.++|+ ++.+++..|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 567899999999999999999999999 99999887754
No 422
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.68 E-value=1.9e-06 Score=90.03 Aligned_cols=257 Identities=13% Similarity=0.033 Sum_probs=135.6
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 103 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+.+||||+++++.... +.....+..++ ..++..+.+.++.... .-....-.++.+||||++|+......
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~--~~~g~~P~~ia~SpDGk~lyVan~~~- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR--FSVGPRVHIIGNCASSACLLFFLFGS- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS--CCBSCCTTSEEECTTSSCEEEEECSS-
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc--cccCCCcceEEEcCCCCEEEEEccCC-
Confidence 79999999998654311 11223466666 5555555555541100 00000114899999999876653221
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEE--EEccCCceeeccCCCCCCccceEEEecCCCC
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV--ININSGEVQAVKGIPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v--~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~ 253 (771)
...+.+ +|+.+ +..+. .+.. +...|+|+.
T Consensus 146 -----------------------------------------~~~v~V~~iD~~t--v~~i~-v~~~-----~~~~p~g~~ 176 (368)
T 1mda_H 146 -----------------------------------------SAAAGLSVPGASD--DQLTK-SASC-----FHIHPGAAA 176 (368)
T ss_dssp -----------------------------------------SCEEEEEETTTEE--EEEEE-CSSC-----CCCEEEETT
T ss_pred -----------------------------------------CCeEEEEEEchhh--ceEEE-CCCc-----eEEccCCCe
Confidence 245666 78776 44442 2221 234678887
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-----Cccee-cCCCCccccceeecCC
Q 004141 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-----LPVVN-LTESISSAFFPRFSPD 327 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~-lt~~~~~~~~p~~SpD 327 (771)
.++... ....+..+++ ++ ++... .+........|..+++
T Consensus 177 ----~~~~~~--------------~dg~~~~vd~-----------------~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 177 ----THYLGS--------------CPASLAASDL-----------------AAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp ----EEECCC--------------CTTSCEEEEC-----------------CSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred ----EEEEEc--------------CCCCEEEEEC-----------------ccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 655431 2235566776 32 22211 0000000122323889
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCC-CCcccccCCCCCCccccCCCEEEEE
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD-CFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~g~~~~~~~~~~~s~Dg~~l~~~ 406 (771)
++.++|.+. . .++++|+.++.... ...+...... .-.+..........+++||+++|++
T Consensus 222 ~~~~~~vs~-~-----------~V~viD~~~~~~~v--------~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 222 PGMLVWAVA-S-----------SILQGDIPAAGATM--------KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp TTEEEECBS-S-----------CCEEEECCSSCCEE--------ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred CCEEEEEcC-C-----------EEEEEECCCCcceE--------EEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 999999886 3 38889986543211 1111000000 0000000112235799999999877
Q ss_pred eeeC-C-----eeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 407 SIWG-S-----SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 407 ~~~~-~-----~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.... + ...+..||++++++..-...........+++||+.++++.... .-.+.++|+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~--~~~VsVID~~t~ 347 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAG--TEVLDIYDAASD 347 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEESSSC
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCC--CCeEEEEECCCC
Confidence 5522 2 2345589999987654332222244568899999888777621 355888887544
No 423
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.64 E-value=1.2e-06 Score=90.93 Aligned_cols=189 Identities=13% Similarity=-0.024 Sum_probs=106.1
Q ss_pred ceEEEEEccCCceeeccCCCCC----CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004141 218 PSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~----~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+++|+.++++......... ..+..+++ ++++ |+...+. ....|+++|+
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~----lyv~~~~-------------~~~~v~viD~------ 159 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKY----VYVNCWS-------------YQNRILKIDT------ 159 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTE----EEEEECT-------------TCCEEEEEET------
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCE----EEEEcCC-------------CCCEEEEEEC------
Confidence 6899999999887543101110 14456666 5554 5554321 1237999998
Q ss_pred hhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEe
Q 004141 294 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 373 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 373 (771)
++++...............++|||+ |++.................|+++|..+++.. .
T Consensus 160 -----------~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~----------~ 217 (328)
T 3dsm_A 160 -----------ETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE----------K 217 (328)
T ss_dssp -----------TTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE----------E
T ss_pred -----------CCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEE----------E
Confidence 6555433222233456788999998 55555432100000001257999998776531 1
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec--CC-CCCceeeEEeecCCEEEEE
Q 004141 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT--PA-ESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~--~~-~~~~~~~~~s~dg~~l~~~ 450 (771)
.+..+. + .....++++||+++||++.. .++.+|.+++++.... .. ........++|+++.|+++
T Consensus 218 ~~~~~~-g-------~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 218 QFKFKL-G-------DWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp EEECCT-T-------CCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred EEecCC-C-------CCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 111100 0 12356789999998877642 7899999988864211 11 1223445678777777766
Q ss_pred E-eCCCCCCeEEEEEec
Q 004141 451 S-SSPVDVPQVKYGYFV 466 (771)
Q Consensus 451 ~-~~~~~p~~l~~~~~~ 466 (771)
. .+......|++++..
T Consensus 285 ~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 285 DAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ECTTSSSEEEEEEECTT
T ss_pred cccccccCCEEEEECCC
Confidence 4 222345667777754
No 424
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.63 E-value=1.1e-06 Score=96.00 Aligned_cols=273 Identities=8% Similarity=-0.004 Sum_probs=149.1
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004141 105 VPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
.+++++++|+..+..+ .+.+|+....+.+..+. +..+. +..+.|+|++ .|+..+.+...+ .|+..
T Consensus 127 ~~~~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~-~h~~~------V~~l~~~~~~-~l~s~s~dg~i~--vwd~~ 191 (464)
T 3v7d_B 127 CLQFEDNYVITGADDK-----MIRVYDSINKKFLLQLS-GHDGG------VWALKYAHGG-ILVSGSTDRTVR--VWDIK 191 (464)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC-CCSSC------EEEEEECSTT-EEEEEETTSCEE--EEETT
T ss_pred EEEECCCEEEEEcCCC-----cEEEEECCCCcEEEEEe-CCCcC------EEEEEEcCCC-EEEEEeCCCCEE--EEECC
Confidence 4556788887765543 45566322222222221 11122 2689999999 677666655432 33322
Q ss_pred CCCCCCCCccCCCCCCccccc--CCcCcccCCccCceEEEEEccCCceeeccCCC--------------------CCCcc
Q 004141 185 STKGGSSDKDCNSWKGQGDWE--EDWGETYAGKRQPSLFVININSGEVQAVKGIP--------------------KSLSV 242 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~--~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~--------------------~~~~~ 242 (771)
..........+........+. ++....+++.....|.+||+.++......... .....
T Consensus 192 ~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 192 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 221111111222222333344 34344556667789999999877533210000 00011
Q ss_pred ceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccc
Q 004141 243 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFF 321 (771)
Q Consensus 243 ~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~ 321 (771)
.-..++++++. |+..+ .+..|.++|+ .+++ ...+..+...+..
T Consensus 272 ~v~~~~~~~~~----l~~~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 272 SVRTVSGHGNI----VVSGS---------------YDNTLIVWDV-----------------AQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp CEEEEEEETTE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEE
T ss_pred eEEEEcCCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCEEE
Confidence 12345788876 66554 3347888898 4444 4556666777899
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~ 401 (771)
..|+|||+.|+..+.+. .|.+||+.+++........ ...+..+.|+ ++
T Consensus 316 ~~~~~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~h-------------------~~~v~~~~~~--~~ 363 (464)
T 3v7d_B 316 TIYDHERKRCISASMDT-----------TIRIWDLENGELMYTLQGH-------------------TALVGLLRLS--DK 363 (464)
T ss_dssp EEEETTTTEEEEEETTS-----------CEEEEETTTTEEEEEECCC-------------------SSCEEEEEEC--SS
T ss_pred EEEcCCCCEEEEEeCCC-----------cEEEEECCCCcEEEEEeCC-------------------CCcEEEEEEc--CC
Confidence 99999999988766553 4889998876532111100 0123344565 45
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 402 TMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.| ++...++. |..+|+.+++...............++++++.++... + ..+.+.++.++
T Consensus 364 ~l-~s~s~dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d----g~i~iwd~~~g 422 (464)
T 3v7d_B 364 FL-VSAAADGS--IRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E----NQFNIYNLRSG 422 (464)
T ss_dssp EE-EEEETTSE--EEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T----TEEEEEETTTC
T ss_pred EE-EEEeCCCc--EEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C----CeEEEEECCCC
Confidence 44 55555555 4445777776554443333445568899998666543 2 36777777654
No 425
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.9e-06 Score=88.63 Aligned_cols=155 Identities=11% Similarity=0.031 Sum_probs=96.4
Q ss_pred cceEEEeCC--CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004141 100 GASAVVPSP--SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 100 ~~~~~~~SP--dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+...+|+| +|++++..+..+ .+.+| ..++..++...... ..+.+++|+|||+.|+..+.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~--------~~i~~~~~~pdg~~lasg~~--- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSD--------VEYSSGVLHKDSLLLALYSP--- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSS--------CCCCEEEECTTSCEEEEECT---
T ss_pred CEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCC--------CceEEEEECCCCCEEEEEcC---
Confidence 477899999 999998776543 34555 23333333222111 11368999999998887532
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee--eccCCCCCCccceEEEecCCCC
Q 004141 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~--~l~~~~~~~~~~~~~wspDg~~ 253 (771)
...|.+||+.+++.. .+. ......+..+.|+|||+.
T Consensus 191 -----------------------------------------dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 191 -----------------------------------------DGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp -----------------------------------------TSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSE
T ss_pred -----------------------------------------CCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCE
Confidence 367999999988764 442 114567889999999997
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC---CCcccc--ceeecCC
Q 004141 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE---SISSAF--FPRFSPD 327 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~---~~~~~~--~p~~SpD 327 (771)
|+..+ .. .|.++|+ ..++. ..+.. +..... ...|+||
T Consensus 229 ----l~s~~---------------~~-~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 229 ----MVVEC---------------DQ-TVVCFDL-----------------RKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp ----EEEEE---------------SS-BEEEEET-----------------TSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred ----EEEEe---------------CC-eEEEEEc-----------------CCCCcceeecccccccccccceEEEECCC
Confidence 77665 11 6888887 33332 22221 222222 4999999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
|++|+..+..+ ..+.+|++..+
T Consensus 272 g~~l~~~s~~d----------~~i~v~~~~~~ 293 (343)
T 3lrv_A 272 GKNMIAYSNES----------NSLTIYKFDKK 293 (343)
T ss_dssp SSEEEEEETTT----------TEEEEEEECTT
T ss_pred CCEEEEecCCC----------CcEEEEEEccc
Confidence 99998766522 24667776543
No 426
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=3.9e-06 Score=84.18 Aligned_cols=179 Identities=8% Similarity=-0.047 Sum_probs=109.1
Q ss_pred ceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|++++++++..+.+ .... ..+..++++|+++. |+++.. ....|+++++
T Consensus 58 ~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~----lyv~d~--------------~~~~I~~~~~--------- 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRT----IFWTDS--------------QLDRIEVAKM--------- 108 (267)
T ss_dssp TEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCe----EEEEEC--------------CCCEEEEEEc---------
Confidence 6899999988776555 2322 35678899998876 666541 2237899997
Q ss_pred hhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 297 LELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.+.. ........+++|++..|++..... ....|+++++++...+.+ ..
T Consensus 109 --------~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~--------~~~~I~~~~~dg~~~~~~-------~~-- 163 (267)
T 1npe_A 109 --------DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR--------DNPKIETSHMDGTNRRIL-------AQ-- 163 (267)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS--------SSCEEEEEETTSCCCEEE-------EC--
T ss_pred --------CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC--------CCcEEEEEecCCCCcEEE-------EE--
Confidence 4444333332 223456789999988888876431 124688888765332111 00
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
. ... ....+++++|++.||++.. +...|++++++++..+.+..... .-..++.+++.|+++...
T Consensus 164 -~--~~~-------~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~--~P~gi~~d~~~lyva~~~-- 227 (267)
T 1npe_A 164 -D--NLG-------LPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQ--YPFAVTSYGKNLYYTDWK-- 227 (267)
T ss_dssp -T--TCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCC--SEEEEEEETTEEEEEETT--
T ss_pred -C--CCC-------CCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCC--CceEEEEeCCEEEEEECC--
Confidence 0 001 2346789999988887754 33578889997766555543222 112456678888776543
Q ss_pred CCCeEEEEEecc
Q 004141 456 DVPQVKYGYFVD 467 (771)
Q Consensus 456 ~p~~l~~~~~~~ 467 (771)
..+|++++..+
T Consensus 228 -~~~v~~~d~~~ 238 (267)
T 1npe_A 228 -TNSVIAMDLAI 238 (267)
T ss_dssp -TTEEEEEETTT
T ss_pred -CCeEEEEeCCC
Confidence 24577776543
No 427
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.62 E-value=1.3e-06 Score=89.57 Aligned_cols=252 Identities=7% Similarity=-0.091 Sum_probs=132.3
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
-|.+++||+.|.++... ...|+.++. . ++...+.... ......+++|||+.++. .. +...
T Consensus 49 gp~~~~~g~~l~~~d~~--------~~~i~~~~~--~-g~~~~~~~~~-----~~~~gl~~d~dG~l~v~-~~---~~~~ 108 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLV--------GRRVLGWRE--D-GTVDVLLDAT-----AFTNGNAVDAQQRLVHC-EH---GRRA 108 (305)
T ss_dssp EEEEEGGGTEEEEEETT--------TTEEEEEET--T-SCEEEEEESC-----SCEEEEEECTTSCEEEE-ET---TTTE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEeC--C-CCEEEEeCCC-----CccceeeECCCCCEEEE-EC---CCCE
Confidence 34556788888876432 235666543 2 2333333222 34677899999984433 22 2235
Q ss_pred EEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004141 126 QFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
++.+...+..+.+........ ......+.++|||+ |++. +........ +.
T Consensus 109 v~~~~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~dG~-l~~t-d~~~g~~~~-----------------------~~ 158 (305)
T 3dr2_A 109 ITRSDADGQAHLLVGRYAGKR-----LNSPNDLIVARDGA-IWFT-DPPFGLRKP-----------------------SQ 158 (305)
T ss_dssp EEEECTTSCEEEEECEETTEE-----CSCCCCEEECTTSC-EEEE-CCSGGGSCG-----------------------GG
T ss_pred EEEECCCCCEEEEEeccCCCc-----cCCCCCEEECCCCC-EEEe-CcCCCcccc-----------------------cc
Confidence 666664455444433211110 01124789999997 5443 110000000 00
Q ss_pred CCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 206 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
.... ........||++|.++++.+.+ . .......++|+|||+. |++...... .+....|+++
T Consensus 159 ~~~~--~~~~~~~~v~~~d~~~g~~~~~--~-~~~~p~gl~~spdg~~----lyv~~~~~~---------~~~~~~i~~~ 220 (305)
T 3dr2_A 159 GCPA--DPELAHHSVYRLPPDGSPLQRM--A-DLDHPNGLAFSPDEQT----LYVSQTPEQ---------GHGSVEITAF 220 (305)
T ss_dssp SCCC--CCSSSCEEEEEECSSSCCCEEE--E-EESSEEEEEECTTSSE----EEEEECCC------------CCCEEEEE
T ss_pred cccc--ccccCCCeEEEEcCCCCcEEEE--e-cCCCCcceEEcCCCCE----EEEEecCCc---------CCCCCEEEEE
Confidence 0000 0011236899999988888877 4 3334567899999997 766542110 0012478888
Q ss_pred ecccccchhhhhhhhcCCCCCCcc---eec-CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 286 RVSLYKSEASELELKESSSEDLPV---VNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~---~~l-t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
++ .++.. +.+ ....+......+++||+ | |++... .|++++.++...
T Consensus 221 ~~-----------------~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-l-wv~~~~-----------gv~~~~~~g~~~ 270 (305)
T 3dr2_A 221 AW-----------------RDGALHDRRHFASVPDGLPDGFCVDRGGW-L-WSSSGT-----------GVCVFDSDGQLL 270 (305)
T ss_dssp EE-----------------ETTEEEEEEEEECCSSSCCCSEEECTTSC-E-EECCSS-----------EEEEECTTSCEE
T ss_pred Ee-----------------cCCCccCCeEEEECCCCCCCeEEECCCCC-E-EEecCC-----------cEEEECCCCCEE
Confidence 87 22211 111 11233455678899998 4 444321 388888643211
Q ss_pred CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004141 362 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
..+ ..+ ..+..++|++|++.|++++. ..||++++
T Consensus 271 ~~~-----------~~~----------~~~~~~~f~~d~~~L~it~~----~~l~~~~~ 304 (305)
T 3dr2_A 271 GHI-----------PTP----------GTASNCTFDQAQQRLFITGG----PCLWMLPL 304 (305)
T ss_dssp EEE-----------ECS----------SCCCEEEECTTSCEEEEEET----TEEEEEEC
T ss_pred EEE-----------ECC----------CceeEEEEeCCCCEEEEEcC----CeEEEEEC
Confidence 111 010 02456788999998887764 26887764
No 428
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.62 E-value=4.4e-08 Score=99.56 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=65.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..|.||++||.+++ ...|...+..|. +.|+++|+++... ...++++.+.+..++... ..
T Consensus 22 ~~~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~~-~~ 81 (283)
T 3tjm_A 22 SSERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQV-QP 81 (283)
T ss_dssp SSSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTTT-CC
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHHh-CC
Confidence 345678999997765 446777777774 9999999965211 123445444443333331 12
Q ss_pred CCeEEEEEcChhHHHHHHHHhhC---CCcee---EEEecCCc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQA---PDKFV---AAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~---p~~~~---~~v~~~p~ 650 (771)
.+++.|+||||||.+++.++.+. |+.+. .+++.++.
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 36899999999999999998865 77787 88877764
No 429
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.58 E-value=2e-06 Score=89.19 Aligned_cols=233 Identities=10% Similarity=0.050 Sum_probs=126.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004141 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.|.+++|+..+.++... ...|+.++.. +++...+.. + .....++|+|||+.++.. . ..
T Consensus 53 gp~~~~~~~~l~~~d~~--------~~~i~~~d~~--~~~~~~~~~-~-----~~v~~i~~~~dg~l~v~~-~-----~g 110 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL--------ERELHELHLA--SGRKTVHAL-P-----FMGSALAKISDSKQLIAS-D-----DG 110 (326)
T ss_dssp EEEEETTTTEEEEEEGG--------GTEEEEEETT--TTEEEEEEC-S-----SCEEEEEEEETTEEEEEE-T-----TE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEECC--CCcEEEEEC-C-----CcceEEEEeCCCeEEEEE-C-----CC
Confidence 34456677777765322 2467776643 223333321 1 346778899999876543 2 23
Q ss_pred EEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004141 126 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
++.++ .+++.+.+........ ...+..+.++|||+ |++.......
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~v~~~~~~~---------------------------- 156 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLP-----GNRSNDGRMHPSGA-LWIGTMGRKA---------------------------- 156 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCT-----TEEEEEEEECTTSC-EEEEEEETTC----------------------------
T ss_pred EEEEECCCCcEEEEeeCCCCCC-----CCCCCCEEECCCCC-EEEEeCCCcC----------------------------
Confidence 77777 5566555544321110 11235789999998 4443321100
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004141 205 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
......||+++ +++.+.+ .........++|+|||+. |++... ....|++
T Consensus 157 ---------~~~~~~l~~~~--~g~~~~~--~~~~~~~~~i~~s~dg~~----lyv~~~--------------~~~~I~~ 205 (326)
T 2ghs_A 157 ---------ETGAGSIYHVA--KGKVTKL--FADISIPNSICFSPDGTT----GYFVDT--------------KVNRLMR 205 (326)
T ss_dssp ---------CTTCEEEEEEE--TTEEEEE--EEEESSEEEEEECTTSCE----EEEEET--------------TTCEEEE
T ss_pred ---------CCCceEEEEEe--CCcEEEe--eCCCcccCCeEEcCCCCE----EEEEEC--------------CCCEEEE
Confidence 01236789998 5666665 222224567899999997 777641 2237899
Q ss_pred EecccccchhhhhhhhcCCCCCC-cc---e---ecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004141 285 VRVSLYKSEASELELKESSSEDL-PV---V---NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~-~~---~---~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
++++. .++ .. + .+...........+++||+ |+..... ...|+++|.+
T Consensus 206 ~d~~~---------------~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~----------~~~v~~~d~~ 259 (326)
T 2ghs_A 206 VPLDA---------------RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWG----------EGAVDRYDTD 259 (326)
T ss_dssp EEBCT---------------TTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEET----------TTEEEEECTT
T ss_pred EEccc---------------ccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeC----------CCEEEEECCC
Confidence 98720 133 21 1 1222234456678899997 3333322 1358888873
Q ss_pred CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCC
Q 004141 358 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 411 (771)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~Dg~~l~~~~~~~~ 411 (771)
++... .+..+. ..+..++|+ +|++.|++++...+
T Consensus 260 -g~~~~----------~i~~~~---------~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 260 -GNHIA----------RYEVPG---------KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -CCEEE----------EEECSC---------SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -CCEEE----------EEECCC---------CCcEEEEEecCCCCEEEEEecCCC
Confidence 32210 000000 113456787 89888888776543
No 430
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.58 E-value=7.1e-06 Score=85.08 Aligned_cols=150 Identities=9% Similarity=0.094 Sum_probs=89.8
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|.++|++++++... ++....+..+.++|||+ ++++++...... .+ ......|+++|.
T Consensus 152 ~~v~viD~~t~~~~~~--i~~g~~p~~i~~~~dG~-----l~v~~~~~~~~~---~~-~~~~~~v~~id~---------- 210 (328)
T 3dsm_A 152 NRILKIDTETDKVVDE--LTIGIQPTSLVMDKYNK-----MWTITDGGYEGS---PY-GYEAPSLYRIDA---------- 210 (328)
T ss_dssp CEEEEEETTTTEEEEE--EECSSCBCCCEECTTSE-----EEEEBCCBCTTC---SS-CBCCCEEEEEET----------
T ss_pred CEEEEEECCCCeEEEE--EEcCCCccceEEcCCCC-----EEEEECCCccCC---cc-ccCCceEEEEEC----------
Confidence 6899999999886554 23334566788999997 766663221000 00 001247999997
Q ss_pred hhhcCCCCCCcce-ecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 298 ELKESSSEDLPVV-NLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 298 ~~~~~~~~~~~~~-~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++++.. .+.-. .......+|||||++|++... .|+++|..+++...... .
T Consensus 211 -------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-------------~v~~~d~~t~~~~~~~~--------~ 262 (328)
T 3dsm_A 211 -------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-------------DIWRMPVEADRVPVRPF--------L 262 (328)
T ss_dssp -------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-------------SEEEEETTCSSCCSSCS--------B
T ss_pred -------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-------------EEEEEECCCCceeeeee--------e
Confidence 666543 33221 235678999999998876432 48999988766421100 0
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeee--CCeeEEEEEECCCCcEE
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQVIISVNVSSGELL 426 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~--~~~~~l~~~d~~tg~~~ 426 (771)
.. .. ..+..++++|++..|+++... .....|+++|.+ |++.
T Consensus 263 ~~--~~-------~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 263 EF--RD-------TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CC--CS-------SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred cC--CC-------CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 00 00 123456789877778776421 245678888987 5543
No 431
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.56 E-value=7.4e-06 Score=86.03 Aligned_cols=87 Identities=18% Similarity=0.087 Sum_probs=50.4
Q ss_pred cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC---------CCCccccc
Q 004141 318 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG---------DCFPGLYS 388 (771)
Q Consensus 318 ~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---------~~f~g~~~ 388 (771)
......+|||||+| |++++. ...|.++|+.......+ +..+..... ....
T Consensus 322 ~pa~I~lS~DGrfL-YVSnrg---------~d~VavfdV~d~~~~~l-------v~~I~tGG~~~~~~~~~G~~~~---- 380 (462)
T 2ece_A 322 LVTDIDISLDDKFL-YLSLWG---------IGEVRQYDISNPFKPVL-------TGKVKLGGIFHRADHPAGHKLT---- 380 (462)
T ss_dssp CCCCEEECTTSCEE-EEEETT---------TTEEEEEECSSTTSCEE-------EEEEECBTTTTCBCCTTSCCCC----
T ss_pred ceeEEEECCCCCEE-EEEeCC---------CCEEEEEEecCCCCcEE-------EEEEEeCCeeccccccccccCC----
Confidence 46778999999976 566653 35688888753322111 111111100 1111
Q ss_pred CCCCCCccccCCCEEEEEee-----------eCCeeEEEEE--ECCCCcEE
Q 004141 389 SSILSNPWLSDGCTMLLSSI-----------WGSSQVIISV--NVSSGELL 426 (771)
Q Consensus 389 ~~~~~~~~s~Dg~~l~~~~~-----------~~~~~~l~~~--d~~tg~~~ 426 (771)
.....+.+||||++||++.+ ......++.+ |.++| ++
T Consensus 381 ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp SCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred CCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 13467889999999988872 2334567755 66667 55
No 432
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.55 E-value=8.3e-06 Score=87.29 Aligned_cols=220 Identities=10% Similarity=-0.005 Sum_probs=122.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|+|+|+ | |+.+. ....++.++ .++....+.... .. ..++|+|||+.|+.....
T Consensus 131 ~~P~~la~d~~g~-l-yv~d~--~~~~I~~id~~~g~~~~~~~~~-~~----------~~ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-V-LAYQR--DDPRVRLISVDDNKVTTVHPGF-KG----------GKPAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CCEEEEEECSTTE-E-EEEET--TTTEEEEEETTTTEEEEEEETC-CB----------CBCEECTTSSEEEEEBSS----
T ss_pred CCceEEEEeCCCC-E-EEEec--CCCcEEEEECCCCEEEEeeccC-CC----------CceeEecCCCcEEEEecC----
Confidence 3466788999998 4 44443 234577776 445544443331 11 238999999977665321
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee-eccC-CC-CCCccceEEEecCCCCC
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKG-IP-KSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~-~l~~-~~-~~~~~~~~~wspDg~~~ 254 (771)
....|++++..++... .+.. .. ....+..++++|++..
T Consensus 192 --------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~- 232 (409)
T 3hrp_A 192 --------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW- 232 (409)
T ss_dssp --------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-
T ss_pred --------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-
Confidence 1137899998876542 2200 12 2335667899996665
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec----CCCC-ccc-c-ceeecCC
Q 004141 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TESI-SSA-F-FPRFSPD 327 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l----t~~~-~~~-~-~p~~SpD 327 (771)
|++.. ....|+++|+ +++....+ .... ... . ..+|+|+
T Consensus 233 ---lyv~d---------------~~~~I~~~d~-----------------~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 233 ---LYFVD---------------SNKNFGRFNV-----------------KTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp ---EEEEC---------------TTCEEEEEET-----------------TTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred ---EEEEE---------------CCCcEEEEEC-----------------CCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 77632 2237999997 55544433 2211 122 3 7899998
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc-cCCCCCcccccCCCCCCccccCCCEEEEE
Q 004141 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC-AEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~ 406 (771)
+..|++.... ...|++++.++. ...+. +.......... .....| ..+..+++++||+ ||++
T Consensus 278 ~g~lyv~d~~----------~~~I~~~~~~g~-~~~~~-g~~~~~g~~dg~~~~~~~-----~~P~gia~d~dG~-lyva 339 (409)
T 3hrp_A 278 DSNFYMSDQN----------LSSVYKITPDGE-CEWFC-GSATQKTVQDGLREEALF-----AQPNGMTVDEDGN-FYIV 339 (409)
T ss_dssp TTEEEEEETT----------TTEEEEECTTCC-EEEEE-ECTTCCSCBCEEGGGCBC-----SSEEEEEECTTCC-EEEE
T ss_pred CCEEEEEeCC----------CCEEEEEecCCC-EEEEE-eCCCCCCcCCCcccccEe-----CCCeEEEEeCCCC-EEEE
Confidence 7878776543 246888887643 11100 00000000000 000001 1234678999998 6655
Q ss_pred eeeCCeeEEEEEECCCCcEEEecC
Q 004141 407 SIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 407 ~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
.. .+...|+++++.+|++..+..
T Consensus 340 d~-~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 340 DG-FKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp ET-TTTCEEEEEETTTTEEEEEEE
T ss_pred eC-CCCCEEEEEECCCCEEEEEeC
Confidence 32 145678889977888877654
No 433
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.54 E-value=2.1e-07 Score=82.14 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004141 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++| +... .|... |+ .+|.|+++|+|| +|.+... . . . .+++.+.+..+++. ++.+
T Consensus 22 ~~~vv~~H-~~~~----~~~~~---l~-~~~~v~~~d~~G---~G~s~~~--~-~--~--~~~~~~~~~~~~~~--~~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EEAS----RWPEA---LP-EGYAFYLLDLPG---YGRTEGP--R-M--A--PEELAHFVAGFAVM--MNLG 80 (131)
T ss_dssp SSEEEEES-SSGG----GCCSC---CC-TTSEEEEECCTT---STTCCCC--C-C--C--HHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEEc-CCHH----HHHHH---Hh-CCcEEEEECCCC---CCCCCCC--C-C--C--HHHHHHHHHHHHHH--cCCC
Confidence 47899999 2221 22222 43 459999999999 4443211 1 1 1 55555555555554 2456
Q ss_pred eEEEEEcChhHHHHHHHHhhCCC
Q 004141 617 KVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
++.++|||+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
No 434
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.50 E-value=2.2e-06 Score=87.64 Aligned_cols=201 Identities=12% Similarity=0.048 Sum_probs=114.8
Q ss_pred cceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC
Q 004141 156 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 235 (771)
Q Consensus 156 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~ 235 (771)
.++.|+|++..|+++.. ....|+++|.++++.+.+.
T Consensus 16 Egp~w~~~~~~l~~~d~-------------------------------------------~~~~i~~~d~~~~~~~~~~- 51 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI-------------------------------------------PAKKVCRWDSFTKQVQRVT- 51 (297)
T ss_dssp EEEEEETTTTEEEEEET-------------------------------------------TTTEEEEEETTTCCEEEEE-
T ss_pred cCCeEECCCCEEEEEEC-------------------------------------------CCCEEEEEECCCCcEEEEe-
Confidence 58999999888888632 2368999999988776552
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC
Q 004141 236 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 315 (771)
Q Consensus 236 ~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 315 (771)
....+..++++|||+ |++.. ...|+++|+ ++++.+.+...
T Consensus 52 --~~~~~~~i~~~~dG~-----l~v~~----------------~~~l~~~d~-----------------~~g~~~~~~~~ 91 (297)
T 3g4e_A 52 --MDAPVSSVALRQSGG-----YVATI----------------GTKFCALNW-----------------KEQSAVVLATV 91 (297)
T ss_dssp --CSSCEEEEEEBTTSS-----EEEEE----------------TTEEEEEET-----------------TTTEEEEEEEC
T ss_pred --CCCceEEEEECCCCC-----EEEEE----------------CCeEEEEEC-----------------CCCcEEEEEec
Confidence 223577889999998 44432 126888987 66665554322
Q ss_pred -----CccccceeecCCCCEEEEEecCCCCCCC-CccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccC
Q 004141 316 -----ISSAFFPRFSPDGKFLVFLSAKSSVDSG-AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 389 (771)
Q Consensus 316 -----~~~~~~p~~SpDG~~l~f~~~~~~~~~g-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~ 389 (771)
.......+++|||+ |++.......... .......||+++..+ ....+.... .
T Consensus 92 ~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~-------------~------- 149 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQV-------------D------- 149 (297)
T ss_dssp CTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEE-------------S-------
T ss_pred CCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecc-------------c-------
Confidence 12356788999999 5565533210000 001234688887542 221111000 0
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE--E-ecC-C--CCCceeeEEeecCCEEEEEEeCCCCCCeEEEE
Q 004141 390 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL--R-ITP-A--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYG 463 (771)
Q Consensus 390 ~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~--~-l~~-~--~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~ 463 (771)
....++|+|||+.||++....+....|.++..+|++. + +.. . ........++++|+ |+++.... .+|+++
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~---~~v~~~ 225 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNG---GRVIRL 225 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETT---TEEEEE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCC---CEEEEE
Confidence 1236789999998888766544433443344677653 1 211 1 12223345666764 54444322 347766
Q ss_pred Eec
Q 004141 464 YFV 466 (771)
Q Consensus 464 ~~~ 466 (771)
+..
T Consensus 226 d~~ 228 (297)
T 3g4e_A 226 DPV 228 (297)
T ss_dssp CTT
T ss_pred cCC
Confidence 644
No 435
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.48 E-value=1.1e-05 Score=82.12 Aligned_cols=42 Identities=10% Similarity=-0.003 Sum_probs=29.0
Q ss_pred ceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCcccc-ceeecCCCCEEEEEecCC
Q 004141 280 CALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAF-FPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~-~p~~SpDG~~l~f~~~~~ 338 (771)
..|.++|+ .+++ ...|..+...+. ..+|||||++|+..+.+.
T Consensus 305 gTIkIWDl-----------------~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 305 GTIAIWDL-----------------LLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp SCEEEEET-----------------TTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred CcEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 47889998 6665 455665555444 589999999998777553
No 436
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.46 E-value=9.5e-06 Score=87.66 Aligned_cols=168 Identities=11% Similarity=0.110 Sum_probs=97.3
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC--------cceEEEecCCcccccccCCCcccceeecCC-CCeEE
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS--------QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIA 168 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD-g~~la 168 (771)
.+...+|||||++||...... .......+|+ .+ +.........+..+ .+..++|+|+ ++.|+
T Consensus 94 ~v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~------~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG------MVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG------SEEEEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCcCCcceeeeeeccCCCCC------ceEEEEECCCCCCEEE
Confidence 478899999999998632111 1122444552 11 11111222111111 2368999998 66666
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEe
Q 004141 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 248 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ws 248 (771)
..+. +..|.+||+.++...... ......+..++||
T Consensus 167 s~s~--------------------------------------------Dg~v~iwD~~~~~~~~~~-~~~~~~v~~v~ws 201 (434)
T 2oit_A 167 VCLA--------------------------------------------DGSIAVLQVTETVKVCAT-LPSTVAVTSVCWS 201 (434)
T ss_dssp EEET--------------------------------------------TSCEEEEEESSSEEEEEE-ECGGGCEEEEEEC
T ss_pred EEEC--------------------------------------------CCeEEEEEcCCCcceeec-cCCCCceeEEEEc
Confidence 6533 257899999887543221 2234467889999
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-------CCccccc
Q 004141 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-------SISSAFF 321 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-------~~~~~~~ 321 (771)
|||+. |+..+ .+..|.++|+ .+.....+.. +...+.+
T Consensus 202 pdg~~----lasgs---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 202 PKGKQ----LAVGK---------------QNGTVVQYLP-----------------TLQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TTSSC----EEEEE---------------TTSCEEEECT-----------------TCCEEEEECCCTTCCTTSCEEEEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEcc-----------------CCcccccccCCcccCCCCceeEEE
Confidence 99998 88765 2336888886 3222222221 1236788
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
..|++++..++..+..+ |.......+.++++...
T Consensus 246 v~w~~~~~~l~~~~~~d----g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAAD----GTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETT----CCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCC----CccCCCCceEEEEeccC
Confidence 99999998876555443 21112245777887654
No 437
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.46 E-value=1e-05 Score=82.32 Aligned_cols=231 Identities=10% Similarity=0.039 Sum_probs=111.4
Q ss_pred ccccceEEEeCCC----CCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEec
Q 004141 97 EMTGASAVVPSPS----GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 97 ~~~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
+...+...++||| |++++-.... ..++.+ .++ +.+.....+. |+.+....+||||+.++-..-
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~----~~v~~l-~~g--~lv~ss~~g~------d~~V~~~~~s~dG~~~~s~~~ 176 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI----KAVLGL-TKR--RLVSSSGTLS------DQQVEVMTFAEDGGGKENQFL 176 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE----EEEEEE-TTT--EEEEEESSST------TCEEEEEEECTTSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe----EEEEec-CCC--cEEEecccCC------CCcEEEEEECCCCceeeeecc
Confidence 3346778889999 8888763321 112222 222 2222211111 223367889999987664322
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccC--CcCccc-CCccCceEEEEEccCCceee-ccCCC-CCCccceEEE
Q 004141 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETY-AGKRQPSLFVININSGEVQA-VKGIP-KSLSVGQVVW 247 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~-~~~~~~~l~v~d~~~~~~~~-l~~~~-~~~~~~~~~w 247 (771)
... ......|++ +-++.+ .+..+..|.+||+.+|+... +.+.. ....+...+|
T Consensus 177 ~~~----------------------~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 177 MPP----------------------EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp CCC----------------------SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCC----------------------ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 111 011122333 112333 33567899999999998544 42111 1124556689
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC------CCCccccc
Q 004141 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT------ESISSAFF 321 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt------~~~~~~~~ 321 (771)
||||+. ++..+....... ...-.....|..+|. .++...... .+.....+
T Consensus 235 SpdG~~----lvs~s~~~~~w~---laSGs~D~tIklWd~-----------------~tgk~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 235 SEMGLL----FIVLSHPCAKES---ESLRSPVFQLIVINP-----------------KTTLSVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp EETTEE----EEEEC---------------CCEEEEEEET-----------------TTTEEEEEEEECCCTTCCCCEEE
T ss_pred CCCCCE----EEEeccCCCcce---eeccCCCcEEEEEEC-----------------CCCEEEEEEEeeccCCCcceeEc
Confidence 999997 766543111000 001123346666776 555432211 11111112
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004141 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~ 401 (771)
.. .+|..++-.+.+ ..|.+||+.+++......+..+ .....++|||||+
T Consensus 291 g~--~sg~~lASgS~D-----------gTIkIWDl~tGk~l~tL~gH~~------------------~vvs~vafSPDG~ 339 (356)
T 2w18_A 291 GD--VKDHCAAAILTS-----------GTIAIWDLLLGQCTALLPPVSD------------------QHWSFVKWSGTDS 339 (356)
T ss_dssp EE--EETTEEEEEETT-----------SCEEEEETTTCSEEEEECCC--------------------CCCCEEEECSSSS
T ss_pred cc--cCCCEEEEEcCC-----------CcEEEEECCCCcEEEEecCCCC------------------CeEEEEEECCCCC
Confidence 22 225555544443 3589999998775322111100 0122368999999
Q ss_pred EEEEEeeeCCeeEEEEE
Q 004141 402 TMLLSSIWGSSQVIISV 418 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~ 418 (771)
+| ++.+.++..+||.+
T Consensus 340 ~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 HL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp EE-EEECTTSCEEEEEE
T ss_pred EE-EEEECCCcEEEecC
Confidence 65 56667777788753
No 438
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.45 E-value=1.3e-05 Score=86.91 Aligned_cols=306 Identities=9% Similarity=-0.021 Sum_probs=156.8
Q ss_pred eechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEE
Q 004141 61 SQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKE 138 (771)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~ 138 (771)
+..-+..+...+.+.+|++... .....+. .....+....|+ ++.++..+..+ .+.+| ..++....
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~-~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg-----~i~vwd~~~~~~~~~ 194 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTG-KCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDR-----TLKVWNAETGECIHT 194 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTC-CEEEECC-----CCSSCEEEEEEE--TTEEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred cCCEEEEEECCCcEEEEECCCC-cEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCC-----eEEEEECCcCcEEEE
Confidence 3333344445567777776432 1112221 122456777776 55676654432 34555 33333332
Q ss_pred EecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCc
Q 004141 139 FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 218 (771)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 218 (771)
..... + .+.++.|+ ++.|+..+.+.... .|+............+........+ +....+++....
T Consensus 195 ~~~h~---~------~v~~~~~~--~~~l~s~s~dg~i~--~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 195 LYGHT---S------TVRCMHLH--EKRVVSGSRDATLR--VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp ECCCS---S------CEEEEEEE--TTEEEEEETTSEEE--EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred ECCCC---C------cEEEEEec--CCEEEEEeCCCEEE--EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 22111 1 12466664 56677766554322 2222111111111111222222233 334455566678
Q ss_pred eEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhh
Q 004141 219 SLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 298 (771)
Q Consensus 219 ~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~ 298 (771)
.|.+||+.+++..... ......+..+.| |++. |+..+ .+..|.++|+
T Consensus 260 ~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~---------------~d~~i~i~d~----------- 306 (445)
T 2ovr_B 260 MVKVWDPETETCLHTL-QGHTNRVYSLQF--DGIH----VVSGS---------------LDTSIRVWDV----------- 306 (445)
T ss_dssp CEEEEEGGGTEEEEEE-CCCSSCEEEEEE--CSSE----EEEEE---------------TTSCEEEEET-----------
T ss_pred EEEEEECCCCcEeEEe-cCCCCceEEEEE--CCCE----EEEEe---------------CCCeEEEEEC-----------
Confidence 9999999988765441 223345666666 7776 66554 3347888887
Q ss_pred hhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc
Q 004141 299 LKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC 377 (771)
Q Consensus 299 ~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 377 (771)
.+++ ...+..+...+.. ++++++.|+..+.+ ..|.+||+.+++.... +..
T Consensus 307 ------~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~----------~~~ 357 (445)
T 2ovr_B 307 ------ETGNCIHTLTGHQSLTSG--MELKDNILVSGNAD-----------STVKIWDIKTGQCLQT----------LQG 357 (445)
T ss_dssp ------TTCCEEEEECCCCSCEEE--EEEETTEEEEEETT-----------SCEEEEETTTCCEEEE----------ECS
T ss_pred ------CCCCEEEEEcCCcccEEE--EEEeCCEEEEEeCC-----------CeEEEEECCCCcEEEE----------Ecc
Confidence 4444 3445444444443 44567777766544 3588999877553211 100
Q ss_pred cCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec------CCCCCceeeEEeecCCEEEEEE
Q 004141 378 AEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT------PAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 378 ~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~------~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
... ....+..++| +++.| ++...++. |..+|+.+++..... ...+.+....|++++..++...
T Consensus 358 ~~~------~~~~v~~~~~--~~~~l-~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 358 PNK------HQSAVTCLQF--NKNFV-ITSSDDGT--VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp TTS------CSSCEEEEEE--CSSEE-EEEETTSE--EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred CCC------CCCCEEEEEE--CCCEE-EEEeCCCe--EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 000 0012233455 45544 55555555 444578788755432 1222344567888877666666
Q ss_pred eCCCCCCeEEEEEecc
Q 004141 452 SSPVDVPQVKYGYFVD 467 (771)
Q Consensus 452 ~~~~~p~~l~~~~~~~ 467 (771)
.+.+.+..+++.++..
T Consensus 427 ~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 427 RNGTEETKLLVLDFDV 442 (445)
T ss_dssp SSSSSCCEEEEEECCC
T ss_pred cCCCCccEEEEEECCC
Confidence 6666678888888753
No 439
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.41 E-value=4.4e-06 Score=90.34 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=59.6
Q ss_pred CceEEEEEccCC-----ce------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004141 217 QPSLFVININSG-----EV------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 217 ~~~l~v~d~~~~-----~~------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
...|.+||+.++ +. ..+. ......+..++|+|++.. ++.++. .+..|.++
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~----~las~s--------------~Dg~v~iw 177 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGMVIDMKWNPTVPS----MVAVCL--------------ADGSIAVL 177 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGSEEEEEECSSCTT----EEEEEE--------------TTSCEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeecc-CCCCCceEEEEECCCCCC----EEEEEE--------------CCCeEEEE
Confidence 368899998764 11 1110 122446889999999544 544442 23368888
Q ss_pred ecccccchhhhhhhhcCCCCCCcce-ecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004141 286 RVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
|+ .++... ....+...+...+|||||++|+..+.+. .|.+||..
T Consensus 178 D~-----------------~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-----------~v~iwd~~ 222 (434)
T 2oit_A 178 QV-----------------TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-----------TVVQYLPT 222 (434)
T ss_dssp EE-----------------SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS-----------CEEEECTT
T ss_pred Ec-----------------CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC-----------cEEEEccC
Confidence 87 444322 2223345688899999999998777553 48888876
No 440
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.37 E-value=1.1e-06 Score=93.21 Aligned_cols=107 Identities=13% Similarity=0.083 Sum_probs=67.0
Q ss_pred CCcEEEEEcCCCCCC------CCCcch----HHHHHHHHCCcEEEEECCCCCCCCChhhhhcC---------CCCcc---
Q 004141 536 CDPLIVVLHGGPHSV------SLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL---------PGKVG--- 593 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~------~~~~~~----~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~---------~~~~~--- 593 (771)
..|.||++||.+... ....|. ..+..|+++||.|+++|++| +|.+..... .+..+
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~~~~l~~~i~~g~g~sg~~~ 127 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHERAVELYYYLKGGRVDYGAAH 127 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHHHHHHHHHHHCEEEECCHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccchHHhhhhhhhccccccccc
Confidence 456799999965431 123343 47888899999999999999 444321100 00000
Q ss_pred ------ccchhhHHHHHHHHHHcCCCC-CCeEEEEEcChhHHHHHHHHhh--------------------------CCCc
Q 004141 594 ------SQDVNDVLTAIDHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQ--------------------------APDK 640 (771)
Q Consensus 594 ------~~~~~D~~~~i~~l~~~~~~d-~~ri~l~G~S~GG~~a~~~a~~--------------------------~p~~ 640 (771)
....+|+.+.++ . .. .+++.|+||||||.++..++.. +|++
T Consensus 128 ~~~~~~~~~a~dl~~ll~----~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~ 201 (431)
T 2hih_A 128 SEKYGHERYGKTYEGVLK----D--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNM 201 (431)
T ss_dssp HHHHTCCSEEEEECCSCT----T--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSC
T ss_pred cccCCHHHHHHHHHHHHH----H--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccc
Confidence 000111111111 1 12 3789999999999999998765 6889
Q ss_pred eeEEEecCCcc
Q 004141 641 FVAAAARNPLC 651 (771)
Q Consensus 641 ~~~~v~~~p~~ 651 (771)
++.+|++++..
T Consensus 202 V~slv~i~tP~ 212 (431)
T 2hih_A 202 VTSITTIATPH 212 (431)
T ss_dssp EEEEEEESCCT
T ss_pred eeEEEEECCCC
Confidence 99999888754
No 441
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.37 E-value=6.3e-05 Score=77.00 Aligned_cols=196 Identities=11% Similarity=0.024 Sum_probs=104.6
Q ss_pred ceEEEEEccCCceeec-cCCCC---CCccceEEEecCCCCCccEEEEEeecCcceeeeee-eeccCCceeEEEecccccc
Q 004141 218 PSLFVININSGEVQAV-KGIPK---SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK-YCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l-~~~~~---~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~l~~~d~~~~~~ 292 (771)
..|+++|.+ ++.+.+ ..... ...+..++++|||+ |++...........+. ........||+++.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-----l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 160 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-----LWITAPAGEVAPADYTRSMQEKFGSIYCFTT----- 160 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-----EEEEECBCBCTTSCCCBTTSSSCEEEEEECT-----
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-----EEEEecCcccccccccccccCCCCeEEEECC-----
Confidence 368899988 776654 21111 12467889999986 7666532100000000 00011247888886
Q ss_pred hhhhhhhhcCCCCCCcceecCCCCccccceeec----CCCCEEEEEecCCCCCCCCccccccceeeecC-CCCCCCCccc
Q 004141 293 EASELELKESSSEDLPVVNLTESISSAFFPRFS----PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEK 367 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~S----pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~ 367 (771)
+ ++.+.+..........+|+ |||+.|++..... ..|+++|++ ++....
T Consensus 161 ------------~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~----------~~i~~~~~~~~g~~~~---- 213 (314)
T 1pjx_A 161 ------------D-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT----------KKLWSYDIKGPAKIEN---- 213 (314)
T ss_dssp ------------T-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT----------TEEEEEEEEETTEEEE----
T ss_pred ------------C-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC----------CeEEEEECCCCCcccc----
Confidence 4 5444443333345677899 9998877665432 468888875 222100
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeeEEeecCCE
Q 004141 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDN 446 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~dg~~ 446 (771)
..+...+ .. ..+ ..+..+++++||+ |+++... ...|+++|.++++. ..+...........++++++.
T Consensus 214 -~~~~~~~--~~-~~~-----~~p~~i~~d~~G~-l~v~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 214 -KKVWGHI--PG-THE-----GGADGMDFDEDNN-LLVANWG--SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT 281 (314)
T ss_dssp -EEEEEEC--CC-CSS-----CEEEEEEEBTTCC-EEEEEET--TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred -ceEEEEC--CC-CCC-----CCCCceEECCCCC-EEEEEcC--CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCE
Confidence 0000000 00 000 0123567888986 5555432 23688889886654 334333233455667889887
Q ss_pred EEEEEeCCCCCCeEEEEEec
Q 004141 447 IIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 447 l~~~~~~~~~p~~l~~~~~~ 466 (771)
|++..... ..|+++++.
T Consensus 282 l~v~~~~~---~~l~~~~~~ 298 (314)
T 1pjx_A 282 IFVTEHEN---NAVWKFEWQ 298 (314)
T ss_dssp EEEEETTT---TEEEEEECS
T ss_pred EEEEeCCC---CeEEEEeCC
Confidence 77765432 467777754
No 442
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.33 E-value=2.6e-05 Score=76.89 Aligned_cols=181 Identities=17% Similarity=0.123 Sum_probs=107.1
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|.++|++++++..-...+. ......++++|+. |+...|. ...++++|.
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~----lyv~t~~--------------~~~v~viD~--------- 93 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEK----LYQVVWL--------------KNIGFIYDR--------- 93 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEETT--------------CSEEEEEET---------
T ss_pred CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCE----EEEEEec--------------CCEEEEEEC---------
Confidence 4789999999998766521222 2233345566776 7777643 237999997
Q ss_pred hhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 297 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.+ ..++... ......+++||++|+ .++. ...|+++|..+.+... .+
T Consensus 94 --------~t~~v~~~i~~g--~~~g~glt~Dg~~l~-vs~g----------s~~l~viD~~t~~v~~----------~I 142 (266)
T 2iwa_A 94 --------RTLSNIKNFTHQ--MKDGWGLATDGKILY-GSDG----------TSILYEIDPHTFKLIK----------KH 142 (266)
T ss_dssp --------TTTEEEEEEECC--SSSCCEEEECSSSEE-EECS----------SSEEEEECTTTCCEEE----------EE
T ss_pred --------CCCcEEEEEECC--CCCeEEEEECCCEEE-EECC----------CCeEEEEECCCCcEEE----------EE
Confidence 5544 3344322 122345889999876 4542 2579999987755311 11
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeeEEe
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 441 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s 441 (771)
..... ..| ...+..+.|. || +||... + ....|.+||++++++.....-. .......++
T Consensus 143 ~Vg~~-~~p---~~~~nele~~-dg-~lyvn~-~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 143 NVKYN-GHR---VIRLNELEYI-NG-EVWANI-W-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ECEET-TEE---CCCEEEEEEE-TT-EEEEEE-T-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EECCC-Ccc---cccceeEEEE-CC-EEEEec-C-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 11100 000 0012344566 66 565443 2 3458999999999876443221 123567899
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 442 LDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 442 ~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
++++.++++.... +.++.+++...
T Consensus 215 ~~~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCCCEEEEECCCC---CeEEEEEEecc
Confidence 9999998877544 66888887643
No 443
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.33 E-value=7e-06 Score=89.33 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=69.0
Q ss_pred ccceEEEeCC-----CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceee-c-CCCCeEE
Q 004141 99 TGASAVVPSP-----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISW-N-SDETLIA 168 (771)
Q Consensus 99 ~~~~~~~~SP-----dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~w-S-pDg~~la 168 (771)
+..-+|..|. ||+++ |+.+. .+..+-+|+ +..+..+++.++. +.| ++.+ + ||+++|+
T Consensus 85 gd~hh~~~s~t~g~~DG~~l-fVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~ph----------g~~~~~~p~~~~v~ 151 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFL-FMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIH----------GLRPQKWPRSNYVF 151 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEE-EEEET--TTTEEEEEETTTTEEEEEEECSSCCSEE----------EEEECCSSBCSEEE
T ss_pred CCCCccccCCCCCCcCCCEE-EEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCc----------ceeeeecCCCcEEE
Confidence 4455688888 99988 55332 456788888 6667777777653 333 6676 6 9999986
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEe
Q 004141 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 248 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ws 248 (771)
...+...+-.+ . +..++.++ .....+-++|.++.++..- .+-.........|
T Consensus 152 ~~~~~~~p~~~--------d-----------g~~l~~~~-------~~~~~vtvID~~t~~v~~q--I~Vgg~pd~~~~s 203 (595)
T 1fwx_A 152 CNGEDETPLVN--------D-----------GTNMEDVA-------NYVNVFTAVDADKWEVAWQ--VLVSGNLDNCDAD 203 (595)
T ss_dssp EEECSCEESSC--------S-----------SSSTTCGG-------GEEEEEEEEETTTTEEEEE--EEESSCCCCEEEC
T ss_pred EecccccccCC--------C-----------Cccccccc-------ccCceEEEEECCCCeEEEE--EEeCCCccceEEC
Confidence 55443221100 0 01111111 1346889999998876443 2222245678899
Q ss_pred cCCCC
Q 004141 249 PLNEG 253 (771)
Q Consensus 249 pDg~~ 253 (771)
|||++
T Consensus 204 pdGk~ 208 (595)
T 1fwx_A 204 YEGKW 208 (595)
T ss_dssp SSSSE
T ss_pred CCCCE
Confidence 99995
No 444
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=9.8e-05 Score=75.87 Aligned_cols=229 Identities=9% Similarity=-0.028 Sum_probs=134.1
Q ss_pred eEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCC
Q 004141 112 KLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 190 (771)
Q Consensus 112 ~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 190 (771)
+|+|.... .|..++ ++.+...++...... .++.|++++..|+++..
T Consensus 3 ~ll~~~~~-----~I~~i~~~~~~~~~~~~~~~~p----------~g~~~d~~~~~ly~~D~------------------ 49 (316)
T 1ijq_A 3 YLFFTNRH-----EVRKMTLDRSEYTSLIPNLRNV----------VALDTEVASNRIYWSDL------------------ 49 (316)
T ss_dssp EEEEECBS-----SEEEEETTSCCCEEEECSCSSE----------EEEEEETTTTEEEEEET------------------
T ss_pred EEEEECCC-----eEEEEECCCcceEehhcCCCce----------EEEEEEeCCCEEEEEEC------------------
Confidence 45555333 377777 444444444322222 48899999888877632
Q ss_pred CCccCCCCCCcccccCCcCcccCCccCceEEEEEccC----CceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecC
Q 004141 191 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS----GEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 191 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~----~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
....|+++++++ .....+ ... -..+..+++.+.++. |+++..
T Consensus 50 -------------------------~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~----ly~~d~-- 96 (316)
T 1ijq_A 50 -------------------------SQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS-- 96 (316)
T ss_dssp -------------------------TTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTE----EEEEET--
T ss_pred -------------------------CCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCe----EEEEEC--
Confidence 236889999886 333333 222 234567888887776 776541
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCC
Q 004141 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
....|.++++ ++...+.+.. ........++.|++..|+|.....
T Consensus 97 ------------~~~~I~~~~~-----------------~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------ 141 (316)
T 1ijq_A 97 ------------VLGTVSVADT-----------------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------ 141 (316)
T ss_dssp ------------TTTEEEEEET-----------------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS------
T ss_pred ------------CCCEEEEEeC-----------------CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC------
Confidence 2237889997 5554444433 334567788999989888876431
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004141 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+|+++++++...+.+... .-. ....++|++++++||++.. ....|+++++++..
T Consensus 142 ---~~~I~~~~~dG~~~~~~~~~------------~~~-------~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 142 ---PAKIKKGGLNGVDIYSLVTE------------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGN 197 (316)
T ss_dssp ---SCEEEEEETTSCCEEEEECS------------SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS
T ss_pred ---CCeEEEEcCCCCCeEEEEEC------------CCC-------CceEEEEeccCCEEEEEEC--CCCeEEEEecCCCc
Confidence 24699998765332111000 001 1346789999888988754 34578999998766
Q ss_pred EEEecCCC-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 425 LLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 425 ~~~l~~~~-~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
.+.+.... ....-..++.+++.+|++.. ...+|++++..++
T Consensus 198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g 239 (316)
T 1ijq_A 198 RKTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTG 239 (316)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTC
T ss_pred eEEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCC
Confidence 66554321 11112244556788877663 3356777775433
No 445
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.29 E-value=2.4e-06 Score=89.30 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=65.0
Q ss_pred CCcEEEEEcCCCCCCCC-----Ccch----HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHH
Q 004141 536 CDPLIVVLHGGPHSVSL-----SSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 606 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~-----~~~~----~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~ 606 (771)
..+.||++||..+.... ..|. ..++.|+++||.|+++|++| +|.+... ..++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~~----------a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWDR----------ACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHHH----------HHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCcccc----------HHHHHHHHHh
Confidence 34569999996554211 1233 34588889999999999998 5443210 1122222221
Q ss_pred --------HHHc---------------CCCCCCeEEEEEcChhHHHHHHHHhh-------------------CC------
Q 004141 607 --------VIDM---------------GLANPSKVTVVGGSHGGFLTTHLIGQ-------------------AP------ 638 (771)
Q Consensus 607 --------l~~~---------------~~~d~~ri~l~G~S~GG~~a~~~a~~-------------------~p------ 638 (771)
+.+. .....+++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1000 00235789999999999999999872 35
Q ss_pred CceeEEEecCCcc
Q 004141 639 DKFVAAAARNPLC 651 (771)
Q Consensus 639 ~~~~~~v~~~p~~ 651 (771)
++++.+|++++..
T Consensus 152 ~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 152 HFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEEESCCT
T ss_pred cceeEEEEECCCC
Confidence 6889998887643
No 446
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=0.00012 Score=77.65 Aligned_cols=180 Identities=11% Similarity=0.002 Sum_probs=111.0
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++++++..+.+. ...-.....+++.+.+.. |+++-. ....|+++++
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----lY~~d~--------------~~~~I~~~~~---------- 188 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 188 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTE----EEEEET--------------TTTEEEECBT----------
T ss_pred CcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCe----EEEEcC--------------CCCeEEEEeC----------
Confidence 68999999988766652 222235567888888776 777642 2237888887
Q ss_pred hhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004141 298 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++...+.+. .........++.|++..|+|..... ..+|+++++++...+.+...
T Consensus 189 -------dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~--------- 243 (386)
T 3v65_B 189 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADT--------- 243 (386)
T ss_dssp -------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS---------
T ss_pred -------CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCcEEEEEC---------
Confidence 554444443 3334567789999999998876432 25799999876443222110
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCC
Q 004141 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 456 (771)
.-. ....++|++++++||++-. ....|++++++++..+.+..... ..-..++.+++.||++.. .
T Consensus 244 ---~~~-------~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~---~ 307 (386)
T 3v65_B 244 ---HLF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDW---H 307 (386)
T ss_dssp ---SCS-------CEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSC-SSEEEEEEETTEEEEEET---T
T ss_pred ---CCC-------CeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCC-CCceEEEEECCEEEEeeC---C
Confidence 000 1346789988888988754 34579999987766555543322 112234446777777653 3
Q ss_pred CCeEEEEEecc
Q 004141 457 VPQVKYGYFVD 467 (771)
Q Consensus 457 p~~l~~~~~~~ 467 (771)
...|.+++..+
T Consensus 308 ~~~V~~~~~~~ 318 (386)
T 3v65_B 308 TKSINSANKFT 318 (386)
T ss_dssp TTEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 35677766333
No 447
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.28 E-value=0.00038 Score=71.96 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=63.1
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....+++||+..|+..... ..+|.+++..+++... .+...... ..+..++++|
T Consensus 198 p~gia~d~~~g~l~v~d~~----------~~~I~~~~~~~G~~~~----------~~~~~~~~-------~~~~~~~~~p 250 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE----------NGRIQCFKTDTKEFVR----------EIKHASFG-------RNVFAISYIP 250 (329)
T ss_dssp EEEEEEETTTTEEEEEETT----------TTEEEEEETTTCCEEE----------EECCTTTT-------TCEEEEEEET
T ss_pred CcEEEEECCCCEEEEEECC----------CCEEEEEECCCCcEEE----------EEeccccC-------CCcceeeecC
Confidence 5678999997767665543 2568999987554311 11000000 1123455677
Q ss_pred CCCEEEEEee-----eCCeeEEEEEECCCCcEEEecC----CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 399 DGCTMLLSSI-----WGSSQVIISVNVSSGELLRITP----AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 399 Dg~~l~~~~~-----~~~~~~l~~~d~~tg~~~~l~~----~~~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
| .++.... ......++.++..+|++..... .........++++| .|+++.... .+|.++++.
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~---~~I~~~~~~ 321 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHT---NTVWKFTLT 321 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSS---CCEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCC---CEEEEEeCC
Confidence 3 2322221 1223468888988888776642 11234456778888 666655433 357776654
No 448
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.26 E-value=3.5e-05 Score=80.42 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=50.8
Q ss_pred eeecCCCCEEEEEec-C-CCCCCCCccccccceeeecCCCCCCC-CccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 322 PRFSPDGKFLVFLSA-K-SSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 322 p~~SpDG~~l~f~~~-~-~~~~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
..++|||++|++... . ... .+ ....+.++|+.+.+... +..+. ....+.|++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~-~~---~~~~~~ViD~~t~~vv~~i~vg~---------------------~p~gi~~s~ 323 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSC-LA---AAENTSSVTASVGQTSGPISNGH---------------------DSDAIIAAQ 323 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCT-TS---CEEEEEEEESSSCCEEECCEEEE---------------------EECEEEECC
T ss_pred eEEcCCCCEEEEEeccccCcc-cc---cCCCEEEEECCCCeEEEEEECCC---------------------CcceEEECC
Confidence 579999999876543 1 100 00 01234599998866421 11111 134678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004141 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
||++++++... +...+..||+.++++..-..
T Consensus 324 Dg~~l~va~~~-~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 324 DGASDNYANSA-GTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp SSSCEEEEEET-TTTEEEEEESSSCEEEEECC
T ss_pred CCCEEEEEccC-CCCeEEEEECCCCcEEEEEE
Confidence 99988777652 23568888999998775543
No 449
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.24 E-value=0.00019 Score=74.86 Aligned_cols=177 Identities=11% Similarity=0.005 Sum_probs=109.1
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++++++..+.+. ...-.....+++.+.+.. |+++.. ....|+++++
T Consensus 95 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~---------- 145 (349)
T 3v64_C 95 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 145 (349)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CceEEEecCCCCceEEE-eCCCCCccEEEEecCCCe----EEEEcC--------------CCCeEEEEcC----------
Confidence 68999999988766652 122234567888887776 777642 2237999997
Q ss_pred hhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004141 298 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++...+.+. .........++.|++..|+|..... ..+|+++++++...+.+....
T Consensus 146 -------dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~~-------- 201 (349)
T 3v64_C 146 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADTH-------- 201 (349)
T ss_dssp -------TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEESCCSS--------
T ss_pred -------CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---------CCEEEEEeCCCCCcEEEEECC--------
Confidence 555444443 3334567789999999898886432 257999998765432221110
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCC
Q 004141 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 456 (771)
.. ....+++++++++||++-. ....|+++++++...+.+..... ..-..++.+++.||++-..
T Consensus 202 ----~~-------~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~~--- 264 (349)
T 3v64_C 202 ----LF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDWH--- 264 (349)
T ss_dssp ----CS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEETT---
T ss_pred ----CC-------CcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEecCC---
Confidence 01 1346789998888988754 34579999998766555543221 1112333466777766432
Q ss_pred CCeEEEEE
Q 004141 457 VPQVKYGY 464 (771)
Q Consensus 457 p~~l~~~~ 464 (771)
...|.+++
T Consensus 265 ~~~V~~~~ 272 (349)
T 3v64_C 265 TKSINSAN 272 (349)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 34566665
No 450
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.24 E-value=0.00012 Score=73.15 Aligned_cols=175 Identities=5% Similarity=-0.048 Sum_probs=96.2
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.+++....+. ......+..++++|||+ |++... ....|++++.
T Consensus 87 ~~i~~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 136 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLP-FDGLNYPEGLAVDTQGA-----VYVADR--------------GNNRVVKLAA---------- 136 (270)
T ss_dssp TEEEEECTTCSCCEECC-CCSCSSEEEEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEeCCCceEeeee-cCCcCCCcceEECCCCC-----EEEEEC--------------CCCEEEEEEC----------
Confidence 57888998877665552 12223567889999886 665531 1236888875
Q ss_pred hhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004141 298 ELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
.+........ ........+++|||+ |++.... ...|+++|..++.......
T Consensus 137 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~---------- 188 (270)
T 1rwi_B 137 -------GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD----------NNRVVKLEAESNNQVVLPF---------- 188 (270)
T ss_dssp -------TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG----------GTEEEEECTTTCCEEECCC----------
T ss_pred -------CCceeEeeccccCCCceeEEEeCCCC-EEEEECC----------CCEEEEEecCCCceEeecc----------
Confidence 3333222222 223467789999998 5544432 2468999876644211100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeeEEeecCCEEEEEEeCCC
Q 004141 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
..+ ..+..+++.+|| .|+++... ...|++++.++.....+.... .......++++|+ |+++...
T Consensus 189 ----~~~-----~~p~~i~~d~~g-~l~v~~~~--~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~-- 253 (270)
T 1rwi_B 189 ----TDI-----TAPWGIAVDEAG-TVYVTEHN--TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRG-- 253 (270)
T ss_dssp ----SSC-----CSEEEEEECTTC-CEEEEETT--TSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGG--
T ss_pred ----cCC-----CCceEEEECCCC-CEEEEECC--CCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECC--
Confidence 000 123456788888 46665432 335788888766555443222 2234455666765 5544432
Q ss_pred CCCeEEEEEec
Q 004141 456 DVPQVKYGYFV 466 (771)
Q Consensus 456 ~p~~l~~~~~~ 466 (771)
-.+|.++++.
T Consensus 254 -~~~v~~~~~~ 263 (270)
T 1rwi_B 254 -NDRVVKLTSL 263 (270)
T ss_dssp -GTEEEEECCC
T ss_pred -CCEEEEEcCC
Confidence 2345655543
No 451
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.22 E-value=5e-05 Score=74.86 Aligned_cols=204 Identities=9% Similarity=0.016 Sum_probs=117.7
Q ss_pred eEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004141 102 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 102 ~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
....|+||| + +|++....+...+..++ ..++..+.+.++...+ ...++++|++|+....
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f----------geGi~~~g~~lyv~t~-------- 83 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF----------GEGLTLLNEKLYQVVW-------- 83 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEET--------
T ss_pred ccEEEeCCC-e-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc----------eEEEEEeCCEEEEEEe--------
Confidence 567899996 4 46665433567788888 6777777666644332 3345556777766533
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004141 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....++++|.++.++..- ++.. .......++||++ |+.
T Consensus 84 -----------------------------------~~~~v~viD~~t~~v~~~--i~~g-~~~g~glt~Dg~~----l~v 121 (266)
T 2iwa_A 84 -----------------------------------LKNIGFIYDRRTLSNIKN--FTHQ-MKDGWGLATDGKI----LYG 121 (266)
T ss_dssp -----------------------------------TCSEEEEEETTTTEEEEE--EECC-SSSCCEEEECSSS----EEE
T ss_pred -----------------------------------cCCEEEEEECCCCcEEEE--EECC-CCCeEEEEECCCE----EEE
Confidence 236899999998876543 2221 1234567889997 764
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCC--c---cccceeecCCCCEEEEE
Q 004141 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI--S---SAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~--~---~~~~p~~SpDG~~l~f~ 334 (771)
++ ....|+.+|. ++.+ ...+.-.. . ......|. || +| |.
T Consensus 122 -s~--------------gs~~l~viD~-----------------~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~l-yv 166 (266)
T 2iwa_A 122 -SD--------------GTSILYEIDP-----------------HTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EV-WA 166 (266)
T ss_dssp -EC--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TT-EE-EE
T ss_pred -EC--------------CCCeEEEEEC-----------------CCCcEEEEEEECCCCcccccceeEEEE-CC-EE-EE
Confidence 43 2237999997 5544 33333211 1 13345677 77 44 44
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc-C--CCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-E--GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~--~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~ 411 (771)
.... ...|.++|.++++... .+++-... . ....+ ....+..++|+||++++|++. ..
T Consensus 167 n~~~---------~~~V~vID~~tg~V~~-------~I~~~g~~~~~~~~~~~--~~~v~nGIa~~~~~~~lfVTg--k~ 226 (266)
T 2iwa_A 167 NIWQ---------TDCIARISAKDGTLLG-------WILLPNLRKKLIDEGFR--DIDVLNGIAWDQENKRIFVTG--KL 226 (266)
T ss_dssp EETT---------SSEEEEEETTTCCEEE-------EEECHHHHHHHHHTTCT--TCCCEEEEEEETTTTEEEEEE--TT
T ss_pred ecCC---------CCeEEEEECCCCcEEE-------EEECCCccccccccccc--ccCceEEEEEcCCCCEEEEEC--CC
Confidence 4432 3579999998877521 11110000 0 00000 001235678999999887764 45
Q ss_pred eeEEEEEECCC
Q 004141 412 SQVIISVNVSS 422 (771)
Q Consensus 412 ~~~l~~~d~~t 422 (771)
+..||.|++..
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 56788888654
No 452
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.22 E-value=0.00021 Score=74.36 Aligned_cols=111 Identities=11% Similarity=-0.008 Sum_probs=58.2
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....+|||||+.|++..... .+||.++........+.... +...+...... .....+++++
T Consensus 197 ~~gia~s~dg~~ly~~~~~~----------~~l~~~~~~~~~~~~~~~~~--~~~~~~~~g~~-------g~pdgia~d~ 257 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHS----------TSMYRIKSADLSNLQLTDAE--LGSKIERYSEK-------PICDGISIDK 257 (343)
T ss_dssp EEEEEECTTSCEEEEEESSC----------SEEEEEEHHHHTCTTCCHHH--HHTTCEEEEEC-------CSCSCEEECT
T ss_pred cceeEeccCCCEEEEEeCCC----------CeEEEEEHHHhcCCCCChhh--hhcceEecccC-------CCCceEEECC
Confidence 45689999999998877542 46888874311100011000 00000000000 0234678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--CCceeeEEeecCCEEEEEEe
Q 004141 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--~~~~~~~~s~dg~~l~~~~~ 452 (771)
||. |+++... ...|+++|.++|++..+.... .......+++++. |+++.+
T Consensus 258 ~G~-l~va~~~--~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 258 DHN-IYVGDLA--HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp TCC-EEEEEGG--GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred CCC-EEEEccC--CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 986 6555432 346888898667776665332 1233456666654 555544
No 453
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.22 E-value=1.5e-05 Score=86.78 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=58.2
Q ss_pred ceEEEEEccC--Cce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004141 218 PSLFVININS--GEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 218 ~~l~v~d~~~--~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
..+-|+|..+ +++ ... ++.......+.+||||++ ++... . ...++.++|+....
T Consensus 254 ~~V~VID~~~~~~~~~~~~--Ipvg~~PhGv~~sPDGk~----v~V~~-~-------------~s~~VsVid~~~~~--- 310 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRY--IPIANNPHGCNMAPDKKH----LCVAG-K-------------LSPTVTVLDVTRFD--- 310 (595)
T ss_dssp TTEEEEECSGGGCCSSEEE--EEEESSCCCEEECTTSSE----EEEEC-T-------------TSSBEEEEEGGGHH---
T ss_pred CcEEEEeCcccCCceeEEE--EecCCCceEEEEcCCCCE----EEEeC-C-------------CCCeEEEEECcccc---
Confidence 4589999987 443 323 333446678899999996 55443 2 22378899972100
Q ss_pred hhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC
Q 004141 295 SELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 295 ~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
.+ +......... ...+ .-.......+|+||| . +|++..- .+++.+||+++
T Consensus 311 -~~-~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~-aY~t~~l---------dsqV~kwdi~~ 361 (595)
T 1fwx_A 311 -AV-FYENADPRSAVVAEP-ELGLGPLHTAFDGRG-N-AYTSLFL---------DSQVVKWNIED 361 (595)
T ss_dssp -HH-HHSCCCGGGGEEECC-BCCSCEEEEEECTTS-E-EEEEETT---------TTEEEEEEHHH
T ss_pred -cc-cccccCcccceEEEc-CCCCCcceEEECCCC-e-EEEEEec---------CCcEEEEEhhH
Confidence 00 0000000001 1122 122346778999999 4 6777654 36788888765
No 454
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.21 E-value=0.00029 Score=71.99 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=120.9
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...++|+|+|+ | |+.+. ....++.++..+............ .+++++|||+ | |+++...
T Consensus 34 pegia~~~~g~-l-yv~d~--~~~~I~~~d~~g~~~~~~~~~~~p----------~gia~~~dG~-l-~vad~~~----- 92 (306)
T 2p4o_A 34 LENLASAPDGT-I-FVTNH--EVGEIVSITPDGNQQIHATVEGKV----------SGLAFTSNGD-L-VATGWNA----- 92 (306)
T ss_dssp EEEEEECTTSC-E-EEEET--TTTEEEEECTTCCEEEEEECSSEE----------EEEEECTTSC-E-EEEEECT-----
T ss_pred cceEEECCCCC-E-EEEeC--CCCeEEEECCCCceEEEEeCCCCc----------eeEEEcCCCc-E-EEEeccC-----
Confidence 45789999997 5 44443 234578777445444444443333 4889999998 4 4433210
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004141 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....|+.+|..+++++.+...+.......++..+++ . ++
T Consensus 93 -----------------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~----~~- 131 (306)
T 2p4o_A 93 -----------------------------------DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-Q----YL- 131 (306)
T ss_dssp -----------------------------------TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-E----EE-
T ss_pred -----------------------------------CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-c----EE-
Confidence 123688888888887665212222222334433433 2 33
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cce---------ecCCCCccccceeecCCCC
Q 004141 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVV---------NLTESISSAFFPRFSPDGK 329 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~---------~lt~~~~~~~~p~~SpDG~ 329 (771)
++.. ....||.+|. .++ +.. ............ ||||+
T Consensus 132 v~d~-------------~~g~i~~~d~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 132 TADS-------------YRGAIWLIDV-----------------VQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp EEET-------------TTTEEEEEET-----------------TTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred EEEC-------------CCCeEEEEeC-----------------CCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 3321 2347888886 322 111 000111112222 89999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee
Q 004141 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 409 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~ 409 (771)
+|++.... ..+|+++++++.+. +.. ...... + .....+++.+||+ |+++..
T Consensus 180 ~lyv~d~~----------~~~I~~~~~~~~g~--~~~-~~~~~~---------~-----~~P~gi~vd~dG~-l~va~~- 230 (306)
T 2p4o_A 180 FLYVSNTE----------KMLLLRIPVDSTDK--PGE-PEIFVE---------Q-----TNIDDFAFDVEGN-LYGATH- 230 (306)
T ss_dssp EEEEEETT----------TTEEEEEEBCTTSC--BCC-CEEEEE---------S-----CCCSSEEEBTTCC-EEEECB-
T ss_pred EEEEEeCC----------CCEEEEEEeCCCCC--CCc-cEEEec---------c-----CCCCCeEECCCCC-EEEEeC-
Confidence 88776644 25799999875221 110 000110 0 1245678899996 555433
Q ss_pred CCeeEEEEEECCCCcEEEe---cCCCCCceeeEEe---ecCCEEEEEEeC
Q 004141 410 GSSQVIISVNVSSGELLRI---TPAESNFSWSLLT---LDGDNIIAVSSS 453 (771)
Q Consensus 410 ~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s---~dg~~l~~~~~~ 453 (771)
....|.+++.+ |++..+ ...........|. +|++.||++...
T Consensus 231 -~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 -IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -CCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 23457788875 666543 2221223445666 677888777654
No 455
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.19 E-value=0.00053 Score=71.40 Aligned_cols=162 Identities=9% Similarity=0.057 Sum_probs=105.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|.|.+..|.++-. ....|+.+. +++....+....... ..++++.+.+..|++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~~~~~~~~~~---------p~glavd~~~g~ly~~d~----- 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVEEVVSTGLES---------PGGLAVDWVHDKLYWTDS----- 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEEET-----
T ss_pred CceEEEEEeccccEEEEEec---cCCceEEEecCCCCceEEEeCCCCC---------ccEEEEecCCCeEEEEcC-----
Confidence 34677899998888866532 234677777 444444444322111 147888888888877522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|+++++++...+.+. ...-..+..+++.|++..
T Consensus 136 --------------------------------------~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~---- 172 (349)
T 3v64_C 136 --------------------------------------GTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGT---- 172 (349)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTE----
T ss_pred --------------------------------------CCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCe----
Confidence 2358999999887666552 122235678899998876
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+++.+.. ...|+++++ ++...+.+.. ........+|+|++++|+|...
T Consensus 173 ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 173 IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEEECSS-------------SCEEEEEET-----------------TSCSCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 77765321 247999998 5555555533 3334678899999999998875
Q ss_pred CCCCCCCCccccccceeeecCCCC
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.. ..|+++|+++..
T Consensus 223 ~~----------~~I~~~~~dG~~ 236 (349)
T 3v64_C 223 KH----------HVIERANLDGSH 236 (349)
T ss_dssp TT----------TEEEEEETTSCS
T ss_pred CC----------CEEEEEeCCCCc
Confidence 42 579999987643
No 456
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.17 E-value=0.00027 Score=75.21 Aligned_cols=182 Identities=8% Similarity=-0.064 Sum_probs=109.8
Q ss_pred ceEEEEEccCC----ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004141 218 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~----~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+.+++++. ....+. ...-..+..+++.+.++. |+++-. ....|+++++
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~----lY~~d~--------------~~~~I~~~~~------ 188 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 188 (400)
T ss_dssp TEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTE----EEEEET--------------TTTEEEEECT------
T ss_pred CeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCc----eEEEEC--------------CCCeEEEEeC------
Confidence 57888888762 333331 122234567788876776 776642 2237899998
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEE
Q 004141 294 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 372 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 372 (771)
++...+.+.. ........++.|.+..|+|..... ...|+++++++...+.+....
T Consensus 189 -----------~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~~~~~~---- 244 (400)
T 3p5b_L 189 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTEN---- 244 (400)
T ss_dssp -----------TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---------SCCEEEEETTSCSCEEEECSS----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---------CCEEEEEeCCCCccEEEEECC----
Confidence 5555544443 333467789999988898876432 246999998765432221100
Q ss_pred ecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEEE
Q 004141 373 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 373 ~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~dg~~l~~~~ 451 (771)
-. .+..+++++++++||++-. ....|++++++++..+.+..... ...-..++.+++.||++.
T Consensus 245 --------l~-------~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 245 --------IQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp --------CS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred --------CC-------ceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 01 1346788888888988743 34579999998777666654322 112235666888888776
Q ss_pred eCCCCCCeEEEEEeccc
Q 004141 452 SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 452 ~~~~~p~~l~~~~~~~~ 468 (771)
. ....|++++..++
T Consensus 308 ~---~~~~V~~~~~~~G 321 (400)
T 3p5b_L 308 I---INEAIFSANRLTG 321 (400)
T ss_dssp S---SSCSEEEEESSSC
T ss_pred C---CCCeEEEEEcCCC
Confidence 3 3345777764444
No 457
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.17 E-value=0.00024 Score=75.16 Aligned_cols=161 Identities=9% Similarity=0.073 Sum_probs=104.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|.+.+.+|.++- . ....|+.+. +++....++....... .++++.+.+..|++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~D-~--~~~~I~r~~~~g~~~~~~~~~~~~~p---------~glavd~~~g~lY~~d~----- 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSD-V--TLDRILRANLNGSNVEEVVSTGLESP---------GGLAVDWVHDKLYWTDS----- 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEEE-T--TTTEEEEEETTSCCEEEEECSSCSCC---------CCEEEETTTTEEEEEET-----
T ss_pred CccEEEEEecCCCeEEEEe-C--CCCcEEEEecCCCCcEEEEeCCCCCc---------cEEEEEeCCCeEEEEcC-----
Confidence 3467789999888886653 2 234678777 4444344433221111 47888888887877522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCcc
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~ 256 (771)
....|+++++++...+.+ .... ..+..++..|++..
T Consensus 179 --------------------------------------~~~~I~~~~~dg~~~~~l--~~~~l~~P~giavdp~~g~--- 215 (386)
T 3v65_B 179 --------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT--- 215 (386)
T ss_dssp --------------------------------------TTTEEEECBTTSCSCEEE--ECSSCSCEEEEEEETTTTE---
T ss_pred --------------------------------------CCCeEEEEeCCCCceEEe--ecCCCCCCcEEEEEcCCCe---
Confidence 235788888887765555 2322 35678899998886
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+++-+.. ...|+++++ ++...+.+. .........+|+|++++|+|..
T Consensus 216 -ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 216 -IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp -EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred -EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 77765321 237999998 555444443 3333467899999999999887
Q ss_pred cCCCCCCCCccccccceeeecCCCC
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
... ..|+++|+++..
T Consensus 265 ~~~----------~~I~~~d~dG~~ 279 (386)
T 3v65_B 265 AKH----------HVIERANLDGSH 279 (386)
T ss_dssp TTT----------TEEEEECTTSCS
T ss_pred CCC----------CEEEEEeCCCCe
Confidence 542 579999987643
No 458
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.10 E-value=0.00035 Score=74.53 Aligned_cols=158 Identities=12% Similarity=0.191 Sum_probs=89.8
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEE-ecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004141 104 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
++|+|+|+.|++. +.. +...++.+. .++...+.. ...... .....+++++|++..|++. .
T Consensus 176 ia~~~~g~~l~~~-d~~-~~~~I~~~d~~~~~~~~~~g~~~~~~------~~~p~~iav~p~~g~lyv~-d--------- 237 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWE-GTHTVYVYMKASGWAPTRIGQLGSTF------SGKIGAVALDETEEWLYFV-D--------- 237 (409)
T ss_dssp CEECTTSSEEEEE-BSS-TTCEEEEEEGGGTTCEEEEEECCTTS------CSCCCBCEECTTSSEEEEE-C---------
T ss_pred eeEecCCCcEEEE-ecC-CCceEEEEEcCCCceeEEeeeccchh------cCCcEEEEEeCCCCeEEEE-E---------
Confidence 8999999987554 332 223688877 433322222 111100 0122588999976667663 2
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC--CCCCC--ccc-eEEEecCCCCCcc
Q 004141 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSL--SVG-QVVWAPLNEGLHQ 256 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~--~~~~~--~~~-~~~wspDg~~~~~ 256 (771)
....|+++|++++....+.+ ..... .+. .++|+|++..
T Consensus 238 ----------------------------------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 238 ----------------------------------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN--- 280 (409)
T ss_dssp ----------------------------------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE---
T ss_pred ----------------------------------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE---
Confidence 12579999998887655410 11111 223 8999997765
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC---------------Cccccc
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES---------------ISSAFF 321 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~---------------~~~~~~ 321 (771)
|+++. . ....|++++. ++. ...+... ......
T Consensus 281 -lyv~d-~-------------~~~~I~~~~~-----------------~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 281 -FYMSD-Q-------------NLSSVYKITP-----------------DGE-CEWFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp -EEEEE-T-------------TTTEEEEECT-----------------TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred -EEEEe-C-------------CCCEEEEEec-----------------CCC-EEEEEeCCCCCCcCCCcccccEeCCCeE
Confidence 66553 1 2336888876 222 2222111 123567
Q ss_pred eeecCCCCEEEEEec-CCCCCCCCccccccceeeecCCCC
Q 004141 322 PRFSPDGKFLVFLSA-KSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 322 p~~SpDG~~l~f~~~-~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.+++|||+ |++... . ..+|+++++.++.
T Consensus 328 ia~d~dG~-lyvad~~~----------~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 328 MTVDEDGN-FYIVDGFK----------GYCLRKLDILDGY 356 (409)
T ss_dssp EEECTTCC-EEEEETTT----------TCEEEEEETTTTE
T ss_pred EEEeCCCC-EEEEeCCC----------CCEEEEEECCCCE
Confidence 88999998 665543 2 3568899876554
No 459
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.10 E-value=0.00051 Score=70.37 Aligned_cols=161 Identities=9% Similarity=0.014 Sum_probs=102.0
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcc-eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
......|.+.+..|.++ +. ....|+.+. +++.. ..+....... ..++++.+.+..|++.-.
T Consensus 36 ~~~~ld~d~~~~~lyw~-D~--~~~~I~r~~~~g~~~~~~~~~~~l~~---------p~glavd~~~g~ly~~d~----- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWS-DV--SEEAIKRTEFNKTESVQNVVVSGLLS---------PDGLACDWLGEKLYWTDS----- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEE-ET--TTTEEEEEETTSSSCCCEEEEECCSC---------CCEEEEETTTTEEEEEET-----
T ss_pred ccEEEEEEeCCCEEEEE-EC--CCCcEEEEEccCCCceEEEEcCCCCC---------ccEEEEEcCCCeEEEEEC-----
Confidence 35678899988888665 33 234677777 44322 2222221111 147888887877766521
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|.++++++...+.+. ...-..+..++..|++..
T Consensus 99 --------------------------------------~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~---- 135 (318)
T 3sov_A 99 --------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF---- 135 (318)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTE----
T ss_pred --------------------------------------CCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCE----
Confidence 2368899999887666652 122235678889998776
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec-CCCCccccceeecCCCCEEEEEec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+++.+. ....|+++++ ++...+.+ ..........+|+|++++|+|...
T Consensus 136 ly~td~~-------------~~~~I~r~~~-----------------dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 136 MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEEecC-------------CCCEEEEEEc-----------------CCCCeEEEEECCCCCccEEEEeccCCEEEEEEC
Confidence 7766432 1247999998 55444444 333345678899999999999875
Q ss_pred CCCCCCCCccccccceeeecCCCC
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.. ..|+++|+++..
T Consensus 186 ~~----------~~I~~~d~dG~~ 199 (318)
T 3sov_A 186 KL----------NFIHKSNLDGTN 199 (318)
T ss_dssp TT----------TEEEEEETTSCS
T ss_pred CC----------CEEEEEcCCCCc
Confidence 42 579999987644
No 460
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.06 E-value=0.00027 Score=76.46 Aligned_cols=264 Identities=14% Similarity=0.120 Sum_probs=138.0
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCcc
Q 004141 105 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 182 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 182 (771)
.++++|++|+..+..+ .+.+|+ .++..+.+. ...+. +..+.|+ ++.|+..+.+...+ .|+
T Consensus 124 ~~~~~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~---~h~~~------v~~~~~~--~~~l~s~~~dg~i~--vwd 185 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDN-----TLKVWSAVTGKCLRTLV---GHTGG------VWSSQMR--DNIIISGSTDRTLK--VWN 185 (445)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTCCEEEECC---CCSSC------EEEEEEE--TTEEEEEETTSCEE--EEE
T ss_pred EEEEcCCEEEEEECCC-----cEEEEECCCCcEEEEEc---CCCCC------EEEEEec--CCEEEEEeCCCeEE--EEE
Confidence 5778899998766543 455563 333222222 11111 2567776 55677766554332 232
Q ss_pred CCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEe
Q 004141 183 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
............+........+.+ ...+++.....|.+||+.+++..... ......+..+.| ||+. |+..+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~ 256 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRR----VVSGA 256 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSC----EEEEE
T ss_pred CCcCcEEEEECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCE----EEEEc
Confidence 211111111111222222233332 23555666789999999988765441 223334556666 7887 77665
Q ss_pred ecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCC
Q 004141 263 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVD 341 (771)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~ 341 (771)
.+..|.++|+ .+++ ...+..+...+....| ||+.|+..+.+.
T Consensus 257 ---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~--- 299 (445)
T 2ovr_B 257 ---------------YDFMVKVWDP-----------------ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT--- 299 (445)
T ss_dssp ---------------TTSCEEEEEG-----------------GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS---
T ss_pred ---------------CCCEEEEEEC-----------------CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC---
Confidence 2347888887 4443 3455555666777777 889887776553
Q ss_pred CCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004141 342 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 342 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
.|.+||+.+++........ .....+++++++.| ++...++.. ..+|+.
T Consensus 300 --------~i~i~d~~~~~~~~~~~~~---------------------~~~v~~~~~~~~~l-~~~~~dg~i--~vwd~~ 347 (445)
T 2ovr_B 300 --------SIRVWDVETGNCIHTLTGH---------------------QSLTSGMELKDNIL-VSGNADSTV--KIWDIK 347 (445)
T ss_dssp --------CEEEEETTTCCEEEEECCC---------------------CSCEEEEEEETTEE-EEEETTSCE--EEEETT
T ss_pred --------eEEEEECCCCCEEEEEcCC---------------------cccEEEEEEeCCEE-EEEeCCCeE--EEEECC
Confidence 4889998876532110000 01112345567644 455555554 445777
Q ss_pred CCcEEEecCC-C-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004141 422 SGELLRITPA-E-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 422 tg~~~~l~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~~~ 468 (771)
+++....... . .......++.+++.++....+ ..+.+.++.++
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d----g~v~iwd~~~~ 392 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD----GTVKLWDLKTG 392 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT----SEEEEEETTTC
T ss_pred CCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC----CeEEEEECCCC
Confidence 7775544332 1 111223444466655544322 35666665443
No 461
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.00 E-value=0.00077 Score=69.09 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=101.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC----CcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEec
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ----SQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
.....+.|++++.+|+++.. ....|+.+. ++ .....++... ... .++++.+.+..|++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p----------~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp SSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEEC---CCCcEEEEECCCCCCCcccEEEEeCCCCCc----------CEEEEeecCCeEEEEEC
Confidence 34678999999988866543 234677777 33 2223333211 111 47888887877766521
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC-CCCccceEEEecCC
Q 004141 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLN 251 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg 251 (771)
....|.++++++...+.+ .. .-..+..++..|++
T Consensus 97 -------------------------------------------~~~~I~~~~~~g~~~~~~--~~~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 97 -------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVH 131 (316)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTT
T ss_pred -------------------------------------------CCCEEEEEeCCCCceEEE--EECCCCCcceEEeCCCC
Confidence 236788999988766655 22 22356788899988
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCE
Q 004141 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKF 330 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~ 330 (771)
.. |+++.+. ....|+++++ ++...+.+. .........+|+|++++
T Consensus 132 g~----ly~~d~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 132 GF----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGR 177 (316)
T ss_dssp TE----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTE
T ss_pred CE----EEEEccC-------------CCCeEEEEcC-----------------CCCCeEEEEECCCCCceEEEEeccCCE
Confidence 76 7766421 1237999997 544444442 23344667899999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
|+|..... ..|+++|+++..
T Consensus 178 lY~~D~~~----------~~I~~~d~dg~~ 197 (316)
T 1ijq_A 178 LYWVDSKL----------HSISSIDVNGGN 197 (316)
T ss_dssp EEEEETTT----------TEEEEEETTSCS
T ss_pred EEEEECCC----------CeEEEEecCCCc
Confidence 99887542 579999987543
No 462
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.98 E-value=8.9e-05 Score=80.09 Aligned_cols=185 Identities=10% Similarity=0.088 Sum_probs=103.4
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004141 104 VVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
.++++||++|+.....+ .+.+| ..++......... +. +.+++| |++.|+..+.++... .|
T Consensus 137 ~~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h~---~~------v~~l~~--~~~~l~sg~~dg~i~--vw 198 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILTGHT---GS------VLCLQY--DERVIITGSSDSTVR--VW 198 (435)
T ss_dssp EEEECCSSEEEEEESSS-----CEEEEESSSCCEEEEECCCS---SC------EEEEEC--CSSEEEEEETTSCEE--EE
T ss_pred EEEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCCC---Cc------EEEEEE--CCCEEEEEcCCCeEE--EE
Confidence 45667999998776543 34555 3333333332111 11 246666 888888877665432 23
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee----eccCCCCCCccceEEEecCCCCCccE
Q 004141 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~----~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
+............+........|.+ +..+++.....|.+||+.+++.. .+ ......+..+.| |++.
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~---- 268 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVL--VGHRAAVNVVDF--DDKY---- 268 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEE--ETTE----
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEe--cCCCCcEEEEEe--CCCE----
Confidence 3222211111111222222333432 34556666789999999887643 23 233445666666 7776
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ .+..|.++|+ .+++ ...+..+...+....| +|+.|+..+.
T Consensus 269 l~s~~---------------~dg~i~vwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~ 314 (435)
T 1p22_A 269 IVSAS---------------GDRTIKVWNT-----------------STCEFVRTLNGHKRGIACLQY--RDRLVVSGSS 314 (435)
T ss_dssp EEEEE---------------TTSEEEEEET-----------------TTCCEEEEEECCSSCEEEEEE--ETTEEEEEET
T ss_pred EEEEe---------------CCCeEEEEEC-----------------CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC
Confidence 66654 3347888898 4444 3455555556666666 5777776665
Q ss_pred CCCCCCCCccccccceeeecCCCCC
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+ ..|.+||+.+++.
T Consensus 315 d-----------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 315 D-----------NTIRLWDIECGAC 328 (435)
T ss_dssp T-----------SCEEEEETTTCCE
T ss_pred C-----------CeEEEEECCCCCE
Confidence 4 3589999887653
No 463
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.98 E-value=0.00065 Score=69.60 Aligned_cols=181 Identities=11% Similarity=0.005 Sum_probs=110.4
Q ss_pred ceEEEEEccCCce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 218 PSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|++++++++.. ..+. ...-..+..+++.+.+.. |+++-. ....|+++++
T Consensus 57 ~~I~r~~~~g~~~~~~~~-~~~l~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~--------- 108 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEK----LYWTDS--------------ETNRIEVSNL--------- 108 (318)
T ss_dssp TEEEEEETTSSSCCCEEE-EECCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CcEEEEEccCCCceEEEE-cCCCCCccEEEEEcCCCe----EEEEEC--------------CCCEEEEEEC---------
Confidence 6788999887742 1220 112224567888887776 776541 2237899997
Q ss_pred hhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 297 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.+. .........++.|++..|+|..... ...|+++++++...+.+...
T Consensus 109 --------dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~-------- 163 (318)
T 3sov_A 109 --------DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------VPKIERAGMDGSSRFIIINS-------- 163 (318)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---------CCEEEEEEcCCCCeEEEEEC--------
Confidence 555444443 3344567788999888888876432 25699999876443221100
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
.+ .....++|++++++||++-. ....|++++++++..+.+..... ..-..++.+++.+|.+-.
T Consensus 164 ------~l-----~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~-~~P~glav~~~~lywtd~--- 226 (318)
T 3sov_A 164 ------EI-----YWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSL-PHPFALTLFEDILYWTDW--- 226 (318)
T ss_dssp ------SC-----SCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCC-SCEEEEEEETTEEEEEET---
T ss_pred ------CC-----CCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCC-CCceEEEEeCCEEEEEec---
Confidence 00 01346789998888988754 44579999998766666654222 122345557788877742
Q ss_pred CCCeEEEEEeccc
Q 004141 456 DVPQVKYGYFVDK 468 (771)
Q Consensus 456 ~p~~l~~~~~~~~ 468 (771)
....|++++..++
T Consensus 227 ~~~~V~~~~~~~G 239 (318)
T 3sov_A 227 STHSILACNKYTG 239 (318)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCeEEEEECCCC
Confidence 3456887776444
No 464
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.97 E-value=0.00079 Score=67.47 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=57.6
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004141 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
.....+++||+.|+..... ..|+.+|.+ |+..-. +.. .. ........+
T Consensus 127 ~~~v~~~~~G~~lv~~~~~-----------~~v~~~d~~-G~~~w~----------~~~--~~--------~~~~~~~~~ 174 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFAT-----------SEVREIAPN-GQLLNS----------VKL--SG--------TPFSSAFLD 174 (276)
T ss_dssp CSCCEECTTSCEEEEETTT-----------TEEEEECTT-SCEEEE----------EEC--SS--------CCCEEEECT
T ss_pred ccCceECCCCCEEEEecCC-----------CEEEEECCC-CCEEEE----------EEC--CC--------CccceeEcC
Confidence 3445789999977644322 358888876 443110 000 00 122345678
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCC--C----CceeeEEeecCCEEEEEEeCCC------CCCeEEEEE
Q 004141 399 DGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAE--S----NFSWSLLTLDGDNIIAVSSSPV------DVPQVKYGY 464 (771)
Q Consensus 399 Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~--~----~~~~~~~s~dg~~l~~~~~~~~------~p~~l~~~~ 464 (771)
+|+.|+. ... ...|+.+|.++|++.. +.... + ........++|+.++..+.+.. ...+++-++
T Consensus 175 ~g~~~v~-~~~--~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~ 250 (276)
T 3no2_A 175 NGDCLVA-CGD--AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEID 250 (276)
T ss_dssp TSCEEEE-CBT--TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEEC
T ss_pred CCCEEEE-eCC--CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEEC
Confidence 8885543 332 2369999999887653 32211 1 1222344556665554443432 244566544
No 465
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.96 E-value=0.0029 Score=63.49 Aligned_cols=175 Identities=6% Similarity=-0.044 Sum_probs=95.5
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.++.....+. ......+..++++|||+ |+++.. ....|++++.
T Consensus 100 ~~i~~~d~~g~~~~~~~-~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 149 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG-ATILQHPRGVTVDNKGR-----IIVVEC--------------KVMRVIIFDQ---------- 149 (286)
T ss_dssp CEEEEECTTSCEEEEEC-TTTCSCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CEEEEECCCCcEEEEec-CccCCCceEEEEeCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 57888886555444442 22223567889999986 665541 2236888885
Q ss_pred hhhcCCCCCCcceecC--CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 298 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt--~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.....+. .........+++|||+ |++.... ...|+++|..+.....+.
T Consensus 150 -------~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~g~~~~~~~---------- 201 (286)
T 1q7f_A 150 -------NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----------AHCVKVFNYEGQYLRQIG---------- 201 (286)
T ss_dssp -------TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG----------GTEEEEEETTCCEEEEES----------
T ss_pred -------CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC----------CCEEEEEcCCCCEEEEEc----------
Confidence 433333332 2223467889999998 4444322 246889986442111110
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeeEEeecCCEEEEEEeC
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~dg~~l~~~~~~ 453 (771)
. .+.+ ..+..+++++||+ |+++.... ...|.+++.++..+..+..... ......++++|+ ++++ +.
T Consensus 202 -~--~g~~-----~~p~~i~~d~~G~-l~v~~~~~-~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~ 269 (286)
T 1q7f_A 202 -G--EGIT-----NYPIGVGINSNGE-ILIADNHN-NFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGS-VVLA-SK 269 (286)
T ss_dssp -C--TTTS-----CSEEEEEECTTCC-EEEEECSS-SCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred -c--CCcc-----CCCcEEEECCCCC-EEEEeCCC-CEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence 0 0101 1234577889996 55554322 2267777876555555543322 123456778775 5555 32
Q ss_pred CCCCCeEEEEEe
Q 004141 454 PVDVPQVKYGYF 465 (771)
Q Consensus 454 ~~~p~~l~~~~~ 465 (771)
+ .++.+.+.
T Consensus 270 -~--~~v~v~~~ 278 (286)
T 1q7f_A 270 -D--YRLYIYRY 278 (286)
T ss_dssp -T--TEEEEEEC
T ss_pred -C--CeEEEEEc
Confidence 2 45666554
No 466
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.00019 Score=69.89 Aligned_cols=178 Identities=14% Similarity=0.190 Sum_probs=106.7
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|.++|+++|++..- .+-.........+++|++ |+...|. ...++++|.
T Consensus 64 ~S~v~~vD~~Tgkv~~~--~~l~~~~FgeGit~~g~~----ly~ltw~--------------~~~v~v~D~--------- 114 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQ--IELGKRYFGEGISDWKDK----IVGLTWK--------------NGLGFVWNI--------- 114 (262)
T ss_dssp EEEEEEECTTTCCEEEE--EECCTTCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCcEEEE--EecCCccceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 36899999999987655 222223333446677887 8777653 337999998
Q ss_pred hhhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 297 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.+. .++.-.. ....+++||+.|+ .++. ..+|+++|..+.+... .+.+.
T Consensus 115 --------~t~~~~~ti~~~~---eG~glt~dg~~L~-~SdG----------s~~i~~iDp~T~~v~~-------~I~V~ 165 (262)
T 3nol_A 115 --------RNLRQVRSFNYDG---EGWGLTHNDQYLI-MSDG----------TPVLRFLDPESLTPVR-------TITVT 165 (262)
T ss_dssp --------TTCCEEEEEECSS---CCCCEEECSSCEE-ECCS----------SSEEEEECTTTCSEEE-------EEECE
T ss_pred --------ccCcEEEEEECCC---CceEEecCCCEEE-EECC----------CCeEEEEcCCCCeEEE-------EEEec
Confidence 55543 3343221 3346678998765 4432 2569999988755311 11111
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------CCceeeEEee
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------SNFSWSLLTL 442 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------~~~~~~~~s~ 442 (771)
.. ...+ ..+..+.|. || +|++. .+. ...|.+||+++|++....... ......++++
T Consensus 166 ~~--g~~~-----~~lNELe~~-~G-~lyan-~w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 166 AH--GEEL-----PELNELEWV-DG-EIFAN-VWQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp ET--TEEC-----CCEEEEEEE-TT-EEEEE-ETT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred cC--Cccc-----cccceeEEE-CC-EEEEE-Ecc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 00 0001 012235676 66 46543 333 347999999999987543221 1235578899
Q ss_pred cCCEEEEEEeCCCCCCeEEEEEec
Q 004141 443 DGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 443 dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
+++.|+.+.-.. +.+|.+.+.
T Consensus 235 ~~~~lfVTGK~W---p~~~ev~~~ 255 (262)
T 3nol_A 235 EHHRLFVTGKLW---PKVFEITLT 255 (262)
T ss_dssp TTTEEEEEETTC---SEEEEEEEE
T ss_pred CCCEEEEECCCC---CceEEEEEe
Confidence 999999888666 667776654
No 467
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.95 E-value=0.00046 Score=68.71 Aligned_cols=134 Identities=8% Similarity=-0.013 Sum_probs=73.4
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++..+....... ......+..++++|||+ |+++.. ....|++++.
T Consensus 129 ~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 178 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGN-----VYVTDT--------------DNNRVVKLEA---------- 178 (270)
T ss_dssp TEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEECCCceeEeec-cccCCCceeEEEeCCCC-----EEEEEC--------------CCCEEEEEec----------
Confidence 56778876554443331 11222567889999986 665541 1237889987
Q ss_pred hhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004141 298 ELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
.+......... ........+++|| .|++.... ...|++++..+........
T Consensus 179 -------~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~----------~~~v~~~~~~~~~~~~~~~---------- 230 (270)
T 1rwi_B 179 -------ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHN----------TNQVVKLLAGSTTSTVLPF---------- 230 (270)
T ss_dssp -------TTCCEEECCCSSCCSEEEEEECTTC-CEEEEETT----------TSCEEEECTTCSCCEECCC----------
T ss_pred -------CCCceEeecccCCCCceEEEECCCC-CEEEEECC----------CCcEEEEcCCCCcceeecc----------
Confidence 44443333222 2446678999999 45554432 2458888876533211100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004141 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
..+ ..+..+++++||+ |+++....+ .|..+++.
T Consensus 231 ----~~~-----~~p~~i~~~~~g~-l~v~~~~~~--~v~~~~~~ 263 (270)
T 1rwi_B 231 ----TGL-----NTPLAVAVDSDRT-VYVADRGND--RVVKLTSL 263 (270)
T ss_dssp ----CSC-----SCEEEEEECTTCC-EEEEEGGGT--EEEEECCC
T ss_pred ----CCC-----CCceeEEECCCCC-EEEEECCCC--EEEEEcCC
Confidence 000 0234567888986 766654444 34444443
No 468
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.91 E-value=0.001 Score=70.64 Aligned_cols=162 Identities=10% Similarity=0.099 Sum_probs=102.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
.....++|++.+.+|.++.. ....|+.+...+ ....++...... ..++++.+.++.|++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~---------p~glavD~~~~~lY~~d~- 178 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQA---------PDGLAVDWIHSNIYWTDS- 178 (400)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEEC------CCCEEEECSSCSC---------EEEEEEETTTTEEEEEET-
T ss_pred CcceEEeeeeccCceEEEec---CCCeEEEEEcccCCCCCcceEEEeCCCCC---------cccEEEEecCCceEEEEC-
Confidence 45678899998888866533 234577666322 223333211111 147778887777766521
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-CCccceEEEecCCC
Q 004141 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNE 252 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-~~~~~~~~wspDg~ 252 (771)
....|.++++++...+.+ ... -..+..++..|.+.
T Consensus 179 ------------------------------------------~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 179 ------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp ------------------------------------------TTTEEEEECTTTCSEEEE--EECSSCCEEEEEEETTTT
T ss_pred ------------------------------------------CCCeEEEEeCCCCceEEE--EeCCCCCcceEEEecccC
Confidence 235789999988876666 332 23467788999877
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEE
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l 331 (771)
. |+++-+. ....|+++++ ++...+.+. .........+++|++++|
T Consensus 215 ~----ly~td~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 215 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp E----EEEEECS-------------SSCCEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred e----EEEEeCC-------------CCCEEEEEeC-----------------CCCccEEEEECCCCceEEEEEEeCCCEE
Confidence 6 7766432 1237999998 555544443 333456788999999999
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+|.... ...|+++|+++...
T Consensus 261 Y~aD~~----------~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 261 YWVDSK----------LHSISSIDVNGGNR 280 (400)
T ss_dssp EEEETT----------TTEEEEEETTSCCC
T ss_pred EEEECC----------CCEEEEEeCCCCcc
Confidence 998754 25799999876443
No 469
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.88 E-value=7.5e-05 Score=85.52 Aligned_cols=180 Identities=8% Similarity=-0.037 Sum_probs=105.4
Q ss_pred ceEEEEEccC----CceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004141 218 PSLFVININS----GEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 218 ~~l~v~d~~~----~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
..|+++++++ .....+ ... -..+..+++.+.+.. |+++-. ....|+++++
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~----LY~tD~--------------~~~~I~v~d~----- 482 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT----- 482 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSB----CEECCT--------------TTSCEEEEBS-----
T ss_pred CeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCc----EEEEec--------------cCCeEEEEec-----
Confidence 5678888875 333333 222 123556777766666 666431 2237899987
Q ss_pred hhhhhhhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeE
Q 004141 293 EASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 371 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 371 (771)
++...+.+... .......+++|++.+|+|..... ...|+++++++...+.+...
T Consensus 483 ------------dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~l~~~---- 537 (699)
T 1n7d_A 483 ------------KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE---- 537 (699)
T ss_dssp ------------SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---------SCCEEBCCSSSCCCCEESCS----
T ss_pred ------------CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---------CCeEEEEeCCCCCeeEEEeC----
Confidence 55555554432 34467789999988888766321 24688888765433221110
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEE
Q 004141 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~dg~~l~~~ 450 (771)
... ....++|++++++||++.. ....|+++++++...+.+..... ...-..++.+++.||++
T Consensus 538 --------~l~-------~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywt 600 (699)
T 1n7d_A 538 --------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 600 (699)
T ss_dssp --------SCS-------SCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEE
T ss_pred --------CCC-------CccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEE
Confidence 001 2457889999888988753 34578899997766666654221 11122455677777766
Q ss_pred EeCCCCCCeEEEEEecc
Q 004141 451 SSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 451 ~~~~~~p~~l~~~~~~~ 467 (771)
.. ...+|++++..+
T Consensus 601 d~---~~~~V~~~d~~~ 614 (699)
T 1n7d_A 601 DI---INEAIFSANRLT 614 (699)
T ss_dssp CS---TTTCEEEEETTT
T ss_pred eC---CCCeEEEEEccC
Confidence 52 335677776533
No 470
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.0024 Score=73.49 Aligned_cols=182 Identities=8% Similarity=-0.045 Sum_probs=110.0
Q ss_pred ceEEEEEccCC----ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004141 218 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~----~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+++++++. ..+.+. ...-..+..+++.+.++. |+++-. ....|+++++
T Consensus 446 ~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~----LY~tD~--------------~~~~I~v~~l------ 500 (791)
T 3m0c_C 446 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 500 (791)
T ss_dssp TEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET------
T ss_pred eeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCc----EEEEec--------------CCCeEEEEeC------
Confidence 57888888763 333331 112335667888888886 777642 2337999998
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEE
Q 004141 294 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 372 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 372 (771)
++...+.|.. ........++.|.+.+|+|+.... ..+|+++++++...+.+...
T Consensus 501 -----------dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---------~~~I~~~~~dG~~~~~lv~~----- 555 (791)
T 3m0c_C 501 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 555 (791)
T ss_dssp -----------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCCEEEEECS-----
T ss_pred -----------CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---------CCeEEEEecCCCceEEEEeC-----
Confidence 6555555543 334577889999988898887432 24699999876443221110
Q ss_pred ecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEEE
Q 004141 373 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 373 ~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~dg~~l~~~~ 451 (771)
.+ ..+..+++.+++++||++- .....|+++++++...+.+..... ...-..++.+++.||++-
T Consensus 556 ---------~l-----~~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 556 ---------NI-----QWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp ---------SC-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred ---------CC-----CCceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 00 0123566777788888874 344579999998877776654322 122345667788887765
Q ss_pred eCCCCCCeEEEEEeccc
Q 004141 452 SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 452 ~~~~~p~~l~~~~~~~~ 468 (771)
. ....|++++..++
T Consensus 620 ~---~~~~I~~~dk~tG 633 (791)
T 3m0c_C 620 I---INEAIFSANRLTG 633 (791)
T ss_dssp T---TTTEEEEEETTTC
T ss_pred C---CCCEEEEEeCCCC
Confidence 3 3356777764444
No 471
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.79 E-value=0.0002 Score=81.94 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=87.8
Q ss_pred CceEEEEEccCCceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhh
Q 004141 217 QPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 295 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 295 (771)
...|+++++++...+.+ ... -.....+++.|++.. |+++.+. ....|+++++
T Consensus 474 ~~~I~v~d~dg~~~~~l--~~~~~~~P~giavDp~~g~----ly~td~~-------------~~~~I~~~~~-------- 526 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTL--FREQGSKPRAIVVDPVHGF----MYWTDWG-------------TPAKIKKGGL-------- 526 (699)
T ss_dssp TSCEEEEBSSSCCEEEE--CCCSSCCCCCEECCSSSSC----CEECCCS-------------SSCCEEBCCS--------
T ss_pred CCeEEEEecCCCceEEE--EeCCCCCcceEEEccCCCc----EEEcccC-------------CCCeEEEEeC--------
Confidence 36789999988877666 333 235677899998887 7766421 1237888887
Q ss_pred hhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004141 296 ELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 296 ~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
++...+.+. ........++|+|++++|+|+... ...|+++++.+...+.+...
T Consensus 527 ---------dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~----------~~~I~~~d~dG~~~~~~~~~------- 580 (699)
T 1n7d_A 527 ---------NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK----------LHSISSIDVNGGNRKTILED------- 580 (699)
T ss_dssp ---------SSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT----------TTEEEEECSSSSCCEEECCC-------
T ss_pred ---------CCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC----------CCeEEEEccCCCceEEEEec-------
Confidence 444443332 333346678999999999888754 25699999875433211110
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004141 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
...++ ....+++ |+..||++. .....|++++..+|+.....
T Consensus 581 -----~~~~~-----~P~glav--d~~~lywtd--~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 581 -----EKRLA-----HPFSLAV--FEDKVFWTD--IINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp -----SSSCS-----SCCCCEE--ETTEEEEEC--STTTCEEEEETTTEEEEECC
T ss_pred -----CCcCC-----CceEeEE--ECCEEEEEe--CCCCeEEEEEccCCCceEEe
Confidence 00010 1123333 555677665 23346788887777655443
No 472
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.78 E-value=0.0037 Score=70.30 Aligned_cols=163 Identities=10% Similarity=0.040 Sum_probs=108.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.......|.+++.+|.++ +. ....|+.+. +++....++...... ..++++.+.++.|++.-.
T Consensus 37 ~~~~~l~~d~~~~~lywt-D~--~~~~I~r~~~~g~~~~~v~~~g~~~---------P~GlAvD~~~~~LY~tD~----- 99 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWT-DI--SLKTISRAFMNGSALEHVVEFGLDY---------PEGMAVDWLGKNLYWADT----- 99 (628)
T ss_dssp SCEEEEEEETTTTEEEEE-ET--TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEEET-----
T ss_pred CceEEEEEECCCCEEEEE-EC--CCCeEEEEECCCCCcEEEEeCCCCC---------cceEEEEeCCCEEEEEEC-----
Confidence 346678999998888655 33 234677777 444444444432111 147888888888876521
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|.++++++...+.+. ...-..+..++..|....
T Consensus 100 --------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~iavdp~~G~---- 136 (628)
T 4a0p_A 100 --------------------------------------GTNRIEVSKLDGQHRQVLV-WKDLDSPRALALDPAEGF---- 136 (628)
T ss_dssp --------------------------------------TTTEEEEEETTSTTCEEEE-CSSCCCEEEEEEETTTTE----
T ss_pred --------------------------------------CCCEEEEEecCCCcEEEEE-eCCCCCcccEEEccCCCe----
Confidence 2368999999888766662 122235678889987665
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|+++-|. ....|+++++ ++...+.+..........++++++++|+|....
T Consensus 137 lY~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 137 MYWTEWG-------------GKPKIDRAAM-----------------DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEEeCCC-------------CCCEEEEEeC-----------------CCCceEEEECCCCCcceEEEccccCEEEEEECC
Confidence 7766532 1348999998 666666655555557788999999999988754
Q ss_pred CCCCCCCccccccceeeecCCCCC
Q 004141 338 SSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
. ..|+++|+++...
T Consensus 187 ~----------~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 187 T----------NLIESSNMLGLNR 200 (628)
T ss_dssp T----------TEEEEEETTSCSC
T ss_pred C----------CEEEEEcCCCCce
Confidence 3 5699999876443
No 473
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.77 E-value=0.00087 Score=72.22 Aligned_cols=211 Identities=9% Similarity=0.001 Sum_probs=110.2
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccc
Q 004141 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 147 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 147 (771)
..+.+.++++... .....+... ...+...+| ||+.|+..+..+ .+.+| ..++........ .+
T Consensus 151 ~dg~i~iwd~~~~-~~~~~~~~h-----~~~v~~l~~--~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~h---~~ 214 (435)
T 1p22_A 151 RDNTIKIWDKNTL-ECKRILTGH-----TGSVLCLQY--DERVIITGSSDS-----TVRVWDVNTGEMLNTLIHH---CE 214 (435)
T ss_dssp SSSCEEEEESSSC-CEEEEECCC-----SSCEEEEEC--CSSEEEEEETTS-----CEEEEESSSCCEEEEECCC---CS
T ss_pred CCCeEEEEeCCCC-eEEEEEcCC-----CCcEEEEEE--CCCEEEEEcCCC-----eEEEEECCCCcEEEEEcCC---CC
Confidence 4456777776332 111222211 234555666 888887765443 34455 333333322211 11
Q ss_pred cccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC---CCCccCCCCCCcccccCCcCcccCCccCceEEEEE
Q 004141 148 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 224 (771)
Q Consensus 148 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d 224 (771)
.+..+.|++ ..|+..+.+.... .|+....... .....+......+.+ +....+++..+..|.+||
T Consensus 215 ------~v~~l~~~~--~~l~s~s~dg~i~--vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 215 ------AVLHLRFNN--GMMVTCSKDRSIA--VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp ------CEEEEECCT--TEEEEEETTSCEE--EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred ------cEEEEEEcC--CEEEEeeCCCcEE--EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 125777764 4666666554322 2322111111 011112222222333 333445566678999999
Q ss_pred ccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004141 225 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
+.+++..... ......+..+.| +++. |+..+ .+..|.++|+
T Consensus 283 ~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~g~---------------~dg~i~iwd~----------------- 323 (435)
T 1p22_A 283 TSTCEFVRTL-NGHKRGIACLQY--RDRL----VVSGS---------------SDNTIRLWDI----------------- 323 (435)
T ss_dssp TTTCCEEEEE-ECCSSCEEEEEE--ETTE----EEEEE---------------TTSCEEEEET-----------------
T ss_pred CCcCcEEEEE-cCCCCcEEEEEe--CCCE----EEEEe---------------CCCeEEEEEC-----------------
Confidence 9988765441 223334555566 5554 55544 3347888998
Q ss_pred CCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 305 EDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 305 ~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.+++ ...+..+...+....| ||+.|+..+.+. .|.+||+.++.
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg-----------~i~vwd~~~~~ 367 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-----------KIKVWDLVAAL 367 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS-----------CEEEEEHHHHT
T ss_pred CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCC-----------cEEEEECCCCC
Confidence 5444 4556656666777777 888887776553 48888886554
No 474
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.68 E-value=0.0017 Score=63.21 Aligned_cols=200 Identities=11% Similarity=0.012 Sum_probs=112.8
Q ss_pred eEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004141 102 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 102 ~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
+...|+ || + +|.+....+...+..++ ..++..+.+.++.... +...+++|++|+.+..
T Consensus 46 qGL~~~-~~-~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F----------geGit~~g~~ly~ltw-------- 104 (262)
T 3nol_A 46 EGFFYR-NG-Y-FYESTGLNGRSSIRKVDIESGKTLQQIELGKRYF----------GEGISDWKDKIVGLTW-------- 104 (262)
T ss_dssp EEEEEE-TT-E-EEEEEEETTEEEEEEECTTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES--------
T ss_pred ceEEEE-CC-E-EEEECCCCCCceEEEEECCCCcEEEEEecCCccc----------eeEEEEeCCEEEEEEe--------
Confidence 456777 55 4 46666544566788888 6777766666644331 3335567887766522
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004141 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....++++|.++.++..- .+... .....++||+. |+.
T Consensus 105 -----------------------------------~~~~v~v~D~~t~~~~~t--i~~~~--eG~glt~dg~~----L~~ 141 (262)
T 3nol_A 105 -----------------------------------KNGLGFVWNIRNLRQVRS--FNYDG--EGWGLTHNDQY----LIM 141 (262)
T ss_dssp -----------------------------------SSSEEEEEETTTCCEEEE--EECSS--CCCCEEECSSC----EEE
T ss_pred -----------------------------------eCCEEEEEECccCcEEEE--EECCC--CceEEecCCCE----EEE
Confidence 237899999998876543 22221 23456789986 554
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC--CCccc---cceeecCCCCEEEEE
Q 004141 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISSA---FFPRFSPDGKFLVFL 334 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~---~~p~~SpDG~~l~f~ 334 (771)
++ ....|+.+|. ++.+. .++.- ..... ....|. ||+ |+ .
T Consensus 142 -Sd--------------Gs~~i~~iDp-----------------~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly-a 186 (262)
T 3nol_A 142 -SD--------------GTPVLRFLDP-----------------ESLTPVRTITVTAHGEELPELNELEWV-DGE-IF-A 186 (262)
T ss_dssp -CC--------------SSSEEEEECT-----------------TTCSEEEEEECEETTEECCCEEEEEEE-TTE-EE-E
T ss_pred -EC--------------CCCeEEEEcC-----------------CCCeEEEEEEeccCCccccccceeEEE-CCE-EE-E
Confidence 42 2347999997 55432 23222 11121 234565 774 44 4
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCC--CCcccccCCCCCCccccCCCEEEEEeeeCCe
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 412 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~ 412 (771)
..-. ...|.++|.++++... .+++-...... ..+ ....+..++|+|++++||++. ..+
T Consensus 187 n~w~---------~~~I~vIDp~tG~V~~-------~Id~~~L~~~~~~~~~--~~~vlNGIA~dp~~~~lfVTG--K~W 246 (262)
T 3nol_A 187 NVWQ---------TNKIVRIDPETGKVTG-------IIDLNGILAEAGPLPS--PIDVLNGIAWDKEHHRLFVTG--KLW 246 (262)
T ss_dssp EETT---------SSEEEEECTTTCBEEE-------EEECTTGGGGSCSCCS--SCCCEEEEEEETTTTEEEEEE--TTC
T ss_pred EEcc---------CCeEEEEECCCCcEEE-------EEECCcCccccccccC--cCCceEEEEEcCCCCEEEEEC--CCC
Confidence 3322 3579999998887521 11110000000 000 001245789999999887764 466
Q ss_pred eEEEEEEC
Q 004141 413 QVIISVNV 420 (771)
Q Consensus 413 ~~l~~~d~ 420 (771)
..||.|.+
T Consensus 247 p~~~ev~~ 254 (262)
T 3nol_A 247 PKVFEITL 254 (262)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 78887764
No 475
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.67 E-value=0.0036 Score=72.06 Aligned_cols=162 Identities=9% Similarity=0.097 Sum_probs=102.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
.....++|.+.+.+|+++ +.. ...|+.+...+ ....++...... ..++++.+.++.|+++-.
T Consensus 424 ~~~~gl~~d~~~~~lY~s-D~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~---------P~GLAvD~~~~~LY~tD~- 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWS-DLS--QRMICSTQLDRAHGVSSYDTVISRDIQA---------PDGLAVDWIHSNIYWTDS- 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEE-ETT--TTEEEEEEC--------CEEEECSSCSC---------CCEEEEETTTTEEEEEET-
T ss_pred CceEEEeecccCCeeEEe-ecc--ceeEEEEeccCCCCCcceeEEEecCCCC---------cceeeeeecCCcEEEEec-
Confidence 345678899888877555 332 34577666332 223333311111 147888888888776521
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-CCccceEEEecCCC
Q 004141 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNE 252 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-~~~~~~~~wspDg~ 252 (771)
....|+++++++...+.+ ... -..+..++..|.+.
T Consensus 491 ------------------------------------------~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 491 ------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp ------------------------------------------TTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTTT
T ss_pred ------------------------------------------CCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecCCC
Confidence 236899999998877666 322 23467889999877
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEE
Q 004141 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l 331 (771)
. |+++-|. ....|+++++ ++...+.|.. ........++++++++|
T Consensus 527 ~----LYwtD~g-------------~~~~I~~~~~-----------------dG~~~~~lv~~~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 527 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 572 (791)
T ss_dssp E----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred C----EEEecCC-------------CCCeEEEEec-----------------CCCceEEEEeCCCCCceEEEEecCCCeE
Confidence 6 7776532 1237999998 5555544433 33456778999999999
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCC
Q 004141 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
||+... ...|+++++++...
T Consensus 573 YwaD~~----------~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 573 YWVDSK----------LHSISSIDVNGGNR 592 (791)
T ss_dssp EEEETT----------TTEEEEEETTSCSC
T ss_pred EEEeCC----------CCcEEEEecCCCce
Confidence 988644 25799999876544
No 476
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.66 E-value=0.00028 Score=68.41 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=81.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHH-----------HH------HHCCcEEEEECCCCCCC
Q 004141 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLA-----------FL------SSVGYSLLIVNYRGSLG 579 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~-----------~l------a~~G~~Vv~~d~rG~~~ 579 (771)
.+..+..|++.... .....|+|++++|||+.+... +..... .+ -.+-..++.+|.+-..|
T Consensus 30 ~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~-~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtG 106 (255)
T 1whs_A 30 AGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVA-YGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVG 106 (255)
T ss_dssp TTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTT-THHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTST
T ss_pred CCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHH-HHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCc
Confidence 46678888886542 345689999999999875432 011000 00 01237899999653334
Q ss_pred CChhhhhcCC-CCccccchhhHHHHHHHHHH-cCCCCCCeEEEEEcChhHHHHHHHHhhC------CCceeEEEecCCcc
Q 004141 580 FGEEALQSLP-GKVGSQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLC 651 (771)
Q Consensus 580 ~g~~~~~~~~-~~~~~~~~~D~~~~i~~l~~-~~~~d~~ri~l~G~S~GG~~a~~~a~~~------p~~~~~~v~~~p~~ 651 (771)
+......... ..-.....+|+..+++...+ .+.....++.|+|.|+||..+..+|..- .-.++++++.+|++
T Consensus 107 fSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~ 186 (255)
T 1whs_A 107 FSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLI 186 (255)
T ss_dssp TCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECC
T ss_pred cCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCcc
Confidence 4332111000 01112235666666654444 3345567899999999999988777521 23579999999998
Q ss_pred chh
Q 004141 652 NLA 654 (771)
Q Consensus 652 ~~~ 654 (771)
+..
T Consensus 187 d~~ 189 (255)
T 1whs_A 187 DDY 189 (255)
T ss_dssp BHH
T ss_pred CHH
Confidence 764
No 477
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.65 E-value=0.0041 Score=69.90 Aligned_cols=205 Identities=10% Similarity=0.038 Sum_probs=122.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcc--eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
.....+.|++.+.+|.++ +.. ...|+.+...+.. ..++...... ..++++.+.++.|++...
T Consensus 40 ~~~~~ld~~~~~~~ly~s-D~~--~~~I~r~~~~g~~~~~~v~~~~~~~---------P~GlAvD~~~~~ly~~d~---- 103 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWS-DVS--EEAIKRTEFNKTESVQNVVVSGLLS---------PDGLACDWLGEKLYWTDS---- 103 (619)
T ss_dssp SCEEEEEEETTTTEEEEE-ETT--TTEEEEEEC-----CEEEECSSCSC---------EEEEEEETTTTEEEEEET----
T ss_pred CceEEEEEEeCCCEEEEE-ECC--CCeEEEEEccCCCceEEEEeCCCCC---------cCeEEEEecCCEEEEEeC----
Confidence 446678999998888554 432 3457776633322 2222221111 158889998887876521
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
....|.++++++...+.+. ...-..+..++..|.+..
T Consensus 104 ---------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~Iavdp~~g~--- 140 (619)
T 3s94_A 104 ---------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF--- 140 (619)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSCCCCEEEETTTTE---
T ss_pred ---------------------------------------CCCEEEEEECCCCCEEEEE-eCCCCCCceEEEecCCCe---
Confidence 2368999999988766662 122235778899998776
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+|+-|. ....|++.++ ++...+.+. .........++++++++|+|..
T Consensus 141 -ly~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 141 -MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp -EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred -EEEeccC-------------CCCEEEEEEC-----------------CCCceEEEEeCCCCCCcEEEEEccCCEEEEEe
Confidence 7776532 1237999998 555544443 3334467789999999999886
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004141 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l 415 (771)
.. ...|+++|+++...+.+..+. +. .+..+++. +..||++. .....|
T Consensus 190 ~~----------~~~I~~~~~dG~~~~~~~~~~--------------~~-----~P~gi~~~--~~~ly~td--~~~~~V 236 (619)
T 3s94_A 190 AK----------LNFIHKSNLDGTNRQAVVKGS--------------LP-----HPFALTLF--EDILYWTD--WSTHSI 236 (619)
T ss_dssp TT----------TCCEEEESSSCCEEC----------------------------CCCEEES--SSEEEEEC--TTTCSE
T ss_pred CC----------CCeEEEecCCCCccEEEEeCC--------------CC-----CceEEEEe--CCEEEEec--CCCCEE
Confidence 54 256999998775543332110 00 12334443 34676653 234568
Q ss_pred EEEECCCCcEE
Q 004141 416 ISVNVSSGELL 426 (771)
Q Consensus 416 ~~~d~~tg~~~ 426 (771)
+++|..+|+..
T Consensus 237 ~~~d~~tg~~~ 247 (619)
T 3s94_A 237 LACNKYTGEGL 247 (619)
T ss_dssp EEEESSSCCCC
T ss_pred EEEECCCCccc
Confidence 89998877643
No 478
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.64 E-value=0.0041 Score=63.75 Aligned_cols=194 Identities=11% Similarity=-0.047 Sum_probs=99.4
Q ss_pred eEEEEEccCCceeeccCCCC---CCccceEEEec-CCCCCccEEEEEeecCc-ceeee--eeeeccCCceeEEEeccccc
Q 004141 219 SLFVININSGEVQAVKGIPK---SLSVGQVVWAP-LNEGLHQYLVFVGWSSE-TRKLG--IKYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 219 ~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~-~~~~g--~~~~~~~~~~l~~~d~~~~~ 291 (771)
.|+++|.++++.+.+..... -.....+++.| ||+ |+++..... ..+.. ..........|+++|.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---- 172 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---- 172 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET----
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-----EEEECCcccccccccceehcccCCCceEEEEeC----
Confidence 47778877666555421111 11355688999 885 777642210 00000 0000012347999997
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeE
Q 004141 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 371 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 371 (771)
.+++.+.+..........+|+|||+.|++.... ..+|+++++.+.... ....+
T Consensus 173 -------------~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----------~~~I~~~~~~~~~~~----~~~~~ 225 (322)
T 2fp8_A 173 -------------STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----------SHQIVKYWLEGPKKG----TAEVL 225 (322)
T ss_dssp -------------TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----------GTEEEEEESSSTTTT----CEEEE
T ss_pred -------------CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----------CCeEEEEECCCCcCC----ccceE
Confidence 556554443322334568999999988776543 256999998753211 11011
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeee--------CCeeEEEEEECCCCcEEEecCCCCC-ce-eeEEe
Q 004141 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--------GSSQVIISVNVSSGELLRITPAESN-FS-WSLLT 441 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~--------~~~~~l~~~d~~tg~~~~l~~~~~~-~~-~~~~s 441 (771)
.. .+| ...++..+||+ |+++... .....|++++.++..+..+....+. .. ...+.
T Consensus 226 ~~---------~~g-----P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 226 VK---------IPN-----PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EE---------CSS-----EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEE
T ss_pred Ee---------CCC-----CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEE
Confidence 10 111 23456788887 6555443 1245799999864444455433221 11 11222
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 442 LDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 442 ~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
.+++.|++... ....|.++++.
T Consensus 291 ~~~g~L~v~~~---~~~~i~~~~~~ 312 (322)
T 2fp8_A 291 EHDGLLYIGTL---FHGSVGILVYD 312 (322)
T ss_dssp EETTEEEEECS---SCSEEEEEEC-
T ss_pred EeCCEEEEeec---CCCceEEEecc
Confidence 34667776542 23556666654
No 479
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.64 E-value=0.012 Score=66.11 Aligned_cols=178 Identities=10% Similarity=-0.022 Sum_probs=113.1
Q ss_pred ceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|++++++++..+.+ .... ..+..++..+.++. |+++-. ....|.++++
T Consensus 59 ~~I~r~~~~g~~~~~v--~~~g~~~P~GlAvD~~~~~----LY~tD~--------------~~~~I~v~~~--------- 109 (628)
T 4a0p_A 59 KTISRAFMNGSALEHV--VEFGLDYPEGMAVDWLGKN----LYWADT--------------GTNRIEVSKL--------- 109 (628)
T ss_dssp TEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CeEEEEECCCCCcEEE--EeCCCCCcceEEEEeCCCE----EEEEEC--------------CCCEEEEEec---------
Confidence 6889999988776665 2322 35677888888887 777642 2247999998
Q ss_pred hhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004141 297 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.|. .........++.|....|+|..... ..+|+++++++...+.+...
T Consensus 110 --------dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---------~~~I~r~~~dG~~~~~l~~~-------- 164 (628)
T 4a0p_A 110 --------DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---------KPKIDRAAMDGSERTTLVPN-------- 164 (628)
T ss_dssp --------TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC---------CCEEEEEeCCCCceEEEECC--------
Confidence 555544443 3344567889999888888876432 35799999877554322110
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004141 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~~~~~ 455 (771)
.. .+..+++.+++++||++.. ....|++++++++..+.+..... .-..++.+++.||++-.
T Consensus 165 -----~~-------~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~~~ly~tD~--- 225 (628)
T 4a0p_A 165 -----VG-------RANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLP--HPFGLTQYQDYIYWTDW--- 225 (628)
T ss_dssp -----CS-------SEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCS--CEEEEEEETTEEEEEET---
T ss_pred -----CC-------CcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCC--CceEEEEECCEEEEecC---
Confidence 01 2345678888888988754 34578999998766654432221 22345666788877652
Q ss_pred CCCeEEEEEeccc
Q 004141 456 DVPQVKYGYFVDK 468 (771)
Q Consensus 456 ~p~~l~~~~~~~~ 468 (771)
....|++++..++
T Consensus 226 ~~~~I~~~dk~tg 238 (628)
T 4a0p_A 226 SRRSIERANKTSG 238 (628)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 3456777775444
No 480
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.63 E-value=0.0033 Score=60.52 Aligned_cols=179 Identities=13% Similarity=0.195 Sum_probs=104.4
Q ss_pred cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhh
Q 004141 216 RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 295 (771)
Q Consensus 216 ~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 295 (771)
+...|.++|+++|++..-...+. .......++++++ |+...|. ...++++|.
T Consensus 41 g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~----ly~ltw~--------------~~~v~v~D~-------- 92 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDR----LIQLTWR--------------NHEGFVYDL-------- 92 (243)
T ss_dssp TSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEESS--------------SSEEEEEET--------
T ss_pred CCceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCE----EEEEEee--------------CCEEEEEEC--------
Confidence 34789999999998766521232 2333445667777 7777653 337999997
Q ss_pred hhhhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004141 296 ELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 296 ~~~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
++.+. .++.... ....+++||+.|+ .++. ..+|+++|..+.+... .+.+
T Consensus 93 ---------~tl~~~~ti~~~~---~Gwglt~dg~~L~-vSdg----------s~~l~~iDp~t~~~~~-------~I~V 142 (243)
T 3mbr_X 93 ---------ATLTPRARFRYPG---EGWALTSDDSHLY-MSDG----------TAVIRKLDPDTLQQVG-------SIKV 142 (243)
T ss_dssp ---------TTTEEEEEEECSS---CCCEEEECSSCEE-EECS----------SSEEEEECTTTCCEEE-------EEEC
T ss_pred ---------CcCcEEEEEeCCC---CceEEeeCCCEEE-EECC----------CCeEEEEeCCCCeEEE-------EEEE
Confidence 55443 3333221 2345678998765 4433 2569999987755311 1111
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-------------C-CCceeeEE
Q 004141 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------E-SNFSWSLL 440 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-------------~-~~~~~~~~ 440 (771)
-. ..++ ...+..+.|. ||+ |+ ...+. ...|.+||+++|++.....- . ......++
T Consensus 143 ~~----~g~~---~~~lNeLe~~-~G~-ly-anvw~-s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 143 TA----GGRP---LDNLNELEWV-NGE-LL-ANVWL-TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp EE----TTEE---CCCEEEEEEE-TTE-EE-EEETT-TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred cc----CCcc---cccceeeEEe-CCE-EE-EEECC-CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE
Confidence 10 1111 0012234454 664 65 33333 34899999999998754321 1 12355788
Q ss_pred eecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 441 TLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 441 s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
+++++.|+.+.-.. +.+|.+.+.
T Consensus 212 d~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 212 DAEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp ETTTTEEEEEETTC---SEEEEEEEC
T ss_pred cCCCCEEEEECCCC---CcEEEEEEe
Confidence 88899888877555 667776664
No 481
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.60 E-value=0.0019 Score=64.82 Aligned_cols=94 Identities=9% Similarity=0.036 Sum_probs=54.9
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.++.....+........+..++++|||+ |+++.. ....|++++.
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 192 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-----IFISDN--------------RAHCVKVFNY---------- 192 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-----EEEEEG--------------GGTEEEEEET----------
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 57888887665554442111223467889999986 555431 1236888886
Q ss_pred hhhcCCCCCCcceecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004141 298 ELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
++.....+... .......+++|||+ |+...... ...|.++|.+
T Consensus 193 -------~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~---------~~~i~~~~~~ 237 (286)
T 1q7f_A 193 -------EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHN---------NFNLTIFTQD 237 (286)
T ss_dssp -------TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSS---------SCEEEEECTT
T ss_pred -------CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCC---------CEEEEEECCC
Confidence 44444444332 23466789999996 44433221 1268888854
No 482
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.59 E-value=0.00031 Score=75.92 Aligned_cols=112 Identities=18% Similarity=0.122 Sum_probs=75.4
Q ss_pred CCcEEEEEcCCCCCCCC--CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh---c-----CCCCccccchhhHHHHHH
Q 004141 536 CDPLIVVLHGGPHSVSL--SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ---S-----LPGKVGSQDVNDVLTAID 605 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~--~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~---~-----~~~~~~~~~~~D~~~~i~ 605 (771)
..|++|++-| -+.... ..-........+.|-.+|..++|- ||.+..- . +..-...+.++|+...++
T Consensus 42 ~gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~ 117 (472)
T 4ebb_A 42 EGPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAELLR 117 (472)
T ss_dssp TCCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHH
T ss_pred CCcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHHHHH
Confidence 3687777744 222100 000112334456799999999997 6665431 0 111122345788888888
Q ss_pred HHHHcCCCCCCeEEEEEcChhHHHHHHHHhhCCCceeEEEecCCcc
Q 004141 606 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 606 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~ 651 (771)
++.........+++++|.|+||.+|+++-.++|+.+.++++.++++
T Consensus 118 ~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 118 ALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 8887655556789999999999999999999999999888777643
No 483
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.58 E-value=0.0073 Score=59.00 Aligned_cols=210 Identities=12% Similarity=0.142 Sum_probs=117.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...+..+|.|++++|+.+.+. ...++.++..++..+.+.+... ..+.++++.++|+ ++.+.+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--------~D~EGIa~~~~g~-~~vs~E~----- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--------KDLETIEYIGDNQ-FVISDER----- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--------SSEEEEEECSTTE-EEEEETT-----
T ss_pred cCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--------CChHHeEEeCCCE-EEEEECC-----
Confidence 457889999999988777664 4679999955666665554321 1126888998885 4333332
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce----eecc----CCCCCCccceEEEecC
Q 004141 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVK----GIPKSLSVGQVVWAPL 250 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~----~~l~----~~~~~~~~~~~~wspD 250 (771)
...|+++++..... .... ..+.+.....++|+|+
T Consensus 90 --------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~ 131 (255)
T 3qqz_A 90 --------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ 131 (255)
T ss_dssp --------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT
T ss_pred --------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC
Confidence 24566666543321 1111 1234556789999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec-------CCCCcccccee
Q 004141 251 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-------TESISSAFFPR 323 (771)
Q Consensus 251 g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-------t~~~~~~~~p~ 323 (771)
+++ |+.+. +..+ ..||.++- .. .+...+.+ ........+.+
T Consensus 132 ~~~----L~va~-E~~p------------~~i~~~~g--~~-------------~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 132 DHT----FWFFK-EKNP------------IEVYKVNG--LL-------------SSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTE----EEEEE-ESSS------------EEEEEEES--TT-------------CSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCE----EEEEE-CcCC------------ceEEEEcc--cc-------------cCCceeeecchhhccccccCCceeEE
Confidence 987 77654 3222 25677661 00 11111111 01122356788
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc--cCCCCCcccccCCCCCCccccCCC
Q 004141 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~g~~~~~~~~~~~s~Dg~ 401 (771)
+.|.-..|+.++... ..|..+|.++. .+ ....+... .....++ ....+++.++|+
T Consensus 180 ~dp~tg~lliLS~~s----------~~L~~~d~~g~-~~-------~~~~L~~g~~~l~~~~~-----qpEGia~d~~G~ 236 (255)
T 3qqz_A 180 FNQQKNTLLVLSHES----------RALQEVTLVGE-VI-------GEMSLTKGSRGLSHNIK-----QAEGVAMDASGN 236 (255)
T ss_dssp EETTTTEEEEEETTT----------TEEEEECTTCC-EE-------EEEECSTTGGGCSSCCC-----SEEEEEECTTCC
T ss_pred EcCCCCeEEEEECCC----------CeEEEEcCCCC-EE-------EEEEcCCccCCcccccC-----CCCeeEECCCCC
Confidence 889888888888764 46888887653 21 01111100 0011122 234678999996
Q ss_pred EEEEEeeeCCeeEEEEEECCC
Q 004141 402 TMLLSSIWGSSQVIISVNVSS 422 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~t 422 (771)
||+++. . ..+|++...+
T Consensus 237 -lyIvsE-~--n~~y~f~~~~ 253 (255)
T 3qqz_A 237 -IYIVSE-P--NRFYRFTPQS 253 (255)
T ss_dssp -EEEEET-T--TEEEEEEC--
T ss_pred -EEEEcC-C--ceEEEEEecC
Confidence 766643 2 2678776543
No 484
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.57 E-value=0.017 Score=56.36 Aligned_cols=202 Identities=10% Similarity=0.151 Sum_probs=112.0
Q ss_pred cceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC
Q 004141 156 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 235 (771)
Q Consensus 156 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~ 235 (771)
++++|.||++.|+.+.+. .+.|+.+|+++...+.+.
T Consensus 30 SGla~~~~~~~L~aV~d~-------------------------------------------~~~I~~ld~~g~v~~~i~- 65 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINK-------------------------------------------PAAIVEMTTNGDLIRTIP- 65 (255)
T ss_dssp EEEEEETTTTEEEEEEET-------------------------------------------TEEEEEEETTCCEEEEEE-
T ss_pred ceeEEeCCCCEEEEEECC-------------------------------------------CCeEEEEeCCCCEEEEEe-
Confidence 799999999888877553 278999999844344442
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---cee-
Q 004141 236 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVN- 311 (771)
Q Consensus 236 ~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~- 311 (771)
..+......+++.++|. ++.+. + +...|++++++. .+. ...
T Consensus 66 l~g~~D~EGIa~~~~g~-----~~vs~-E-------------~~~~l~~~~v~~----------------~~~i~~~~~~ 110 (255)
T 3qqz_A 66 LDFVKDLETIEYIGDNQ-----FVISD-E-------------RDYAIYVISLTP----------------NSEVKILKKI 110 (255)
T ss_dssp CSSCSSEEEEEECSTTE-----EEEEE-T-------------TTTEEEEEEECT----------------TCCEEEEEEE
T ss_pred cCCCCChHHeEEeCCCE-----EEEEE-C-------------CCCcEEEEEcCC----------------CCeeeeeeee
Confidence 23334566788887764 43332 2 223577666531 111 011
Q ss_pred ---c--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec-CCCCCCCCccceeeEEecccccCCCCCcc
Q 004141 312 ---L--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW-PTNGNFSSLEKIVDVIPVVQCAEGDCFPG 385 (771)
Q Consensus 312 ---l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~g 385 (771)
+ ...+......+|+|++++|+....+. ...||.++- ..+. .+ .+........ ..
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------p~~i~~~~g~~~~~--~l-----~i~~~~~~~~-~~--- 170 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------PIEVYKVNGLLSSN--EL-----HISKDKALQR-QF--- 170 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---------SEEEEEEESTTCSS--CC-----EEEECHHHHH-TC---
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcC---------CceEEEEcccccCC--ce-----eeecchhhcc-cc---
Confidence 1 12233468899999999887766543 246888871 0111 01 1110000000 00
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC---------CceeeEEeecCCEEEEEEeCCCC
Q 004141 386 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 386 ~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~ 456 (771)
....+..+++.|...+|++.+. ....|..+|.++.-+..+.-..+ ......++++|+ ||.+ +-+
T Consensus 171 -~~~d~S~l~~dp~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~-- 243 (255)
T 3qqz_A 171 -TLDDVSGAEFNQQKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEP-- 243 (255)
T ss_dssp -CSSCCCEEEEETTTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETT--
T ss_pred -ccCCceeEEEcCCCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCC--
Confidence 0113456778787777877764 33568888986543333332221 335568888886 6555 333
Q ss_pred CCeEEEEE
Q 004141 457 VPQVKYGY 464 (771)
Q Consensus 457 p~~l~~~~ 464 (771)
-.+|++.
T Consensus 244 -n~~y~f~ 250 (255)
T 3qqz_A 244 -NRFYRFT 250 (255)
T ss_dssp -TEEEEEE
T ss_pred -ceEEEEE
Confidence 3677764
No 485
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.56 E-value=0.00038 Score=74.35 Aligned_cols=126 Identities=21% Similarity=0.200 Sum_probs=76.1
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHH------------H------HHCCcEEEEECC-CCCC
Q 004141 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF------------L------SSVGYSLLIVNY-RGSL 578 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~------------l------a~~G~~Vv~~d~-rG~~ 578 (771)
+..+..|++...+ .....|+|+++||||+.+.. + ..+.. + -.+-+.++.+|. +|.|
T Consensus 31 ~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~--~-g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtG 105 (452)
T 1ivy_A 31 SKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL--D-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVG 105 (452)
T ss_dssp TEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTH--H-HHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTST
T ss_pred CCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH--H-HHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCC
Confidence 5678888776542 33467999999999987431 1 11100 0 023478999996 5643
Q ss_pred CCChhhhhcCCCCccc---cchhhHHHHHH-HHHHcCCCCCCeEEEEEcChhHHHHHHHHhh----CCCceeEEEecCCc
Q 004141 579 GFGEEALQSLPGKVGS---QDVNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ----APDKFVAAAARNPL 650 (771)
Q Consensus 579 ~~g~~~~~~~~~~~~~---~~~~D~~~~i~-~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~----~p~~~~~~v~~~p~ 650 (771)
+... . ...... ...+|+..++. ++...+.....++.|+|+|+||..+..+|.. .+-.++++++.+|+
T Consensus 106 -fS~~--~--~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 106 -FSYS--D--DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp -TCEE--S--SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred -cCCc--C--CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 3321 1 111111 12444444444 4444334556889999999999966655542 34578999999998
Q ss_pred cch
Q 004141 651 CNL 653 (771)
Q Consensus 651 ~~~ 653 (771)
++.
T Consensus 181 ~d~ 183 (452)
T 1ivy_A 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCh
Confidence 864
No 486
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.54 E-value=0.0076 Score=61.96 Aligned_cols=155 Identities=9% Similarity=0.024 Sum_probs=84.3
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|+++|.+++++....+...-..+..++++|||+ |+++.. ....|++++.
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-----l~v~d~--------------~~~~v~~~~~--------- 119 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-----YWVTDV--------------ALHQVFKLDP--------- 119 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-----EEEEEC--------------CCCEEEEEeC---------
Confidence 468999999988876552212223567889999997 655541 2337888886
Q ss_pred hhhhcCCCCCC--cceecC---------CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004141 297 LELKESSSEDL--PVVNLT---------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 297 ~~~~~~~~~~~--~~~~lt---------~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
++. ....+. .........+++|++..|++..... ...|++++.+ +......
T Consensus 120 --------~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---------~~~I~~~~~~-g~~~~~~ 181 (329)
T 3fvz_A 120 --------HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---------NSRIVQFSPS-GKFVTQW 181 (329)
T ss_dssp --------TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---------CCEEEEECTT-SCEEEEE
T ss_pred --------CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---------CCeEEEEcCC-CCEEEEe
Confidence 333 233331 1122466789999444465555311 2468888843 3221100
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004141 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
..... -.......| ..+..++++||+..||++... ...|.+++.++|+....
T Consensus 182 ~~~g~----~~~~~~~~~-----~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 182 GEESS----GSSPRPGQF-----SVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp CEECC----SSSCCTTEE-----SCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEE
T ss_pred ccCCC----CCCCCCccc-----CCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEE
Confidence 00000 000000011 123467889996667766543 34677788887776544
No 487
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.53 E-value=0.014 Score=58.58 Aligned_cols=274 Identities=9% Similarity=-0.015 Sum_probs=131.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
......+++|+|+ +.+... ....++.++..+..... ...... ....++.++|||+ |++...... .-
T Consensus 15 ~~~~~i~~d~~g~-l~v~~~---~~~~v~~~d~~~~~~~~-~~~~~~-------~~~~~i~~~~~g~-l~v~~~~~~-~i 80 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQH---KANMISCINLDGKITEY-PLPTPD-------AKVMCLTISSDGE-VWFTENAAN-KI 80 (299)
T ss_dssp CCEEEEEECTTSC-EEEEET---TTTEEEEECTTCCEEEE-ECSSTT-------CCEEEEEECTTSC-EEEEETTTT-EE
T ss_pred CCccceEECCCCC-EEEEec---CCCcEEEEcCCCCeEEe-cCCccc-------CceeeEEECCCCC-EEEeCCCCC-eE
Confidence 3467788999997 333322 12346666633443322 221110 1124788889886 444332111 00
Q ss_pred CCccCCCCCCCC-CCccCCCCCCcccccCCcCcccCCc-cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004141 179 PTFSLGSTKGGS-SDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
..+... ..... .............+.++ |..++.. ....|+++|. +++...+........+..++++|||+
T Consensus 81 ~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~---- 153 (299)
T 2z2n_A 81 GRITKK-GIIKEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA---- 153 (299)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC----
T ss_pred EEECCC-CcEEEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC----
Confidence 001100 00000 00000111122334444 3444432 3467888888 55555442111223566788999985
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee--cCCCCccccceeecCCCCEEEEE
Q 004141 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN--LTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|++... ....|+++|. +++... +...........+++||+ |++.
T Consensus 154 -l~v~~~--------------~~~~i~~~~~------------------~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~ 199 (299)
T 2z2n_A 154 -LWFTEN--------------QNNAIGRITE------------------SGDITEFKIPTPASGPVGITKGNDDA-LWFV 199 (299)
T ss_dssp -EEEEET--------------TTTEEEEECT------------------TCCEEEEECSSTTCCEEEEEECTTSS-EEEE
T ss_pred -EEEEeC--------------CCCEEEEEcC------------------CCcEEEeeCCCCCCcceeEEECCCCC-EEEE
Confidence 666542 2236888885 233332 222233456788999988 5444
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004141 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~ 414 (771)
... ...|+++|. ++....+ .... .. ..+..++++++|+ |++... ....
T Consensus 200 ~~~----------~~~i~~~~~-~g~~~~~-----------~~~~--~~-----~~~~~i~~~~~g~-l~v~~~--~~~~ 247 (299)
T 2z2n_A 200 EII----------GNKIGRITT-SGEITEF-----------KIPT--PN-----ARPHAITAGAGID-LWFTEW--GANK 247 (299)
T ss_dssp ETT----------TTEEEEECT-TCCEEEE-----------ECSS--TT-----CCEEEEEECSTTC-EEEEET--TTTE
T ss_pred ccC----------CceEEEECC-CCcEEEE-----------ECCC--CC-----CCceeEEECCCCC-EEEecc--CCce
Confidence 322 245888887 4432111 0000 00 1233566788887 655542 2346
Q ss_pred EEEEECCCCcEEEecCCC--CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004141 415 IISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~--~~~~~~~~s~dg~~l~~~~~~~~~p~~l~~~~~~ 466 (771)
|++++. +++++.+.... .......+ ++| .+++..+ ...+++++..
T Consensus 248 i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g-~l~v~~~----~~~l~~~~~~ 294 (299)
T 2z2n_A 248 IGRLTS-NNIIEEYPIQIKSAEPHGICF-DGE-TIWFAME----CDKIGKLTLI 294 (299)
T ss_dssp EEEEET-TTEEEEEECSSSSCCEEEEEE-CSS-CEEEEET----TTEEEEEEEC
T ss_pred EEEECC-CCceEEEeCCCCCCccceEEe-cCC-CEEEEec----CCcEEEEEcC
Confidence 888898 57766664322 22233344 444 4555442 2457766654
No 488
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.53 E-value=0.0017 Score=63.23 Aligned_cols=175 Identities=13% Similarity=0.027 Sum_probs=101.5
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004141 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|.++|++++++..-. .+. .......+++|++ |+...|.. ..++++|.
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~----Ly~ltw~~--------------~~v~V~D~---------- 123 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLG--NIFAEGLASDGER----LYQLTWTE--------------GLLFTWSG---------- 123 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSC----EEEEESSS--------------CEEEEEET----------
T ss_pred CEEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCE----EEEEEccC--------------CEEEEEEC----------
Confidence 34999999999875542 222 2223345778888 88877533 37999998
Q ss_pred hhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004141 298 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++.+. .++.-. . ....+++||++|+. ++. ..+|+++|.++.+... .+.+..
T Consensus 124 -------~Tl~~~~ti~~~-~--eGwGLt~Dg~~L~v-SdG----------s~~l~~iDp~T~~v~~-------~I~V~~ 175 (268)
T 3nok_A 124 -------MPPQRERTTRYS-G--EGWGLCYWNGKLVR-SDG----------GTMLTFHEPDGFALVG-------AVQVKL 175 (268)
T ss_dssp -------TTTEEEEEEECS-S--CCCCEEEETTEEEE-ECS----------SSEEEEECTTTCCEEE-------EEECEE
T ss_pred -------CcCcEEEEEeCC-C--ceeEEecCCCEEEE-ECC----------CCEEEEEcCCCCeEEE-------EEEeCC
Confidence 55543 333322 1 23456689997754 432 2579999987755311 111111
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeeEEee
Q 004141 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLTL 442 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s~ 442 (771)
. .++ -..+..+.|. || +|++. .+. ...|.+||+++|++.....-. ......++++
T Consensus 176 ~----g~~---v~~lNeLe~~-dG-~lyan-vw~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 176 R----GQP---VELINELECA-NG-VIYAN-IWH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp T----TEE---CCCEEEEEEE-TT-EEEEE-ETT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred C----Ccc---cccccccEEe-CC-EEEEE-ECC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 1 110 0012344566 77 46643 333 348999999999977543211 1235567888
Q ss_pred cCCEEEEEEeCCCCCCeEEEEEe
Q 004141 443 DGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 443 dg~~l~~~~~~~~~p~~l~~~~~ 465 (771)
+++.|+.+.-.. +.+|.+.+
T Consensus 245 ~~~rlfVTGK~W---p~~~ev~~ 264 (268)
T 3nok_A 245 GSGRIFMTGKLW---PRLFEVRL 264 (268)
T ss_dssp TTCCEEEEETTC---SEEEEEEE
T ss_pred CCCEEEEeCCCC---CceEEEEE
Confidence 888888776544 55665544
No 489
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.47 E-value=0.035 Score=55.54 Aligned_cols=171 Identities=12% Similarity=0.050 Sum_probs=94.0
Q ss_pred ceEEEEEccCCceeeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 218 PSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|+++|.+ ++.+.+. .+ ....+..+++.++|+ |++... ....|+.++.
T Consensus 83 ~~v~~~d~~-g~~~~~~-~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~--------- 132 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP-LPQPDSGPYGITEGLNGD-----IWFTQL--------------NGDRIGKLTA--------- 132 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECSTTC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CeEEEECCC-CCeEEec-CCCCCCCCccceECCCCC-----EEEEcc--------------CCCeEEEECC---------
Confidence 568888887 5555442 22 223566788888886 665541 2237888886
Q ss_pred hhhhcCCCCCCcceec--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004141 297 LELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
+ ++...+ ...........+++||+ |++.... ...|+++|. +++...+
T Consensus 133 --------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~---------- 181 (300)
T 2qc5_A 133 --------D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ----------NNSIGRITN-TGKLEEY---------- 181 (300)
T ss_dssp --------T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEE----------
T ss_pred --------C-CCEEEccCCCCCCCceeEEECCCCC-EEEEecC----------CCeEEEECC-CCcEEEe----------
Confidence 4 443332 22334567788999998 5554432 235888887 3332111
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC--CCCceeeEEeecCCEEEEEEe
Q 004141 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~dg~~l~~~~~ 452 (771)
..+.... .+..+++.++|+ |++... ....|++++. +++...+... ........++++|+ |+++..
T Consensus 182 -~~~~~~~-------~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 248 (300)
T 2qc5_A 182 -PLPTNAA-------APVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEW 248 (300)
T ss_dssp -ECSSTTC-------CEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEET
T ss_pred -eCCCCCC-------CcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEecc
Confidence 0000001 123556778886 655543 2346888888 6776665322 12233445666765 554442
Q ss_pred CCCCCCeEEEEEe
Q 004141 453 SPVDVPQVKYGYF 465 (771)
Q Consensus 453 ~~~~p~~l~~~~~ 465 (771)
....|++++.
T Consensus 249 ---~~~~i~~~~~ 258 (300)
T 2qc5_A 249 ---GANQIGRITN 258 (300)
T ss_dssp ---TTTEEEEECT
T ss_pred ---CCCeEEEECC
Confidence 2345776664
No 490
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.39 E-value=0.015 Score=58.96 Aligned_cols=161 Identities=12% Similarity=0.202 Sum_probs=93.5
Q ss_pred cceEEEeCCCCCeEEEEecCCC------------CCCeEEEEecCCcceEEEecCCcccccccCCCcccceeec----CC
Q 004141 100 GASAVVPSPSGSKLLVVRNPEN------------ESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN----SD 163 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wS----pD 163 (771)
.....+++|+|+ +++.....+ ....++.++..++...+....... .++.|+ ||
T Consensus 118 ~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------~~i~~~~~~d~d 186 (314)
T 1pjx_A 118 GCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP----------NGIAVRHMNDGR 186 (314)
T ss_dssp CCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE----------EEEEEEECTTSC
T ss_pred CCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCc----------ceEEEecccCCC
Confidence 356789999996 434332110 124577776335544433221122 478899 99
Q ss_pred CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-CCcee---eccCCCCC
Q 004141 164 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQ---AVKGIPKS 239 (771)
Q Consensus 164 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~---~l~~~~~~ 239 (771)
|+.|++... ....|+++|++ +++.. .+...+..
T Consensus 187 g~~l~v~~~-------------------------------------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 187 PYQLIVAET-------------------------------------------PTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEEEET-------------------------------------------TTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEEEEEEC-------------------------------------------CCCeEEEEECCCCCccccceEEEECCCC
Confidence 987766422 12578888876 44421 11102222
Q ss_pred --CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCC
Q 004141 240 --LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI 316 (771)
Q Consensus 240 --~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~ 316 (771)
..+..+++++||+ |++... ....|+++|. ++++ ...+....
T Consensus 224 ~~~~p~~i~~d~~G~-----l~v~~~--------------~~~~i~~~d~-----------------~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN-----LLVANW--------------GSSHIEVFGP-----------------DGGQPKMRIRCPF 267 (314)
T ss_dssp SSCEEEEEEEBTTCC-----EEEEEE--------------TTTEEEEECT-----------------TCBSCSEEEECSS
T ss_pred CCCCCCceEECCCCC-----EEEEEc--------------CCCEEEEEcC-----------------CCCcEeEEEeCCC
Confidence 3456789999986 665542 2237888887 5333 33333333
Q ss_pred ccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004141 317 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 317 ~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
....+..|+|||+.|++..... ..|+++++...+
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~----------~~l~~~~~~~~g 301 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN----------NAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT----------TEEEEEECSSCB
T ss_pred CCceeEEECCCCCEEEEEeCCC----------CeEEEEeCCCCC
Confidence 4577889999999876665442 358898876543
No 491
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.37 E-value=0.0039 Score=62.34 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=98.8
Q ss_pred CCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004141 213 AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 213 ~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
++.....|+++|.++|+...-...........+.++|||+ |++.. . ..|+.+|.
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~-~---------------~~V~~~d~----- 63 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-----ILFSY-S---------------KGAKMITR----- 63 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-----EEEEC-B---------------SEEEEECT-----
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-----EEEeC-C---------------CCEEEECC-----
Confidence 3446689999999888865542122213567889999998 44432 1 14666664
Q ss_pred hhhhhhhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeE
Q 004141 293 EASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 371 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 371 (771)
++....++... .....++.++|||+.|+-.... ..+|+.+|.++.....+
T Consensus 64 ------------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----------~~~v~~vd~~Gk~l~~~------- 114 (276)
T 3no2_A 64 ------------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH----------PSTILEVNMKGEVLSKT------- 114 (276)
T ss_dssp ------------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST----------TEEEEEECTTSCEEEEE-------
T ss_pred ------------CCCEEEEEcCCCCccccccEECCCCCEEEEecCC----------CCEEEEEeCCCCEEEEE-------
Confidence 33333333322 1245678899999987654431 13567776532111110
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004141 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~dg~~l~~~~ 451 (771)
.+. ......+ ......+.++||+.|+ +.. ....++.+|.+ |++..-.............++|+.+++..
T Consensus 115 -~~~-~~~~~~~-----~~~~~v~~~~~G~~lv-~~~--~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 115 -EFE-TGIERPH-----AQFRQINKNKKGNYLV-PLF--ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp -EEC-CSCSSGG-----GSCSCCEECTTSCEEE-EET--TTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECB
T ss_pred -ecc-CCCCccc-----ccccCceECCCCCEEE-Eec--CCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeC
Confidence 000 0000000 0123456788998664 332 33468888987 66543332222222345566777665433
Q ss_pred eCCCCCCeEEEEEeccc
Q 004141 452 SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 452 ~~~~~p~~l~~~~~~~~ 468 (771)
. ..+++.++..++
T Consensus 184 ~----~~~v~~~d~~tG 196 (276)
T 3no2_A 184 D----AHCFVQLNLESN 196 (276)
T ss_dssp T----TSEEEEECTTTC
T ss_pred C----CCeEEEEeCcCC
Confidence 2 246777776544
No 492
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.28 E-value=0.052 Score=54.96 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=24.0
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec
Q 004141 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV 141 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 141 (771)
.....+++|||+ | |+.+.......++.++ .+++...+...
T Consensus 73 ~p~gia~~~dG~-l-~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 73 KVSGLAFTSNGD-L-VATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEEEEECTTSC-E-EEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CceeEEEcCCCc-E-EEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 456688999998 4 4444322234577776 56665555544
No 493
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.27 E-value=0.0042 Score=64.36 Aligned_cols=67 Identities=9% Similarity=0.183 Sum_probs=36.3
Q ss_pred ccceEEEeCCCCCeEEEEecCC--CCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEE
Q 004141 99 TGASAVVPSPSGSKLLVVRNPE--NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 169 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~ 169 (771)
.....++++|+|+ |.++.... .....++.++ .+++..+.+.++.... ........+.++|++..+++
T Consensus 67 ~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~yv 136 (343)
T 2qe8_A 67 DTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFVYI 136 (343)
T ss_dssp SCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEEEE
T ss_pred eEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEEEE
Confidence 4567889999986 54432210 0134677777 5566555555432110 01112357889988765544
No 494
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=97.23 E-value=0.00074 Score=69.27 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004141 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vv~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..+.++++||.++. ...|......| ++.|+.+++++.. . ...++++.+.+...+... ..
T Consensus 44 ~~~~~l~~~hg~~g~--~~~~~~~~~~l---~~~v~~~~~~~~~----------~----~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGS--TTVFHSLASRL---SIPTYGLQCTRAA----------P----LDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCC--SGGGHHHHHHC---SSCEEEECCCTTS----------C----TTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhc---CCCEEEEECCCCC----------C----cCCHHHHHHHHHHHHHHh-CC
Confidence 345679999997654 34566666665 3999999998310 1 113444444433333321 12
Q ss_pred CCeEEEEEcChhHHHHHHHHhhCC---Cc---eeEEEecCCc
Q 004141 615 PSKVTVVGGSHGGFLTTHLIGQAP---DK---FVAAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p---~~---~~~~v~~~p~ 650 (771)
..++.++||||||.++..++.+.+ +. ++.+++.++.
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 357999999999999999887643 34 6777765553
No 495
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.20 E-value=0.078 Score=59.41 Aligned_cols=163 Identities=12% Similarity=0.073 Sum_probs=102.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.......|.+.+.+|.+. +. ....|+.+. +++....++...... ..++++.+.++.|++. +.
T Consensus 349 ~~~~~ld~d~~~~~ly~s-D~--~~~~I~r~~~~g~~~~~v~~~~~~~---------p~GlAvD~~~~~lY~t-D~---- 411 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWT-DD--EVRAIRRSFIDGSGSQFVVTAQIAH---------PDGIAVDWVARNLYWT-DT---- 411 (619)
T ss_dssp SSEEEEEEETTTTEEEEE-ET--TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEE-ET----
T ss_pred CccEEEEEEcCCCeEEEE-eC--CCCeEEEEEcCCCccEEEEECCCCC---------cCceEEecccCcEEEE-eC----
Confidence 345677888888888665 32 234577777 444444444322111 1477888777777664 21
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|.+.++++...+.+. ...-..+..++..|....
T Consensus 412 --------------------------------------~~~~I~v~~~~G~~~~~l~-~~~l~~P~~iavdp~~G~---- 448 (619)
T 3s94_A 412 --------------------------------------GTDRIEVTRLNGTMRKILI-SEDLEEPRAIVLDPMVGY---- 448 (619)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCCSEEEEEEETTTTE----
T ss_pred --------------------------------------CCCcEEEEeCCCCeEEEEE-ECCCCCeeeEEEEcCCCc----
Confidence 2368899999887766662 122235678889887554
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEec
Q 004141 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+|+-|. ....|++.++ ++...+.|.. ........++++++++|++...
T Consensus 449 ly~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 449 MYWTDWG-------------EIPKIERAAL-----------------DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEecCC-------------CCCEEEEEcc-----------------CCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 7766532 1237999998 5554444433 3445667899999999998875
Q ss_pred CCCCCCCCccccccceeeecCCCCC
Q 004141 337 KSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
.. ..|..+++++...
T Consensus 499 ~~----------~~I~~~~~dG~~~ 513 (619)
T 3s94_A 499 KT----------DKIEVMNTDGTGR 513 (619)
T ss_dssp TT----------TEEEEEESSSCCC
T ss_pred CC----------CEEEEEecCCCce
Confidence 43 4799999876543
No 496
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.13 E-value=0.24 Score=49.18 Aligned_cols=169 Identities=9% Similarity=0.005 Sum_probs=91.3
Q ss_pred ceEEEEEccCCceeeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 218 PSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|+++|.+ ++...+. .+ ....+..+++.+||+ |++... ....|++++.
T Consensus 125 ~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~-----l~v~~~--------------~~~~i~~~~~--------- 174 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNA-----LWFTEN--------------QNNSIGRITN--------- 174 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSS-----EEEEET--------------TTTEEEEECT---------
T ss_pred CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCC-----EEEEec--------------CCCeEEEECC---------
Confidence 578888887 5555442 22 233566788889886 665541 2236888885
Q ss_pred hhhhcCCCCCCcceec--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004141 297 LELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
. ++...+ ...........+++||+ |++.... ...|+++|. ++......
T Consensus 175 --------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~~--------- 224 (300)
T 2qc5_A 175 --------T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM----------GNKIGRITT-TGEISEYD--------- 224 (300)
T ss_dssp --------T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEEE---------
T ss_pred --------C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccC----------CCEEEEEcC-CCcEEEEE---------
Confidence 2 222222 22233466788899986 5554432 235888886 33321110
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC--CCCceeeEEeecCCEEEEEEe
Q 004141 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~dg~~l~~~~~ 452 (771)
.+. .+ ..+..+++.++|+ |+++.. +...|++++. +++.+.+... ........++++|+ |++..
T Consensus 225 --~~~--~~-----~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~- 289 (300)
T 2qc5_A 225 --IPT--PN-----ARPHAITAGKNSE-IWFTEW--GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGS-VWFAL- 289 (300)
T ss_dssp --CSS--TT-----CCEEEEEECSTTC-EEEEET--TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSC-EEEEC-
T ss_pred --CCC--CC-----CCceEEEECCCCC-EEEecc--CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCC-EEEEc-
Confidence 000 00 1223566788887 666542 2346888888 5676655332 22234455666765 44432
Q ss_pred CCCCCCeEEEEEe
Q 004141 453 SPVDVPQVKYGYF 465 (771)
Q Consensus 453 ~~~~p~~l~~~~~ 465 (771)
. . .|++++.
T Consensus 290 ~--~--~i~~~~p 298 (300)
T 2qc5_A 290 K--C--KIGKLNL 298 (300)
T ss_dssp S--S--EEEEEEE
T ss_pred c--C--ceEEeCC
Confidence 2 2 6776654
No 497
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.09 E-value=0.043 Score=52.78 Aligned_cols=205 Identities=10% Similarity=0.077 Sum_probs=114.2
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004141 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.+...|++ .+| |.+....+.+.+..++ ..++..+.+.++.... +...+++|++|+-+.
T Consensus 23 tqGL~~~~--~~L-yestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f----------geGi~~~~~~ly~lt-------- 81 (243)
T 3mbr_X 23 TEGLFYLR--GHL-YESTGETGRSSVRKVDLETGRILQRAEVPPPYF----------GAGIVAWRDRLIQLT-------- 81 (243)
T ss_dssp EEEEEEET--TEE-EEEECCTTSCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEE--------
T ss_pred cccEEEEC--CEE-EEECCCCCCceEEEEECCCCCEEEEEeCCCCcc----------eeEEEEeCCEEEEEE--------
Confidence 34567775 344 6666555677888888 7777777777655442 333555677766542
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004141 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
| ....++++|.++.++..- .+... .....++||+. |+
T Consensus 82 ----------------------------w-------~~~~v~v~D~~tl~~~~t--i~~~~--~Gwglt~dg~~----L~ 118 (243)
T 3mbr_X 82 ----------------------------W-------RNHEGFVYDLATLTPRAR--FRYPG--EGWALTSDDSH----LY 118 (243)
T ss_dssp ----------------------------S-------SSSEEEEEETTTTEEEEE--EECSS--CCCEEEECSSC----EE
T ss_pred ----------------------------e-------eCCEEEEEECCcCcEEEE--EeCCC--CceEEeeCCCE----EE
Confidence 1 237899999998876544 22221 23456789886 65
Q ss_pred EEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecC--CCCcc---ccceeecCCCCEEEE
Q 004141 260 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT--ESISS---AFFPRFSPDGKFLVF 333 (771)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt--~~~~~---~~~p~~SpDG~~l~f 333 (771)
. ++ ....|+.+|. ++.+. .++. ..... .....|. +|+ | |
T Consensus 119 v-Sd--------------gs~~l~~iDp-----------------~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-l-y 163 (243)
T 3mbr_X 119 M-SD--------------GTAVIRKLDP-----------------DTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-L-L 163 (243)
T ss_dssp E-EC--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TTE-E-E
T ss_pred E-EC--------------CCCeEEEEeC-----------------CCCeEEEEEEEccCCcccccceeeEEe-CCE-E-E
Confidence 4 42 3347999997 55432 2332 21111 1223343 665 4 4
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~ 413 (771)
...-. ...|.++|.++++.... -++..+.........+ -...+..++|.|++++||++. ..+.
T Consensus 164 anvw~---------s~~I~vIDp~tG~V~~~----idl~~l~~~~~~~~~~--~~~vlNGIA~d~~~~~lfVTG--K~wp 226 (243)
T 3mbr_X 164 ANVWL---------TSRIARIDPASGKVVAW----IDLQALVPDADALTDS--TNDVLNGIAFDAEHDRLFVTG--KRWP 226 (243)
T ss_dssp EEETT---------TTEEEEECTTTCBEEEE----EECGGGSTTTTSCCCT--TSSCEEEEEEETTTTEEEEEE--TTCS
T ss_pred EEECC---------CCeEEEEECCCCCEEEE----EECCcCccccccccCC--cCCceEEEEEcCCCCEEEEEC--CCCC
Confidence 33221 35799999988875211 0000010000000000 001245789999999887764 4567
Q ss_pred EEEEEECC
Q 004141 414 VIISVNVS 421 (771)
Q Consensus 414 ~l~~~d~~ 421 (771)
.||.|.+.
T Consensus 227 ~~~~v~~~ 234 (243)
T 3mbr_X 227 MLYEIRLT 234 (243)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEe
Confidence 88887753
No 498
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.94 E-value=0.022 Score=55.31 Aligned_cols=144 Identities=10% Similarity=-0.018 Sum_probs=76.6
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004141 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...++++|.++.++..- ++.. ......++||+. |+ +++ ....|+.+|.
T Consensus 115 ~~~v~V~D~~Tl~~~~t--i~~~--~eGwGLt~Dg~~----L~-vSd--------------Gs~~l~~iDp--------- 162 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERT--TRYS--GEGWGLCYWNGK----LV-RSD--------------GGTMLTFHEP--------- 162 (268)
T ss_dssp SCEEEEEETTTTEEEEE--EECS--SCCCCEEEETTE----EE-EEC--------------SSSEEEEECT---------
T ss_pred CCEEEEEECCcCcEEEE--EeCC--CceeEEecCCCE----EE-EEC--------------CCCEEEEEcC---------
Confidence 37899999998876544 2222 122455678875 54 442 3348999997
Q ss_pred hhhhcCCCCCCcc-eecC--CCCcc---ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceee
Q 004141 297 LELKESSSEDLPV-VNLT--ESISS---AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 370 (771)
Q Consensus 297 ~~~~~~~~~~~~~-~~lt--~~~~~---~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 370 (771)
++.+. .++. ..... .....|. ||+ |+ ...-. ...|.++|.++++..... +
T Consensus 163 --------~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-ly-anvw~---------s~~I~vIDp~TG~V~~~I----d 218 (268)
T 3nok_A 163 --------DGFALVGAVQVKLRGQPVELINELECA-NGV-IY-ANIWH---------SSDVLEIDPATGTVVGVI----D 218 (268)
T ss_dssp --------TTCCEEEEEECEETTEECCCEEEEEEE-TTE-EE-EEETT---------CSEEEEECTTTCBEEEEE----E
T ss_pred --------CCCeEEEEEEeCCCCcccccccccEEe-CCE-EE-EEECC---------CCeEEEEeCCCCcEEEEE----E
Confidence 55443 2222 22111 2234555 774 54 43321 357999999888752110 0
Q ss_pred EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004141 371 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 371 ~~~~~~~~~~~~f~g~~~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
+..+.........+ ....+..++|.|++++||++. ..+..||.|.+
T Consensus 219 l~~L~~~~~~~~~~--~~~vlNGIA~dp~~~rlfVTG--K~Wp~~~ev~~ 264 (268)
T 3nok_A 219 ASALTRAVAGQVTN--PEAVLNGIAVEPGSGRIFMTG--KLWPRLFEVRL 264 (268)
T ss_dssp CHHHHHHHTTTCCC--TTCCEEEEEECTTTCCEEEEE--TTCSEEEEEEE
T ss_pred CCCCcccccccccC--cCCceEEEEEcCCCCEEEEeC--CCCCceEEEEE
Confidence 00000000000000 001245789999999887754 45678887764
No 499
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.016 Score=62.05 Aligned_cols=158 Identities=15% Similarity=0.257 Sum_probs=91.3
Q ss_pred cceEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004141 100 GASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
....++++| ++..|.+ .+.. ..++.++ .++....+....... ..++|++||++|+...... .
T Consensus 138 ~P~~lavdp~~~g~Lyv-~d~~---~~I~~id~~~~~v~~~~~~~~~P----------~~ia~d~~G~~lyvad~~~-~- 201 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYL-VGEQ---HPTRLIDFEKEYVSTVYSGLSKV----------RTICWTHEADSMIITNDQN-N- 201 (430)
T ss_dssp CCCEEEEETTEEEEEEE-EEBT---EEEEEEETTTTEEEEEECCCSCE----------EEEEECTTSSEEEEEECCS-C-
T ss_pred CCCEEEECCCCCCeEEE-EeCC---CcEEEEECCCCEEEEEecCCCCc----------ceEEEeCCCCEEEEEeCCC-C-
Confidence 456788999 5666644 4432 4577777 444444443321122 4899999999665543211 0
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCCCCccceEEEecCCCCCc
Q 004141 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
.....+++++.+++-. +.+ ..-.....++++|++..
T Consensus 202 -------------------------------------~~~~~v~~~~~~g~~~~~~~l---~~~~~p~giavdp~~g~-- 239 (430)
T 3tc9_A 202 -------------------------------------NDRPNNYILTRESGFKVITEL---TKGQNCNGAETHPINGE-- 239 (430)
T ss_dssp -------------------------------------TTSEEEEEEEGGGTSCSEEEE---EECSSCCCEEECTTTCC--
T ss_pred -------------------------------------cccceEEEEeCCCceeeeeee---ccCCCceEEEEeCCCCE--
Confidence 0123456666554322 222 11224567889996555
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC--CCccccceeecCCCCEEEE
Q 004141 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE--SISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~--~~~~~~~p~~SpDG~~l~f 333 (771)
|+++.+ ....|++++. +++....+.. ........+|+|||++|++
T Consensus 240 --lyv~d~--------------~~~~V~~~~~-----------------~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 240 --LYFNSW--------------NAGQVFRYDF-----------------TTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp --EEEEET--------------TTTEEEEEET-----------------TTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred --EEEEEC--------------CCCEEEEEEC-----------------CCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 777652 2347999997 5554423321 1223567899999998877
Q ss_pred EecCCCCCCCCccccccceeeecCC
Q 004141 334 LSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
..... .+|++++.+.
T Consensus 287 ~d~~~----------~~I~~~~~d~ 301 (430)
T 3tc9_A 287 VVVNQ----------HYILRSDYDW 301 (430)
T ss_dssp EETTT----------TEEEEEEEET
T ss_pred EECCC----------CEEEEEeCCc
Confidence 76442 5688877654
No 500
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.87 E-value=0.16 Score=52.15 Aligned_cols=109 Identities=15% Similarity=0.014 Sum_probs=63.5
Q ss_pred CceEEEEEccCCceeeccCCCC--CCccceEEEecCCCCCccEEEEEee--cCcceeeee-eeeccCCceeEEEeccccc
Q 004141 217 QPSLFVININSGEVQAVKGIPK--SLSVGQVVWAPLNEGLHQYLVFVGW--SSETRKLGI-KYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~--~~~~~~~~wspDg~~~~~~l~~~~~--~~~~~~~g~-~~~~~~~~~l~~~d~~~~~ 291 (771)
...||.++.+++..+.+....+ -....+....+||+ +++... ..++..... .+.....+.||+++.
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-----fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~---- 210 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-----FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP---- 210 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-----EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT----
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-----EEecCCcEeCCcccccchhhccCCccEEEEEEC----
Confidence 3567778877665554421111 22566888999987 555432 111100000 000012357899874
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004141 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
++.+.+.........++|||||++|++.... ..+|++++++..
T Consensus 211 ---------------~~~~~~~~~l~~pNGia~spDg~~lYvadt~----------~~~I~~~~~~~~ 253 (355)
T 3sre_A 211 ---------------NDVRVVAEGFDFANGINISPDGKYVYIAELL----------AHKIHVYEKHAN 253 (355)
T ss_dssp ---------------TCCEEEEEEESSEEEEEECTTSSEEEEEEGG----------GTEEEEEEECTT
T ss_pred ---------------CeEEEeecCCcccCcceECCCCCEEEEEeCC----------CCeEEEEEECCC
Confidence 3455555444556789999999999887754 357999998643
Done!