BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004146
(771 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0005 PE=3 SV=1
Length = 681
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 241/419 (57%), Gaps = 20/419 (4%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
VGQ+LSTRPD++ L+ L DQ+P FP +A + IEEELG+P E ++ +S EP+A
Sbjct: 121 VGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRFIEEELGAPAEEIYAELSPEPIA 180
Query: 220 AASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILR-IGLGLLQKIAKRKSDLRLYA 278
AAS GQVY+G G VAVKVQRP+L + DIYI+R + L + + + +SDL
Sbjct: 181 AASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDIYIMRSLSLWARRSVKRLRSDLVAIT 240
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
DEL + E++Y EA N +F + + P I+VP ++ + +RVLTMEW+ G T+
Sbjct: 241 DELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYWQYTGRRVLTMEWVEGIKLTN 300
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY 398
+ ++ Q +DA LV GV+ +L QLLE G HADPHPGNL
Sbjct: 301 IKAIQA-------------QGIDAT----HLVEVGVQCSLRQLLEHGFFHADPHPGNLLA 343
Query: 399 TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVT 458
+ G++ +LDFG++ ++ ++ ++ ++VH+VN D+ SL ++D ++P T+ +
Sbjct: 344 MADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAKDYVKLDFLKPDTDLKPII 403
Query: 459 MDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAG 518
L G + ++ F + ++ ++ ++ FR+P YY L++RS+ +LEG+AI
Sbjct: 404 PALGQVFGNA-LGASVAELNFKSITDQMSAMMYEFPFRVPAYYALIIRSMVTLEGIAIGI 462
Query: 519 DPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKGL 577
DP+FK AYP++ ++LLT+ S R L ++F K+ F+W RL LR G
Sbjct: 463 DPNFKVLSKAYPYIAKRLLTDQSEELRTSLKELLF-KEGSFRWNRLENLLRNAKNSPGF 520
>sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1919 PE=3 SV=1
Length = 566
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 276/553 (49%), Gaps = 85/553 (15%)
Query: 115 KPLP--------EVYNPQDVADYFNCRPHIVGLRLLELQDYQYASYMP-LLAD------- 158
KPLP YN Q +A+Y+ RP V R LE+ + + ++ LL D
Sbjct: 5 KPLPPQSELDNIRRYNAQAIANYYRRRPWKVLWRALEVV-WSFGFFLTCLLWDQWTGQVE 63
Query: 159 ----------------------AVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMK 196
VGQ+LSTRPD++ D + L +L DQ+PPF +A +
Sbjct: 64 YYKRQRAEDLRELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIKLQDQLPPFDNDLAFQ 123
Query: 197 IIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYI 256
++EE+LG V+ + IS PVAAAS GQVYR G VAVKVQRPNLR + D+Y+
Sbjct: 124 LMEEQLGMKVDEAYREISAHPVAAASLGQVYRAMLFSGEEVAVKVQRPNLRPRLSLDLYL 183
Query: 257 LRIGLGLLQKIAK-----RKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFI 311
+R+G QK + DL L DE G L E+DY E NA +F E+ +
Sbjct: 184 MRLG---AQKFGRFLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEKFAENFHGDAEV 240
Query: 312 HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN 371
VP ++ S ++VLT+EW+ G TD + + +D S D++
Sbjct: 241 KVPCIYWQYSNQKVLTLEWIQGFKLTDTDKIR-AAGLDPS----------------DIIR 283
Query: 372 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIV 431
GV + L QLLE G HADPHPGNL T G++ ++DFG++ ++E + + +SIV ++
Sbjct: 284 IGVTSGLRQLLEHGFFHADPHPGNLFATLDGRMAYIDFGMMDQLEPGTKETIASSIVQLI 343
Query: 432 NGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIAL 491
N D+ +L + + P T+ + LE+ G + D F + +
Sbjct: 344 NKDYLALTEDFIALGFLAPNTDITPIIPALENVFGSA-IGQSVQDFNFKTITDDFSELMY 402
Query: 492 KYHFRMPPYYTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSV 551
Y FR+P + L++RSL + EGLA++ DP+FK E AYP+V ++LLT S R+ L V
Sbjct: 403 DYPFRVPAKFALIIRSLVTQEGLALSLDPNFKIVEVAYPYVARRLLTGESPQLRRQLIDV 462
Query: 552 VFNKKKEFQWQRLSLFLRVGATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRT 611
+F K +FQWQRL L + +++T D LP A L L+ L +
Sbjct: 463 LF-KNGKFQWQRLENMLSIA------------RSDTKFDLLP-------TAQLGLQFLFS 502
Query: 612 NNGVVLRRLLMTA 624
G+ LRR ++ A
Sbjct: 503 EEGLYLRRQILLA 515
>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390,
chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1
SV=1
Length = 682
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 224/411 (54%), Gaps = 22/411 (5%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ L+ RPDII D L L D +PPFP +A IIEEELG P+E+ FS IS + +AA
Sbjct: 185 GQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQPLENIFSKISSQTIAA 244
Query: 221 ASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRK--SDLRLY 277
AS GQVYR + G VA+KVQRP + ++ RD+++ R L + +K + L
Sbjct: 245 ASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFLNGFSLQKLGCNAELI 304
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
DE G+ L+ ELDYTLEA N +F E+ P + +P V++ L RVL MEW+ G T
Sbjct: 305 VDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCGPRVLVMEWIDGIRCT 364
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
D ++ DA L + GV A L QLLE G+ H DPHPGN+
Sbjct: 365 DPQAIK-----------------DAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIF 407
Query: 398 YTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV 457
G+I ++DFG + + ++++ ++ ++VH VN D+ + + T + + T+ +
Sbjct: 408 AMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPI 467
Query: 458 TMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIA 517
LE A+ + G+ D F V G+ + + R+P ++LV+RSL + EG+
Sbjct: 468 VPALE-AIWQNSAGKGLADFNFRSVTGQFNKLVYDFPIRIPERFSLVIRSLLTQEGICFT 526
Query: 518 GDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFL 568
P FK E AYP+V ++LLT+ + A R+ L V+F K FQW+RL L
Sbjct: 527 LKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLF-KDGVFQWKRLENLL 576
>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,
chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1
SV=1
Length = 711
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 248/466 (53%), Gaps = 42/466 (9%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
+GQ LSTRPD+ D + L+EL D +P FP + A IE EL +E+ FS +S EP+A
Sbjct: 164 LGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIERELDLSLETIFSSVSPEPIA 223
Query: 220 AASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLL--QKIAKRKSDLRL 276
AAS GQVY+ G +VAVKVQRP + + D Y++R G+G L + + +D+
Sbjct: 224 AASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIR-GVGKLINKYVDFITTDVLT 282
Query: 277 YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESP 336
DE + EL+Y EA NA F++ ++ + VP +F + ++VLTMEW+ G
Sbjct: 283 LIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIFWDYTSRKVLTMEWVEGTKL 342
Query: 337 TDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL 396
+ +++ + ++LDLVN G++ +L QLLE G HADPHPGNL
Sbjct: 343 NEQLAIESQG-----------------LKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNL 385
Query: 397 RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLR 456
T G++ FLDFG++ + +FA++ +VH+VN D++++ + + P +
Sbjct: 386 LATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDVTP 445
Query: 457 VTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAI 516
+ L D + + ++ F ++ + ++ +Y F +PPYY L+LRSL LEGLA+
Sbjct: 446 IIPALRDFFDDA-LNYTVSELNFKTLVDGLGAVFYQYPFNVPPYYALILRSLTVLEGLAL 504
Query: 517 AGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRVGATRKG 576
DP+FK A+YP+ ++LLT+ + R L ++F K +F+W RL L+ G+ +
Sbjct: 505 YADPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLF-KDGKFRWNRLENLLQQGSKDRD 563
Query: 577 LQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLM 622
DA VL+LL NG LR L++
Sbjct: 564 F-------------------SAKDALQPVLKLLLDPNGEELRLLVI 590
>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810,
chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1
SV=1
Length = 692
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 217/397 (54%), Gaps = 27/397 (6%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
+ Q++S+RPD+I LS L DQI PF +A +IE+ELG P++ FS IS EPVA
Sbjct: 137 IAQAVSSRPDLIPPIYLDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVA 196
Query: 220 AASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYA 278
AAS GQVY+ G +VAVKVQRP +R + D ILR GL++K + SDL
Sbjct: 197 AASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALDTLILRYIAGLIKKAGRFNSDLEAVV 256
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
DE L E+DY EA N +F++ + + VPK++ S +VL MEW+ G
Sbjct: 257 DEWATSLFKEMDYLNEAQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEG----- 311
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY 398
QKL+ + L LV GV + QLLE G HADPHPGN
Sbjct: 312 -------------------QKLN-EVNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLR 351
Query: 399 TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVT 458
T GQ+ +LDFG++ + + + + +H+VN D+++L + ++ P VT
Sbjct: 352 TYDGQLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVT 411
Query: 459 MDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAG 518
L D + G+ ++ F +LG + ++ FR+PPY++LV+RSLA LEG+AI
Sbjct: 412 KALTDVFQDA-ISRGVRNISFGDLLGDLGKTMYRFKFRIPPYFSLVIRSLAVLEGIAIGI 470
Query: 519 DPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNK 555
P++K + YP++ +K+LT++S + L ++++ +
Sbjct: 471 SPNYKVLGSTYPWIARKILTDSSPQLKSSLQNLLYEE 507
>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0095 PE=3 SV=1
Length = 567
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 199/385 (51%), Gaps = 36/385 (9%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
+GQSLSTR DII ++ +A ++L D++PPF A+ +IE+EL ++ F P+A
Sbjct: 75 IGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVTPLA 134
Query: 220 AASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKR--------- 270
+AS GQV+R G V VKVQRP L ++ D +L L ++AKR
Sbjct: 135 SASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLHQTL----RLAKRWLPGFRRLA 190
Query: 271 -KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTME 329
K ++ E L E+DY E NA F+++ + +P + VP+++ + + VLT+E
Sbjct: 191 QKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADYPRVRVPEIYWQYTTRMVLTLE 250
Query: 330 WMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV-NKGVEATLVQLLETGILH 388
++ G VD DRQ L+ LDLV G+ A L QLL G
Sbjct: 251 YL------------PGIKVD------DRQALETAGINLDLVIQTGICAYLKQLLVDGFFQ 292
Query: 389 ADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV 448
+DPHPGN+ S G + F DFG + ++ + M+ + ++ D ++ +L M +V
Sbjct: 293 SDPHPGNMAVDSQGDLIFYDFGTMAEVKIIAKDQMVQTFFAVLRKDTNQVLEALIYMGLV 352
Query: 449 RPGTNTLRVTMDLEDALGEVEFKDGIPDVK-FSRVLGKIWSIALKYHFRMPPYYTLVLRS 507
P + + + L F+D D+K F +V +++++ + FR+PP T +L+S
Sbjct: 353 EPKGDLSPIKRIINFLLD--NFRDKPIDIKAFDQVGEEVYAMFQQQPFRLPPQMTFILKS 410
Query: 508 LASLEGLAIAGDPHFKTFEAAYPFV 532
+++L+G+A A DP + A+ PF+
Sbjct: 411 ISTLDGIARALDPRYNLIAASQPFI 435
>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1
Length = 503
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 20/376 (5%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTRPD+I D + L++L D++PPF ++ + IE+ LG +E ++ EP+A+
Sbjct: 69 GQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAEFETEPIAS 128
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL--RLYA 278
AS QV++ G VAVKV RPNL V+ +D+ ++R G G ++++ L R
Sbjct: 129 ASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVERLFADGKRLKPREVV 188
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E K L ELD EAANAS+ + + VPKVF VLT+EWM G +D
Sbjct: 189 AEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTSDVLTIEWMDGTPVSD 248
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY 398
+ L DG H L + GVE Q+ G HAD HPGN+
Sbjct: 249 IAKLKA----DGIDLH-------------KLADYGVEIFFTQVFRDGFFHADMHPGNILV 291
Query: 399 TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVT 458
+ + LDFG++ + + + + + N D++ + + E V T +
Sbjct: 292 AADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEELE 351
Query: 459 MDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIAG 518
+ A+ E F I + F VL +++ ++ +++ + P L+ ++L ++EGL
Sbjct: 352 AAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQL 410
Query: 519 DPHFKTFEAAYPFVIQ 534
DP ++ A PF+++
Sbjct: 411 DPDLDLWKTAKPFLVK 426
>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1770 PE=3 SV=1
Length = 585
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 222/480 (46%), Gaps = 55/480 (11%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
VGQ STR D+ ++ + LS+L D++P F A IIEEELG P+ + P+A
Sbjct: 102 VGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPVPLA 161
Query: 220 AASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLY 277
AAS GQV++ G V VKVQRP L+ + D+ IL+ Q K R D
Sbjct: 162 AASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQNHPKWGRGRDWNGI 221
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+E K L E DY E +A F+ + ++ VP+V+ + ++LT+E++ G
Sbjct: 222 YEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWRYTSTQILTLEYLPG---- 277
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
I +S +++ + L+R+ +L G A L QLL G HADPHPGNL
Sbjct: 278 --IKISHYDALEAAG--LERK---------ELAQLGARAYLFQLLNHGFFHADPHPGNLA 324
Query: 398 YT-SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLR 456
+ +G++ F DFG++ + + ++ ++ + + + +V+SL + L+
Sbjct: 325 VSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVAL-------GALK 377
Query: 457 VTMDLEDALGEVEF-KDGIPDVKF-----SRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T D+ V+F D D F +++ ++ IA FR P +T V+R+ ++
Sbjct: 378 ETEDMGPIRRSVQFLLDNFMDKPFEEQSITKISDDLYEIAYDQPFRFPATFTFVMRAFST 437
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQWQRLSLFLRV 570
LEG+ DP F A PF +Q + N FN + ++V
Sbjct: 438 LEGVGKGLDPDFNFMAVAQPFALQIMNNSNG-----------FNPAGNIMDELGRQAVQV 486
Query: 571 GATRKGLQQVIAPKTETTLDYLPNRVGVFDAANLVLRLLRTNNGVVLRRLLMTADGASLI 630
G + GL + I E +LD L D ++ +R+ T +LRR+ G + +
Sbjct: 487 GNSALGLPRRI----EDSLDRL-------DRGDIRVRVRSTETDRLLRRMGTMQMGTNYV 535
>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=ubiB PE=3 SV=1
Length = 503
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 22/377 (5%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTRPD+I D + L++L D++PPF ++ + IE+ LG +E ++ EP+A+
Sbjct: 69 GQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEKLYAEFETEPIAS 128
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV++ G VAVKV RPNL ++ +D+ ++R G ++++ +R L +
Sbjct: 129 ASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDLSLMRFGAAWVERLFSDGRRLKPLEVV 188
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
A E K L ELD EAANA + + + VPKVF VLT+EWM G
Sbjct: 189 A-EFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFYDYCTSDVLTIEWMDGTPVA 247
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
D+ L DG H L + GVE Q+ G HAD HPGN+
Sbjct: 248 DIAKLKA----DGIDLH-------------KLADYGVEIFFTQVFRDGFFHADMHPGNIL 290
Query: 398 YTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV 457
+ + LDFG++ + + + + + N D++ + + E V T +
Sbjct: 291 VAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHIESGWVPADTRAEEL 350
Query: 458 TMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGLAIA 517
+ A+ E F I + F VL +++ ++ +++ + P L+ ++L ++EGL
Sbjct: 351 EAAVR-AVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIEGLGRQ 409
Query: 518 GDPHFKTFEAAYPFVIQ 534
DP ++ A PF+++
Sbjct: 410 LDPDLDLWKTAKPFLVK 426
>sp|Q9HUB8|UBIB_PSEAE Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=ubiB PE=3 SV=1
Length = 533
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPFP +A+K IEE+LG+ +E F+ EP+A+
Sbjct: 75 GQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQVFARFEREPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV+ G V VKV RPNL V+ DI L I L +++ A+R + +
Sbjct: 135 ASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAERVSSEARRLHPVEVV 194
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+D K +V ELD EAANAS+ + + P ++VP+V+ R +VL ME + G T
Sbjct: 195 SD-YEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIPVT 253
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL- 396
DL +L Q+ D K L +GVE Q+ HAD HPGN+
Sbjct: 254 DLETLRD-------------QRTDFK----ALAERGVEIFFTQVFRDSFFHADMHPGNIF 296
Query: 397 ---RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
R S Q +D G++ + + Q + +++ D++ + + V T
Sbjct: 297 VSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPAETK 356
Query: 454 TLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
D E A+ E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 357 ----VNDFEAAIRTVCEPIFEKPLKDISFGQVLLRLFQTARRFNMEIQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPELDLWATAQPFL 434
>sp|B7V3F8|UBIB_PSEA8 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain LESB58) GN=ubiB PE=3 SV=1
Length = 533
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPFP +A+K IEE+LG+ +E F+ EP+A+
Sbjct: 75 GQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQVFARFEREPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV+ G V VKV RPNL V+ DI L I L +++ A+R + +
Sbjct: 135 ASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAERVSSEARRLHPVEVV 194
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+D K +V ELD EAANAS+ + + P ++VP+V+ R +VL ME + G T
Sbjct: 195 SD-YEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIPVT 253
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL- 396
DL +L Q+ D K L +GVE Q+ HAD HPGN+
Sbjct: 254 DLETLRD-------------QRTDFK----ALAERGVEIFFTQVFRDSFFHADMHPGNIF 296
Query: 397 ---RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
R S Q +D G++ + + Q + +++ D++ + + V T
Sbjct: 297 VSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPAETK 356
Query: 454 TLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
D E A+ E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 357 ----VNDFEAAIRTVCEPIFEKPLKDISFGQVLLRLFQTARRFNMEIQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPELDLWATAQPFL 434
>sp|A6VDI8|UBIB_PSEA7 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain PA7) GN=ubiB PE=3 SV=1
Length = 533
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPFP +A+K IEE+LG+ +E F+ EP+A+
Sbjct: 75 GQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQVFARFEREPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV+ G V VKV RPNL V+ DI L I L +++ A+R + +
Sbjct: 135 ASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAERVSSEARRLHPVEVV 194
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+D K +V ELD EAANAS+ + + P ++VP+V+ R +VL ME + G T
Sbjct: 195 SD-YEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIPVT 253
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL- 396
DL +L Q+ D K L +GVE Q+ HAD HPGN+
Sbjct: 254 DLETLRD-------------QRTDFK----ALAERGVEIFFTQVFRDSFFHADMHPGNIF 296
Query: 397 ---RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
R S Q +D G++ + + Q + +++ D++ + + V T
Sbjct: 297 VSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPAETK 356
Query: 454 TLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
D E A+ E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 357 ----VNDFEAAIRTVCEPIFEKPLKDISFGQVLLRLFQTARRFNMEIQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPELDLWATAQPFL 434
>sp|Q02EV2|UBIB_PSEAB Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=ubiB PE=3 SV=1
Length = 533
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPFP +A+K IEE+LG+ +E F+ EP+A+
Sbjct: 75 GQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQVFARFEREPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV+ G V VKV RPNL V+ DI L I L +++ A+R + +
Sbjct: 135 ASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILARLAERVSSEARRLHPVEVV 194
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+D K +V ELD EAANAS+ + + P ++VP+V+ R +VL ME + G T
Sbjct: 195 SD-YEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIPVT 253
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL- 396
DL +L Q+ D K L +GVE Q+ HAD HPGN+
Sbjct: 254 DLETLRD-------------QRTDFK----ALAERGVEIFFTQVFRDSFFHADMHPGNIF 296
Query: 397 ---RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
R S Q +D G++ + + Q + +++ D++ + + V T
Sbjct: 297 VSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPAETK 356
Query: 454 TLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
D E A+ E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 357 ----VNDFEAAIRTVCEPIFEKPLKDISFGQVLLRLFQTARRFNMEIQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPELDLWATAQPFL 434
>sp|A4XPM5|UBIB_PSEMY Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
mendocina (strain ymp) GN=ubiB PE=3 SV=1
Length = 527
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 186/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L DQ+PPFP A+ +IE +LG+PV F+ +P+A+
Sbjct: 74 GQLLSTRRDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQLFARFDSQPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS-DLRL--- 276
AS QV+ G V VKV RP L+ V+ +D+ L LL +IA+R S D R
Sbjct: 134 ASVAQVHAAQLKSGEEVVVKVVRPGLKPVIRQDL----AWLFLLARIAERASADARRLRP 189
Query: 277 --YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
+ K + ELD EAANAS+ + + P ++VP+V+ L R +VL ME + G
Sbjct: 190 VEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYWDLCRHQVLVMERIYGV 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TDL +L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 PVTDLATLAD-------------QRTDMKL----LAERGVEIFFTQVFRDSFFHADMHPG 292
Query: 395 NL----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ R S Q +D G++ + + Q + +++ D++ + + V
Sbjct: 293 NIFVSTRTPWSPQYIAIDCGIIGSLTDEDQDYLARNLIAFFKRDYRKVAQLHIDSGWVPA 352
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + E F+ + D+ F ++L +++ A +++ + P L+ ++L +
Sbjct: 353 DTKVNEFEAAIR-TVCEPIFEKPLKDISFGQLLLRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 412 IEGLGRQLYPDLDLWSTAQPFL 433
>sp|B1XWR5|UBIB_LEPCP Probable ubiquinone biosynthesis protein UbiB OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB
PE=3 SV=1
Length = 522
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 194/397 (48%), Gaps = 26/397 (6%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D+I DI+ L++L D++PPFP ++ + + LG P+E F+ +PVA+
Sbjct: 68 GQVLSTRRDLIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLGRPIEEVFASFDADPVAS 127
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYA 278
AS QV+ G DG VAVKV RPN+ +++ D+ +LR+ L++++ R+ R
Sbjct: 128 ASIAQVHFGVLHDGREVAVKVLRPNVLNIIEADLALLRVAAAWLERLSPDGRRLRPREVV 187
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E L ELD EAANA++ + + I +P++ LS VL ME M G P
Sbjct: 188 AEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLSSAEVLVMERMHG-VPIS 246
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY 398
I + +D + L GV Q+ G HAD HPGN+
Sbjct: 247 QIETLRAAGID----------------IPKLARDGVTIFFTQVFRDGFFHADMHPGNIMV 290
Query: 399 TSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNT 454
+++ G+ LDFG++ ++ + + + + + D++ + E V P +
Sbjct: 291 STAPATFGRYIALDFGIVGTLDSRDKEYLAQNFLAFFRRDYRRVAELHIESGWV-PASTR 349
Query: 455 LRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGL 514
+ A+ E F + D+ +VL +++ + +++ + P L+ ++L ++EGL
Sbjct: 350 VDELEGAVRAVCEPHFDRPLKDISLGQVLLRLFQTSRRFNVEIQPQLVLLQKTLLNVEGL 409
Query: 515 AIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSV 551
DP ++ A PF +++ + E V R +L S+
Sbjct: 410 GRQLDPELDLWQTAKPF-LERWMNEQ-VGWRALLGSI 444
>sp|Q3KJC7|UBIB_PSEPF Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ubiB PE=3 SV=1
Length = 534
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 182/381 (47%), Gaps = 30/381 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF +++K+IEE+LG + FS EP+A+
Sbjct: 74 GQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKKISEVFSRFDVEPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRL---- 276
AS QV+ G V VKV RP L+ ++ +D+ L I L + K +D RL
Sbjct: 134 ASVAQVHAAQLKTGEEVVVKVIRPGLKPIIAQDLAWLFI---LARAAEKVSADARLLHPV 190
Query: 277 -YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGES 335
+ K + ELD EAANAS+ + + P ++VP+V+ R +VL ME + G
Sbjct: 191 DVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIQ 250
Query: 336 PTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGN 395
TDL +L+ Q+ D K L +GVE Q+ HAD HPGN
Sbjct: 251 VTDLATLAD-------------QRTDMKM----LAERGVEIFFTQVFRDSFFHADMHPGN 293
Query: 396 LRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPG 451
+ ++ S Q +D G++ + + Q + ++ D++ + + V P
Sbjct: 294 IFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-PA 352
Query: 452 TNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASL 511
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L ++
Sbjct: 353 ETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNI 412
Query: 512 EGLAIAGDPHFKTFEAAYPFV 532
EGL P + A PF+
Sbjct: 413 EGLGRQLYPDLDLWNTAQPFL 433
>sp|A1U669|UBIB_MARAV Probable ubiquinone biosynthesis protein UbiB OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB
PE=3 SV=1
Length = 547
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 26/379 (6%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D++++L +L D++PPFP A IIE+ LG+PV F+ S +P+A+
Sbjct: 70 GQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLGAPVSELFAEFSPDPMAS 129
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---AKRKSDLRLY 277
AS QV+ + +G V VKV RP + V+ +D+ ++ + GLL+K KR + +
Sbjct: 130 ASVAQVHAATLPNGQKVVVKVLRPGIEKVIRQDLGLMYLMAGLLEKYWSEGKRLHPVEVV 189
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
AD + ELD EAANAS+ + + P I++P + +RK VL ME + G
Sbjct: 190 AD-YDSTIHDELDLQREAANASQLRRNFENSPLIYIPFIDWDYTRKSVLVMERIHGIPIA 248
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
D+ +L +K R+ L KGVE Q+ HAD HPGN+
Sbjct: 249 DVPAL---------------EKAGVNMRV--LAEKGVEIFFTQVFRDSFFHADMHPGNIF 291
Query: 398 YTSSG----QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
S + +DFG++ + Q + +++ D++ + + V P T
Sbjct: 292 VDVSNPADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQLHIQSGWVPPETR 351
Query: 454 TLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEG 513
+ + E F+ + D+ F L +++ A +++ + P L+ ++L ++EG
Sbjct: 352 VNEFEAAIR-TVCEPIFERPLKDISFGHFLLRLFQTARRFNMEVQPQLVLLQKTLLNVEG 410
Query: 514 LAIAGDPHFKTFEAAYPFV 532
L P + A PF+
Sbjct: 411 LGRQLYPDLDLWSTAQPFL 429
>sp|Q7NZD1|UBIB_CHRVO Probable ubiquinone biosynthesis protein UbiB OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiB PE=3 SV=1
Length = 508
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 192/408 (47%), Gaps = 30/408 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ + + L+ L D++PPF IA +++E LG VE F +PVA+
Sbjct: 67 GQVLSTRRDLLPPEYADELALLQDRVPPFDGDIARQVVERSLGRKVEELFVDFDLKPVAS 126
Query: 221 ASFGQVYRG-----STLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL- 274
AS QV++ G VAVKV RP + V+ +D+ ++R G ++K+ L
Sbjct: 127 ASVAQVHKAWLRQPDGGRGREVAVKVLRPGILPVIEQDLSLMRTLAGWVEKLFADGKRLK 186
Query: 275 -RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG 333
R E K L ELD EAANAS+ + + + VP+VF S + VLT+EWM G
Sbjct: 187 PREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYDYSSREVLTLEWMHG 246
Query: 334 ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHP 393
P I + VD L L GVE Q+ G HAD HP
Sbjct: 247 -IPVGQIERLREAGVD----------------LQKLSRFGVEIFFTQVFRHGFFHADMHP 289
Query: 394 GNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
GN+ + G+ LDFG++ + + + + + N D+ + + E V T
Sbjct: 290 GNIFVAADGRYIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYHRVATAHIESGWVPRDTR 349
Query: 454 TLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEG 513
+ + + E F+ + ++ F VL +++ + +++ + P L+ ++L ++EG
Sbjct: 350 AEELEAAVR-TVCEPIFEKPLSEISFGMVLLRLFETSRRFNVEIQPQLVLLQKTLLNIEG 408
Query: 514 LAIAGDPHFKTFEAAYPFVIQKLLTENSVATRKILHSVVFNKKKEFQW 561
L DP ++ A PF + K + E + R +L ++ K + QW
Sbjct: 409 LGRQLDPELDLWDTAKPF-LTKWMNEQ-IGWRGLLRTL---KHEAPQW 451
>sp|B0KM38|UBIB_PSEPG Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain GB-1) GN=ubiB PE=3 SV=1
Length = 540
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ +DI+ L L D++PPF A+ +IEE+LG+ V FS EP+A+
Sbjct: 75 GQLLSTRRDLLPTDIADELMLLQDRVPPFDPQKAVALIEEQLGAKVGEVFSRFDVEPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS--DLRLYA 278
AS QV+ G V VKV RP L+ V+ +D+ L L+ K A+R S RL+
Sbjct: 135 ASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDL----AWLFLIAKAAERASADARRLHP 190
Query: 279 DEL----GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
E+ K + ELD EAANAS+ + + ++VP+V+ L R +VL ME + G
Sbjct: 191 VEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERIYGV 250
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+++L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 251 PVTDMVTLAD-------------QRTDMKL----LAERGVEVFFTQVFRDSFFHADMHPG 293
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S Q +D G++ + + Q + +++ D++ + + V
Sbjct: 294 NIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPA 353
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 354 HTKVNEFEAAIR-TVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPDLDLWSTAKPFL 434
>sp|Q1I3S8|UBIB_PSEE4 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
entomophila (strain L48) GN=ubiB PE=3 SV=1
Length = 537
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 186/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ +DI+ L L D++PPF A+ +IEE+LG+ V FS EP+A+
Sbjct: 75 GQLLSTRRDLLPTDIADELMLLQDRVPPFDPQHAVALIEEQLGAKVGEVFSRFDVEPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS--DLRLYA 278
AS QV+ G V VKV RP L+ V+ +D+ L L+ K A+R S RL+
Sbjct: 135 ASVAQVHAARLKSGEEVVVKVVRPGLKPVIAQDL----AWLFLIAKAAERASADARRLHP 190
Query: 279 DEL----GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
E+ K + ELD EAANAS+ + + ++VP+V+ L R +VL ME + G
Sbjct: 191 VEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERIYGV 250
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ +L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 251 PVTDMATLAD-------------QRTDMKM----LAERGVEVFFTQVFRDSFFHADMHPG 293
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S Q +D G++ + + Q + +++ D++ + + V
Sbjct: 294 NIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAQLHIDSGWVPA 353
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 354 QTKVNEFEAAIR-TVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 413 IEGLGRQLYPDLDLWSTAKPFL 434
>sp|C3K8U2|UBIB_PSEFS Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain SBW25) GN=ubiB PE=3 SV=1
Length = 534
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 183/382 (47%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF +MK+IEE+LG + FS +P+A+
Sbjct: 74 GQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMKLIEEQLGKKISEVFSRFDVDPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS-DLRL--- 276
AS QV+ G V VKV RP L+ ++ +D+ L I L + A+R S D RL
Sbjct: 134 ASVAQVHAAQLKTGEEVVVKVIRPGLKPIIGQDLAWLFI----LARAAERFSADARLLHP 189
Query: 277 --YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
+ K + ELD EAANAS+ + + P ++VP+V+ R +VL ME + G
Sbjct: 190 VDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGV 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TDL +L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 QVTDLATLAD-------------QRTDMKM----LAERGVEIFFTQVFRDSFFHADMHPG 292
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S Q +D G++ + + Q + ++ D++ + + V P
Sbjct: 293 NIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-P 351
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 352 AETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 412 IEGLGRQLYPDLDLWNTAQPFL 433
>sp|B2SX38|UBIB_BURPP Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1
Length = 525
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 184/391 (47%), Gaps = 46/391 (11%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L++L DQ+PPF ++A++++E LG+PV+ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDVLFDDFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRL 276
AS QV+ + G VAVKV RPN+ V+ D L LL+ IA RL
Sbjct: 127 ASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSD-------LALLRDIAVWAE--RL 177
Query: 277 YAD-----------ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRV 325
+AD E K L ELD EAAN S+ + + + + VP+++ V
Sbjct: 178 WADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTV 237
Query: 326 LTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG 385
L ME MVG P + + VD + L +GVE Q+ G
Sbjct: 238 LVMERMVG-VPISQVETLRAAGVD----------------IPKLAREGVEIFFTQVFRDG 280
Query: 386 ILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS 441
HAD HPGN++ + G+ LDFG++ + + + + + D+ +
Sbjct: 281 FFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATL 340
Query: 442 LTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYY 501
E V P T + + A+ E F + D+ +VL +++S + +++ + P
Sbjct: 341 HLESGWVPPTTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQL 399
Query: 502 TLVLRSLASLEGLAIAGDPHFKTFEAAYPFV 532
L+ +++ ++EGL + DP ++ A P++
Sbjct: 400 VLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430
>sp|B3PH50|UBIB_CELJU Probable ubiquinone biosynthesis protein UbiB OS=Cellvibrio
japonicus (strain Ueda107) GN=ubiB PE=3 SV=1
Length = 552
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 187/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTRPD++ +DI L+ L D + PF + +I+E LG+ V F+ + EP+A+
Sbjct: 67 GQLLSTRPDLVPADIVLELNHLQDNVTPFSKGEFQRIVESSLGASVAEVFASFNIEPLAS 126
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDI-YILRIGLGLLQKI--AKRKSDLRLY 277
AS QV+ DG V +KV RP + V+ +DI +LR+ + KR + +
Sbjct: 127 ASVAQVHTAVLKDGREVVIKVIRPGIDKVIAQDIALLLRVARWVENNTLDGKRLHPVEIV 186
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
D + ELD EAAN S+ + + P ++VP+V+ +R VL ME + G T
Sbjct: 187 ED-YRTTIFDELDLQREAANGSQLRRNFLNSPLLYVPEVYWEYTRTNVLVMERIYGIPVT 245
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL- 396
DL +L+ Q+ D K L +GVE Q+ E HAD HPGN+
Sbjct: 246 DLAALNA-------------QQTDMK----KLAERGVEIFFTQVFEHNFFHADMHPGNIF 288
Query: 397 ---RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN 453
+ S+ Q +D ++ + R Q+ + +++ + D++ + E V +
Sbjct: 289 VAHEHPSAPQYIAVDMAIVGSLTRADQYYLARNLLAMFRRDYRQVAELHVESGWV---PS 345
Query: 454 TLRVTMDLEDALGEVE---FKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
+RV +LE A+ V F+ + ++ F++VL ++ A ++ + P L+ ++L +
Sbjct: 346 HVRVE-ELEAAVRTVCEPIFEKPLKEISFAQVLLNLFRTARRFEMEVQPQLVLLQKTLLN 404
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A+PF+
Sbjct: 405 IEGLGRQLYPDLDLWATAHPFL 426
>sp|Q145N7|UBIB_BURXL Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
xenovorans (strain LB400) GN=ubiB PE=3 SV=1
Length = 525
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 184/391 (47%), Gaps = 46/391 (11%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L++L DQ+PPF ++A+ ++E+ LG+PV+ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVLFDDFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRL 276
AS QV+ + G VAVKV RPN+ V+ D L LL+ IA RL
Sbjct: 127 ASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSD-------LALLRDIAVWAE--RL 177
Query: 277 YAD-----------ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRV 325
+AD E K L ELD EAAN S+ + + + + VP+++ V
Sbjct: 178 WADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTV 237
Query: 326 LTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETG 385
L ME MVG P + + VD + L +GVE Q+ G
Sbjct: 238 LVMERMVG-VPISQVETLRAAGVD----------------IPKLAREGVEIFFTQVFRDG 280
Query: 386 ILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS 441
HAD HPGN++ + G+ LDFG++ + + + + + D+ +
Sbjct: 281 FFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATL 340
Query: 442 LTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYY 501
E V P T + + A+ E F + D+ +VL +++S + +++ + P
Sbjct: 341 HLESGWVPPTTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQL 399
Query: 502 TLVLRSLASLEGLAIAGDPHFKTFEAAYPFV 532
L+ +++ ++EGL + DP ++ A P++
Sbjct: 400 VLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430
>sp|B2JCV1|UBIB_BURP8 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1
Length = 527
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 186/392 (47%), Gaps = 48/392 (12%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L++L DQ+PPF ++A+ IIE+ LG+PV++ F PVA+
Sbjct: 67 GQVLSTRRDLLRPDIATELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTIFDDFERVPVAS 126
Query: 221 ASFGQVYRGSTLD-----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR 275
AS QV+ +TL G VAVKV RPN+ V+ D L LL+ IA R
Sbjct: 127 ASIAQVH-FATLKIGQHAGKQVAVKVLRPNMLPVIDSD-------LALLRDIAVWAE--R 176
Query: 276 LYAD-----------ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKR 324
L+AD E K L ELD EAAN S+ + + + + VP+++
Sbjct: 177 LWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEYCTAN 236
Query: 325 VLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLET 384
VL ME MVG P + + VD + L +GVE Q+
Sbjct: 237 VLVMERMVG-VPISQVDTLRVAGVD----------------IPKLAREGVEIFFTQVFRD 279
Query: 385 GILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVH 440
G HAD HPGN++ + G+ LDFG++ + + + + + D+ +
Sbjct: 280 GFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVAT 339
Query: 441 SLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPY 500
E V P T + A+ E F + D+ +VL +++S + +++ + P
Sbjct: 340 LHLESGWV-PATTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQ 398
Query: 501 YTLVLRSLASLEGLAIAGDPHFKTFEAAYPFV 532
L+ +++ ++EGL + DP ++ A P++
Sbjct: 399 LVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430
>sp|A5WA47|UBIB_PSEP1 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1
Length = 540
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 184/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF A+ +IEE+LG+ V FS EP+A+
Sbjct: 75 GQLLSTRRDLLPPDIADELMLLQDRVPPFDPKKAVALIEEQLGAKVGEVFSRFDVEPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS--DLRLYA 278
AS QV+ G V VKV RP L+ V+ +D+ L L+ K A+R S RL+
Sbjct: 135 ASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDL----AWLFLIAKAAERASADARRLHP 190
Query: 279 DEL----GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
E+ K + ELD EAANAS+ + + ++VP+V+ L R +VL ME + G
Sbjct: 191 VEIVGDYEKTIYDELDLLREAANASQLRRNFEDSELMYVPQVYWDLCRPKVLVMERIYGV 250
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ +L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 251 PVTDMATLAD-------------QRTDMKL----LAERGVEVFFTQVFRDSFFHADMHPG 293
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S Q +D G++ + + Q + ++ D++ + + V
Sbjct: 294 NIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPA 353
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 354 NTKVNEFEAAIR-TVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 412
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A P++
Sbjct: 413 IEGLGRQLYPDLDLWSTAKPYL 434
>sp|C1DHS4|UBIB_AZOVD Probable ubiquinone biosynthesis protein UbiB OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1
Length = 537
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 24/378 (6%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPF ++ +IEE+LG+ V+ F+ EP+A+
Sbjct: 75 GQILSTRRDLLPEDIADELTWLQDRVPPFNPQQSVALIEEQLGARVDEAFARFDSEPLAS 134
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRL--YA 278
AS QV+ G V VKV RP L+ V+ +D+ L + L ++ + L L
Sbjct: 135 ASVAQVHAAQLKTGEEVVVKVVRPGLKAVIRQDLAWLYLFARLAERASTEARRLHLVDVV 194
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
+ K + ELD EAANAS+ + + P ++VP+++ R +VL ME + G TD
Sbjct: 195 SDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQIYWDWCRPKVLVMERIYGVPVTD 254
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL-- 396
L +L G+ L L +GVE Q+ HAD HPGN+
Sbjct: 255 LAALVD----QGTDLKL-------------LAERGVEIFFTQVFRDSFFHADMHPGNIFV 297
Query: 397 --RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNT 454
R Q +D G++ + + Q + +++ D++ + + V T
Sbjct: 298 STRQPWDPQYIAIDCGIVGSLTPQDQDYLARNLLAFFKRDYRKVAQLHIDSGWVPADTQV 357
Query: 455 LRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLEGL 514
+ + E F+ + D+ F ++L +++ A +++ + P L+ ++L ++EGL
Sbjct: 358 NEFEAAIR-TVCEPIFEKPLKDISFGQLLLRLFQTARRFNMEVQPQLVLLQKTLLNIEGL 416
Query: 515 AIAGDPHFKTFEAAYPFV 532
P + A PF+
Sbjct: 417 GRQLYPELDLWTTAKPFL 434
>sp|Q4ZZG5|UBIB_PSEU2 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. syringae (strain B728a) GN=ubiB PE=3 SV=1
Length = 539
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF + +A+K+IEE+LG+ + FS E+P+A+
Sbjct: 74 GQLLSTRRDLLPEDIADELMLLQDRVPPFDQQLAIKLIEEQLGARICDVFSRFDEKPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS-DLRLYAD 279
AS QV+ G V VKV RP L+ ++ +D+ L I L ++A+R S D RL
Sbjct: 134 ASVAQVHAACLKTGEEVVVKVVRPGLKPIIGQDLAWLFI----LARMAERVSADARLLHP 189
Query: 280 -----ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
+ K + ELD EAANAS+ + + ++VP+V+ R +VL ME + G
Sbjct: 190 VQVVMDYEKTIYDELDLLREAANASQLRRNFEGSDLLYVPQVYWDWCRPKVLVMERIYGL 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 QVTDMAGLAD-------------QRTDMKL----LAERGVEIFFTQIFRDSFFHADMHPG 292
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ + + +D G++ + + Q + ++ D++ + + V P
Sbjct: 293 NIFVSTVNPWAPKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-P 351
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 352 AETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A P++
Sbjct: 412 IEGLGRQLYPELDLWSTAQPYL 433
>sp|Q87CN1|UBIB_XYLFT Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1
Length = 552
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 181/388 (46%), Gaps = 33/388 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI L L D++ PF A IIE LG VES F+ P+A+
Sbjct: 70 GQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLAS 129
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL--RLYA 278
AS QV+ + D V VKV RP++ H + DI +L+ L++ + R
Sbjct: 130 ASISQVHAATLHDRRAVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIV 189
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E+ L ELD E ANAS + I+VP+V + +RVLT+E M G P+D
Sbjct: 190 AEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLERMYG-IPSD 248
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL-- 396
I+L S +D + L +KG+ Q+ HAD H GN+
Sbjct: 249 DIALLDASGIDRKA----------------LSSKGIRVFYTQVFRDNFFHADAHSGNIWV 292
Query: 397 ----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
S+ + LDFG++ ++ +K Q+ + + + I + D++ + E + P
Sbjct: 293 DSDPARKSNPRFIVLDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAGWIPPHV 352
Query: 453 NTLRVTMDLEDA---LGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLA 509
+LE A + E F + + + V+ K++ +A +Y + P L+ ++L
Sbjct: 353 R----IEELEAAARSVCEPYFTRPLSQISLAEVMMKLFHVARRYQLTLQPQLILLQKTLL 408
Query: 510 SLEGLAIAGDPHFKTFEAAYPFVIQKLL 537
++EG+ DP + A P V++++L
Sbjct: 409 NIEGVGRQLDPELDIWVVARP-VLERIL 435
>sp|B2I583|UBIB_XYLF2 Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M23) GN=ubiB PE=3 SV=1
Length = 552
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 181/388 (46%), Gaps = 33/388 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI L L D++ PF A IIE LG VES F+ P+A+
Sbjct: 70 GQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLAS 129
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL--RLYA 278
AS QV+ + D V VKV RP++ H + DI +L+ L++ + R
Sbjct: 130 ASISQVHAATLHDRRAVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIV 189
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E+ L ELD E ANAS + I+VP+V + +RVLT+E M G P+D
Sbjct: 190 AEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLERMYG-IPSD 248
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL-- 396
I+L S +D + L +KG+ Q+ HAD H GN+
Sbjct: 249 DIALLDASGIDRKA----------------LSSKGIRVFYTQVFRDNFFHADAHSGNIWV 292
Query: 397 ----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
S+ + LDFG++ ++ +K Q+ + + + I + D++ + E + P
Sbjct: 293 DSDPARKSNPRFIVLDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAGWIPPHV 352
Query: 453 NTLRVTMDLEDA---LGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLA 509
+LE A + E F + + + V+ K++ +A +Y + P L+ ++L
Sbjct: 353 R----IEELEAAARSVCEPYFTRPLSQISLAEVMMKLFHVARRYQLTLQPQLILLQKTLL 408
Query: 510 SLEGLAIAGDPHFKTFEAAYPFVIQKLL 537
++EG+ DP + A P V++++L
Sbjct: 409 NIEGVGRQLDPELDIWVVARP-VLERIL 435
>sp|Q9PCE8|UBIB_XYLFA Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain 9a5c) GN=ubiB PE=3 SV=1
Length = 552
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 33/388 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI L L D++ PF A IIE LG VES F+ P+A+
Sbjct: 70 GQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLAS 129
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR--LYA 278
AS QV+ + DG V VKV RP++ H + DI +L+ L++ +R
Sbjct: 130 ASISQVHAATLHDGREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPCEIV 189
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E+ L ELD E ANAS + I+VP+V + ++VLT+E M G P+D
Sbjct: 190 AEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAEQVLTLERMYG-IPSD 248
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL-- 396
I+L S +D + L +KG+ Q+ HAD H GN+
Sbjct: 249 DIALLDASGIDRKA----------------LSSKGIRVFYTQVFRDNFFHADAHSGNIWV 292
Query: 397 ----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
S+ + LDFG++ ++ +K Q+ + + + I + D++ + E + P
Sbjct: 293 DSDPARKSNPRFIALDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAGWIPPHV 352
Query: 453 NTLRVTMDLEDA---LGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLA 509
+LE A + E F + + + VL K++ +A +Y + P L+ ++L
Sbjct: 353 R----IEELEAAARSVCEPYFTRPLSQISLAEVLMKLFHVARRYQLTLQPQLILLQKTLL 408
Query: 510 SLEGLAIAGDPHFKTFEAAYPFVIQKLL 537
++EG+ DP + A P V++++L
Sbjct: 409 NIEGVGRQLDPELDIWVVARP-VLERIL 435
>sp|Q4KJL4|UBIB_PSEF5 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiB PE=3
SV=1
Length = 534
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 179/381 (46%), Gaps = 30/381 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF ++ +IE +LG + FS EP+A+
Sbjct: 74 GQILSTRRDLLPEDIADELMLLQDRVPPFDSQKSVALIEAQLGKKISDVFSRFDIEPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRL---- 276
AS QV+ G V VKV RP L+ ++ +D+ L I L + K +D RL
Sbjct: 134 ASVAQVHAAKLKTGEEVVVKVIRPGLKPIIAQDLAWLFI---LARAAEKLSADARLLHPV 190
Query: 277 -YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGES 335
+ K + ELD EAANAS+ + + P ++VP+V+ R +VL ME + G
Sbjct: 191 DVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGIQ 250
Query: 336 PTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGN 395
TDL +L+ Q+ D K L +GVE Q+ HAD HPGN
Sbjct: 251 VTDLATLAD-------------QRTDMKM----LAERGVEIFFTQVFRDSFFHADMHPGN 293
Query: 396 LRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPG 451
+ ++ S Q +D G++ + + Q + ++ D++ + + V P
Sbjct: 294 IFVSTVQPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-PA 352
Query: 452 TNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASL 511
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L ++
Sbjct: 353 ETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNI 412
Query: 512 EGLAIAGDPHFKTFEAAYPFV 532
EGL P + A PF+
Sbjct: 413 EGLGRQLYPDLDLWNTAQPFL 433
>sp|C5CWY2|UBIB_VARPS Probable ubiquinone biosynthesis protein UbiB OS=Variovorax
paradoxus (strain S110) GN=ubiB PE=3 SV=1
Length = 521
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 205/453 (45%), Gaps = 53/453 (11%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L+ L D++PPFP ++A+ IE PV F E P+A+
Sbjct: 68 GQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIAS 127
Query: 221 ASFGQVYRGS--TLDGSI--VAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL-- 274
AS QV+ + T +G + VAVKV RP++R V+ +D+ ++ + G ++K++ L
Sbjct: 128 ASIAQVHFATIRTDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVEKLSPDGKRLKP 187
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAANA++ + + + + +P++F V+ ME M G
Sbjct: 188 REVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHPEVIVMERMNG- 246
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L GV Q+ G HAD HPG
Sbjct: 247 VPIAQLDRLRAAGVD----------------IPKLARDGVTIFFTQVFRDGFFHADMHPG 290
Query: 395 NLRYT----SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + + G+ LDFG++ + + + + V D++ + E V
Sbjct: 291 NIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHLESGWVPE 350
Query: 451 GTNTLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 507
GT +LE A+ E F + ++ VL +++ + ++H + P L+ ++
Sbjct: 351 GTR----IDELEGAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKT 406
Query: 508 LASLEGLAIAGDPHFKTFEAAYPF-------------VIQKLLTENSVATR------KIL 548
L ++EGL DP + A PF + Q+L E + ++L
Sbjct: 407 LLNIEGLGRQLDPELDLWHTAKPFLEKWMVDQIGPKKLFQQLKAEAPRYAKLLPELPRLL 466
Query: 549 HSVVFNKKKEFQWQRLSLFLRVGATRKGLQQVI 581
H + N+ + + + L L T + LQ +I
Sbjct: 467 HDFLENRPADHRRELLELLAAQKRTNRLLQTII 499
>sp|Q63X97|UBIB_BURPS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain K96243) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|A3N5V1|UBIB_BURP6 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 668) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|Q3JVZ2|UBIB_BURP1 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|A3NRJ7|UBIB_BURP0 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|A1V750|UBIB_BURMS Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain SAVP1) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|Q62MP2|UBIB_BURMA Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain ATCC 23344) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|A2S8L4|UBIB_BURM9 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|A3MNU1|UBIB_BURM7 Probable ubiquinone biosynthesis protein UbiB OS=Burkholderia
mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1
Length = 525
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 29/390 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D + L++L DQ+PPF ++A+ I+E+ LG+ ++ F PVA+
Sbjct: 67 GQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARIDVLFDEFERVPVAS 126
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI--AKRKSDL 274
AS QV+ + G VAVKV RPN+ V+ D+ ++R +++ R+
Sbjct: 127 ASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIATWAERLWADGRRLKP 186
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAAN S+ + + + + VP++F S VL ME M G
Sbjct: 187 REVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTG- 245
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
P + + VD + L +GVE Q+ G HAD HPG
Sbjct: 246 VPISQVDTLRAAGVD----------------IPKLAREGVEIFFTQVFRDGFFHADMHPG 289
Query: 395 NLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N++ + G+ LDFG++ + + + + + D+ + E V P
Sbjct: 290 NIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPP 349
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + A+ E F + D+ +VL +++S + +++ + P L+ +++ +
Sbjct: 350 DTRVEELESAIR-AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLN 408
Query: 511 LEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+EGL + DP ++ A P+ +++ +TE
Sbjct: 409 VEGLGRSLDPELDLWKTAKPY-LERWMTEQ 437
>sp|B1J2S6|UBIB_PSEPW Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas putida
(strain W619) GN=ubiB PE=3 SV=1
Length = 539
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 185/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ +DI+ L L D++PPF A+ +IE +LG+ V FS EP+A+
Sbjct: 74 GQLLSTRRDLLPTDIADELMLLQDRVPPFDPKQAVALIESQLGAKVGEVFSRFDVEPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS--DLRLYA 278
AS QV+ G V VKV RP L+ V+ +D+ L L+ K A+R S RL+
Sbjct: 134 ASVAQVHAARLKTGEEVVVKVVRPGLKPVIAQDL----AWLFLIAKGAERASADARRLHP 189
Query: 279 DEL----GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
E+ K + ELD EAANAS+ + + ++VP+V+ L R +VL ME + G
Sbjct: 190 VEIVGDYEKTIYDELDLLREAANASQLRRNFEGSELMYVPQVYWDLCRPKVLVMERIYGV 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ +L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 PVTDMATLAD-------------QRTDMKL----LAERGVEVFFTQVFRHSFFHADMHPG 292
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S Q +D G++ + + Q + +++ D++ + + V
Sbjct: 293 NIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLIAFFKRDYRRVAELHIDSGWVPA 352
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
T + + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 353 HTKVNEFEAAIR-TVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A PF+
Sbjct: 412 IEGLGRQLYPDLDLWSTAKPFL 433
>sp|Q87UZ0|UBIB_PSESM Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=ubiB PE=3 SV=1
Length = 539
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 185/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF + +A+K+IEE+LG+ + FS E P+A+
Sbjct: 74 GQLLSTRRDLLPEDIADELMLLQDRVPPFDQQVAIKLIEEQLGARICDVFSRFDETPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS-DLRLYAD 279
AS QV+ G V VKV RP L+ ++ +D+ L I L ++A+R S D RL
Sbjct: 134 ASVAQVHAACLKTGEEVVVKVVRPGLKPIIGQDLAWLFI----LARMAERVSADARLLHP 189
Query: 280 -----ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
+ K + ELD EAAN+S+ + + ++VP+V+ R +VL ME + G
Sbjct: 190 VQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWDWCRPKVLVMERIYGL 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 QVTDMAGLAD-------------QRTDMKM----LAERGVEIFFTQIFRDSFFHADMHPG 292
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ + + +D G++ + + Q + ++ D++ + + V P
Sbjct: 293 NIFVSTVNPWAPKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-P 351
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 352 AETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A P++
Sbjct: 412 IEGLGRQLYPELDLWSTAQPYL 433
>sp|A4STK9|UBIB_AERS4 Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
salmonicida (strain A449) GN=ubiB PE=3 SV=1
Length = 546
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 185/380 (48%), Gaps = 27/380 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI++ L+ L D++PPF A IEE LG PVE+ F E P+A+
Sbjct: 72 GQMLSTRRDLLPPDIAEELAMLQDRVPPFCGQAARLKIEESLGCPVETLFDDFDETPLAS 131
Query: 221 ASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR--LY 277
AS QV+ G +G + +KV RP++ V+ D+ +++ L+ + + + LR
Sbjct: 132 ASIAQVHTGRLKENGREIVIKVIRPDIEPVIEADLRLMQTLARLVARFVPQSARLRPIEV 191
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+E K ++ EL+ EAANA + + + + ++VP+VF R+ VL ME + G +
Sbjct: 192 VEEYRKTILDELNLMREAANAIQLRRNFTGSDALYVPEVFTEHCREHVLVMERIYGIPVS 251
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
D+ +L +G++ L L +GVE Q+ HAD HPGN+
Sbjct: 252 DIPALEA----NGTNMKL-------------LAERGVEVFFTQVFRDSFFHADMHPGNIF 294
Query: 398 YTSSGQ-----IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
+ IG +D G++ + R+ + + + + N D++ + E V P T
Sbjct: 295 VSYEHPDNPLWIG-IDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDT 353
Query: 453 NTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLE 512
+ L + F+ + ++ F VL +++ A +++ + P L+ ++L +E
Sbjct: 354 KVDEFEFAIRTVLEPI-FEKPLSEISFGHVLLNLFNTARRFNMAVQPQLVLLQKTLLYVE 412
Query: 513 GLAIAGDPHFKTFEAAYPFV 532
GL P ++ A P++
Sbjct: 413 GLGRQLYPQLDLWQTAKPYL 432
>sp|Q48PJ6|UBIB_PSE14 Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=ubiB PE=3 SV=1
Length = 539
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 32/382 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI+ L L D++PPF + +A+ +IEE+LG+ + FS E P+A+
Sbjct: 74 GQLLSTRRDLLPEDIADELMLLQDRVPPFDQQVAINLIEEQLGARICDVFSRFDETPLAS 133
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS-DLRLYAD 279
AS QV+ G V VKV RP L+ V+ +D+ L I L ++A+R S D RL
Sbjct: 134 ASVAQVHAACLKTGEEVVVKVVRPGLKPVIGQDLAWLFI----LARMAERVSADARLLHP 189
Query: 280 -----ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
+ K + ELD EAAN+S+ + + ++VP+V+ R +VL ME + G
Sbjct: 190 VQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWDWCRPKVLVMERIYGL 249
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
TD+ L+ Q+ D K L +GVE Q+ HAD HPG
Sbjct: 250 QVTDMAGLAD-------------QRTDMKL----LAERGVEIFFTQIFRDSFFHADMHPG 292
Query: 395 NLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ ++ S + +D G++ + + Q + ++ D++ + + V P
Sbjct: 293 NIFVSTVNPWSPKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWV-P 351
Query: 451 GTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLAS 510
L + E F+ + D+ F +VL +++ A +++ + P L+ ++L +
Sbjct: 352 AETKLNEFEAAIRTVCEPIFEKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLN 411
Query: 511 LEGLAIAGDPHFKTFEAAYPFV 532
+EGL P + A P++
Sbjct: 412 IEGLGRQLYPDLDLWSTAQPYL 433
>sp|B0U2R2|UBIB_XYLFM Probable ubiquinone biosynthesis protein UbiB OS=Xylella fastidiosa
(strain M12) GN=ubiB PE=3 SV=1
Length = 552
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 183/388 (47%), Gaps = 33/388 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI L L D++ PF A IIE LG VES F+ P+A+
Sbjct: 70 GQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLAS 129
Query: 221 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL--RLYA 278
AS QV+ + D V VKV RP++ H + DI +L+ L++ + R
Sbjct: 130 ASISQVHAATLHDRREVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIV 189
Query: 279 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD 338
E+ L ELD E ANAS + I+VP+V + +RVLT+E M G P+D
Sbjct: 190 AEIETTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWSHTAERVLTLERMYG-IPSD 248
Query: 339 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNL-- 396
I+L S +D + L +KG+ Q+ HAD H GN+
Sbjct: 249 DIALLDASGIDRKA----------------LSSKGIRVFYTQVFRDNFFHADAHSGNIWV 292
Query: 397 ----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
S+ + LDFG++ ++ +K Q+ + + + I + D++ + E +
Sbjct: 293 DSDPARKSNPRFIALDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAGWI---P 349
Query: 453 NTLRVTMDLEDA---LGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLA 509
+R+ +LE A + E F + + + VL K++ +A +Y + P L+ ++L
Sbjct: 350 QHVRIE-ELEAAARSVCEPYFTRPLSQISLAEVLMKLFHVARRYQLTLQPQLILLQKTLL 408
Query: 510 SLEGLAIAGDPHFKTFEAAYPFVIQKLL 537
++EG+ DP + A P V++++L
Sbjct: 409 NIEGVGRQLDPELDIWVVARP-VLERIL 435
>sp|Q9CKD4|UBIB_PASMU Probable ubiquinone biosynthesis protein UbiB OS=Pasteurella
multocida (strain Pm70) GN=ubiB PE=3 SV=1
Length = 527
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 41/399 (10%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
+GQ LSTR D+ DI+ L+ L DQ+ PF IA IE+ LG+P+E++F +E +A
Sbjct: 71 LGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETWFDEFNETALA 130
Query: 220 AASFGQVYRG----------STLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK 269
+AS QV+ + L G V +KV RPN++ ++ D+ ++ + +I
Sbjct: 131 SASIAQVHTAKFKQNAPHLENRLAGKEVVLKVLRPNIQQMINADLSLMYKVASWIPRIKA 190
Query: 270 RKSDLR--LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLT 327
LR E K L ELD E ANA + + + P +++P++++ + V+
Sbjct: 191 EGRRLRPVEVVREYEKNLRDELDLRREMANAIQLRANFENSPMLYIPEMYKQFCHQTVIV 250
Query: 328 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL 387
ME + G I +S + + T++ KL L +GV+ Q+
Sbjct: 251 MERIYG------IPVSNIEELHANGTNM---KL--------LAERGVQVFFTQVFRDSFF 293
Query: 388 HADPHPGNL----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT 443
HAD HPGN+ + Q +D G++ R+ + + S V N D++ +
Sbjct: 294 HADMHPGNIFVNRAHPDDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYR----RVA 349
Query: 444 EMDVVRPGTNTLRVTMDLEDALGEVE---FKDGIPDVKFSRVLGKIWSIALKYHFRMPPY 500
EM V T D E A EV F + ++ F VL ++++A +Y+ + P
Sbjct: 350 EMHVASGWTPKDTNIDDFEQAFREVCEPIFAKPLSEISFGHVLLNLFNVAREYNMEVQPQ 409
Query: 501 YTLVLRSLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTE 539
L+ ++L +EGL P ++ A PF +QK L E
Sbjct: 410 LVLLQKTLLYIEGLGRQLYPQLDLWDTAKPF-LQKWLDE 447
>sp|Q0I208|UBIB_HAES1 Probable ubiquinone biosynthesis protein UbiB OS=Haemophilus somnus
(strain 129Pt) GN=ubiB PE=3 SV=1
Length = 544
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 35/394 (8%)
Query: 160 VGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA 219
+GQ LSTR D+ ++I+ L+ L D + F IA + IE+ LGS +E++F+ E +A
Sbjct: 71 LGQMLSTRRDLFPAEIADELALLQDNVEAFSGKIARQQIEQALGSSLENWFTDFDENALA 130
Query: 220 AASFGQVYRGSTLDGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR 275
+AS QV+ G V +KV RPN++ + D+ + GLL K+ + LR
Sbjct: 131 SASIAQVHTAKLKLGEEQEKEVVIKVLRPNIQPQIEADLSWMYKLAGLLPKLFREGYRLR 190
Query: 276 LYA--DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG 333
E K L ELD +E ANA + +E+ P +++PK++ K V+ ME + G
Sbjct: 191 AVEVIQEYEKTLRDELDLRVEMANAIKLRENFLDSPMLYIPKMYEAFCHKNVIVMERIYG 250
Query: 334 ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHP 393
+D+ +L +G+ L L +GV+ Q+ HAD HP
Sbjct: 251 IPVSDVETLQR----NGTDMKL-------------LAERGVQVFFTQVFRDSFFHADMHP 293
Query: 394 GNL----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVR 449
GN+ Y + Q +D G++ ++ + + S V N D++ + +
Sbjct: 294 GNIFVNPHYPENPQYIGIDCGIVGKLNESDKRYLAESFVAFFNRDYRRVAQMHVDAGWTP 353
Query: 450 PGTNTLRVTMDLEDALGEVE---FKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLR 506
TN D E A EV F + ++ F++VL ++++A +++ ++ P L+ +
Sbjct: 354 QDTN----IDDFEQAFREVCEPIFAKPLSEISFAQVLLNLFNVAREFNMQVQPQLVLLQK 409
Query: 507 SLASLEGLAIAGDPHFKTFEAAYPFVIQKLLTEN 540
+L +EGL P ++ A PF +Q L E
Sbjct: 410 TLLYIEGLGRQLYPQLDLWDTAKPF-LQNWLNEQ 442
>sp|Q8Y275|UBIB_RALSO Probable ubiquinone biosynthesis protein UbiB OS=Ralstonia
solanacearum (strain GMI1000) GN=ubiB PE=3 SV=1
Length = 525
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 175/385 (45%), Gaps = 34/385 (8%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ D++ L++L D++PPF IA I+E LG P+ + F PVA+
Sbjct: 68 GQVLSTRRDLLPPDVADELAKLQDRVPPFDPKIAAAIVERSLGKPLSALFHRFDHHPVAS 127
Query: 221 ASFGQVY----RGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDL-- 274
AS QV+ RG DG VAVKV RP + V+ D+ ++R ++K+ L
Sbjct: 128 ASIAQVHFATLRGGPDDGREVAVKVLRPGMLPVIDSDLALMRDVATWMEKLWADGKRLKP 187
Query: 275 RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 334
R E K L ELD EAANAS+ + + + + VP+VF V ME M G
Sbjct: 188 REVVAEFDKYLHDELDLMREAANASQLRRNFAKSELLLVPEVFWDWCTSEVFVMERMHGV 247
Query: 335 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPG 394
+S + G TH L GVE Q+ G HAD HPG
Sbjct: 248 R----VSHADELRAAGVDTH-------------KLARDGVEIFFTQVFRDGFFHADMHPG 290
Query: 395 NLRYT----SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 450
N+ + S G+ LDFG++ + + + + + D+ H + + V
Sbjct: 291 NILVSVAPESLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDY----HRVALLHVESG 346
Query: 451 GTNTLRVTMDLEDAL---GEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRS 507
+LE A+ E F + ++ VL +++ + +++ + P L+ ++
Sbjct: 347 WAPEETRVEELEGAIRACCEPYFDRPLGEISLGLVLMRLFQTSRRFNVEVQPQLVLLQKT 406
Query: 508 LASLEGLAIAGDPHFKTFEAAYPFV 532
L ++EGL DP ++ A PF+
Sbjct: 407 LLNVEGLGRQLDPDLDLWKTAKPFL 431
>sp|A0KEF8|UBIB_AERHH Probable ubiquinone biosynthesis protein UbiB OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=ubiB PE=3 SV=1
Length = 546
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 27/380 (7%)
Query: 161 GQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA 220
GQ LSTR D++ DI++ L+ L D++PPF A + IE LG +E+ F E P+A+
Sbjct: 72 GQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARRQIEASLGCTIETLFDDFDETPLAS 131
Query: 221 ASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR--LY 277
AS QV+ +G + +KV RP++ V+ D+ +++ L+ + + LR
Sbjct: 132 ASIAQVHTARLKENGREIVIKVIRPDIEPVIEADLRLMQALARLVARFVPQSGRLRPIEV 191
Query: 278 ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT 337
+E K ++ EL+ EAANA + + + + ++VP+VF R++VL ME + G +
Sbjct: 192 VEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEVFTEHCREQVLVMERIYGIPVS 251
Query: 338 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLR 397
D+ +L +G++ L L +GVE Q+ HAD HPGN+
Sbjct: 252 DIAALEA----NGTNMKL-------------LAERGVEVFFTQVFRDSFFHADMHPGNIF 294
Query: 398 YTSSGQ-----IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT 452
+ IG +D G++ + R+ + + + + N D++ + E V P T
Sbjct: 295 VSYEHPENPLWIG-IDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDT 353
Query: 453 NTLRVTMDLEDALGEVEFKDGIPDVKFSRVLGKIWSIALKYHFRMPPYYTLVLRSLASLE 512
+ L + F+ + ++ F VL +++ A +++ ++ P L+ ++L +E
Sbjct: 354 KVDEFEFAIRTVLEPI-FEKPLSEISFGHVLLNLFNTARRFNMQVQPQLVLLQKTLLYVE 412
Query: 513 GLAIAGDPHFKTFEAAYPFV 532
GL P ++ A P++
Sbjct: 413 GLGRQLYPQLDLWQTAKPYL 432
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,920,809
Number of Sequences: 539616
Number of extensions: 11740866
Number of successful extensions: 30469
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 29558
Number of HSP's gapped (non-prelim): 244
length of query: 771
length of database: 191,569,459
effective HSP length: 125
effective length of query: 646
effective length of database: 124,117,459
effective search space: 80179878514
effective search space used: 80179878514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)